BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2305 Length=429 Score E Sequences producing significant alignments: (Bits) Value gi|15609442|ref|NP_216821.1| hypothetical protein Rv2305 [Mycoba... 848 0.0 gi|289447938|ref|ZP_06437682.1| conserved hypothetical protein [... 847 0.0 gi|340627313|ref|YP_004745765.1| hypothetical protein MCAN_23311... 847 0.0 gi|31793483|ref|NP_855976.1| hypothetical protein Mb2327 [Mycoba... 846 0.0 gi|289762466|ref|ZP_06521844.1| conserved hypothetical protein [... 577 2e-162 gi|294816168|ref|ZP_06774811.1| Condensation domain protein [Str... 87.0 5e-15 gi|29832277|ref|NP_826911.1| hypothetical protein SAV_5734 [Stre... 77.4 4e-12 gi|291439825|ref|ZP_06579215.1| conserved hypothetical protein [... 73.9 5e-11 gi|158312449|ref|YP_001504957.1| condensation domain-containing ... 71.2 3e-10 gi|111221309|ref|YP_712103.1| hypothetical protein FRAAL1869 [Fr... 70.9 5e-10 gi|297199450|ref|ZP_06916847.1| conserved hypothetical protein [... 70.5 6e-10 gi|302551175|ref|ZP_07303517.1| conserved hypothetical protein [... 65.9 1e-08 gi|116871852|ref|YP_848633.1| hypothetical protein lwe0432 [List... 65.1 2e-08 gi|315301512|ref|ZP_07872647.1| putative siderophore/Surfactin s... 64.7 3e-08 gi|326780920|ref|ZP_08240185.1| condensation domain protein [Str... 63.5 6e-08 gi|182440258|ref|YP_001827977.1| hypothetical protein SGR_6465 [... 63.5 7e-08 gi|239985945|ref|ZP_04706609.1| hypothetical protein SrosN1_0142... 62.4 1e-07 gi|325109285|ref|YP_004270353.1| condensation domain protein [Pl... 59.3 1e-06 gi|315281004|ref|ZP_07869744.1| conserved hypothetical protein [... 58.9 2e-06 gi|289433741|ref|YP_003463613.1| hypothetical protein lse_0374 [... 58.9 2e-06 gi|46906693|ref|YP_013082.1| hypothetical protein LMOf2365_0476 ... 58.5 2e-06 gi|290960732|ref|YP_003491914.1| hypothetical protein SCAB_63651... 57.4 4e-06 gi|284800725|ref|YP_003412590.1| hypothetical protein LM5578_047... 56.6 8e-06 gi|254830567|ref|ZP_05235222.1| hypothetical protein Lmon1_04372... 56.2 9e-06 gi|302545684|ref|ZP_07298026.1| conserved hypothetical protein [... 56.2 9e-06 gi|16802483|ref|NP_463968.1| hypothetical protein lmo0439 [Liste... 56.2 9e-06 gi|255030182|ref|ZP_05302133.1| hypothetical protein LmonL_15841... 56.2 1e-05 gi|291442887|ref|ZP_06582277.1| conserved hypothetical protein [... 56.2 1e-05 gi|217965460|ref|YP_002351138.1| hypothetical protein LMHCC_2186... 55.8 1e-05 gi|224499978|ref|ZP_03668327.1| hypothetical protein LmonF1_1000... 55.8 1e-05 gi|226223070|ref|YP_002757177.1| module of peptide synthetase [L... 55.5 2e-05 gi|47092507|ref|ZP_00230296.1| conserved hypothetical protein [L... 55.1 3e-05 gi|220928641|ref|YP_002505550.1| condensation domain-containing ... 54.7 3e-05 gi|313634859|gb|EFS01271.1| putative condensation protein [Liste... 54.7 3e-05 gi|254828928|ref|ZP_05233615.1| conserved hypothetical protein [... 54.7 3e-05 gi|313620488|gb|EFR91856.1| conserved hypothetical protein [List... 54.3 4e-05 gi|16799536|ref|NP_469804.1| hypothetical protein lin0460 [Liste... 53.9 5e-05 gi|327543447|gb|EGF29869.1| protein containing Condensation doma... 52.8 1e-04 gi|313610662|gb|EFR85732.1| putative condensation protein [Liste... 52.0 2e-04 gi|313625044|gb|EFR94925.1| conserved hypothetical protein [List... 52.0 2e-04 gi|327542335|gb|EGF28822.1| hypothetical protein RBWH47_05226 [R... 51.6 2e-04 gi|47096462|ref|ZP_00234055.1| conserved hypothetical protein [L... 51.6 3e-04 gi|255016955|ref|ZP_05289081.1| hypothetical protein LmonF_02383... 51.6 3e-04 gi|32475996|ref|NP_868990.1| hypothetical protein RB9631 [Rhodop... 51.2 3e-04 gi|339010005|ref|ZP_08642576.1| putative linear gramicidin synth... 50.1 7e-04 gi|121717280|ref|XP_001276062.1| nonribosomal peptide synthase, ... 49.7 0.001 gi|32476214|ref|NP_869208.1| hypothetical protein RB10038 [Rhodo... 48.9 0.002 gi|290892401|ref|ZP_06555395.1| conserved hypothetical protein [... 48.5 0.002 gi|336177511|ref|YP_004582886.1| condensation domain-containing ... 47.8 0.004 gi|126178848|ref|YP_001046813.1| condensation domain-containing ... 47.8 0.004 >gi|15609442|ref|NP_216821.1| hypothetical protein Rv2305 [Mycobacterium tuberculosis H37Rv] gi|15841797|ref|NP_336834.1| hypothetical protein MT2362 [Mycobacterium tuberculosis CDC1551] gi|148662127|ref|YP_001283650.1| hypothetical protein MRA_2321 [Mycobacterium tuberculosis H37Ra] 64 more sequence titles Length=429 Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust. Identities = 429/429 (100%), Positives = 429/429 (100%), Gaps = 0/429 (0%) Query 1 MTQTLRLTALDEMFITDDIDIVPSVQIEARVSGRFDLDRLAAALRAAVAKHALARARLGR 60 MTQTLRLTALDEMFITDDIDIVPSVQIEARVSGRFDLDRLAAALRAAVAKHALARARLGR Sbjct 1 MTQTLRLTALDEMFITDDIDIVPSVQIEARVSGRFDLDRLAAALRAAVAKHALARARLGR 60 Query 61 ASLTARTLYWEVPDRADHLAVEITDEPVGEVRSRFYARAPELHRSPVFAVAVVRETVGDR 120 ASLTARTLYWEVPDRADHLAVEITDEPVGEVRSRFYARAPELHRSPVFAVAVVRETVGDR Sbjct 61 ASLTARTLYWEVPDRADHLAVEITDEPVGEVRSRFYARAPELHRSPVFAVAVVRETVGDR 120 Query 121 LLLNFHHAAFDGMGGLRLLLSLARAYAGEPDEVGGPPIEEARNLKGVAGSRDLFDVLIRA 180 LLLNFHHAAFDGMGGLRLLLSLARAYAGEPDEVGGPPIEEARNLKGVAGSRDLFDVLIRA Sbjct 121 LLLNFHHAAFDGMGGLRLLLSLARAYAGEPDEVGGPPIEEARNLKGVAGSRDLFDVLIRA 180 Query 181 RGLAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLTIESDEMATAVARRPEGATVNDLAMAA 240 RGLAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLTIESDEMATAVARRPEGATVNDLAMAA Sbjct 181 RGLAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLTIESDEMATAVARRPEGATVNDLAMAA 240 Query 241 LALTILQWNRTHDVPAADSVSVNMPVNFRPTAWSTEVISNFASYLAIVLRVDEVTDLEKA 300 LALTILQWNRTHDVPAADSVSVNMPVNFRPTAWSTEVISNFASYLAIVLRVDEVTDLEKA Sbjct 241 LALTILQWNRTHDVPAADSVSVNMPVNFRPTAWSTEVISNFASYLAIVLRVDEVTDLEKA 300 Query 301 TAIVAGITGPLKQSGAAGWVVDLLEGGKVLPAMLKRQLQLLLPLVEDRFVESVCLSNLGR 360 TAIVAGITGPLKQSGAAGWVVDLLEGGKVLPAMLKRQLQLLLPLVEDRFVESVCLSNLGR Sbjct 301 TAIVAGITGPLKQSGAAGWVVDLLEGGKVLPAMLKRQLQLLLPLVEDRFVESVCLSNLGR 360 Query 361 VDVPAFGGEAGDTTEVWFSPTAAMSVMPIGVGLVGFGGTLRAMFRGDGRTIGGEALGRFA 420 VDVPAFGGEAGDTTEVWFSPTAAMSVMPIGVGLVGFGGTLRAMFRGDGRTIGGEALGRFA Sbjct 361 VDVPAFGGEAGDTTEVWFSPTAAMSVMPIGVGLVGFGGTLRAMFRGDGRTIGGEALGRFA 420 Query 421 ALYRDTLLT 429 ALYRDTLLT Sbjct 421 ALYRDTLLT 429 >gi|289447938|ref|ZP_06437682.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289420896|gb|EFD18097.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] Length=429 Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/429 (99%), Positives = 429/429 (100%), Gaps = 0/429 (0%) Query 1 MTQTLRLTALDEMFITDDIDIVPSVQIEARVSGRFDLDRLAAALRAAVAKHALARARLGR 60 MTQTLRLTALDEMFITDDIDIVPSVQIEARVSGRFDLDRLAAALRAAVAKHALARARLGR Sbjct 1 MTQTLRLTALDEMFITDDIDIVPSVQIEARVSGRFDLDRLAAALRAAVAKHALARARLGR 60 Query 61 ASLTARTLYWEVPDRADHLAVEITDEPVGEVRSRFYARAPELHRSPVFAVAVVRETVGDR 120 ASLTARTLYWEVPDRADHLAVEITDEPVGEVRSRFYARAPELHRSPVFAVAVVRETVGDR Sbjct 61 ASLTARTLYWEVPDRADHLAVEITDEPVGEVRSRFYARAPELHRSPVFAVAVVRETVGDR 120 Query 121 LLLNFHHAAFDGMGGLRLLLSLARAYAGEPDEVGGPPIEEARNLKGVAGSRDLFDVLIRA 180 LLLNFHHAAFDGMGGLRLLLSLARAYAGEPDEVGGPPIEEARNLKGVAGSRDLFDVLIRA Sbjct 121 LLLNFHHAAFDGMGGLRLLLSLARAYAGEPDEVGGPPIEEARNLKGVAGSRDLFDVLIRA 180 Query 181 RGLAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLTIESDEMATAVARRPEGATVNDLAMAA 240 RGLAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLTIESDEMATAVARRPEGATVNDLAMAA Sbjct 181 RGLAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLTIESDEMATAVARRPEGATVNDLAMAA 240 Query 241 LALTILQWNRTHDVPAADSVSVNMPVNFRPTAWSTEVISNFASYLAIVLRVDEVTDLEKA 300 LALTILQWNRTHDVPAADSVSVNMPVNFRPTAWSTEVISNFASYLAIVLRVDEVTDLEKA Sbjct 241 LALTILQWNRTHDVPAADSVSVNMPVNFRPTAWSTEVISNFASYLAIVLRVDEVTDLEKA 300 Query 301 TAIVAGITGPLKQSGAAGWVVDLLEGGKVLPAMLKRQLQLLLPLVEDRFVESVCLSNLGR 360 TAIVAGITGPLKQSGAAGWVVDLLEGGKVLPAMLKRQLQLLLPLVEDRFVE+VCLSNLGR Sbjct 301 TAIVAGITGPLKQSGAAGWVVDLLEGGKVLPAMLKRQLQLLLPLVEDRFVETVCLSNLGR 360 Query 361 VDVPAFGGEAGDTTEVWFSPTAAMSVMPIGVGLVGFGGTLRAMFRGDGRTIGGEALGRFA 420 VDVPAFGGEAGDTTEVWFSPTAAMSVMPIGVGLVGFGGTLRAMFRGDGRTIGGEALGRFA Sbjct 361 VDVPAFGGEAGDTTEVWFSPTAAMSVMPIGVGLVGFGGTLRAMFRGDGRTIGGEALGRFA 420 Query 421 ALYRDTLLT 429 ALYRDTLLT Sbjct 421 ALYRDTLLT 429 >gi|340627313|ref|YP_004745765.1| hypothetical protein MCAN_23311 [Mycobacterium canettii CIPT 140010059] gi|340005503|emb|CCC44663.1| hypothetical protein MCAN_23311 [Mycobacterium canettii CIPT 140010059] Length=429 Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/429 (99%), Positives = 428/429 (99%), Gaps = 0/429 (0%) Query 1 MTQTLRLTALDEMFITDDIDIVPSVQIEARVSGRFDLDRLAAALRAAVAKHALARARLGR 60 MTQTLRLTALDEMFITDDIDIVPSVQIEARVSGRFDLDRLAAALRAAVAKHALARARLGR Sbjct 1 MTQTLRLTALDEMFITDDIDIVPSVQIEARVSGRFDLDRLAAALRAAVAKHALARARLGR 60 Query 61 ASLTARTLYWEVPDRADHLAVEITDEPVGEVRSRFYARAPELHRSPVFAVAVVRETVGDR 120 ASLTARTLYWEVPDRADHLAVEITDEPV EVRSRFYARAPELHRSPVFAVAVVRETVGDR Sbjct 61 ASLTARTLYWEVPDRADHLAVEITDEPVSEVRSRFYARAPELHRSPVFAVAVVRETVGDR 120 Query 121 LLLNFHHAAFDGMGGLRLLLSLARAYAGEPDEVGGPPIEEARNLKGVAGSRDLFDVLIRA 180 LLLNFHHAAFDGMGGLRLLLSLARAYAGEPDEVGGPPIEEARNLKGVAGSRDLFDVLIRA Sbjct 121 LLLNFHHAAFDGMGGLRLLLSLARAYAGEPDEVGGPPIEEARNLKGVAGSRDLFDVLIRA 