BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2308
Length=238
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609445|ref|NP_216824.1| hypothetical protein Rv2308 [Mycoba... 479 1e-133
gi|289745583|ref|ZP_06504961.1| conserved hypothetical protein [... 478 3e-133
gi|31793490|ref|NP_855983.1| hypothetical protein Mb2334 [Mycoba... 476 1e-132
gi|15841804|ref|NP_336841.1| hypothetical protein MT2366 [Mycoba... 476 1e-132
gi|254820931|ref|ZP_05225932.1| hypothetical protein MintA_13435... 319 3e-85
gi|289570431|ref|ZP_06450658.1| conserved hypothetical protein [... 225 4e-57
gi|336116400|ref|YP_004571166.1| hypothetical protein MLP_07490 ... 99.8 3e-19
gi|86739803|ref|YP_480203.1| hypothetical protein Francci3_1093 ... 95.1 8e-18
gi|336177947|ref|YP_004583322.1| hypothetical protein FsymDg_197... 84.3 1e-14
gi|209524006|ref|ZP_03272558.1| protein of unknown function DUF4... 70.5 2e-10
gi|284050111|ref|ZP_06380321.1| hypothetical protein AplaP_01420... 68.2 1e-09
gi|159029753|emb|CAO87831.1| unnamed protein product [Microcysti... 65.1 8e-09
gi|254422312|ref|ZP_05036030.1| conserved hypothetical protein [... 62.8 4e-08
gi|75909456|ref|YP_323752.1| hypothetical protein Ava_3249 [Anab... 60.8 2e-07
gi|269955271|ref|YP_003325060.1| hypothetical protein Xcel_0463 ... 59.3 4e-07
gi|31793198|ref|NP_855691.1| hypothetical protein Mb2041 [Mycoba... 54.7 1e-05
gi|340627030|ref|YP_004745482.1| hypothetical protein MCAN_20411... 52.8 4e-05
gi|15609155|ref|NP_216534.1| hypothetical protein Rv2018 [Mycoba... 52.0 8e-05
gi|253798929|ref|YP_003031930.1| hypothetical protein TBMG_01967... 51.6 9e-05
gi|15841501|ref|NP_336538.1| hypothetical protein MT2074 [Mycoba... 51.2 1e-04
gi|330954325|gb|EGH54585.1| hypothetical protein PSYCIT7_23745 [... 50.8 2e-04
gi|17232672|ref|NP_489220.1| hypothetical protein alr5180 [Nosto... 50.4 2e-04
gi|300783741|ref|YP_003764032.1| hypothetical protein AMED_1819 ... 47.4 0.002
gi|257060984|ref|YP_003138872.1| hypothetical protein Cyan8802_3... 47.4 0.002
gi|86143518|ref|ZP_01061903.1| hypothetical protein MED217_13004... 44.7 0.011
gi|271970293|ref|YP_003344489.1| hypothetical protein Sros_9124 ... 44.7 0.011
gi|257484006|ref|ZP_05638047.1| hypothetical protein PsyrptA_121... 42.7 0.044
gi|320330221|gb|EFW86206.1| hypothetical protein PsgRace4_09447 ... 42.7 0.049
gi|320326056|gb|EFW82113.1| hypothetical protein PsgB076_03444 [... 42.4 0.054
gi|86739668|ref|YP_480068.1| hypothetical protein Francci3_0955 ... 42.0 0.076
gi|291571960|dbj|BAI94232.1| hypothetical protein [Arthrospira p... 42.0 0.079
gi|28868150|ref|NP_790769.1| hypothetical protein PSPTO_0930 [Ps... 41.6 0.090
gi|343460604|gb|AEM39040.1| protein of unknown function DUF433 [... 41.2 0.12
gi|338997580|ref|ZP_08636275.1| hypothetical protein GME_06235 [... 40.8 0.15
gi|332710244|ref|ZP_08430195.1| hypothetical protein LYNGBM3L_49... 40.4 0.23
gi|296448575|ref|ZP_06890448.1| conserved hypothetical protein [... 40.0 0.30
gi|340525132|gb|AEK40337.1| hypothetical protein RAM_09235 [Amyc... 39.3 0.45
gi|119716257|ref|YP_923222.1| hypothetical protein Noca_2025 [No... 39.3 0.51
gi|115345560|ref|YP_771742.1| hypothetical protein RD1_A0033 [Ro... 38.9 0.60
gi|298242599|ref|ZP_06966406.1| protein of unknown function DUF4... 38.9 0.72
gi|295838072|ref|ZP_06825005.1| toxin-antitoxin system, antitoxi... 38.5 0.83
gi|83748655|ref|ZP_00945673.1| Hypothetical Protein RRSL_02032 [... 38.5 0.86
gi|300867555|ref|ZP_07112205.1| conserved hypothetical protein [... 38.1 0.97
gi|269976999|ref|ZP_06183973.1| putative toxin-antitoxin system,... 38.1 1.2
gi|305662923|ref|YP_003859211.1| hypothetical protein Igag_0493 ... 37.7 1.6
gi|307701672|ref|ZP_07638688.1| putative toxin-antitoxin system,... 37.4 1.6
gi|306819377|ref|ZP_07453085.1| conserved hypothetical protein [... 37.4 2.1
gi|227876101|ref|ZP_03994220.1| conserved hypothetical protein [... 37.0 2.2
gi|14600475|ref|NP_146990.1| electron transfer flavoprotein alph... 37.0 2.3
gi|260810386|ref|XP_002599945.1| hypothetical protein BRAFLDRAFT... 37.0 2.6
>gi|15609445|ref|NP_216824.1| hypothetical protein Rv2308 [Mycobacterium tuberculosis H37Rv]
gi|148662133|ref|YP_001283656.1| hypothetical protein MRA_2327 [Mycobacterium tuberculosis H37Ra]
gi|148823509|ref|YP_001288263.1| hypothetical protein TBFG_12332 [Mycobacterium tuberculosis F11]
59 more sequence titles
Length=238
Score = 479 bits (1233), Expect = 1e-133, Method: Compositional matrix adjust.
