BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2302 Length=80 Score E Sequences producing significant alignments: (Bits) Value gi|15609439|ref|NP_216818.1| hypothetical protein Rv2302 [Mycoba... 160 6e-38 gi|75766092|pdb|2A7Y|A Chain A, Solution Structure Of The Conser... 160 7e-38 gi|340627310|ref|YP_004745762.1| hypothetical protein MCAN_23281... 159 1e-37 gi|240172098|ref|ZP_04750757.1| hypothetical protein MkanA1_2247... 120 8e-26 gi|118470402|ref|YP_888635.1| hypothetical protein MSMEG_4361 [M... 108 3e-22 gi|126433718|ref|YP_001069409.1| hypothetical protein Mjls_1112 ... 99.8 1e-19 gi|119867153|ref|YP_937105.1| hypothetical protein Mkms_1101 [My... 99.4 1e-19 gi|240169272|ref|ZP_04747931.1| hypothetical protein MkanA1_0815... 93.6 8e-18 gi|289446116|ref|ZP_06435860.1| conserved hypothetical protein [... 93.6 9e-18 gi|15839967|ref|NP_335004.1| hypothetical protein MT0595 [Mycoba... 93.6 9e-18 gi|253797501|ref|YP_003030502.1| hypothetical protein TBMG_00574... 93.2 1e-17 gi|15607709|ref|NP_215083.1| hypothetical protein Rv0569 [Mycoba... 93.2 1e-17 gi|108798057|ref|YP_638254.1| hypothetical protein Mmcs_1084 [My... 92.8 1e-17 gi|296169088|ref|ZP_06850747.1| conserved hypothetical protein [... 77.4 6e-13 gi|302526803|ref|ZP_07279145.1| predicted protein [Streptomyces ... 75.9 2e-12 gi|326329315|ref|ZP_08195640.1| putative DNA-binding protein [No... 73.2 1e-11 gi|302526597|ref|ZP_07278939.1| conserved hypothetical protein [... 73.2 1e-11 gi|296270326|ref|YP_003652958.1| hypothetical protein Tbis_2359 ... 71.2 5e-11 gi|326330363|ref|ZP_08196673.1| putative DNA-binding protein [No... 70.9 6e-11 gi|119714551|ref|YP_921516.1| signal-transduction protein [Nocar... 69.3 2e-10 gi|297562553|ref|YP_003681527.1| hypothetical protein Ndas_3621 ... 67.0 9e-10 gi|271965557|ref|YP_003339753.1| hypothetical protein Sros_4102 ... 64.7 4e-09 gi|134099022|ref|YP_001104683.1| hypothetical protein SACE_2460 ... 64.3 5e-09 gi|269125889|ref|YP_003299259.1| hypothetical protein Tcur_1645 ... 64.3 6e-09 gi|116670881|ref|YP_831814.1| hypothetical protein Arth_2334 [Ar... 62.0 3e-08 gi|294811648|ref|ZP_06770291.1| DUF1918 domain-containing protei... 62.0 3e-08 gi|326440168|ref|ZP_08214902.1| hypothetical protein SclaA2_0383... 61.2 4e-08 gi|158318670|ref|YP_001511178.1| signal-transduction protein [Fr... 61.2 5e-08 gi|345010558|ref|YP_004812912.1| hypothetical protein Strvi_2935... 60.5 8e-08 gi|269955704|ref|YP_003325493.1| hypothetical protein Xcel_0903 ... 60.5 9e-08 gi|291006881|ref|ZP_06564854.1| hypothetical protein SeryN2_2036... 60.1 1e-07 gi|258652659|ref|YP_003201815.1| hypothetical protein Namu_2457 ... 59.7 1e-07 gi|86743177|ref|YP_483577.1| signal-transduction protein [Franki... 59.7 1e-07 gi|167966535|ref|ZP_02548812.1| hypothetical protein MtubH3_0009... 59.3 2e-07 gi|158311979|ref|YP_001504487.1| hypothetical protein Franean1_0... 58.9 2e-07 gi|290961745|ref|YP_003492927.1| hypothetical protein SCAB_74091... 58.9 2e-07 gi|297155919|gb|ADI05631.1| hypothetical protein SBI_02510 [Stre... 58.5 3e-07 gi|134103069|ref|YP_001108730.1| hypothetical protein SACE_6639 ... 58.5 3e-07 gi|328881231|emb|CCA54470.1| hypothetical protein SVEN_1183 [Str... 58.2 4e-07 gi|229490411|ref|ZP_04384252.1| conserved hypothetical protein [... 58.2 4e-07 gi|226307003|ref|YP_002766963.1| hypothetical protein RER_35160 ... 58.2 4e-07 gi|297195417|ref|ZP_06912815.1| conserved hypothetical protein [... 57.8 5e-07 gi|256380476|ref|YP_003104136.1| hypothetical protein Amir_6489 ... 57.4 6e-07 gi|337763623|emb|CCB72333.1| conserved protein of unknown functi... 57.4 8e-07 gi|220912811|ref|YP_002488120.1| hypothetical protein Achl_2057 ... 57.4 8e-07 gi|111221086|ref|YP_711880.1| hypothetical protein FRAAL1636 [Fr... 57.0 9e-07 gi|288916649|ref|ZP_06411024.1| protein of unknown function DUF1... 