180 Query 181 RGLAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLTIESDEMATAVARRPEGATVNDLAMAA 240 RGLAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLTIESDEMATAVARRPEGATVNDLAMAA Sbjct 181 RGLAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLTIESDEMATAVARRPEGATVNDLAMAA 240 Query 241 LALTILQWNRTHDVPAADSVSVNMPVNFRPTAWSTEVISNFASYLAIVLRVDEVTDLEKA 300 LALTILQWNRTHDVPAADSVSVNMPVNFRPTAWSTEVISNFASYLAIVLRVDEVTDLEKA Sbjct 241 LALTILQWNRTHDVPAADSVSVNMPVNFRPTAWSTEVISNFASYLAIVLRVDEVTDLEKA 300 Query 301 TAIVAGITGPLKQSGAAGWVVDLLEGGKVLPAMLKRQLQLLLPLVEDRFVESVCLSNLGR 360 TAIVAGITGPLKQSGAAGWVVDLLEGGKVLPAMLKRQLQLLLPLVEDRFVESVCLSNLGR Sbjct 301 TAIVAGITGPLKQSGAAGWVVDLLEGGKVLPAMLKRQLQLLLPLVEDRFVESVCLSNLGR 360 Query 361 VDVPAFGGEAGDTTEVWFSPTAAMSVMPIGVGLVGFGGTLRAMFRGDGRTIGGEALGRFA 420 VDVPAFGGEAGDTTEVWFSPTAAMSVMPIGVGLVGFGGTLRAMFRGDGRTIGGEALGRFA Sbjct 361 VDVPAFGGEAGDTTEVWFSPTAAMSVMPIGVGLVGFGGTLRAMFRGDGRTIGGEALGRFA 420 Query 421 ALYRDTLLT 429 ALYRDTLLT Sbjct 421 ALYRDTLLT 429 >gi|31793483|ref|NP_855976.1| hypothetical protein Mb2327 [Mycobacterium bovis AF2122/97] gi|121638186|ref|YP_978410.1| hypothetical protein BCG_2321 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990680|ref|YP_002645367.1| hypothetical protein JTY_2315 [Mycobacterium bovis BCG str. Tokyo 172] 8 more sequence titles Length=429 Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/429 (99%), Positives = 428/429 (99%), Gaps = 0/429 (0%) Query 1 MTQTLRLTALDEMFITDDIDIVPSVQIEARVSGRFDLDRLAAALRAAVAKHALARARLGR 60 MTQTLRLTALDEMFITDDIDIVPSVQIEARVSGRFDLDRLAAALRAAVAKHALARARLGR Sbjct 1 MTQTLRLTALDEMFITDDIDIVPSVQIEARVSGRFDLDRLAAALRAAVAKHALARARLGR 60 Query 61 ASLTARTLYWEVPDRADHLAVEITDEPVGEVRSRFYARAPELHRSPVFAVAVVRETVGDR 120 ASLTARTLYWEVPDRADHLAVEITDEPVGEVRSRFYARAPELHRSPVFAVAVVRETVGDR Sbjct 61 ASLTARTLYWEVPDRADHLAVEITDEPVGEVRSRFYARAPELHRSPVFAVAVVRETVGDR 120 Query 121 LLLNFHHAAFDGMGGLRLLLSLARAYAGEPDEVGGPPIEEARNLKGVAGSRDLFDVLIRA 180 LLLNFHHAAFDGMGGLRLLLSLARAYA EPDEVGGPPIEEARNLKGVAGSRDLFDVLIRA Sbjct 121 LLLNFHHAAFDGMGGLRLLLSLARAYADEPDEVGGPPIEEARNLKGVAGSRDLFDVLIRA 180 Query 181 RGLAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLTIESDEMATAVARRPEGATVNDLAMAA 240 RGLAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLTIESDEMATAVARRPEGATVNDLAMAA Sbjct 181 RGLAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLTIESDEMATAVARRPEGATVNDLAMAA 240 Query 241 LALTILQWNRTHDVPAADSVSVNMPVNFRPTAWSTEVISNFASYLAIVLRVDEVTDLEKA 300 LALTILQWNRTHDVPAADSVSVNMPVNFRPTAWSTEVISNFASYLAIVLRVDEVTDLEKA Sbjct 241 LALTILQWNRTHDVPAADSVSVNMPVNFRPTAWSTEVISNFASYLAIVLRVDEVTDLEKA 300 Query 301 TAIVAGITGPLKQSGAAGWVVDLLEGGKVLPAMLKRQLQLLLPLVEDRFVESVCLSNLGR 360 TAIVAGITGPLKQSGAAGWVVDLLEGGKVLPAMLKRQLQLLLPLVEDRFVESVCLSNLGR Sbjct 301 TAIVAGITGPLKQSGAAGWVVDLLEGGKVLPAMLKRQLQLLLPLVEDRFVESVCLSNLGR 360 Query 361 VDVPAFGGEAGDTTEVWFSPTAAMSVMPIGVGLVGFGGTLRAMFRGDGRTIGGEALGRFA 420 VDVPAFGGEAGDTTEVWFSPTAAMSVMPIGVGLVGFGGTLRAMFRGDGRTIGGEALGRFA Sbjct 361 VDVPAFGGEAGDTTEVWFSPTAAMSVMPIGVGLVGFGGTLRAMFRGDGRTIGGEALGRFA 420 Query 421 ALYRDTLLT 429 ALYRDTLLT Sbjct 421 ALYRDTLLT 429 >gi|289762466|ref|ZP_06521844.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289709972|gb|EFD73988.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] Length=291 Score = 577 bits (1486), Expect = 2e-162, Method: Compositional matrix adjust. Identities = 290/291 (99%), Positives = 291/291 (100%), Gaps = 0/291 (0%) Query 139 LLSLARAYAGEPDEVGGPPIEEARNLKGVAGSRDLFDVLIRARGLAKPAIDRKRTTRVAP 198 +LSLARAYAGEPDEVGGPPIEEARNLKGVAGSRDLFDVLIRARGLAKPAIDRKRTTRVAP Sbjct 1 MLSLARAYAGEPDEVGGPPIEEARNLKGVAGSRDLFDVLIRARGLAKPAIDRKRTTRVAP 60 Query 199 DGGSPDGPRFVFAPLTIESDEMATAVARRPEGATVNDLAMAALALTILQWNRTHDVPAAD 258 DGGSPDGPRFVFAPLTIESDEMATAVARRPEGATVNDLAMAALALTILQWNRTHDVPAAD Sbjct 61 DGGSPDGPRFVFAPLTIESDEMATAVARRPEGATVNDLAMAALALTILQWNRTHDVPAAD 120 Query 259 SVSVNMPVNFRPTAWSTEVISNFASYLAIVLRVDEVTDLEKATAIVAGITGPLKQSGAAG 318 SVSVNMPVNFRPTAWSTEVISNFASYLAIVLRVDEVTDLEKATAIVAGITGPLKQSGAAG Sbjct 121 SVSVNMPVNFRPTAWSTEVISNFASYLAIVLRVDEVTDLEKATAIVAGITGPLKQSGAAG 180 Query 319 WVVDLLEGGKVLPAMLKRQLQLLLPLVEDRFVESVCLSNLGRVDVPAFGGEAGDTTEVWF 378 WVVDLLEGGKVLPAMLKRQLQLLLPLVEDRFVESVCLSNLGRVDVPAFGGEAGDTTEVWF Sbjct 181 WVVDLLEGGKVLPAMLKRQLQLLLPLVEDRFVESVCLSNLGRVDVPAFGGEAGDTTEVWF 240 Query 379 SPTAAMSVMPIGVGLVGFGGTLRAMFRGDGRTIGGEALGRFAALYRDTLLT 429 SPTAAMSVMPIGVGLVGFGGTLRAMFRGDGRTIGGEALGRFAALYRDTLLT Sbjct 241 SPTAAMSVMPIGVGLVGFGGTLRAMFRGDGRTIGGEALGRFAALYRDTLLT 291 >gi|294816168|ref|ZP_06774811.1| Condensation domain protein [Streptomyces clavuligerus ATCC 27064] gi|326444502|ref|ZP_08219236.1| hypothetical protein SclaA2_25711 [Streptomyces clavuligerus ATCC 27064] gi|294328767|gb|EFG10410.1| Condensation domain protein [Streptomyces clavuligerus ATCC 27064] Length=458 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 115/393 (30%), Positives = 150/393 (39%), Gaps = 66/393 (16%) Query 24 SVQIEARVSGRFDLDRLAAALRAAVAKHALARARLGRASLTARTLYWEVPDRADHLAVEI 83 ++ IE R+ GR D RL A A+ +H A R R WE D V++ Sbjct 39 TIHIEIRLPGRPDPARLRRAFTDALRRHPRALVRQAPGPWYRRRYLWEQTGEPDP-GVDV 97 Query 84 TDEP------VGEVRSRFYARAPELHRSPVFAVAVVRETV---GDRLLLNFHHAAFDGMG 134 P + R R A AP L +P + +V + G L L +H A DG Sbjct 98 VTVPAPGPGALERARERALASAPPLSAAPPVRLELVEDPERPGGSALFLTVNHTALDGPA 157 Query 135 GLRLLLSLARAYAGEPDEVGGPPIEEARNLKGVAGSRDLFDVLIRARGLAKPA-IDRKRT 193 GLR+L + A Y G + PP+ AG+ D RA P + R Sbjct 158 GLRVLATAAELYGGRGTDPAAPPVR--------AGTGD------RAAVPGPPGWVPSARV 203 Query 194 TRVAPDGGSPDGPRFVFAPLTIESDEMATAVARRPEGA--TVNDLAMAALALTILQWNRT 251 R P G +G + A L AV RRP GA TVND + A ALTI QWNR Sbjct 204 ARGTPSGRPGNG--LLVADL---------AVPRRPPGAAYTVNDQLLVATALTIAQWNRE 252 Query 252 HDVPAADSVSVNMPVNFRPTAWSTEVISNFASYLAIVLRVDEVTDLEKATA--------- 302 P + + MPV+ RP I N + + V E T E+ TA Sbjct 253 RGAP-PRPIRITMPVDDRPRGVDMP-IGNGTRLVDVPFTVAEQTPGERGTAGAGDPDALG 310 Query 303 ----IVAGIT-------GPLKQSGAAGWVVDLLEGGKVLPAMLKRQLQLLLPLVEDRFVE 351 AG T GP GAA L V P + + L + Sbjct 311 ELLRRTAGRTRALKAAPGPQLGRGAA------LLTAPVAPVAWRAAVTRGLRRAAGPWTS 364 Query 352 SVCLSNLGRVDVPAFGGEAGDTTEVWFSPTAAM 384 + LSN+GR+ G+AG VW S A M Sbjct 365 TALLSNIGRIPYALDFGDAGRADAVWISAPARM 397 >gi|29832277|ref|NP_826911.1| hypothetical protein SAV_5734 [Streptomyces avermitilis MA-4680] gi|29609396|dbj|BAC73446.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length=441 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 101/385 (27%), Positives = 141/385 (37%), Gaps = 59/385 (15%) Query 24 SVQIEARVSGRFDLDRLAAALRAAVAKHALARARLGRASLTARTLYWEVPDRADHLAVEI 83 +V IE + GR D RL A A+ +H R R WE+ D V++ Sbjct 42 TVHIEVHLPGRLDPARLRTAFTRALHRHPRILMREAEGPWYRRRYEWELTPDPD---VDV 98 Query 84 TDEP------VGEVRSRFYARAPELHRSPVFAVAVVRE---TVGDRLLLNFHHAAFDGMG 134 P + R R AP L SP + VV E + G L L +H A DG Sbjct 99 VSFPPPDRDALKHARDRALGAAPPLTASPPIRLEVVDEDDPSHGTVLFLTINHTALDGPA 158 Query 135 GLRLLLSLARAYAGEPDEVGGPPIEEARNLKGVAGSRDLFDVLIRARGLAKPAIDRKRTT 194 LR+L + A Y G + PP+ D + R Sbjct 159 CLRVLATAAELYGGRDNSPSAPPVRTP-------------DAPLEQVDTPSTWTPPARVA 205 Query 195 RVAPDGGSPDGPRFVFAPLTIESDEMATAVARRPEGA--TVNDLAMAALALTILQWNRTH 252 AP+ +G + E+ +V RP+GA TVND M A AL I WNR H Sbjct 206 HGAPEPSPGNG---------VLVTEL--SVPHRPKGAPYTVNDQLMVATALMIAHWNREH 254 Query 253 DVPAADSVSVNMPVNFRPTAWSTEVISNFASYLAIVLRVDEVTDLEKA------------ 300 + + MPV+ RP + I N + + E+T +++ Sbjct 255 GA-RPRPLRITMPVDDRPRG-TDMPIGNGTRLVEVPFAPAELTSVDRGSMPDLLRRTADR 312 Query 301 TAIVAGITGPLKQSGAAGWVVDLLEGGKVLPAMLKRQLQLLLPLVEDRFVESVCLSNLGR 360 T + + P GAA L V+P + L L + + LSN+GR Sbjct 313 TRALKSLPRPQLGHGAA------LLTAPVVPVPWRAALTRGLRRAAAPWTSTTLLSNIGR 366 Query 361 VDVPA-FGGEAGDTTEVWFSPTAAM 384 + FG AG VWFS A M Sbjct 367 IPYALDFGDTAGRARAVWFSAPARM 391 >gi|291439825|ref|ZP_06579215.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291342720|gb|EFE69676.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length=434 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 114/398 (29%), Positives = 152/398 (39%), Gaps = 76/398 (19%) Query 24 SVQIEARVSGRFDLDRLAAALRAAVAKHALARARLGRASLTARTLYWEVPDRADHLAVEI 83 +V IE + G D RL A A+ +H R R WE+ D D AV Sbjct 27 TVHIEVHLPGHLDHGRLRKAFTEALRRHPRILMREAPGPWYRRRYEWELTDEPDVEAVRF 86 Query 84 TDEPVGE-----VRSRFYARAPELHRSPVFAVAVVRETVGDR---------------LLL 123 P G R R ++AP L SP + VV + V D L+L Sbjct 87 --PPPGRDSLEGARGRSLSQAPPLTASPPVRLEVVDDAVTDTAVTDTAVADGGRGTALVL 144 Query 124 NFHHAAFDGMGGLRLLLSLARAYAGEPDEVGGPPIEEARNLKGVAGSRDLFDVLIRARGL 183 +H A DG LR+L + A Y G + PP+ A +G DV Sbjct 145 TVNHTALDGPACLRVLATAAEVYGGRDNAPAAPPVRPAEPPQGPP------DV---PSPW 195 Query 184 AKPAIDRKRTTRVAPDGGSP-----DGPRFVFAPLTIESDEMATAVARRPEGA--TVNDL 236 A PA RVAP G+P +G PL RP+G+ TVND Sbjct 196 APPA-------RVAP--GTPGRIPGNGQLLTELPL-----------PHRPKGSPYTVNDQ 235 Query 237 AMAALALTILQWNRTHDVPAADSVSVNMPVNFRPTAWSTEVISNFASYLAIVLRVDE--- 293 M A ALT+ WNR A + + MPV+ RP + I N + + DE Sbjct 236 LMVATALTVAHWNRERGA-ARRPLRITMPVDDRPRD-AAMPIGNGTRLVDVSFAPDELDS 293 Query 294 --VTDLEKATAI----VAGITGPLKQSGAAGWVVDLLEGGKVLPAMLKRQLQLLLPLVED 347 + +L + TA+ + + P GAA L P + L L Sbjct 294 VPMPELLRRTALRTRALKSLPRPQLGHGAA------LLTAPWAPVACRAALTRALRRAAA 347 Query 348 RFVESVCLSNLGRVDVPA-FGGEAGDTTEVWFSPTAAM 384 + + LSN+GR+ P FG EAG VWFS A M Sbjct 348 PWTSTTLLSNIGRIPYPLDFGEEAGRAHAVWFSAPARM 385 >gi|158312449|ref|YP_001504957.1| condensation domain-containing protein [Frankia sp. EAN1pec] gi|158107854|gb|ABW10051.1| condensation domain protein [Frankia sp. EAN1pec] Length=450 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 110/435 (26%), Positives = 169/435 (39%), Gaps = 44/435 (10%) Query 7 LTALDEMFITDDIDIVP-SVQIEARVSGRFDLDRLAAALRAAVAKHALARARLGRASLTA 65 LT+ +++ D P + + G D RL A+R A +H + RA L A Sbjct 30 LTSSEQILAASDRPDAPLTCGFLVQFEGELDAARLRCAVREASRRHPMMRAAL----YGA 85 Query 66 RTLYWEVPDRADHLAVEITDEPVG--EVRSRFYARAPELHRSPVFAVAVVRETVGDRLLL 123 R W +V + ++ +V + +LH P +A+VR GD+L L Sbjct 86 RQYAWRFGTEPPAGSVGLVEDGSSGWDVHEMMVSGRFDLHAHPPLRIALVRGPDGDQLSL 145 Query 124 NFHHAAFDGMGGLRLLLSLARAY-AGEPDEVGGPPIEEARNLKGVAGSRDLFDVLIRARG 182 HH A DGMG +L + Y E V P++ L AG + Sbjct 146 VAHHLAVDGMGLTTILSDIIAEYRLAEVATVTAGPVDTHVGLP--AGVPPAAKAAV---- 199 Query 183 LAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLTIE-SDEMATAVARRPEGATVNDLAMAAL 241 A R+ + P G D + + PLT+ + RR TVNDL MAA Sbjct 200 AGWTAFTRRSGRHITPMGTGRD-TGYGYQPLTLPVPGRVLLGSGRR---ITVNDLLMAAT 255 Query 242 ALTILQWNRTHDVPAADSVSVNMPVNFRPTAWSTEVISNFASYLAIVLRVDEVTDLEKAT 301 LTI +WNR + + + MP++ A EV N +V + DL + Sbjct 256 HLTIDRWNRQRG-GESGKLRIRMPISLGNAA---EVGGNNTGQALVVTEPTDRADLARLA 311 Query 302 AIVAGITGPLKQ----------SGAAGWVVDLLEGGKVLPAMLKRQLQLLLPLVEDRFVE 351 A V T KQ +G G V L G +L+ ++ PL+ Sbjct 312 ARVVDQTERAKQAATAPPIAGVAGKVGMVATELTPGPWRVPLLRWGVRAARPLI----TP 367 Query 352 SVCLSNLGRVDVPAFGGEAGDTTEVWFSPTAAMSVMPIG--VGLVGFGGTLRAMFRGDGR 409 + +SN+G + + + + V+F+ T MP G + + G+G + F Sbjct 368 AAAVSNIGSLS--SLASDEPKISSVYFTATVG---MPQGLLICVAGYGNNIHVTFGYHRH 422 Query 410 TIGGEALGRFAALYR 424 G EA FA L+R Sbjct 423 LFGREAASAFANLFR 437 >gi|111221309|ref|YP_712103.1| hypothetical protein FRAAL1869 [Frankia alni ACN14a] gi|111148841|emb|CAJ60519.1| hypothetical protein; putative Condensation domain [Frankia alni ACN14a] Length=475 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 126/446 (29%), Positives = 180/446 (41%), Gaps = 99/446 (22%) Query 32 SGRFDLDRLAAALRAAVAKHALARARLGRASLTARTLYWEVPDRADHLAVEITDEPVGEV 91 +GR D RL AA+ + +H +ARA L +R W P E T +PVG V Sbjct 27 TGRLDPARLRAAVWTVIRRHPMARAVL----YGSRQHAWRFP-------AEPTADPVGFV 75 Query 92 R--------SRFYARAP-ELHRSPVFAVAVVRETVGDRLLLNFHHAAFDGMGGLRL---- 138 + AP +LHR P VA++R GD+L + HH AFD GLRL Sbjct 76 DDGTDGWRIHEILSSAPFDLHRYPPIRVALIRRADGDQLSVVAHHLAFD---GLRLAALV 132 Query 139 --LLSLARAYAGEPDEVGGPPIEEARNLKGVAGSRDLFDVLIRARGLAKPAIDRKRTTRV 196 +L R A + D G + +GV L RA A+ R+ + Sbjct 133 AEILDHYREAAYDADRDGA--VASGEGHRGVPAG---VAPLARAGVPGWAALVRRSGRYI 187 Query 197 APDGGSPDGPRFVFAPLTIES-DEMATAVARRPEG--ATVNDLAMAALALTILQWNRTHD 253 P DG + F PL + + DE T P+G T+NDL + A L I +WN + Sbjct 188 TPLAVGGDG--YGFHPLILAAPDERRTL----PDGRRMTINDLLIGAAHLAIDRWN-SRR 240 Query 254 VPAADSVSVNMPVNFRP--------------------------TAWSTEVISNFASYLAI 287 + + + MP++ T S+EV S L + Sbjct 241 GGESSRLRIRMPIDLGSASSFAAVPSSSSFPAASEISGNRTGQTIISSEVADRVDS-LQL 299 Query 288 VLRVDEVTDLEKATA--IVAGITGPLKQSGA----AGWVVDLLEGGKVLPAMLKRQLQLL 341 +RV + TDL K V G++G L + A W LL G + +L Sbjct 300 AVRVVDQTDLAKQVVPPAVPGLSGALGIAAARFVPGPWRSTLLRCG------VAAGRPVL 353 Query 342 LPLVEDRFVESVCLSNLGRVDVPAFGGEAG-DTTEVWFSPTAAMSVMPIG--VGLVGFGG 398 P + +SNLGR D G AG + V+F+ TA MP G +G++G G Sbjct 354 AP--------TAAVSNLGRFD--ELAGAAGRPISAVYFTGTAG---MPQGLFIGVLGMGD 400 Query 399 TLRAMFRGDGRTIGGEALGRFAALYR 424 +L F +G ++ FA LYR Sbjct 401 SLHVTFGYHRHLLGPGSVPTFADLYR 426 >gi|297199450|ref|ZP_06916847.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gi|197713010|gb|EDY57044.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] Length=454 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 108/410 (27%), Positives = 146/410 (36%), Gaps = 80/410 (19%) Query 24 SVQIEARVSGRFDLDRLAAALRAAVAKHALARARLGRASLTARTLYWEVPDRADHLAVEI 83 +V IE + GR D RL A A+ +H R R WE+ D VE+ Sbjct 27 TVHIEVHLPGRLDRSRLRKAFLEALHRHPRILMREAPGGRYRRRYEWELTTEPD---VEV 83 Query 84 TDEP------VGEVRSRFYARAPELHRSPVFAVAVV-----------------------R 114 P + + R+R AP L SP + VV R Sbjct 84 VSFPEAGRNALRDARTRALEEAPPLSLSPPIRLEVVEGAGPAEGSEATDMVGLHPPAWGR 143 Query 115 ETVGDR-----------LLLNFHHAAFDGMGGLRLLLSLARAYAGEPDEVGGPPIEEARN 163 + D+ L L +H A DG LR+L + A Y G + P Sbjct 144 GELRDKPPLPRTRQTTVLFLTINHTALDGPACLRILATAAEIYGGRDNS----PTPAPIR 199 Query 164 LKGVAGSRDLFDVLIRARGLAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLTIESDEMATA 223 + D R PA R + P+ +G PL Sbjct 200 PPDPPQTTDAPSNWTR------PA----RVAQGTPENSPGNGLLVTELPL---------- 239 Query 224 VARRPEGA--TVNDLAMAALALTILQWNRTHDVPAADSVSVNMPVNFRPTAWSTEVISNF 281 RP+G+ TVND M A ALTI WNR H + + MPV+ RP +T I N Sbjct 240 -PHRPKGSPYTVNDQLMVATALTIAHWNREHGQ-TPRPLRITMPVDDRPRD-TTMPIGNG 296 Query 282 ASYLAIVLRVDEV----TDLEKATAIVAGITGPLK--QSGAAGWVVDLLEGGKVLPAMLK 335 + + +E+ TD+ + + A T LK G LL V P + Sbjct 297 TRLVEVPFSAEELPHDPTDMPEFLSRTAQRTRALKSLSRPQLGHGASLLT-APVTPVAWR 355 Query 336 RQLQLLLPLVEDRFVESVCLSNLGRVDVPA-FGGEAGDTTEVWFSPTAAM 384 L L + + LSN+GR+ P FG EAG VWFS A M Sbjct 356 AALTRGLRRAAAPWTSTTLLSNIGRIPYPLDFGEEAGRAHAVWFSAPARM 405 >gi|302551175|ref|ZP_07303517.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM 40736] gi|302468793|gb|EFL31886.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM 40736] Length=480 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 76/278 (28%), Positives = 109/278 (40%), Gaps = 41/278 (14%) Query 118 GDRLLLNFHHAAFDGMGGLRLLLSLARAYAGEPDEVGGPPIEEARNLKGVAGSRDLFDVL 177 G L+L +H A DG LR+L + A Y G + PP R + ++D+ Sbjct 184 GTVLVLTINHTALDGPACLRVLATAAELYGGTDNSPTAPPT---RTPQAPQEAKDI---- 236 Query 178 IRARGLAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLTIESDEMATAVARRPEGA--TVND 235 + PA + T +P G L E + RP+G+ TVND Sbjct 237 --PTSWSPPARVAQGTPEPSPGNGL----------LVTE-----LPLPHRPKGSPYTVND 279 Query 236 LAMAALALTILQWNRTHDVPAADSVSVNMPVNFRPTAWSTEVISNF----ASYLAIVLRV 291 M ALT+ WNR H + + + MPV+ RP S + + +L L V Sbjct 280 QLMVTTALTVAHWNREHGIRPRRPLRITMPVDDRPRDASMPIGNGTRLVEVPFLPTELDV 339 Query 292 DEVTDLEKATA----IVAGITGPLKQSGAAGWVVDLLEGGKVLPAMLKRQLQLLLPLVED 347 ++ L + TA + + P GAA L P + L L Sbjct 340 TDMPALIRRTAERTRALKSLPRPQLGHGAA------LLTAPWAPVAARAALTRTLRRAAA 393 Query 348 RFVESVCLSNLGRVDVPA-FGGEAGDTTEVWFSPTAAM 384 + + LSN+GR+ P FG EAG VWFS A M Sbjct 394 PWTSTTLLSNIGRIPYPLDFGAEAGRAHAVWFSAPARM 431 Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust. Identities = 32/102 (32%), Positives = 41/102 (41%), Gaps = 7/102 (6%) Query 24 SVQIEARVSGRFDLDRLAAALRAAVAKHALARARLGRASLTARTLYWEVPDRADHLAVEI 83 +V IE + G D RL A A+ +H R R R WE+ D A+ Sbjct 27 TVHIEVHLPGTLDEPRLRKAFTEALHRHPRILMREARGPWYRRRYEWELTGEPDTEAITF 86 Query 84 TDEPVG-----EVRSRFYARAPELHRSPVFAVAVVRETVGDR 120 T P G + R+R A AP L SP + VV G R Sbjct 87 T--PAGPRALQDARTRALAEAPPLSMSPPIRLEVVAPAAGSR 126 >gi|116871852|ref|YP_848633.1| hypothetical protein lwe0432 [Listeria welshimeri serovar 6b str. SLCC5334] gi|116740730|emb|CAK19850.1| conserved hypothetical protein [Listeria welshimeri serovar 6b str. SLCC5334] Length=423 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 78/299 (27%), Positives = 121/299 (41%), Gaps = 32/299 (10%) Query 44 LRAAVAKHALARAR------LGRASLTARTLYW-EVPDRADHLAVEI-TDEPVGEVRSRF 95 L AV K A+ ++ L + T YW E AD L + T EP EV +R Sbjct 39 LNMAVLKKAVMQSTEKLPLLLCHFNETKNGAYWQESVFSADDLVFLVETTEPDAEV-NRA 97 Query 96 YARAPELHRSPVFAVAVVRETVGDRLLLNFHHAAFDGMGGLRLLLSLARAYAGEPDEVGG 155 R P +VR T DRL++ +H DG G L L+ Y+ + + Sbjct 98 LIRKLSTENGPQICFTIVRTTTTDRLVVIMNHMLADGAGFKEYLYLLSETYS---NLLEN 154 Query 156 PPIEEARNLKGVAGSRDLFDVLIRARGLAKPAIDRKRTTR------VAPDGGSPDGPRFV 209 P +L GSR L + + K I K+ V P G P+ P+ + Sbjct 155 PAYHANLSL----GSRSLSQIFKQFSHKEKKTILTKKAKNKTVHNPVFPLQGDPENPKVI 210 Query 210 FAPLTIESDEMATAVARRPEGATVNDLAMAALALTILQWNRTHDVPAADSVSVNMPVNFR 269 + L+ + A+ E ATVND+ AA+A T+ H + +S++ P++ R Sbjct 211 WTKLSKANFTQIIQYAKTQE-ATVNDVFFAAMAQTV------HQTTSESELSIDCPIDLR 263 Query 270 ---PTAWSTEVISNFASYLAIVLRVDEVTDLEKATAIVAGITGPLKQSGAAGWVVDLLE 325 P S + + A+ + + D+++ LE V P K S A + LLE Sbjct 264 KYLPERKSLGITNLTANITCEINKNDDLSSLESTLQAVKKSLDPQKNSLAPLRIYYLLE 322 >gi|315301512|ref|ZP_07872647.1| putative siderophore/Surfactin synthetase related protein [Listeria ivanovii FSL F6-596] gi|313630117|gb|EFR98115.1| putative siderophore/Surfactin synthetase related protein [Listeria ivanovii FSL F6-596] Length=428 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 61/229 (27%), Positives = 97/229 (43%), Gaps = 23/229 (10%) Query 106 PVFAVAVVRETVGDRLLLNFHHAAFDGMGGLRLLLSLARAYAGEPDEVGGPPIEEARNLK 165 P + +VR D+L++ +H DG G L L+ Y+ D G +K Sbjct 108 PQIRLTIVRTKASDQLVIVMNHMLADGAGFKEYLYLLSDLYSKSLDNPG-------YQVK 160 Query 166 GVAGSRDLFDVLIRARGLAKPAIDRKRTTR------VAPDGGSPDGPRFVFAPLTIESDE 219 + GSR L V + K AI K+ + + P G + P+ ++ ++ + Sbjct 161 LIPGSRSLKLVFDQFSSKQKQAILTKKKDQLPIQNPILPLQGDLNNPKIIWTKISKQKFA 220 Query 220 MATAVARRPEGATVNDLAMAALALTILQWNRTHDVPAADSVSVNMPVNFRPTAWSTEV-- 277 A++ E ATVND AA+ALTI H V ++S++ PV+ R V Sbjct 221 