57.0 9e-07 gi|302541281|ref|ZP_07293623.1| conserved hypothetical protein [... 57.0 9e-07 gi|317126431|ref|YP_004100543.1| hypothetical protein Intca_3333... 57.0 9e-07 gi|86743127|ref|YP_483527.1| hypothetical protein Francci3_4452 ... 57.0 1e-06 >gi|15609439|ref|NP_216818.1| hypothetical protein Rv2302 [Mycobacterium tuberculosis H37Rv] gi|15841793|ref|NP_336830.1| hypothetical protein MT2359 [Mycobacterium tuberculosis CDC1551] gi|31793480|ref|NP_855973.1| hypothetical protein Mb2324 [Mycobacterium bovis AF2122/97] 78 more sequence titles Length=80 Score = 160 bits (405), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 80/80 (100%), Positives = 80/80 (100%), Gaps = 0/80 (0%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT 60 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT Sbjct 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT 60 Query 61 ATEHAEAEKRAAARAGHAAT 80 ATEHAEAEKRAAARAGHAAT Sbjct 61 ATEHAEAEKRAAARAGHAAT 80 >gi|75766092|pdb|2A7Y|A Chain A, Solution Structure Of The Conserved Hypothetical Protein Rv2302 From The Bacterium Mycobacterium Tuberculosis Length=83 Score = 160 bits (404), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 80/80 (100%), Positives = 80/80 (100%), Gaps = 0/80 (0%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT 60 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT Sbjct 4 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT 63 Query 61 ATEHAEAEKRAAARAGHAAT 80 ATEHAEAEKRAAARAGHAAT Sbjct 64 ATEHAEAEKRAAARAGHAAT 83 >gi|340627310|ref|YP_004745762.1| hypothetical protein MCAN_23281 [Mycobacterium canettii CIPT 140010059] gi|340005500|emb|CCC44660.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=80 Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 79/80 (99%), Positives = 80/80 (100%), Gaps = 0/80 (0%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT 60 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGH+TTVYPGSDAVVVT Sbjct 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHQTTVYPGSDAVVVT 60 Query 61 ATEHAEAEKRAAARAGHAAT 80 ATEHAEAEKRAAARAGHAAT Sbjct 61 ATEHAEAEKRAAARAGHAAT 80 >gi|240172098|ref|ZP_04750757.1| hypothetical protein MkanA1_22470 [Mycobacterium kansasii ATCC 12478] Length=80 Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 58/66 (88%), Positives = 59/66 (90%), Gaps = 0/66 (0%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT 60 M AKVGDYLVVKGTTTERHDQHAEI EVRS DGSPPYVVRWLV GHE TVYPGSDAVVV+ Sbjct 1 MKAKVGDYLVVKGTTTERHDQHAEITEVRSQDGSPPYVVRWLVTGHEATVYPGSDAVVVS 60 Query 61 ATEHAE 66 A EH E Sbjct 61 AAEHEE 66 >gi|118470402|ref|YP_888635.1| hypothetical protein MSMEG_4361 [Mycobacterium smegmatis str. MC2 155] gi|118171689|gb|ABK72585.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=80 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 49/70 (70%), Positives = 58/70 (83%), Gaps = 0/70 (0%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT 60 M AKVGD+LVVKG TT+RHDQHAEII VRS DGSPP+VVRWL +GHE TVYPG DA++++ Sbjct 1 MKAKVGDFLVVKGATTDRHDQHAEIIGVRSDDGSPPFVVRWLSDGHEATVYPGPDALIMS 60 Query 61 ATEHAEAEKR 70 EH A +R Sbjct 61 PEEHQRATER 70 >gi|126433718|ref|YP_001069409.1| hypothetical protein Mjls_1112 [Mycobacterium sp. JLS] gi|126233518|gb|ABN96918.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=93 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 48/76 (64%), Positives = 57/76 (75%), Gaps = 0/76 (0%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT 60 M AKVGD+LV+KGTT +RHDQ I EV S DGSPPYVVRWL + H TV+PG DAVV+T Sbjct 6 MKAKVGDWLVIKGTTVDRHDQRGLITEVHSEDGSPPYVVRWLDSDHLATVFPGPDAVVLT 65 Query 61 ATEHAEAEKRAAARAG 76 A E A++RA+ R G Sbjct 66 ADEQHAADERASRRFG 81 >gi|119867153|ref|YP_937105.1| hypothetical protein Mkms_1101 [Mycobacterium sp. KMS] gi|119693242|gb|ABL90315.