SFINYAKKHE-ATVNDALFAAMALTI------HQVTYQTAMSIDCPVDLRKYLLKDTVPG 273 Query 278 ISNFASYLAI-VLRVDEVTDLEKATAIVAGITGPLKQSGAAGWVVDLLE 325 I+N + + + + D +T E IV P K S A + LLE Sbjct 274 ITNLTANITCHITKNDNLTSFESTLQIVKKSLQPQKNSLDALRIYYLLE 322 >gi|326780920|ref|ZP_08240185.1| condensation domain protein [Streptomyces cf. griseus XylebKG-1] gi|326661253|gb|EGE46099.1| condensation domain protein [Streptomyces griseus XylebKG-1] Length=442 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 69/217 (32%), Positives = 93/217 (43%), Gaps = 28/217 (12%) Query 224 VARRPEGA--TVNDLAMAALALTILQWNRTHDVPAAD--SVSVNMPVNFRPTAWSTEVIS 279 V +R GA TVND M A ALT+ WNRT D P AD + + MPV+ R T I Sbjct 225 VPKRVSGAPYTVNDQLMVATALTVADWNRTQDAPWADRRPLRITMPVDDR-TRGPEMPIG 283 Query 280 NFASYLAIVLRVDE------VTDLEKAT-----AIVAGITGPLKQSGAAGWVVDLLEGGK 328 N + + E V L +AT A+ A PL +S + L Sbjct 284 NGTRLVEVGFAASEPAPGADVQALLRATAERTRALKARTRPPLGRSAS-------LLTAP 336 Query 329 VLPAMLKRQLQLLLPLVEDRFVESVCLSNLGRVDVPAFGGEAGDTTEVWFSPTAAMSVMP 388 ++P + L L ++ + + LSN+GRV P GEAG T VWFS A + MP Sbjct 337 LMPVAARAALTRGLRVLAAPWTSTTLLSNIGRVPYPLDFGEAGRATAVWFS---APARMP 393 Query 389 IGVGLV--GFGGTLRAMFRGDGRTIGGEALGRFAALY 423 G+ GG L R +G E R ++ Sbjct 394 RGLTFTTASTGGRLHLALRWSRTLLGDEDGVRLCEMF 430 >gi|182440258|ref|YP_001827977.1| hypothetical protein SGR_6465 [Streptomyces griseus subsp. griseus NBRC 13350] gi|178468774|dbj|BAG23294.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] Length=442 Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 69/217 (32%), Positives = 93/217 (43%), Gaps = 28/217 (12%) Query 224 VARRPEGA--TVNDLAMAALALTILQWNRTHDVPAAD--SVSVNMPVNFRPTAWSTEVIS 279 V +R GA TVND M A ALT+ WNRT D P AD + + MPV+ R T I Sbjct 225 VPKRVSGAPYTVNDQLMVATALTVADWNRTQDAPWADRRPLRITMPVDDR-TRGPEMPIG 283 Query 280 NFASYLAIVLRVDE------VTDLEKAT-----AIVAGITGPLKQSGAAGWVVDLLEGGK 328 N + + E V L +AT A+ A PL +S + L Sbjct 284 NGTRLVEVGFAASEPAPGADVPALLRATAERTRALKARTRPPLGRSAS-------LLTAP 336 Query 329 VLPAMLKRQLQLLLPLVEDRFVESVCLSNLGRVDVPAFGGEAGDTTEVWFSPTAAMSVMP 388 ++P + L L ++ + + LSN+GRV P GEAG T VWFS A + MP Sbjct 337 LMPVAARAALTRGLRVLAAPWTSTTLLSNIGRVPYPLDFGEAGRATAVWFS---APARMP 393 Query 389 IGVGLV--GFGGTLRAMFRGDGRTIGGEALGRFAALY 423 G+ GG L R +G E R ++ Sbjct 394 RGLTFTTASTGGRLHLALRWSRTLLGDEDGVRLCEMF 430 >gi|239985945|ref|ZP_04706609.1| hypothetical protein SrosN1_01427 [Streptomyces roseosporus NRRL 11379] Length=273 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/208 (33%), Positives = 88/208 (43%), Gaps = 29/208 (13%) Query 224 VARRPEGA--TVNDLAMAALALTILQWNRTHDVPAAD--SVSVNMPVNFRPTAWSTEVIS 279 V RR GA TVND M A ALT+ WNR P AD + + MPV+ RP I Sbjct 56 VPRRESGAPYTVNDQLMVATALTVADWNRAQGAPGADRRPLRITMPVDDRPRG-PEMPIG 114 Query 280 NFASYLAIVLRVDEV-----------TDLEKATAIVAGITGPLKQSGAAGWVVDLLEGGK 328 N + + EV T E+ A+ A P Q G ++ + Sbjct 115 NGTRLVEVGFTAAEVAAGADVAALLRTTAERTRALKAQ---PRPQLGHGAGLLTV----P 167 Query 329 VLPAMLKRQLQLLLPLVEDRFVESVCLSNLGRVDVPAFGGEAGDTTEVWFSPTAAMSVMP 388 +LP + L L + + + LSN+GR+ P GEAG T VWFS A + MP Sbjct 168 LLPVAARAALTRGLRVAAGPWTSTTLLSNIGRIPYPLDFGEAGRATAVWFS---APARMP 224 Query 389 IGVGLV--GFGGTLRAMFRGDGRTIGGE 414 G+ GG L R RT+ GE Sbjct 225 RGLTFTTASTGGRLHLALRWS-RTLLGE 251 >gi|325109285|ref|YP_004270353.1| condensation domain protein [Planctomyces brasiliensis DSM 5305] gi|324969553|gb|ADY60331.1| condensation domain protein [Planctomyces brasiliensis DSM 5305] Length=486 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 83/306 (28%), Positives = 121/306 (40%), Gaps = 39/306 (12%) Query 5 LRLTALDEMFITDDIDIVPSV-QIEARVSGRFDLDRLAAALRAAVAKHALARARLGRASL 63 L LTA ++ TDD P V IE + G + L +AL+ A+ +H L RA++ + Sbjct 35 LPLTAYEQYMWTDDRPSHPMVFCIEVLLEGTLERPALESALKRALVRHPLLRAQIQKR-- 92 Query 64 TARTLYWEVPDRADHLAVEITDEPVGEVRSRFYARAPELHRSPVFAVAVVRETVGDRLLL 123 AR W D+ L E R F L P + V + R + Sbjct 93 FARQPAWVAADKTPELQWFTPIEYKNASRPPFL----NLRNEPGLRMWAVDDKREPRFVF 148 Query 124 NFHHAAFDGMGGLRLLLSLARAYA----GEPDEVGGPPIE----EARNLKGVAGSRDLFD 175 FHHAA DG+G + + L YA E DEV P +E E +L+G G Sbjct 149 QFHHAAVDGVGAIEFIGDLLALYAQQTSAEGDEV--PELEPIDFEKLHLRGKLG------ 200 Query 176 VLIRARGLAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLT---------IESDEMATAV-- 224 L R+RG P R ++ + G + P T I + + AV Sbjct 201 FLSRSRGDWIPGFARYTWENISQFPAALVGSKQNDEPSTRGIPPYVTRILDNTVLQAVKN 260 Query 225 --ARRPEGATVNDLAMAALALTILQWNRTHDVPAADS-VSVNMPVNFRPTAWSTEVISNF 281 ARR G T N++ A + T +WN T + + MP++ R +N Sbjct 261 EAARR--GVTPNEIYTAIMLQTFARWNETQRAGRKPGLLRLCMPISLRSPELDDCPSANI 318 Query 282 ASYLAI 287 SY+ I Sbjct 319 ISYMLI 324 >gi|315281004|ref|ZP_07869744.1| conserved hypothetical protein [Listeria marthii FSL S4-120] gi|313615342|gb|EFR88747.1| conserved hypothetical protein [Listeria marthii FSL S4-120] Length=422 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 74/304 (25%), Positives = 123/304 (41%), Gaps = 29/304 (9%) Query 33 GRFDLDRLAAALRAAVAKHALARARLGRASLTARTLYWE--VPDRADHLAVEITDEPVGE 90 ++D L A+ + K L T + +W+ V D + + T P E Sbjct 37 NHLNIDVLKKAVMQSTQKLPLLLCHFKE---TKKGAFWQESVFSAEDLVFLVETQTPETE 93 Query 91 VRSRFYARAPELHRSPVFAVAVVRETVGDRLLLNFHHAAFDGMGGLRLLLSLARAYAGEP 150 V +R R P + +VR D+L++ +H DG G L L+ Y+ Sbjct 94 V-NRALVRKLSTENGPQICLTIVRTETADQLVIIMNHMLADGAGFKEYLYLLSEIYS--- 149 Query 151 DEVGGPPIEEARNLKGVAGSRDLFDVLIRARGLAKPAIDRKRTTRVA------PDGGSPD 204 E+ G P +A NL GSR L V + +I ++TT+ A P G P Sbjct 150 -ELLGNPDYQA-NLS--LGSRSLNQVFEQFSRKEIKSIFTEKTTQKAVHNPSFPLKGDPK 205 Query 205 GPRFVFAPLTIESDEMATAVARRPEGATVNDLAMAALALTILQWNRTHDVPAADSVSVNM 264 P ++ ++ + A+ E ATVND+ AA+ T+ Q + ++ +S++ Sbjct 206 NPEIIWTKVSKTNFSQIIHYAKEHE-ATVNDVLFAAMVRTVQQTTQQNE------MSIDC 258 Query 265 PVNFR---PTAWSTEVISNFASYLAIVLRVDEVTDLEKATAIVAGITGPLKQSGAAGWVV 321 PV+ R P S + + A+ + D+++ E V P K S A + Sbjct 259 PVDLRKYLPNKTSRGITNLTANITCQIKATDDLSSFESTLQAVKKSLNPQKNSLAPLRIY 318 Query 322 DLLE 325 LLE Sbjct 319 YLLE 322 >gi|289433741|ref|YP_003463613.1| hypothetical protein lse_0374 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289169985|emb|CBH26525.1| conserved hypothetical protein [Listeria seeligeri serovar 1/2b str. SLCC3954] Length=422 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 57/229 (25%), Positives = 96/229 (42%), Gaps = 23/229 (10%) Query 106 PVFAVAVVRETVGDRLLLNFHHAAFDGMGGLRLLLSLARAYAGEPDEVGGPPIEEARNLK 165 P + V+R D+L++ +H DG G + L L+ Y+ ++ P + + Sbjct 108 PQIRLTVIRTKTSDQLVIILNHMLADGAGFKQYLYLLSDLYS----KLLENPEYQVKLSP 163 Query 166 GVAGSRDLFDVLIRARG---LAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLTIESDEMAT 222 G G + +FD R + L K + P G + P+ ++ + + Sbjct 164 GSRGLKQVFDQFSRKQKQEILTKQKNQLPVQNPITPLQGDANNPKIIWTKTSKQQFASLI 223 Query 223 AVARRPEGATVNDLAMAALALTILQWNRTHDVPAADSVSVNMPVNFRP------TAWSTE 276 + A++ ATVND+ A+ALTI H V ++S++ PV+ R T T Sbjct 224 SYAKK-HDATVNDVFFTAMALTI------HQVTDQTAMSIDCPVDLRKYLPKNRTPGITN 276 Query 277 VISNFASYLAIVLRVDEVTDLEKATAIVAGITGPLKQSGAAGWVVDLLE 325 + +N +A D +T E+ IV P K S AA + LLE Sbjct 277 LTANITCQIA---ATDSLTSFEETLHIVKKSLQPQKNSLAALRIYYLLE 322 >gi|46906693|ref|YP_013082.1| hypothetical protein LMOf2365_0476 [Listeria monocytogenes serotype 4b str. F2365] gi|46879958|gb|AAT03259.1| conserved hypothetical protein [Listeria monocytogenes serotype 4b str. F2365] Length=422 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 57/232 (25%), Positives = 92/232 (40%), Gaps = 29/232 (12%) Query 106 PVFAVAVVRETVGDRLLLNFHHAAFDGMGGLRLLLSLARAYAG---EPDEVGGPPIEEAR 162 P VVR D+L++ +H DG G L L+ Y+ PD + +R Sbjct 108 PQICFTVVRADTSDQLVVIMNHMLADGAGFKEYLYLLSELYSNLLENPDYAANLSL-GSR 166 Query 163 NLKGVAGS------RDLFDVLIRARGLAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLTIE 216 +LK + + +F + + + P P G P P+F++ L E Sbjct 167 SLKQIFDQFSRKDIKSIFTEKTKQKAVHNPTF---------PLKGDPKNPKFIWTKLPKE 217 Query 217 SDEMATAVARRPEGATVNDLAMAALALTILQWNRTHDVPAADSVSVNMPVNFR---PTAW 273 A+ E ATVND+ AA+A T+ Q +S++ PV+ R P+ Sbjct 218 DFSEIIHFAKEHE-ATVNDVLFAAMARTVQQ------TTGQQEMSIDCPVDLRKYLPSKT 270 Query 274 STEVISNFASYLAIVLRVDEVTDLEKATAIVAGITGPLKQSGAAGWVVDLLE 325 S+ + + A+ + D++T E V P K S A + LLE Sbjct 271 SSGITNLTANITCQISANDDLTSFESTLQAVKNSLNPQKNSFAPLRIYYLLE 322 >gi|290960732|ref|YP_003491914.1| hypothetical protein SCAB_63651 [Streptomyces scabiei 87.22] gi|260650258|emb|CBG73374.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length=478 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 105/419 (26%), Positives = 142/419 (34%), Gaps = 87/419 (20%) Query 24 SVQIEARVSGRFDLDRLAAALRAAVAKHALARARLGRASLTARTLYWEVPDRADHLAVEI 83 +V IE + GR D RL A A+ H R +R WE+ + + VE+ Sbjct 39 TVHIEVHLPGRLDPGRLRTAFVTALRAHPRILMREAPGRWWSRRYEWELTEGPE---VEV 95 Query 84 TDEP------VGEVRSRFYARAPELHRSPVFAVAVVR----------------------- 114 P + + R+R AP L SP + VVR Sbjct 96 VAFPPAGPHALRDARTRSLVEAPPLTLSPPIRLEVVRGAGPAVGSEATDAVGLAAGRPAA 155 Query 115 -----------------ETVGDRLLLNFHHAAFDGMGGLRLLLSLARAYAGEPDEVGGPP 157 E G L L +H A DG LR+L + A+ Y GE Sbjct 156 GAAEDAPAGPDRTAAPGEPKGTVLFLTVNHTALDGPACLRILATAAQLYGGE-------- 207 Query 158 IEEARNLKGVAGSRDLFDVLIRARGLAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLTIES 217 N R A A R RVA G+P+ P L E Sbjct 208 ----DNAPTAPPVRPAPAPDEPAAPGADTPSPWARPARVA--AGTPE-PSPGNGLLVTE- 259 Query 218 DEMATAVARRPEGA--TVNDLAMAALALTILQWNRTHDVPAADSVSVNMPVNFRPTAWST 275 V RRP+GA TVND M AL + WNR H + + MPV+ RP + Sbjct 260 ----LPVPRRPKGAPYTVNDQLMVTTALMLAHWNREHGA-HPRPLRITMPVDDRPRD-TD 313 Query 276 EVISNFASYLAIVLRVDEVTDLEKATAIVAGITG---------PLKQSGAAGWVVDLLEG 326 I N + + E+ ++ T P Q G ++ Sbjct 314 MAIGNGTRLVEVPFSPGELHPEHTPLPLLLRRTAERTRALKSLPRPQLGHGASLLT---- 369 Query 327 GKVLPAMLKRQLQLLLPLVEDRFVESVCLSNLGRVDVPA-FGGEAGDTTEVWFSPTAAM 384 V+P + L L + + LSN+GR+ FG EAG VWFS A M Sbjct 370 APVVPVAWRAALTRGLRRAAGPWTSTTLLSNIGRIPYSLDFGEEAGRAHAVWFSAPARM 428 >gi|284800725|ref|YP_003412590.1| hypothetical protein LM5578_0472 [Listeria monocytogenes 08-5578] gi|284993911|ref|YP_003415679.1| hypothetical protein LM5923_0471 [Listeria monocytogenes 08-5923] gi|284056287|gb|ADB67228.1| hypothetical protein LM5578_0472 [Listeria monocytogenes 08-5578] gi|284059378|gb|ADB70317.1| hypothetical protein LM5923_0471 [Listeria monocytogenes 08-5923] Length=422 Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 56/232 (25%), Positives = 93/232 (41%), Gaps = 29/232 (12%) Query 106 PVFAVAVVRETVGDRLLLNFHHAAFDGMGGLRLLLSLARAYAG---EPDEVGGPPIEEAR 162 P VVR D+L++ +H DG G L L+ Y+ PD + +R Sbjct 108 PQICFTVVRTESTDQLVIIMNHMLADGAGFKEYLYLLSELYSNLLENPDYAAKLSLG-SR 166 Query 163 NLKGVAGS------RDLFDVLIRARGLAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLTIE 216 +LK V + +F + + + P + P G P P+ ++ L E Sbjct 167 SLKQVFDQLSRKEIKSIFTEKTKQKAVHNPTL---------PLKGDPKNPKIIWTKLPKE 217 Query 217 SDEMATAVARRPEGATVNDLAMAALALTILQWNRTHDVPAADSVSVNMPVNFR---PTAW 273 + A+ ATVND+ A + T+LQ H+ +S++ PV+ R P+ Sbjct 218 NFSQILHYAKE-HDATVNDVLFATMVRTVLQTTGQHE------ISIDCPVDLRKYLPSKT 270 Query 274 STEVISNFASYLAIVLRVDEVTDLEKATAIVAGITGPLKQSGAAGWVVDLLE 325 S+ + + A+ + D++T E V P K S A + LLE Sbjct 271 SSGITNLTANITCQISTDDDLTSFESTLQAVKKSLDPQKNSLAPLRIYYLLE 322 >gi|254830567|ref|ZP_05235222.1| hypothetical protein Lmon1_04372 [Listeria monocytogenes 10403S] Length=422 Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 56/232 (25%), Positives = 93/232 (41%), Gaps = 29/232 (12%) Query 106 PVFAVAVVRETVGDRLLLNFHHAAFDGMGGLRLLLSLARAYAG---EPDEVGGPPIEEAR 162 P VVR D+L++ +H DG G L L+ Y+ PD + +R Sbjct 108 PQICFTVVRTESTDQLVIIMNHMLADGAGFKEYLYLLSELYSNLLENPDYAAKLSLG-SR 166 Query 163 NLKGVAGS------RDLFDVLIRARGLAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLTIE 216 +LK V + +F + + + P + P G P P+ ++ L E Sbjct 167 SLKQVFDQLSRKEIKSIFTEKTKQKAVHNPTL---------PLKGDPKNPKIIWTKLPKE 217 Query 217 SDEMATAVARRPEGATVNDLAMAALALTILQWNRTHDVPAADSVSVNMPVNFR---PTAW 273 + A+ ATVND+ A + T+LQ H+ +S++ PV+ R P+ Sbjct 218 NFSQILHYAKE-HDATVNDVLFATMVRTVLQTTGQHE------ISIDCPVDLRKYLPSKT 270 Query 274 STEVISNFASYLAIVLRVDEVTDLEKATAIVAGITGPLKQSGAAGWVVDLLE 325 S+ + + A+ + D++T E V P K S A + LLE Sbjct 271 SSGITNLTANITCQISTDDDLTSFESTLQAVKKSLDPQKNSLAPLRIYYLLE 322 >gi|302545684|ref|ZP_07298026.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC 53653] gi|302463302|gb|EFL26395.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC 53653] Length=373 Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 76/275 (28%), Positives = 102/275 (38%), Gaps = 25/275 (9%) Query 3 QTLRLTALDEMFITDDIDIVP-SVQIEARVSGRFDLDRLAAALRAAVAKHALARARLGRA 61 Q + +DE+ D P +V IE + GR + R A R A+ +H R Sbjct 21 QRIPFPTVDEISRHCLQDDEPETVHIEVHLPGRPEPGRWREAFREALRRHPRILVREAPG 80 Query 62 SLTARTLYWEVPDRADHLAVEITD---EPVGEVRSRFYARAPELHRSPVFAVAVVRET-- 116 R WEV D D V + + R R A P L SP + VV E Sbjct 81 RWWRRRYEWEVTDGPDVEPVSFPPCAADALARARERALAVCPPLTASPPVRLEVVTEPDR 140 Query 117 VGDRLLLNFHHAAFDGMGGLRLLLSLARAYAGEPDEVGGPPIEEARNLKGVAGSRDLFDV 176 G L+L +H A DG LR+L + A Y G + D Sbjct 141 TGCVLVLTVNHTALDGPSCLRVLATAAALYGGGDTPNTPNTPNTSAPPPTPPPVPDRSG- 199 Query 177 LIRARGLAKPAIDRKRTTRVAPDGGSP-DGPRFVFAPLTIESDEMATAVARRPEGATVND 235 ARGLA+P R+A D +P G + + L + A TVND Sbjct 200 ---ARGLARP-------VRIAKDTHTPRTGNAMLLSELPVPPRAPAPGG------PTVND 243 Query 236 LAMAALALTILQWNRTHDVPAADSVSVNMPVNFRP 270 + A L +WN H A V + MPV+ RP Sbjct 244 QLLVATCLMAARWNELHGR-APAPVRITMPVDDRP 277 >gi|16802483|ref|NP_463968.1| hypothetical protein lmo0439 [Listeria monocytogenes EGD-e] gi|224502268|ref|ZP_03670575.1| hypothetical protein LmonFR_07059 [Listeria monocytogenes FSL R2-561] gi|16409816|emb|CAC98518.1| lmo0439 [Listeria monocytogenes EGD-e] Length=422 Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 56/232 (25%), Positives = 93/232 (41%), Gaps = 29/232 (12%) Query 106 PVFAVAVVRETVGDRLLLNFHHAAFDGMGGLRLLLSLARAYAG---EPDEVGGPPIEEAR 162 P VVR D+L++ +H DG G L L+ Y+ PD + +R Sbjct 108 PQICFTVVRTESTDQLVIIMNHMLADGAGFKEYLYLLSELYSNLLENPDYAAKLSLG-SR 166 Query 163 NLKGVAGS------RDLFDVLIRARGLAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLTIE 216 +LK V + +F + + + P + P G P P+ ++ L E Sbjct 167 SLKQVFDQLSRKEIKSIFTEKTKQKAVHNPTL---------PLKGDPKNPKIIWTKLPKE 217 Query 217 SDEMATAVARRPEGATVNDLAMAALALTILQWNRTHDVPAADSVSVNMPVNFR---PTAW 273 + A+ ATVND+ A + T+LQ H+ +S++ PV+ R P+ Sbjct 218 NFSQILHYAKE-HDATVNDVLFATMVRTVLQTTGQHE------ISIDCPVDLRKYLPSKT 270 Query 274 STEVISNFASYLAIVLRVDEVTDLEKATAIVAGITGPLKQSGAAGWVVDLLE 325 S+ + + A+ + D++T E V P K S A + LLE Sbjct 271 SSGITNLTANITCQISTDDDLTSFESTLQAVKKSLDPQKNSLAPLRIYYLLE 322 >gi|255030182|ref|ZP_05302133.1| hypothetical protein LmonL_15841 [Listeria monocytogenes LO28] Length=411 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 56/232 (25%), Positives = 94/232 (41%), Gaps = 29/232 (12%) Query 106 PVFAVAVVRETVGDRLLLNFHHAAFDGMGGLRLLLSLARAYAG---EPDEVGGPPIEEAR 162 P VVR D+L++ +H DG G L L+ Y+ PD + +R Sbjct 97 PQICFTVVRTESTDQLVIIMNHMLADGAGFKEYLYLLSELYSNLLENPDYAAKLSLG-SR 155 Query 163 NLKGVAGS------RDLFDVLIRARGLAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLTIE 216 +LK V + +F + + + P + P G P P+ ++ L E Sbjct 156 SLKQVFDQLSRKEIKSIFTEKTKQKAVHNPTL---------PLKGDPKNPKIIWTKLPKE 206 Query 217 SDEMATAVARRPEGATVNDLAMAALALTILQWNRTHDVPAADSVSVNMPVNFR---PTAW 273 + A+ + ATVND+ A + T+LQ H+ +S++ PV+ R P+ Sbjct 207 NFSQILHYAKEHD-ATVNDVLFATMVRTVLQTTGQHE------ISIDCPVDLRKYLPSKT 259 Query 274 STEVISNFASYLAIVLRVDEVTDLEKATAIVAGITGPLKQSGAAGWVVDLLE 325 S+ + + A+ + D++T E V P K S A + LLE Sbjct 260 SSGITNLTANITCQISTDDDLTSFESTLQAVKKSLDPQKNSLAPLRIYYLLE 311 >gi|291442887|ref|ZP_06582277.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] gi|291345834|gb|EFE72738.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] Length=207 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 60/197 (31%), Positives = 82/197 (42%), Gaps = 27/197 (13%) Query 233 VNDLAMAALALTILQWNRTHDVPAAD--SVSVNMPVNFRPTAWSTEVISNFASYLAIVLR 290 +ND M A ALT+ WNR P AD + + MPV+ RP I N + + Sbjct 1 MNDQLMVATALTVADWNRAQGAPGADRRPLRITMPVDDRPRG-PEMPIGNGTRLVEVGFT 59 Query 291 VDEV-----------TDLEKATAIVAGITGPLKQSGAAGWVVDLLEGGKVLPAMLKRQLQ 339 EV T E+ A+ A P Q G ++ + +LP + L Sbjct 60 AAEVAAGADVAALLRTTAERTRALKAQ---PRPQLGHGAGLLTV----PLLPVAARAALT 112 Query 340 LLLPLVEDRFVESVCLSNLGRVDVPAFGGEAGDTTEVWFSPTAAMSVMPIGVGLV--GFG 397 L + + + LSN+GR+ P GEAG T VWFS A + MP G+ G Sbjct 113 RGLRVAAGPWTSTTLLSNIGRIPYPLDFGEAGRATAVWFS---APARMPRGLTFTTASTG 169 Query 398 GTLRAMFRGDGRTIGGE 414 G L R RT+ GE Sbjct 170 GRLHLALRWS-RTLLGE 185 >gi|217965460|ref|YP_002351138.1| hypothetical protein LMHCC_2186 [Listeria monocytogenes HCC23] gi|217334730|gb|ACK40524.1| conserved hypothetical protein [Listeria monocytogenes HCC23] gi|307569985|emb|CAR83164.1| conserved hypothetical protein [Listeria monocytogenes L99] gi|336022345|gb|AEH91482.1| putative a module of peptide synthetase [Listeria monocytogenes M7] Length=422 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 61/231 (27%), Positives = 92/231 (40%), Gaps = 27/231 (11%) Query 106 PVFAVAVVRETVGDRLLLNFHHAAFDGMGGLRLLLSLARAYAG---EPDEVGGPPIEEAR 162 P VVR D+L++ +H DG G L L+ Y+ PD V + +R Sbjct 108 PQICFTVVRTDTSDQLVVIMNHMLADGAGFKEYLYLLSELYSNLLENPDYVANLSL-GSR 166 Query 163 NLKGVAGSRDLFDVLIRARGLAKPAIDRKRTTRVA-----PDGGSPDGPRFVFAPLTIES 217 +LK V FD L +R K K + P G P P+ ++ L Sbjct 167 SLKQV------FDQL--SRNEIKSIFTEKTKQKAVHNPTFPLKGDPKNPKVIWTKLPKAH 218 Query 218 DEMATAVARRPEGATVNDLAMAALALTILQWNRTHDVPAADSVSVNMPVNFR---PTAWS 274 A+ E ATVND+ AA+A T+ Q +S++ PV+ R P+ S Sbjct 219 FSEIIHFAKEHE-ATVNDVLFAAMARTVQQ------TTGQQEMSIDCPVDLRKYLPSKTS 271 Query 275 TEVISNFASYLAIVLRVDEVTDLEKATAIVAGITGPLKQSGAAGWVVDLLE 325 + + + A+ + D++T E V P K S A + LLE Sbjct 272 SGITNLTANITCQISEDDDLTSFESTLQAVKNSLNPQKNSFAPLRIYYLLE 322 >gi|224499978|ref|ZP_03668327.1| hypothetical protein LmonF1_10004 [Listeria monocytogenes Finland 1988] Length=422 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 56/232 (25%), Positives = 93/232 (41%), Gaps = 29/232 (12%) Query 106 PVFAVAVVRETVGDRLLLNFHHAAFDGMGGLRLLLSLARAYAG---EPDEVGGPPIEEAR 162 P VVR D+L++ +H DG G L L+ Y+ PD + +R Sbjct 108 PQICFTVVRTESTDQLVIIMNHMLADGAGFKEYLYLLSELYSNLLENPDYAAKLSLG-SR 166 Query 163 NLKGVAGS------RDLFDVLIRARGLAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLTIE 216 +LK V + +F + + + P + P G P P+ ++ L E Sbjct 167 SLKQVFDQLSRKEIKSIFTEKTKQKAVHNPTL---------PLKGDPKNPKVIWTKLPKE 217 Query 217 