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=88 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 48/76 (64%), Positives = 57/76 (75%), Gaps = 0/76 (0%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT 60 M AKVGD+LV+KGTT +RHDQ I EV S DGSPPYVVRWL + H TV+PG DAVV+T Sbjct 1 MKAKVGDWLVIKGTTVDRHDQRGLITEVHSEDGSPPYVVRWLDSDHLATVFPGPDAVVLT 60 Query 61 ATEHAEAEKRAAARAG 76 A E A++RA+ R G Sbjct 61 ADEQHAADERASRRFG 76 >gi|240169272|ref|ZP_04747931.1| hypothetical protein MkanA1_08159 [Mycobacterium kansasii ATCC 12478] Length=90 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 48/76 (64%), Positives = 53/76 (70%), Gaps = 0/76 (0%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT 60 M A VGD+LV+KGTT +R D IIEV SADGSPPYVVRWL H TV PG DAVVVT Sbjct 3 MKANVGDWLVIKGTTIDRPDHRGLIIEVHSADGSPPYVVRWLDTDHVATVVPGPDAVVVT 62 Query 61 ATEHAEAEKRAAARAG 76 A E A++RA R G Sbjct 63 AAEQKAADERAQHRFG 78 >gi|289446116|ref|ZP_06435860.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289419074|gb|EFD16275.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|328457286|gb|AEB02709.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 4207] Length=127 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 47/76 (62%), Positives = 54/76 (72%), Gaps = 0/76 (0%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT 60 M AKVGD+LV+KG T ++ D IIEVRS+DGSPPYVVRWL H TV PG DAVVVT Sbjct 40 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 99 Query 61 ATEHAEAEKRAAARAG 76 A E A++RA R G Sbjct 100 AEEQNAADERAQHRFG 115 >gi|15839967|ref|NP_335004.1| hypothetical protein MT0595 [Mycobacterium tuberculosis CDC1551] gi|289749068|ref|ZP_06508446.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|13880108|gb|AAK44818.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|289689655|gb|EFD57084.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] Length=134 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 47/76 (62%), Positives = 54/76 (72%), Gaps = 0/76 (0%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT 60 M AKVGD+LV+KG T ++ D IIEVRS+DGSPPYVVRWL H TV PG DAVVVT Sbjct 47 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 106 Query 61 ATEHAEAEKRAAARAG 76 A E A++RA R G Sbjct 107 AEEQNAADERAQHRFG 122 >gi|253797501|ref|YP_003030502.1| hypothetical protein TBMG_00574 [Mycobacterium tuberculosis KZN 1435] gi|289552821|ref|ZP_06442031.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|308374047|ref|ZP_07434619.2| hypothetical protein TMFG_01871 [Mycobacterium tuberculosis SUMu006] gi|253319004|gb|ACT23607.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 1435] gi|289437453|gb|EFD19946.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|308343262|gb|EFP32113.1| hypothetical protein TMFG_01871 [Mycobacterium tuberculosis SUMu006] Length=111 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 47/76 (62%), Positives = 54/76 (72%), Gaps = 0/76 (0%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT 60 M AKVGD+LV+KG T ++ D IIEVRS+DGSPPYVVRWL H TV PG DAVVVT Sbjct 24 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 83 Query 61 ATEHAEAEKRAAARAG 76 A E A++RA R G Sbjct 84 AEEQNAADERAQHRFG 99 >gi|15607709|ref|NP_215083.1| hypothetical protein Rv0569 [Mycobacterium tuberculosis H37Rv] gi|31791751|ref|NP_854244.1| hypothetical protein Mb0584 [Mycobacterium bovis AF2122/97] gi|121636487|ref|YP_976710.1| hypothetical protein BCG_0614 [Mycobacterium bovis BCG str. Pasteur 1173P2] 65 more sequence titles Length=88 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 47/76 (62%), Positives = 54/76 (72%), Gaps = 0/76 (0%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT 60 M AKVGD+LV+KG T ++ D IIEVRS+DGSPPYVVRWL H TV PG DAVVVT Sbjct 1 MKAKVGDWLVIKGATIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVVT 60 Query 61 ATEHAEAEKRAAARAG 76 A E A++RA R G Sbjct 61 AEEQNAADERAQHRFG 76 >gi|108798057|ref|YP_638254.1| hypothetical protein Mmcs_1084 [Mycobacterium sp. MCS] gi|108768476|gb|ABG07198.1| conserved hypothetical protein [Mycobacterium sp. MCS] Length=84 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 44/72 (62%), Positives = 54/72 (75%), Gaps = 0/72 (0%) Query 5 VGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVTATEH 64 +GD+LV+KGTT +RHDQ I EV S DGSPPYVVRWL + H TV+PG DAVV+TA E Sbjct 1 MGDWLVIKGTTVDRHDQRGLITEVHSEDGSPPYVVRWLDSDHLATVFPGPDAVVLTADEQ 60 Query 65 AEAEKRAAARAG 76 A++RA+ R G Sbjct 61 HAADERASRRFG 72 >gi|296169088|ref|ZP_06850747.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896208|gb|EFG75870.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=90 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 38/74 (52%), Positives = 48/74 (65%), Gaps = 0/74 (0%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT 60 ++A GD+LV+K T R D I V SA+G PPY VRWL G E TV+PG DA+VVT Sbjct 2 VNAHAGDWLVIKSATIGRPDLRGLITSVGSAEGEPPYHVRWLATGEEATVFPGPDAIVVT 61 Query 61 ATEHAEAEKRAAAR 74 A E A++RA +R Sbjct 62 AAEQQAADERARSR 75 >gi|302526803|ref|ZP_07279145.1| predicted protein [Streptomyces sp. AA4] gi|302435698|gb|EFL07514.1| predicted protein [Streptomyces sp. AA4] Length=88 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 35/76 (47%), Positives = 50/76 (66%), Gaps = 5/76 (6%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT 60 M A+ GD+LVVK TE D+H ++ + DG PP+ VRW + G+ +T++PG DAVV+T Sbjct 1 MRAQPGDWLVVKSGRTEVPDRHGRVVATGTPDGGPPFTVRWFLGGYVSTIFPGPDAVVLT 60 Query 61 ATEHAEAEKRAAARAG 76 EA++RAAA G Sbjct 61 -----EAQRRAAAPNG 71 >gi|326329315|ref|ZP_08195640.1| putative DNA-binding protein [Nocardioidaceae bacterium Broad-1] gi|325952890|gb|EGD44905.1| putative DNA-binding protein [Nocardioidaceae bacterium Broad-1] Length=72 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 40/68 (59%), Positives = 45/68 (67%), Gaps = 4/68 (5%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT 60 M+A VGD LVV+G + AEI+EVR DGSPPYVVRW NGHE V+PGSDA V Sbjct 2 MYAAVGDRLVVRGHNVGEPVRDAEILEVRHDDGSPPYVVRWSDNGHEALVFPGSDAFV-- 59 Query 61 ATEHAEAE 68 EH E E Sbjct 60 --EHFEHE 65 >gi|302526597|ref|ZP_07278939.1| conserved hypothetical protein [Streptomyces sp. AA4] gi|302435492|gb|EFL07308.1| conserved hypothetical protein [Streptomyces sp. AA4] Length=89 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 34/74 (46%), Positives = 49/74 (67%), Gaps = 0/74 (0%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT 60 MHA+ GD+LVVKG + + I+ V S DG+PP+ VRWL H++TV+PG DA+V+T Sbjct 1 MHAQRGDWLVVKGIHVDVPEHRGRIVAVGSPDGAPPFTVRWLGADHDSTVFPGPDAIVLT 60 Query 61 ATEHAEAEKRAAAR 74 E A +++A R Sbjct 61 DDELAAQDQQARER 74 >gi|296270326|ref|YP_003652958.1| hypothetical protein Tbis_2359 [Thermobispora bispora DSM 43833] gi|296093113|gb|ADG89065.1| Domain of unknown function DUF1918 [Thermobispora bispora DSM 43833] Length=69 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 33/61 (55%), Positives = 43/61 (71%), Gaps = 1/61 (1%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT 60 M A+VGD LVV G+ H + EIIEVR +DG PPY+VR+ +GHE V+PG DA+V+ Sbjct 1 MQAQVGDRLVVHGSVVGEHGKEGEIIEVRGSDGRPPYLVRYE-DGHEALVFPGPDAIVIP 59 Query 61 A 61 A Sbjct 60 A 60 >gi|326330363|ref|ZP_08196673.1| putative DNA-binding protein [Nocardioidaceae bacterium Broad-1] gi|325951900|gb|EGD43930.1| putative DNA-binding protein [Nocardioidaceae bacterium Broad-1] Length=63 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 35/62 (57%), Positives = 43/62 (70%), Gaps = 0/62 (0%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT 60 MHA VGD+LVV GT H + AEIIEV DGSPPY+VRW + HE+ V+PG DA + Sbjct 1 MHASVGDHLVVAGTHVGDHVREAEIIEVSHPDGSPPYLVRWSDSDHESLVFPGPDAHIEP 60 Query 61 AT 62 A+ Sbjct 61 AS 62 >gi|119714551|ref|YP_921516.1| signal-transduction protein [Nocardioides sp. JS614] gi|119535212|gb|ABL79829.1| putative signal-transduction protein