SDEMATAVARRPEGATVNDLAMAALALTILQWNRTHDVPAADSVSVNMPVNFR---PTAW 273 + A+ ATVND+ A + T+LQ H+ +S++ PV+ R P+ Sbjct 218 NFSQILHYAKE-HDATVNDVLFATMVRTVLQTTGQHE------ISIDCPVDLRKYLPSKT 270 Query 274 STEVISNFASYLAIVLRVDEVTDLEKATAIVAGITGPLKQSGAAGWVVDLLE 325 S+ + + A+ + D++T E V P K S A + LLE Sbjct 271 SSGITNLTANITCQISTDDDLTSFESTLQAVKKSLDPQKNSLAPLRIYYLLE 322 >gi|226223070|ref|YP_002757177.1| module of peptide synthetase [Listeria monocytogenes Clip81459] gi|225875532|emb|CAS04235.1| Putative module of peptide synthetase [Listeria monocytogenes serotype 4b str. CLIP 80459] Length=422 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 60/231 (26%), Positives = 93/231 (41%), Gaps = 27/231 (11%) Query 106 PVFAVAVVRETVGDRLLLNFHHAAFDGMGGLRLLLSLARAYAG---EPDEVGGPPIEEAR 162 P VVR D+L++ +H DG G L L+ Y+ PD A Sbjct 108 PQICFTVVRADTSDQLVVIMNHMLADGAGFKEYLYLLSELYSNLLENPD--------YAA 159 Query 163 NLK-GVAGSRDLFDVLIRARGLAKPAIDRKRTTRVA----PDGGSPDGPRFVFAPLTIES 217 NL G + +FD L R + + ++ + V P G P P+ ++ L E Sbjct 160 NLSLGSRSLKQIFDQLSR-KDIKSIFTEKTKQKAVHNPTFPLKGDPKNPKVIWTKLPKED 218 Query 218 DEMATAVARRPEGATVNDLAMAALALTILQWNRTHDVPAADSVSVNMPVNFR---PTAWS 274 A+ E ATVND+ AA+A T+ Q +S++ PV+ R P+ S Sbjct 219 FSEIIHFAKEHE-ATVNDVLFAAMARTVQQ------TTGQQEMSIDCPVDLRKYLPSKTS 271 Query 275 TEVISNFASYLAIVLRVDEVTDLEKATAIVAGITGPLKQSGAAGWVVDLLE 325 + + + A+ + D++T E V P K S A + LLE Sbjct 272 SGITNLTANITCQISANDDLTSFESTLQAVKNSLNPQKNSFAPLRIYYLLE 322 >gi|47092507|ref|ZP_00230296.1| conserved hypothetical protein [Listeria monocytogenes str. 4b H7858] gi|254825747|ref|ZP_05230748.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] gi|254932760|ref|ZP_05266119.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] 8 more sequence titles Length=422 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 60/231 (26%), Positives = 93/231 (41%), Gaps = 27/231 (11%) Query 106 PVFAVAVVRETVGDRLLLNFHHAAFDGMGGLRLLLSLARAYAG---EPDEVGGPPIEEAR 162 P VVR D+L++ +H DG G L L+ Y+ PD A Sbjct 108 PQICFTVVRADTSDQLVVIMNHMLADGAGFKEYLYLLSELYSNLLENPD--------YAA 159 Query 163 NLK-GVAGSRDLFDVLIRARGLAKPAIDRKRTTRVA----PDGGSPDGPRFVFAPLTIES 217 NL G + +FD L R + + ++ + V P G P P+ ++ L E Sbjct 160 NLSLGSRSLKQIFDQLSR-KDIKSIFTEKTKQKAVHNPTFPLKGDPKNPKVIWTKLPKED 218 Query 218 DEMATAVARRPEGATVNDLAMAALALTILQWNRTHDVPAADSVSVNMPVNFR---PTAWS 274 A+ E ATVND+ AA+A T+ Q +S++ PV+ R P+ S Sbjct 219 FSEIIHFAKEHE-ATVNDVLFAAMARTVQQ------TTGQQEMSIDCPVDLRKYLPSKTS 271 Query 275 TEVISNFASYLAIVLRVDEVTDLEKATAIVAGITGPLKQSGAAGWVVDLLE 325 + + + A+ + D++T E V P K S A + LLE Sbjct 272 SGITNLTANITCQISADDDLTSFESTLQAVKNSLNPQKNSFAPLRIYYLLE 322 >gi|220928641|ref|YP_002505550.1| condensation domain-containing protein [Clostridium cellulolyticum H10] gi|219998969|gb|ACL75570.1| condensation domain protein [Clostridium cellulolyticum H10] Length=482 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 62/259 (24%), Positives = 113/259 (44%), Gaps = 35/259 (13%) Query 24 SVQIEA--RVSGRFDLDRLAAALRAAVAKHALARARLGRASLTARTLYWEVPDRADHLAV 81 ++QI+A +++GR D D+L A+R ++ + + LG + R YW+ D D + Sbjct 68 NLQIQAIMKLNGRLDFDKLKQAVRLSIIEEPV----LGCRFIEDRKPYWKPLDNIDMINF 123 Query 82 EITDEP--VGEVRSRFYARAPELHRSPVFAVAVVRETVGDRLLLNFHHAAFDGMGGLRLL 139 +E + + F + +L + P+ V+++R + D L + +HA DG+G + Sbjct 124 CTLEEAEDMEQAIHNFIRGSIDLDKDPMVNVSLIRSSRTDVLAIKMNHACCDGIGTQEYI 183 Query 140 LSLARAYAGEPDEVGGPPIEEARNLKGVAGSRDLFDVLIRARGLAKPAIDRKRTTRVAPD 199 LA Y+ D I E R +AG +D + R A+ I + + + Sbjct 184 KLLADKYSNL-DLKNDTFISEPR----IAGRKD------QDRMFAELGITNQDSIFIP-- 230 Query 200 GGSPDGPRFVFAPLTIESDEMATAVARRP-------------EGATVNDLAMAALALTIL 246 G P + F S+ +V+R P +GATVND + A +L Sbjct 231 GSDISVPTWPFPWEQSGSNTTLMSVSRLPAEHLESISKYAKSKGATVNDYILTAYYRAML 290 Query 247 QWNR-THDVPAADSVSVNM 264 + R + +P V+V++ Sbjct 291 RMGRPIYGMPMEIPVTVDL 309 >gi|313634859|gb|EFS01271.1| putative condensation protein [Listeria seeligeri FSL N1-067] Length=422 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 55/229 (25%), Positives = 95/229 (42%), Gaps = 23/229 (10%) Query 106 PVFAVAVVRETVGDRLLLNFHHAAFDGMGGLRLLLSLARAYAGEPDEVGGPPIEEARNLK 165 P + V+R D+L++ +H DG G + L L+ Y+ ++ P + + Sbjct 108 PQIRLTVIRTKTSDQLVIILNHMLADGAGFKQYLYLLSDLYS----KLLENPEYQVKLSP 163 Query 166 GVAGSRDLFDVLIRARGLAKPAIDRKRTTRVAPD---GGSPDGPRFVFAPLTIESDEMAT 222 G G + +FD R + + + P G + P+ ++ + + Sbjct 164 GSRGLKQVFDQFSRKQKQEILTKQKNQPPVQNPKIQLQGDANNPKIIWTKTSKQQFVSLI 223 Query 223 AVARRPEGATVNDLAMAALALTILQWNRTHDVPAADSVSVNMPVNFRP------TAWSTE 276 + A++ ATVND+ A+ALTI H V ++S++ PV+ R T T Sbjct 224 SYAKK-HDATVNDVFFTAMALTI------HQVTGQTAMSIDCPVDLRKYLPKNRTPGITN 276 Query 277 VISNFASYLAIVLRVDEVTDLEKATAIVAGITGPLKQSGAAGWVVDLLE 325 + +N +A D +T E+ IV P K S AA + LLE Sbjct 277 LTANITCQIA---ATDSLTSFEETLKIVKKSLQPQKNSLAALRIYYLLE 322 >gi|254828928|ref|ZP_05233615.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] gi|258601339|gb|EEW14664.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] Length=422 Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 62/231 (27%), Positives = 92/231 (40%), Gaps = 27/231 (11%) Query 106 PVFAVAVVRETVGDRLLLNFHHAAFDGMGGLRLLLSLARAYAG---EPDEVGGPPIEEAR 162 P VVR D+L++ +H DG G L L+ Y+ PD V + +R Sbjct 108 PQICFTVVRTESTDQLVIIMNHMLADGAGFKEYLYLLSELYSNLLENPDYVANLSL-GSR 166 Query 163 NLKGVAGSRDLFDVLIRARGLAKPAIDRKRTTRVA-----PDGGSPDGPRFVFAPLTIES 217 +LK V FD L +R K K + P G P P+ ++ L Sbjct 167 SLKQV------FDQL--SRNEIKSIFTEKTKQKAVHNPTFPLKGDPKNPKVIWTKLPKAH 218 Query 218 DEMATAVARRPEGATVNDLAMAALALTILQWNRTHDVPAADSVSVNMPVNFR---PTAWS 274 A+ E ATVND+ AA+A T+ Q +S++ PV+ R P+ S Sbjct 219 FSEIIHFAKEHE-ATVNDVLFAAMARTVQQ------TTGQQEMSIDCPVDLRKYLPSKTS 271 Query 275 TEVISNFASYLAIVLRVDEVTDLEKATAIVAGITGPLKQSGAAGWVVDLLE 325 + + + A+ V D++T E V P K S A + LLE Sbjct 272 SGITNLTANITCQVSADDDLTSFESTLQAVKNSLNPQKNSFAPLRIYYLLE 322 >gi|313620488|gb|EFR91856.1| conserved hypothetical protein [Listeria innocua FSL S4-378] Length=427 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 72/304 (24%), Positives = 121/304 (40%), Gaps = 29/304 (9%) Query 33 GRFDLDRLAAALRAAVAKHALARARLGRASLTARTLYWE--VPDRADHLAVEITDEPVGE 90 ++D L A+ + K L T + +W+ V D + + T EP E Sbjct 37 NHLNIDVLKKAVMQSTKKLPLLLCHFKE---TNKGAFWQESVFSAEDLVFLIKTTEPEAE 93 Query 91 VRSRFYARAPELHRSPVFAVAVVRETVGDRLLLNFHHAAFDGMGGLRLLLSLARAYAGEP 150 V +R R P + V+R D+L++ +H DG G L L+ Y+ Sbjct 94 V-NRALVRKLSTENGPQIRLTVIRTESADKLVIILNHMLADGAGFKEYLYLLSELYSK-- 150 Query 151 DEVGGPPIEEARNLKGVAGSRDLFDVLIRARGLAKPAIDRKRTTRVA------PDGGSPD 204 + P + +L GSR+L V + I ++T R P G P Sbjct 151 -LLENPNYQANLSL----GSRNLKQVFDQFSRKEIKTIFTEKTNRKTVYNPPFPLKGDPK 205 Query 205 GPRFVFAPLTIESDEMATAVARRPEGATVNDLAMAALALTILQWNRTHDVPAADSVSVNM 264 P+ ++ L E + A+ + ATVND+ AA+ + Q TH + +S++ Sbjct 206 NPKIIWTKLPKEVFDGIVHYAKEND-ATVNDVFFAAMVRIVQQ--TTHQ----NELSIDC 258 Query 265 PVNFRPT--AWSTEVISNFASYLAIVLRV-DEVTDLEKATAIVAGITGPLKQSGAAGWVV 321 PV+ R +++ I+N + + + D++T E V P K S A + Sbjct 259 PVDLRKYLPGKASQGITNLTANITCQINANDDLTSFESTLQAVKNSLNPQKNSLAPLRIY 318 Query 322 DLLE 325 LLE Sbjct 319 YLLE 322 >gi|16799536|ref|NP_469804.1| hypothetical protein lin0460 [Listeria innocua Clip11262] gi|16412901|emb|CAC95692.1| lin0460 [Listeria innocua Clip11262] Length=427 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 73/304 (25%), Positives = 121/304 (40%), Gaps = 29/304 (9%) Query 33 GRFDLDRLAAALRAAVAKHALARARLGRASLTARTLYWE--VPDRADHLAVEITDEPVGE 90 ++D L A+ + K R L T + +W+ V D + + T EP E Sbjct 37 NHLNIDVLKKAVMQSTKK---LRLLLCHFKETNKGAFWQESVFSAEDLVFLIKTTEPEAE 93 Query 91 VRSRFYARAPELHRSPVFAVAVVRETVGDRLLLNFHHAAFDGMGGLRLLLSLARAYAGEP 150 V +R R P + VVR D+L++ +H DG G L L+ Y+ Sbjct 94 V-NRALVRKLSTENGPQIRLTVVRTESADKLVIILNHMLADGAGFKEYLYLLSELYSK-- 150 Query 151 DEVGGPPIEEARNLKGVAGSRDLFDVLIRARGLAKPAIDRKRTTRVA------PDGGSPD 204 + P + +L GSR+L V + I ++T R P G P Sbjct 151 -LLENPNYQANLSL----GSRNLKQVFDQFSRKEIKTIFTEKTNRKTVYNPPFPLKGDPK 205 Query 205 GPRFVFAPLTIESDEMATAVARRPEGATVNDLAMAALALTILQWNRTHDVPAADSVSVNM 264 P+ ++ L E + A+ + ATVND+ AA+ + Q TH + +S++ Sbjct 206 NPKIIWTKLPKEVFDGIVHYAKEND-ATVNDVFFAAMVRIVQQ--TTHQ----NELSIDC 258 Query 265 PVNFRPT--AWSTEVISNFASYLAIVLRV-DEVTDLEKATAIVAGITGPLKQSGAAGWVV 321 PV+ R +++ I+N + + + D++T E V P K S + Sbjct 259 PVDLRKYLPGKASQGITNLTANITCQINANDDLTSFESTLQAVKNSLNPQKNSLTPLRIY 318 Query 322 DLLE 325 LLE Sbjct 319 YLLE 322 >gi|327543447|gb|EGF29869.1| protein containing Condensation domain [Rhodopirellula baltica WH47] Length=443 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 102/456 (23%), Positives = 168/456 (37%), Gaps = 69/456 (15%) Query 1 MTQTLRLTALDEMFITDDIDIVPS-VQIEARVSGRFDLDRLAAALRAAVAKHALARARLG 59 M+ T LT +E+ + D + P+ + R GR D AA AVA+H L AR+ Sbjct 1 MSLTYPLTHFEELMLHQDSNAFPTNCFVRMRFRGRLDETGFRAAALTAVARHPLLHARVQ 60 Query 60 RASLTARTLYWEV--PDRADHLAVEITDEPVGEVRSRFYARAPELHRSPVFAVAVVRETV 117 R +W V P+ + + DE R L AV Sbjct 61 RHR---GRYHWHVDEPNPSISWCDQANDEQPA-------FRRLNLESEHGLKFAVCLHEH 110 Query 118 GDRLLLNFHHAAFDGMGGLRLLLSLARAYAGEPDEVGGPPIEEA-----RNLKGV----- 167 L++ FHHA DG+ +++ L AYA + DE G + E +N + Sbjct 111 ESELMVQFHHACCDGLAIFQVVHELLLAYAMQVDEKAGVSLPEVDLSLLQNRGSIGLTTG 170 Query 168 ----------AGSRDLFDVLIRARGLAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLTIES 217 G R ++ L R P RV P P P F Sbjct 171 SFLRLASRQAVGLRGVWQFLTRKPSHLLP-------HRV-PQRDEPAPPSFPSVIAHHFQ 222 Query 218 DEMATAVARRPEGATV--NDLAMAALALTILQWNRTHDV--PAADSVSVNMPVNFRPTAW 273 +++ V R + A V NDL + L L + ++ ++H V P A + + +PV+ R Sbjct 223 PDVSAGVRRAAKLAKVTQNDLLIRDLFLALEEFRQSHGVHDPTA-WLRLMIPVSMRRKHQ 281 Query 274 STEVISNFASYLAIVLRVDEVTDLEKATAIVAGITGPLKQSGAAGWVVDLLEGGKVLPAM 333 +N S + + RV ++ + E ++ +K + L ++LP Sbjct 282 YQAPAANIVSSVFLDRRVIDMEEPEHLLQDLSEEMSLIKHRQLNHLFLYSLWAQRMLPRG 341 Query 334 LKRQLQLLLPLVEDRFVESVCLSNLGRV----DVPAFGG--EAGDTTEVWFSPTAAMSVM 387 L+R + R +V +NL RV +P G + GD + + ++ Sbjct 342 LQRTAR------PKRCQTTVVFTNLSRVFARSPLPRIDGRLQCGDVVLL-----SVEAIP 390 Query 388 PI------GVGLVGFGGTLRAMFRGDGRTIGGEALG 417 PI +G+ + + D R + EA G Sbjct 391 PIARHLNAALGVSWYANQMTITLHHDPRAVSHEAAG 426 >gi|313610662|gb|EFR85732.1| putative condensation protein [Listeria monocytogenes FSL F2-208] Length=422 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 60/232 (26%), Positives = 94/232 (41%), Gaps = 29/232 (12%) Query 106 PVFAVAVVRETVGDRLLLNFHHAAFDGMGGLRLLLSLARAYAG---EPDEVGGPPIEEAR 162 P VVR D+L++ +H DG G L L+ Y+ PD + +R Sbjct 108 PQICFTVVRTDTSDQLVVIMNHMLADGAGFKEYLYLLSELYSNLLENPDYSANLSL-GSR 166 Query 163 NLKGVAGSRDLFDVLIRARGLAKPAIDRKRTTRVA------PDGGSPDGPRFVFAPLTIE 216 +LK V FD L R +I ++T + A P G P P+ ++ L Sbjct 167 SLKQV------FDQLSRKEI---KSIFTEKTKQKAVHNPTFPLKGDPKNPKVIWTKLPKT 217 Query 217 SDEMATAVARRPEGATVNDLAMAALALTILQWNRTHDVPAADSVSVNMPVNFR---PTAW 273 + A+ E ATVND+ AA+A + Q +S++ PV+ R P+ Sbjct 218 NFSEIIHFAKEHE-ATVNDVLFAAMARAVQQ------TTGQQEMSIDCPVDLRKYLPSKT 270 Query 274 STEVISNFASYLAIVLRVDEVTDLEKATAIVAGITGPLKQSGAAGWVVDLLE 325 S+ + + A+ + D++T E V P K S A + LLE Sbjct 271 SSGITNLTANITCQISEDDDLTSFESTLQAVKNSLNPQKNSFAPLRIYYLLE 322 >gi|313625044|gb|EFR94925.1| conserved hypothetical protein [Listeria innocua FSL J1-023] Length=427 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 64/251 (26%), Positives = 103/251 (42%), Gaps = 24/251 (9%) Query 84 TDEPVGEVRSRFYARAPELHRSPVFAVAVVRETVGDRLLLNFHHAAFDGMGGLRLLLSLA 143 T EP EV +R R P + VVR D+L++ +H DG G L L+ Sbjct 87 TTEPETEV-NRALVRKLSTENGPQIRLTVVRTESADKLVIILNHMLADGAGFKEYLYLLS 145 Query 144 RAYAGEPDEVGGPPIEEARNLKGVAGSRDLFDVLIRARGLAKPAIDRKRTTRVA------ 197 Y+ + P + +L GSR+L V + I ++T R Sbjct 146 ELYSK---LLENPNYQANLSL----GSRNLKQVFDQFSRKEIKTIFTEKTNRKTVYNPPF 198 Query 198 PDGGSPDGPRFVFAPLTIESDEMATAVARRPEGATVNDLAMAALALTILQWNRTHDVPAA 257 P G P P+ ++ L E + A+ + ATVND+ AA+ I Q TH Sbjct 199 PLKGDPKNPKVIWTKLPKEIFDGIVHYAKEND-ATVNDVFFAAMVRIIQQ--TTH----Q 251 Query 258 DSVSVNMPVNFRPTA--WSTEVISNFASYLAIVLRV-DEVTDLEKATAIVAGITGPLKQS 314 + +S++ PV+ R +++ I+N + + + D+++ E V P K S Sbjct 252 NELSIDCPVDLRKYLPDKASQGITNLTANITCQINANDDLSSFESTLQTVKNSLNPQKNS 311 Query 315 GAAGWVVDLLE 325 A + LLE Sbjct 312 LAPLRIYYLLE 322 >gi|327542335|gb|EGF28822.1| hypothetical protein RBWH47_05226 [Rhodopirellula baltica WH47] Length=472 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 82/348 (24%), Positives = 134/348 (39%), Gaps = 43/348 (12%) Query 11 DEMFITDDIDIVPSVQ-IEARVSGRFDLDRLAAALRAAVAKHALARARLGRASLTARTLY 69 + F+ D+ + P V IE + S L L AL V H L +L R + Sbjct 19 ETFFVLDEKESCPIVMLIELQFSTPLQLPVLQNALNETVKDHPLLACKLVRH---GERFF 75 Query 70 WEV-----PDRADHLAVEITDEPVGEVRSRFYARAPELHRSPVFAVAVVRETVGDRLLLN 124 W P + + +T P +++ + +L R V G RL + Sbjct 76 WHFDQDLAPRVLTNEDLPLTTGPANNPQTQPF----DLFRESGCRFWYVPAETGSRLYVQ 131 Query 125 FHHAAFDGMGGLRLLLSLARAYA---GEPDEVGGPPIEEAR---NLKGVAGSRDLFDVLI 178 HHA DG+G ++L+ YA G+P E G + +R N + + D ++L Sbjct 132 LHHACGDGVGMRQVLVGTLTRYARATGDP-ECGKTSRKSSRSAPNPERLRDRNDFSELLS 190 Query 179 RARGLAKPAIDRKRTTRV----------APDGG------SPDGPRFVFAPL--TIESDEM 220 + + DR R P G P + + PL + S E Sbjct 191 KPPKRSLTTWDRIRNAYYFHFQRPAALSTPRGSGSTSTQQPPESQAISRPLRHVLFSKEE 250 Query 221 ATAVARRPEGAT--VNDLAMAALALTILQWNRTHDVPAADSVSVNMPVNFRPTAWSTEVI 278 + ++ + A+ VNDLA+A L T QW ++H A V MPV+ R Sbjct 251 SASIEKACSNASIRVNDLAIAMLFQTFEQWEQSHGGGNAIRYRVMMPVDLRSRKDLDLPA 310 Query 279 SNFASYLAIVLRVDEVTDLEKATAIVAGITGPLKQSGAAGWVVDLLEG 326 +N S+ + R D+ D + + VA +K++ +D L+G Sbjct 311 TNRLSFAFLGRRKDQCQDPDALISSVADEVVAIKETRVH---MDFLDG 355 >gi|47096462|ref|ZP_00234055.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a F6854] gi|254900615|ref|ZP_05260539.1| hypothetical protein LmonJ_12404 [Listeria monocytogenes J0161] gi|254913684|ref|ZP_05263696.1| conserved hypothetical protein [Listeria monocytogenes J2818] gi|254937985|ref|ZP_05269682.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|47015183|gb|EAL06123.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a F6854] gi|258610597|gb|EEW23205.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|293591697|gb|EFG00032.1| conserved hypothetical protein [Listeria monocytogenes J2818] Length=422 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 60/233 (26%), Positives = 91/233 (40%), Gaps = 31/233 (13%) Query 106 PVFAVAVVRETVGDRLLLNFHHAAFDGMGGLRLLLSLARAYAGEPDEVGGPPIEEARNLK 165 P VVR D+L++ +H DG G L L+ Y+ NL Sbjct 108 PQICFTVVRTDTSDQLVVIMNHMLADGAGFKEYLYLLSELYSN-----------LLENLD 156 Query 166 GVA----GSRDLFDVLIRARGLAKPAIDRKRTTRVA------PDGGSPDGPRFVFAPLTI 215 VA GSR L V + +I ++T + A P G P P+ ++ L Sbjct 157 YVANLSLGSRSLKQVFNQLSRNEIKSIFTEKTKQKAVHNPTFPLKGDPKNPKVIWTKLPK 216 Query 216 ESDEMATAVARRPEGATVNDLAMAALALTILQWNRTHDVPAADSVSVNMPVNFR---PTA 272 A+ E ATVND+ AA+A T+ Q +S++ PV+ R P+ Sbjct 217 AHFSEIIHFAKEHE-ATVNDVLFAAMARTVQQ------TTGQQEMSIDCPVDLRKYLPSK 269 Query 273 WSTEVISNFASYLAIVLRVDEVTDLEKATAIVAGITGPLKQSGAAGWVVDLLE 325 S+ + + A+ + D++T E V P K S A + LLE Sbjct 270 TSSGITNLTANITCQISADDDLTSFESTLQAVKNSLNPQKNSFAPLRIYYLLE 322 >gi|255016955|ref|ZP_05289081.1| hypothetical protein LmonF_02383 [Listeria monocytogenes FSL F2-515] Length=406 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 59/232 (26%), Positives = 94/232 (41%), Gaps = 29/232 (12%) Query 106 PVFAVAVVRETVGDRLLLNFHHAAFDGMGGLRLLLSLARAYAG---EPDEVGGPPIEEAR 162 P VVR D+L++ +H DG G L L+ Y+ PD + +R Sbjct 92 PQICFTVVRTDTSDQLVVIMNHMLADGAGFKEYLYLLSELYSNLLENPDYAANLSL-GSR 150 Query 163 NLKGVAGSRDLFDVLIRARGLAKPAIDRKRTTRVA------PDGGSPDGPRFVFAPLTIE 216 +LK V FD L R +I ++T + A P G P P+ ++ L Sbjct 151 SLKQV------FDQLSRKEI---KSIFTEKTKQKAVHNPTFPLKGDPKNPKVIWTKLAKA 201 Query 217 SDEMATAVARRPEGATVNDLAMAALALTILQWNRTHDVPAADSVSVNMPVNFR---PTAW 273 A+ E ATVND+ AA+A T+ Q + ++ PV+ R P+ Sbjct 202 HFSEIIHFAKEHE-ATVNDVLFAAMARTVQQ------TTGQQEMLIDCPVDLRKYLPSKT 254 Query 274 STEVISNFASYLAIVLRVDEVTDLEKATAIVAGITGPLKQSGAAGWVVDLLE 325 S+ + + A+ + + D++T E +V K S A + LLE Sbjct 255 SSGITNLTANITCQISKDDDLTSFESTLQVVKNSLNSQKNSFAPLRIYYLLE 306 >gi|32475996|ref|NP_868990.1| hypothetical protein RB9631 [Rhodopirellula baltica SH 1] gi|32446540|emb|CAD76375.1| hypothetical protein RB9631 [Rhodopirellula baltica SH 1] Length=443 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 100/449 (23%), Positives = 171/449 (39%), Gaps = 55/449 (12%) Query 1 MTQTLRLTALDEMFITDDIDIVPS-VQIEARVSGRFDLDRLAAALRAAVAKHALARARLG 59 M+ T LT +E+ + D + P+ + R G D A AVA+H L AR+ Sbjct 1 MSLTYPLTHFEELMLHQDSNAFPTNCFVRMRFRGCLDETGFRTAALTAVARHPLLHARVQ 60 Query 60 RASLTARTLYWEV--PDRADHLAVEITDEPVGEVRSRFYARAPELHRSPVFAVAVVRETV 117 R +W V P+ + + DE R +L AV Sbjct 61 RHR---GRYHWHVDEPNPSITWCDQANDEQPA-------FRRLDLESEHGLKFAVCLHEH 110 Query 118 GDRLLLNFHHAAFDGMGGLRLLLSLARAYAGEPDEVGGPPIEEA-----RNLKGVAGSRD 172 L++ FHHA DG+ +++ L AYA + DE G + E +N + +R Sbjct 111 ESELMVQFHHACCDGLAIFQVVHELLLAYAMQVDEKAGVSLPEIDLSLLQNRGSIGLTRG 170 Query 173 LFDVL-----IRARGLAKPAIDRKRTTRV---APDGGSPDGPRFVFAPLTIESDEMATAV 224 F L + RG+ + + RK + + P P P F +++ V Sbjct 171 SFLRLASRQAVGLRGVWQ-FLTRKPSQLLPHRVPQRDEPAPPSFPSVIAHHFQPDVSAGV 229 Query 225 ARRPEGATV--NDLAMAALALTILQWNRTHDV--PAADSVSVNMPVNFRPTAWSTEVISN 280 R + A V NDL + L L + ++ R+H V P A + + +PV+ R +N Sbjct 230 RRAAKLAKVTQNDLLIRDLFLALEEFRRSHGVHDPTA-WLRLMIPVSMRRKHQYQAPAAN 288 Query 281 FASYLAIVLRVDEVTDLEKATAIVAGITGPLKQSGAAGWVVDLLEGGKVLPAMLKRQLQL 340 S + + R ++ + E ++ +K + L ++LP L+R + Sbjct 289 IVSSVFLDRRAIDMEEPEHLLQDLSEEMSLIKHRQLNHLFLYSLWAQRMLPQGLQRTAR- 347 Query 341 LLPLVEDRFVESVCLSNLGRV----DVPAFGG--EAGDTTEVWFSPTAAMSVMPI----- 389 R +V +NL RV +P G + GD + + ++ PI Sbjct 348 -----PKRCQTTVVFTNLSRVFARSPLPRIDGRLQCGDVVLL-----SVEAIPPIARHLN 397 Query 390 -GVGLVGFGGTLRAMFRGDGRTIGGEALG 417 +G+ + + D R + EA G Sbjct 398 AALGVSWYANQMTITLHHDPRAVSHEAAG 426 >gi|339010005|ref|ZP_08642576.1| putative linear gramicidin synthase subunit C [Brevibacillus laterosporus LMG 15441] gi|338773275|gb|EGP32807.1| putative linear gramicidin synthase subunit C [Brevibacillus laterosporus LMG 15441] Length=6392 Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats. Identities = 57/254 (23%), Positives = 100/254 (40%), Gaps = 35/254 (13%) Query 61 ASLTARTLYWEVPDRADHLAVEITDEPVGEVRSRFYARAPELHRSPVFAVAVVRETVGDR 120 AS T + + +AV I E +R + LH+ P+ + + + T GD Sbjct 3687 ASFTIEVIDLLEESNEEQVAVRIEQEA-----NRIQSSMGLLHQGPLVKLGLFKTTEGDH 3741 Query 121 LLLNFHHAAFDGMGGLRLLLSLARAYA----GEPDEVGGPPI---EEARNLKGVAGSRDL 173 LL+ HH DG+ LL Y GEP + E A+ L+ + S++L