with CBS domains [Nocardioides sp. JS614] Length=68 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/58 (57%), Positives = 39/58 (68%), Gaps = 0/58 (0%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVV 58 MHA GD+LV+ GT + EI+EVR DG+PPYVVRW NGHE+ YPG DA V Sbjct 1 MHATKGDHLVIHGTHVGEPLRDGEIVEVRGPDGAPPYVVRWADNGHESLTYPGPDAEV 58 >gi|297562553|ref|YP_003681527.1| hypothetical protein Ndas_3621 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847001|gb|ADH69021.1| Domain of unknown function DUF1918 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length=63 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 35/62 (57%), Positives = 41/62 (67%), Gaps = 1/62 (1%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT 60 MHA VGD + V+ T D E+IEVR +DG PPYVVR +G ET +YPG DAVVV Sbjct 1 MHASVGDRIHVRDRGTSTEDWAGEVIEVRGSDGGPPYVVR-FPDGRETLIYPGPDAVVVP 59 Query 61 AT 62 AT Sbjct 60 AT 61 >gi|271965557|ref|YP_003339753.1| hypothetical protein Sros_4102 [Streptosporangium roseum DSM 43021] gi|270508732|gb|ACZ87010.1| hypothetical protein Sros_4102 [Streptosporangium roseum DSM 43021] Length=77 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 32/73 (44%), Positives = 44/73 (61%), Gaps = 0/73 (0%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT 60 M A +GD L+V+GT + I+E+R DGSPPYVVRW+ HE+ V+PG DA V+T Sbjct 1 MKASIGDKLIVEGTRHGEVRRVGVIVELRHPDGSPPYVVRWMGADHESLVFPGPDAHVMT 60 Query 61 ATEHAEAEKRAAA 73 + E+ A Sbjct 61 GGNLPDEERNRAP 73 >gi|134099022|ref|YP_001104683.1| hypothetical protein SACE_2460 [Saccharopolyspora erythraea NRRL 2338] gi|133911645|emb|CAM01758.1| hypothetical protein SACE_2460 [Saccharopolyspora erythraea NRRL 2338] Length=80 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 31/78 (40%), Positives = 44/78 (57%), Gaps = 3/78 (3%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT 60 M A+VGD+L+V+G + H + +I EVR DG PPY+V WL +GH + +PG D Sbjct 1 MRAQVGDWLIVEGVHLDDHRRKGQITEVRGPDGEPPYMVHWLDDGHVSLFFPGPDTHAEK 60 Query 61 ATEHAEAEKRAAARAGHA 78 + H + RA HA Sbjct 61 SLPH---HLKLPPRASHA 75 >gi|269125889|ref|YP_003299259.1| hypothetical protein Tcur_1645 [Thermomonospora curvata DSM 43183] gi|268310847|gb|ACY97221.1| Domain of unknown function DUF1918 [Thermomonospora curvata DSM 43183] Length=74 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 33/75 (44%), Positives = 44/75 (59%), Gaps = 1/75 (1%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT 60 M A VGD L V+G + D+ EIIEVR +G PPYVVR+ +GH V+PG DAVV + Sbjct 1 MQASVGDRLHVRGNAVGQPDRSGEIIEVRGGEGGPPYVVRFD-DGHTGLVFPGPDAVVES 59 Query 61 ATEHAEAEKRAAARA 75 + + R R+ Sbjct 60 PRKASRKTGRVPQRS 74 >gi|116670881|ref|YP_831814.1| hypothetical protein Arth_2334 [Arthrobacter sp. FB24] gi|116610990|gb|ABK03714.1| hypothetical protein Arth_2334 [Arthrobacter sp. FB24] Length=63 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/58 (54%), Positives = 40/58 (69%), Gaps = 1/58 (1%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVV 58 M A GD + ++G T ++H +IIEV ADG+PPYVVR+ +GHETTV PG D VV Sbjct 1 MKATQGDRITIRGKTVGSAERHGQIIEVHGADGAPPYVVRFD-DGHETTVIPGGDFVV 57 >gi|294811648|ref|ZP_06770291.1| DUF1918 domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|294324247|gb|EFG05890.1| DUF1918 domain-containing protein [Streptomyces clavuligerus ATCC 27064] Length=70 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/58 (54%), Positives = 40/58 (69%), Gaps = 1/58 (1%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVV 58 M A VGD L+V G T +HD+ AE++EV +GSPPY VR+ +GHET + PG D VV Sbjct 8 MEASVGDKLLVHGRTVGQHDRIAEVVEVLGPEGSPPYRVRF-EDGHETVMSPGPDCVV 64 >gi|326440168|ref|ZP_08214902.1| hypothetical protein SclaA2_03834 [Streptomyces clavuligerus ATCC 27064] Length=63 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 31/58 (54%), Positives = 40/58 (69%), Gaps = 1/58 (1%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVV 58 M A VGD L+V G T +HD+ AE++EV +GSPPY VR+ +GHET + PG D VV Sbjct 1 MEASVGDKLLVHGRTVGQHDRIAEVVEVLGPEGSPPYRVRFE-DGHETVMSPGPDCVV 57 >gi|158318670|ref|YP_001511178.1| signal-transduction protein [Frankia sp. EAN1pec] gi|158114075|gb|ABW16272.1| putative signal-transduction protein with CBS domains [Frankia sp. EAN1pec] Length=242 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 29/58 (50%), Positives = 37/58 (64%), Gaps = 0/58 (0%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVV 58 M A GD LVV ++T++ D+ EI EVRS G PP+ VRW GH + +YPG DA V Sbjct 173 MRAAPGDTLVVHRSSTQQSDRTGEIFEVRSPAGDPPFAVRWSDTGHVSFIYPGPDAEV 230 >gi|345010558|ref|YP_004812912.1| hypothetical protein Strvi_2935 [Streptomyces violaceusniger Tu 4113] gi|344036907|gb|AEM82632.1| Domain of unknown function DUF1918 [Streptomyces violaceusniger Tu 4113] Length=68 Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 31/58 (54%), Positives = 36/58 (63%), Gaps = 0/58 (0%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVV 58 M A VGD L+V G HD+ AEIIEV DG PPY VR+ +GHE PG D+VV Sbjct 1 MEATVGDKLLVHGRVVGIHDRVAEIIEVLGTDGEPPYRVRYEDDGHECLFSPGPDSVV 58 >gi|269955704|ref|YP_003325493.1| hypothetical protein Xcel_0903 [Xylanimonas cellulosilytica DSM 15894] gi|269304385|gb|ACZ29935.1| Domain of unknown function DUF1918 [Xylanimonas cellulosilytica DSM 15894] Length=160 Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 33/69 (48%), Positives = 40/69 (58%), Gaps = 1/69 (1%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT 60 M AKVGD +V + +H EI V ADG+PPY VRW G E+ V+PGSD VV Sbjct 1 MKAKVGDRIVRASGKVDGAVRHGEITGVERADGTPPYRVRWQDTGEESLVFPGSDCVVAP 60 Query 61 ATEHAEAEK 69 E AEA + Sbjct 61 G-EPAEAPQ 68 >gi|291006881|ref|ZP_06564854.1| hypothetical protein SeryN2_20368 [Saccharopolyspora erythraea NRRL 2338] Length=76 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/74 (38%), Positives = 41/74 (56%), Gaps = 3/74 (4%) Query 5 VGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVTATEH 64 +GD+L+V+G + H + +I EVR DG PPY+V WL +GH + +PG D + H Sbjct 1 MGDWLIVEGVHLDDHRRKGQITEVRGPDGEPPYMVHWLDDGHVSLFFPGPDTHAEKSLPH 60 Query 65 AEAEKRAAARAGHA 78 + RA HA Sbjct 61 ---HLKLPPRASHA 71 >gi|258652659|ref|YP_003201815.1| hypothetical protein Namu_2457 [Nakamurella multipartita DSM 44233] gi|258555884|gb|ACV78826.1| Domain of unknown function DUF1918 [Nakamurella multipartita DSM 44233] Length=88 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/73 (44%), Positives = 42/73 (58%), Gaps = 2/73 (2%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT 60 M A+ GD+LVV RHD+ AEI+ DG PP+ VRW + HE +PG D+ ++T Sbjct 1 MKAQPGDWLVVHSHIEGRHDRRAEILAT-GPDGEPPFTVRWTDDEHEGLFFPGPDSQILT 59 Query 61 ATEHAEAEKRAAA 73 E A A RA A Sbjct 60 PAEQA-AHARAEA 71 >gi|86743177|ref|YP_483577.1| signal-transduction protein [Frankia sp. CcI3] gi|86570039|gb|ABD13848.1| putative signal-transduction protein with CBS domains [Frankia sp. CcI3] Length=236 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/67 (48%), Positives = 38/67 (57%), Gaps = 0/67 (0%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT 60 M A GD LVV T + D+ EI+EVRS G PP+ VRW GH + VYPG DA V Sbjct 167 MRAHPGDTLVVHRPTVTQPDRLGEILEVRSPAGDPPFTVRWSDTGHVSFVYPGPDAEVRH 226 Query 61 ATEHAEA 67 E A + Sbjct 227 PPEEARS 233 >gi|167966535|ref|ZP_02548812.1| hypothetical protein MtubH3_00092 [Mycobacterium tuberculosis H37Ra] Length=70 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/53 (57%), Positives = 34/53 (65%), Gaps = 0/53 (0%) Query 15 TTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVTATEHAEA 67 T ++ D IIEVRS+DGSPPYVVRWL H TV PG DAVV +T A Sbjct 8 TIDQPDHRGLIIEVRSSDGSPPYVVRWLETDHVATVIPGPDAVVAYSTPVGNA 60 >gi|158311979|ref|YP_001504487.1| hypothetical protein Franean1_0114 [Frankia sp. EAN1pec] gi|158107384|gb|ABW09581.1| Domain of unknown function DUF1918 [Frankia sp. EAN1pec] Length=68 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/69 (47%), Positives = 41/69 (60%), Gaps = 3/69 (4%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVV-- 58 M+A VGD VV G T ++H I EVR G PPY+VRW +GHE +PG+D+ + Sbjct 1 MYASVGDRFVVHGRTVGCPERHGVITEVRGVAGGPPYLVRW-DDGHEGLFFPGADSTIEL 59 Query 59 VTATEHAEA 67 A EHA A Sbjct 60 RPAREHARA 68 >gi|290961745|ref|YP_003492927.1| hypothetical protein SCAB_74091 [Streptomyces scabiei 87.22] gi|260651271|emb|CBG74393.