Sbjct 3742 LLIAIHHLVIDGVSWRILLEDFTTGYEQAQNGEPIVFPAKTVSLQEWAKRLEDYSTSKEL 3801 Query 174 FDVLIRARGLAKPAIDRKRTTRVAPDGGSPDGPRFVFAPLTIESDEMATAV----ARRPE 229 L + +ID T + D + L++E E TA+ R Sbjct 3802 LREKSYWDQLEQTSIDPIPTDFITSHNRMKDS-----STLSMELSETDTALLLTDVHRAY 3856 Query 230 GATVNDLAMAALALTILQWNRTHDVP------AADSVSVNMPVNFRPTAWSTEVISNFAS 283 +ND+ + AL +T+ +W +D+ + + + +N R W F S Sbjct 3857 RTEMNDILLTALGITLKEWTSNNDIAILLEGHGREDIMEEIDIN-RTIGW-------FTS 3908 Query 284 YLAIVLRVDEVTDL 297 ++L + +V+D+ Sbjct 3909 AFPVLLPMSKVSDI 3922 Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 53/230 (24%), Positives = 84/230 (37%), Gaps = 37/230 (16%) Query 74 DRADHLAVEITDEPVGEV-RSRFYARAPELHRS-------PVFAVAVVRETVGDRLLLNF 125 DR D +++TDE V + + A L S P+ + + + T GD LL+ Sbjct 1120 DRFDFEIIDLTDETNESVIKDQMKQHADRLQTSIDLENQGPLVKIGLFKTTSGDHLLIVI 1179 Query 126 HHAAFDGMGGLRLLLSLARAYA----GEPDEVGGPPI---EEARNLKGVAGSRDLFDVLI 178 HH DG+ LL L+ Y+ GE + + E + L+ A S+ Sbjct 1180 HHLVIDGVSWRILLEDLSTGYSQAARGEALLLPAKTVSFKEWSNQLQSYAASKAFLK--- 1236 Query 179 RARGLAKPAIDRKRTTRVAP---DGGSPDGPRF----VFAPLTIESDEMATAVARRPEGA 231 KP + T + P DG + + + LT + + Sbjct 1237 -----EKPYWRQLEQTTIQPLPTDGPITNNLKMDSSDIHIELTPQQTKQLLKDVHHAYHT 1291 Query 232 TVNDLAMAALALTILQWNRTHDV------PAADSVSVNMPVNFRPTAWST 275 +NDL + AL LT+ W +V + + NM V R W T Sbjct 1292 EINDLLLTALGLTVKNWTGEENVLLLLEGHGREDIMANMDVT-RTIGWFT 1340 Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats. Identities = 34/127 (27%), Positives = 60/127 (48%), Gaps = 9/127 (7%) Query 27 IEARVSGRFDLDRLAAALRAAVAKHALARARLGRASLTARTLYWEVPDRADHLAVEI-TD 85 I R+SG + RL ++ R + +H R R + E HL + ++ Sbjct 5164 IALRLSGDIEAARLESSFRELINRHESLRTSFDWTDGQMRQIVHE--SAMFHLVHTVGSE 5221 Query 86 EPVGEVRSRFYARAPELHRSPVFAVAVVRETVGDR---LLLNFHHAAFDGMGGLRLLLSL 142 + ++ S F + +L+++P+ +V T D+ LLL+ HH+ DG+ +L L Sbjct 5222 DECNQIVSTF-TQPFDLNQAPLLRAHLV--TYKDKEHLLLLDMHHSISDGVSMSIILTEL 5278 Query 143 ARAYAGE 149 A+ YAGE Sbjct 5279 AKIYAGE 5285 >gi|121717280|ref|XP_001276062.1| nonribosomal peptide synthase, putative [Aspergillus clavatus NRRL 1] gi|119404219|gb|EAW14636.1| nonribosomal peptide synthase, putative [Aspergillus clavatus NRRL 1] Length=3502 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 59/240 (25%), Positives = 103/240 (43%), Gaps = 34/240 (14%) Query 30 RVSGRFDLDRLAAALRAAVAKHALARARLGRASLTARTLYWEVPDRADHLAVEITDEPVG 89 R+ FD +RL AL+A V KH++ R +L T+ V R + ++I +P Sbjct 3115 RLPASFDHERLQHALQAVVMKHSILRTVF--VNLPGMTVLQLVHSRT-QVQIQIIQDPNN 3171 Query 90 EVR--SRFYARAPELHRSPVFAVAVVRETVG--DRLLLNFHHAAFDGMGGLRLLLSLARA 145 ++ R A +P + F +VR + G + L+L HA +DG+ LL ++ Sbjct 3172 DIEDICREDASSPVPYGGQYFRPILVRTSSGQDNTLILRLSHAQYDGLSLPILLRDISTY 3231 Query 146 YAGEPDEVGGPPIEEARNLKGVAGSRDLFDVLIRARGLAKPAI-DRKR-------TTRVA 197 Y+ +P EV ++ + D + R + PA+ D R TR++ Sbjct 3232 YSNDPSEVD----------IALSTQKTFADFVTRRAQMQTPAVFDFWRELLLGSSMTRLS 3281 Query 198 PD---GGSPDGPRFVFAPLTIESDEMATAVARRPEGATVNDLAMAALALTILQWNRTHDV 254 PD D P ++I +M ++ P G T+ L A A+ + + +HD+ Sbjct 3282 PDTLGAAGHDMPE-----VSIFRKKM-ISMPTLPAGVTLATLHKAVWAIALSRMVSSHDI 3335 >gi|32476214|ref|NP_869208.1| hypothetical protein RB10038 [Rhodopirellula baltica SH 1] gi|32446758|emb|CAD76594.1| hypothetical protein RB10038 [Rhodopirellula baltica SH 1] Length=476 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 81/348 (24%), Positives = 132/348 (38%), Gaps = 43/348 (12%) Query 11 DEMFITDDIDIVPSVQ-IEARVSGRFDLDRLAAALRAAVAKHALARARLGRASLTARTLY 69 + F+ D+ + P V IE + S L L AL V H L +L R + Sbjct 23 ETFFVLDEKESCPIVSFIELQFSTPLQLPVLQNALNETVKDHPLLACKLVRH---GERFF 79 Query 70 WEV-----PDRADHLAVEITDEPVGEVRSRFYARAPELHRSPVFAVAVVRETVGDRLLLN 124 W P + + +T P ++ + +L R V G RL + Sbjct 80 WHFDQDLAPRVLTNEDLPLTTGPANNPLTQPF----DLFRESGCRFWYVPAETGSRLYVQ 135 Query 125 FHHAAFDGMGGLRLLLSLARAYA---GEPDEVGGPPIEEAR---NLKGVAGSRDLFDVLI 178 HHA DG+G ++L+ YA G+P E G + +R N + + D ++L Sbjct 136 LHHACGDGVGMRQVLVGTLTRYARATGDP-ECGKTSRKSSRSAPNPERLRDRNDFSELLS 194 Query 179 RARGLAKPAIDRKRTTRV----------APDGG------SPDGPRFVFAPL--TIESDEM 220 + + DR R P G P + + PL + S E Sbjct 195 KPPKRSLTTWDRIRNAYYFHFQRPAALSTPRGSGSTSTQQPPESQAISRPLRHILFSKEE 254 Query 221 ATAVARRPEGAT--VNDLAMAALALTILQWNRTHDVPAADSVSVNMPVNFRPTAWSTEVI 278 + ++ + A+ VNDLA+A L T W ++H A V MPV+ R Sbjct 255 SASIEKACSNASIRVNDLAIAMLFQTFEHWEQSHGGGKAIRYRVMMPVDLRSRKDLDLPA 314 Query 279 SNFASYLAIVLRVDEVTDLEKATAIVAGITGPLKQSGAAGWVVDLLEG 326 +N S+ + R D+ D + + VA +K++ +D L+G Sbjct 315 TNRLSFAFLGRRKDQCQDRDALISSVADEVVAIKETRVH---MDFLDG 359 >gi|290892401|ref|ZP_06555395.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] gi|290557967|gb|EFD91487.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] Length=422 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 56/229 (25%), Positives = 89/229 (39%), Gaps = 23/229 (10%) Query 106 PVFAVAVVRETVGDRLLLNFHHAAFDGMGGLRLLLSLARAYAGEPDEVGGPPIEEARNLK 165 P VVR D+L++ +H DG G L L+ Y+ + ++ NL Sbjct 108 PQICFTVVRTDTSDQLVVIMNHMLADGAGFKEYLYLLSELYSNLLEN-----LDYVENLS 162 Query 166 -GVAGSRDLFDVLIRARGLAKPAIDRKRTTRVA-----PDGGSPDGPRFVFAPLTIESDE 219 G + +FD L +R K K + P G P P+ ++ L Sbjct 163 LGSRSLKQVFDQL--SRNEIKSIFTEKTKQKAVHNPTFPLKGDPKNPKVIWTKLPKAHFS 220 Query 220 MATAVARRPEGATVNDLAMAALALTILQWNRTHDVPAADSVSVNMPVNFR---PTAWSTE 276 A+ E ATVND+ AA+A T+ Q +S++ PV+ R P+ S+ Sbjct 221 EIIHFAKEHE-ATVNDVLFAAMARTVQQ------TTGQQEMSIDCPVDLRKYLPSKTSSG 273 Query 277 VISNFASYLAIVLRVDEVTDLEKATAIVAGITGPLKQSGAAGWVVDLLE 325 + + A+ + D++T E V K S A + LLE Sbjct 274 ITNLTANITCQISADDDLTSFESTLQAVKNSLNSQKNSFAPLRIYYLLE 322 >gi|336177511|ref|YP_004582886.1| condensation domain-containing protein [Frankia symbiont of Datisca glomerata] gi|334858491|gb|AEH08965.1| condensation domain protein [Frankia symbiont of Datisca glomerata] Length=565 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 128/478 (27%), Positives = 188/478 (40%), Gaps = 70/478 (14%) Query 6 RLTALDEMFITDDIDIVP-SVQIEARVSGRFDLDRLAAALRAAVAKHALARARLGRASLT 64 R + L+++ + D P SV + AR D L A+ + +H +ARAR+ R L+ Sbjct 83 RFSVLEDLIVASDRRTAPISVGMIARTREIIDSFILRDAVIDVLLRHPMARARM-RTGLS 141 Query 65 ARTLYW-EVPDRADHLAVEITDEPVGEVRSRFYARAPELHRSPVFAVAVVRETVGDRLLL 123 R ++ PD +A D+ V E + + +L S V VR GD + + Sbjct 142 GRRWWFPHSPDDVLTVAKGDGDDDVWEKFAEICSHPFDLTASCPLRVLHVRLPAGDAVAV 201 Query 124 NFHHAAFDGMGGLRLLLSLA--------RAYAGEPDE---VGGPPIEEARNLKGVAGSRD 172 HHAA DGM LL ++ RA AG P E + A L G A Sbjct 202 AAHHAALDGMSVAMLLRAILQRCPSTAFRALAGVPTEPAWLAEATGARASELSGQAVP-G 260 Query 173 LFDVLIRAR----------GLAKPAIDRKRTTRVAPDGGSPDGPRF-------------- 208 L V +R GL P + +RVAP GS G R Sbjct 261 LHAVPVRPAQVRAVRRLVLGLPVPRLP----SRVAPSPGSRPGSRTRSARAHPGRATDDR 316 Query 209 ------VFAPLTIESDEMATAVARRPEGATVNDLAMAALALTILQWNRTHDVPAADSVSV 262 V+ + T+VA P ATVNDL +AA + + +WN P +V V Sbjct 317 HSSAYGVYCETVPVPRSVRTSVAGAP--ATVNDLLLAAAKVAVQRWNTAAGQPTM-TVRV 373 Query 263 NMPVNFRPTAWSTEVISNFASYLAIVLRVDEVTDLEKATAIVAGIT--------GPLKQS 314 MP++ R T+ I N + IV + D A A V T + Sbjct 374 RMPISQR-APGGTDAIGNHTGEVLIVTTPRDRQDPATALAAVRRQTAAGKAVGKAAGRTV 432 Query 315 GAAGWVVDLLEGGKVLPAMLKRQLQLLLPLVEDR--FVESVCLSNLGRVDVPAFGGEAG- 371 GA + G LP + L L L ++ R + ++ ++NLGR+ P+ G +G Sbjct 433 GARPVTGGRIGGVAWLPGPARHAL-LRLAVITARPLLMPTITVTNLGRLADPSASGTSGP 491 Query 372 DTTEVWFSPTAAMSVMPIG--VGLVGFGGTLRAMFRGDGRTIGGEALGRFAALYRDTL 427 D + F AA + +P G + G+ L F A+ RFA +YR L Sbjct 492 DVASLHF---AAFAGLPQGLVIAAAGYRRDLGLTFCYHRDLFDRAAVRRFARVYRTAL 546 >gi|126178848|ref|YP_001046813.1| condensation domain-containing protein [Methanoculleus marisnigri JR1] gi|125861642|gb|ABN56831.1| condensation domain protein [Methanoculleus marisnigri JR1] Length=435 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 92/390 (24%), Positives = 151/390 (39%), Gaps = 35/390 (8%) Query 23 PSVQIEARVSGRFDLDRLAAALRAAVAKHALARARLGRASLTARTLYWEVPD-RADHLAV 81 P++ + + G D + AA VA R+R A + + ++ E+P+ R D V Sbjct 27 PTMHVVFTLDGEVDAGAMRAATMRLVASDPYLRSRF--AEVDGQPVWEEIPEERWDGAFV 84 Query 82 EITDEPVGEVRSRFYARAP-ELHRSPVFAVAVVRETVGDRLLLNFHHAAFDGMGGLRLLL 140 + P G AP ++ P V + R GD + + HH D G L L Sbjct 85 LV---PAGGDEPLHAPPAPLDVRSGPQVRVNLYRREEGDTVAVTCHHGFCDATGALTLAR 141 Query 141 SLARAYAGEPDEVGGPPIEEARNLKGVAGSRDLFDVLIRARGLA--KPAIDRKRTTRVAP 198 L AY G D+ P A + L+ R + LA +P IDR R Sbjct 142 DLFAAYRGIADDPDFRPAPRAPYERSTDRVLALYSDEERRQALAEEEPFIDRWRFPSEQT 201 Query 199 DGGSPDGPRFVFAPLTIESDEMATAVARRPEGATVNDLAMAALALTILQWNRTH---DVP 255 G+ PR L+ E A + GATVND+ + A L + H + P Sbjct 202 GRGT---PRVASRTLSPERLGRIKAFGKE-HGATVNDVLIGAFFLAFQKIRGEHADREEP 257 Query 256 AADSVSVNMPVNFRPTAWSTEVISNFASYLAIVLRVDEVTDLEKATAIVAGITGPLKQSG 315 + S ++ + P + ++N + + L E LE V IT ++ G Sbjct 258 RSLLTSADLRRRY-PGLYEDAPLTNLSIAYEVTLSSGEGGRLEDIIGRVTAITA-RRKVG 315 Query 316 AAG-----WVVDLLEGGKVLPAMLKRQLQLLLPLVEDRFVESVCLSNLGRVD------VP 364 + G + +++ GG +PA ++ ++ ++ SNLG D +P Sbjct 316 SPGIAAILFYEEIMAGG--MPA-VRTFFDGMIERYRTSGNKNPVFSNLGVFDPGDYLPIP 372 Query 365 AFGGEAGDTTEVWFSPTAAMSVMPIGVGLV 394 GG A D ++ + P + P G L+ Sbjct 373 GKGGAALDIQDIQYHPC---TCWPYGFLLI 399 Lambda K H 0.321 0.137 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 877435408584 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40