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length=65 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/58 (50%), Positives = 37/58 (64%), Gaps = 0/58 (0%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVV 58 M A VGD L+V G T HD+ A ++EV DG+PPY VR+ +GHE + PG D VV Sbjct 1 MQAAVGDTLLVHGRTVGHHDRTARVLEVLGHDGNPPYRVRFEDDGHEALMSPGPDTVV 58 >gi|297155919|gb|ADI05631.1| hypothetical protein SBI_02510 [Streptomyces bingchenggensis BCW-1] Length=68 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 31/58 (54%), Positives = 37/58 (64%), Gaps = 0/58 (0%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVV 58 M A VGD L+V G HD+ AEIIEV G+PPY VR+ +GHE V PG D+VV Sbjct 1 MEATVGDKLLVHGRVVGIHDRTAEIIEVLGDHGTPPYRVRYEDDGHECLVSPGPDSVV 58 >gi|134103069|ref|YP_001108730.1| hypothetical protein SACE_6639 [Saccharopolyspora erythraea NRRL 2338] gi|291008977|ref|ZP_06566950.1| hypothetical protein SeryN2_31018 [Saccharopolyspora erythraea NRRL 2338] gi|133915692|emb|CAM05805.1| hypothetical protein SACE_6639 [Saccharopolyspora erythraea NRRL 2338] Length=64 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 29/58 (50%), Positives = 37/58 (64%), Gaps = 1/58 (1%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVV 58 M A VGD L V + DQ EI+EVR DG+PPY+VR+ +GH++ VYPG D V Sbjct 1 MKAAVGDQLHVHSKHVDEADQTGEILEVRGPDGAPPYLVRF-KDGHQSLVYPGGDCEV 57 >gi|328881231|emb|CCA54470.1| hypothetical protein SVEN_1183 [Streptomyces venezuelae ATCC 10712] Length=67 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 27/58 (47%), Positives = 38/58 (66%), Gaps = 0/58 (0%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVV 58 M A VGD L+V G T HD+ AE+++V +G+PPY V++ +GHE + PG D VV Sbjct 1 MQANVGDTLLVHGRTVGHHDRTAEVLQVLGENGTPPYRVKFEDDGHEALMSPGPDTVV 58 >gi|229490411|ref|ZP_04384252.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229322701|gb|EEN88481.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=64 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 29/58 (50%), Positives = 39/58 (68%), Gaps = 1/58 (1%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVV 58 MHA+VGD L V+G + + AE++EV DG PPY+VR+ NGHE V+PGSD + Sbjct 1 MHAEVGDRLHVQGRVVGQAEVTAEVLEVHGEDGGPPYLVRY-DNGHEALVFPGSDGWI 57 >gi|226307003|ref|YP_002766963.1| hypothetical protein RER_35160 [Rhodococcus erythropolis PR4] gi|226186120|dbj|BAH34224.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=65 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 29/58 (50%), Positives = 39/58 (68%), Gaps = 1/58 (1%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVV 58 MHA+VGD L V+G + + AE++EV DG PPY+VR+ NGHE V+PGSD + Sbjct 2 MHAEVGDRLHVQGRVVGQAEVTAEVLEVHGEDGGPPYLVRY-DNGHEALVFPGSDGWI 58 >gi|297195417|ref|ZP_06912815.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] gi|197719210|gb|EDY63118.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] Length=63 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 28/58 (49%), Positives = 40/58 (69%), Gaps = 1/58 (1%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVV 58 M A VGD L+V G T +HD+ AE++EV ++G+PP+ VR+ +GHE + PG D VV Sbjct 1 MQASVGDTLLVHGRTVGQHDKVAEVVEVLGSEGNPPFRVRF-EDGHEALLSPGPDTVV 57 >gi|256380476|ref|YP_003104136.1| hypothetical protein Amir_6489 [Actinosynnema mirum DSM 43827] gi|255924779|gb|ACU40290.1| Domain of unknown function DUF1918 [Actinosynnema mirum DSM 43827] Length=63 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 28/58 (49%), Positives = 39/58 (68%), Gaps = 1/58 (1%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVV 58 MHA VGD L V+G ++ +I+EVR +G+PPY+VR+ +GHE VYPG D +V Sbjct 1 MHATVGDELQVQGHVVGIQERIGKIVEVRGPEGAPPYLVRF-EDGHEGLVYPGPDCLV 57 >gi|337763623|emb|CCB72333.1| conserved protein of unknown function [Streptomyces cattleya NRRL 8057] Length=64 Score = 57.4 bits (137), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 28/58 (49%), Positives = 37/58 (64%), Gaps = 1/58 (1%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVV 58 M A VGD + + + EI+EVR ADG+PPYVVR+ +GHET ++PG D VV Sbjct 1 MRASVGDRIRIHTRAVGMKEPIGEIVEVRGADGAPPYVVRFD-DGHETLIFPGPDCVV 57 >gi|220912811|ref|YP_002488120.1| hypothetical protein Achl_2057 [Arthrobacter chlorophenolicus A6] gi|219859689|gb|ACL40031.1| Domain of unknown function DUF1918 [Arthrobacter chlorophenolicus A6] Length=63 Score = 57.4 bits (137), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 29/58 (50%), Positives = 37/58 (64%), Gaps = 1/58 (1%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVV 58 M A GD ++V G T D+H I+EVR G+PPYVVR+ +GHET +YPG D V Sbjct 1 MEAAQGDRIIVHGRTVGATDRHGVILEVRGEGGAPPYVVRFD-DGHETVMYPGGDFAV 57 >gi|111221086|ref|YP_711880.1| hypothetical protein FRAAL1636 [Frankia alni ACN14a] gi|111148618|emb|CAJ60291.1| hypothetical protein; putative CBS-domains [Frankia alni ACN14a] Length=266 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 30/57 (53%), Positives = 32/57 (57%), Gaps = 0/57 (0%) Query 2 HAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVV 58 A VGD LVV R EI+EV S G PPY+VRW GH T VYPG DA V Sbjct 197 RAAVGDRLVVSPPNPGRPPCGGEILEVHSPAGDPPYLVRWGDGGHATFVYPGPDAEV 253 >gi|288916649|ref|ZP_06411024.1| protein of unknown function DUF1918 [Frankia sp. EUN1f] gi|288351904|gb|EFC86106.1| protein of unknown function DUF1918 [Frankia sp. EUN1f] Length=68 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 27/58 (47%), Positives = 37/58 (64%), Gaps = 1/58 (1%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVV 58 M+A VGD VV G T ++H IIEVR G PP++VRW +GHE +PG+D+ + Sbjct 1 MYASVGDRFVVHGRTVGDPERHGVIIEVRGTAGGPPFMVRW-DDGHEGLFFPGADSNI 57 >gi|302541281|ref|ZP_07293623.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC 53653] gi|302458899|gb|EFL21992.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC 53653] Length=68 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 30/58 (52%), Positives = 35/58 (61%), Gaps = 0/58 (0%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVV 58 M A VGD L+V G HD+ AEIIEV G PPY VR+ +GHE PG D+VV Sbjct 1 MEATVGDKLLVHGRVVGVHDRTAEIIEVLGDHGEPPYRVRYEDDGHECLFSPGPDSVV 58 >gi|317126431|ref|YP_004100543.1| hypothetical protein Intca_3333 [Intrasporangium calvum DSM 43043] gi|315590519|gb|ADU49816.1| Domain of unknown function DUF1918 [Intrasporangium calvum DSM 43043] Length=186 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 25/62 (41%), Positives = 38/62 (62%), Gaps = 1/62 (1%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVT 60 M A+VGD +++ + + EI+E+R +G+PPY+VRW NGH +YPG AV+ Sbjct 1 MRARVGDRIILAAEHIDEPTRDGEILEIRGGEGAPPYLVRW-SNGHTGLIYPGPGAVLRL 59 Query 61 AT 62 T Sbjct 60 GT 61 >gi|86743127|ref|YP_483527.1| hypothetical protein Francci3_4452 [Frankia sp. CcI3] gi|86569989|gb|ABD13798.1| hypothetical protein Francci3_4452 [Frankia sp. CcI3] Length=91 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 26/58 (45%), Positives = 36/58 (63%), Gaps = 1/58 (1%) Query 1 MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVV 58 M A VG+ VV G T ++H ++EVR DG PP+VVRW +GHE +P D++V Sbjct 24 MFASVGERFVVHGRTVGSPERHGTVVEVRGEDGGPPFVVRW-DDGHEGLFFPSYDSLV 80 Lambda K H 0.313 0.126 0.367 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 128850890930 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40