Identities = 238/238 (100%), Positives = 238/238 (100%), Gaps = 0/238 (0%)
Query 1 MRADMSVTSMLDREVYVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPILRVTPGATPWV 60
MRADMSVTSMLDREVYVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPILRVTPGATPWV
Sbjct 1 MRADMSVTSMLDREVYVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPILRVTPGATPWV 60
Query 61 TWGEFVETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGG 120
TWGEFVETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGG
Sbjct 61 TWGEFVETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGG 120
Query 121 EEIGLPDAEVTIRTGQALLGDARWLASIATPGRDEVGEAVIVELPVDKAFPEIVINPSRY 180
EEIGLPDAEVTIRTGQALLGDARWLASIATPGRDEVGEAVIVELPVDKAFPEIVINPSRY
Sbjct 121 EEIGLPDAEVTIRTGQALLGDARWLASIATPGRDEVGEAVIVELPVDKAFPEIVINPSRY 180
Query 181 SGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAIDYTKKYRLARLVAA 238
SGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAIDYTKKYRLARLVAA
Sbjct 181 SGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAIDYTKKYRLARLVAA 238
>gi|289745583|ref|ZP_06504961.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289758432|ref|ZP_06517810.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|294994597|ref|ZP_06800288.1| hypothetical protein Mtub2_08785 [Mycobacterium tuberculosis
210]
gi|289686111|gb|EFD53599.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289713996|gb|EFD78008.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|326903922|gb|EGE50855.1| hypothetical protein TBPG_01809 [Mycobacterium tuberculosis W-148]
gi|339295212|gb|AEJ47323.1| hypothetical protein CCDC5079_2133 [Mycobacterium tuberculosis
CCDC5079]
gi|339298832|gb|AEJ50942.1| hypothetical protein CCDC5180_2105 [Mycobacterium tuberculosis
CCDC5180]
Length=238
Score = 478 bits (1231), Expect = 3e-133, Method: Compositional matrix adjust.
Identities = 237/238 (99%), Positives = 238/238 (100%), Gaps = 0/238 (0%)
Query 1 MRADMSVTSMLDREVYVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPILRVTPGATPWV 60
MRADMSVTSMLDREVYVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPILRVTPGATPWV
Sbjct 1 MRADMSVTSMLDREVYVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPILRVTPGATPWV 60
Query 61 TWGEFVETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGG 120
TWGEFVETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGG
Sbjct 61 TWGEFVETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGG 120
Query 121 EEIGLPDAEVTIRTGQALLGDARWLASIATPGRDEVGEAVIVELPVDKAFPEIVINPSRY 180
EEIGLPDAEVTIRTGQALLGDARWLASIATPGRDEVGEAVIVELPVDKAFPEIVINPSRY
Sbjct 121 EEIGLPDAEVTIRTGQALLGDARWLASIATPGRDEVGEAVIVELPVDKAFPEIVINPSRY 180
Query 181 SGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAIDYTKKYRLARLVAA 238
SGQPTFVGRRVSPVTIAQMVDGGEEREDLAA+YGLSLKQIQDAIDYTKKYRLARLVAA
Sbjct 181 SGQPTFVGRRVSPVTIAQMVDGGEEREDLAANYGLSLKQIQDAIDYTKKYRLARLVAA 238
>gi|31793490|ref|NP_855983.1| hypothetical protein Mb2334 [Mycobacterium bovis AF2122/97]
gi|121638193|ref|YP_978417.1| hypothetical protein BCG_2328 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224990687|ref|YP_002645374.1| hypothetical protein JTY_2322 [Mycobacterium bovis BCG str. Tokyo
172]
gi|31619083|emb|CAD97195.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
gi|121493841|emb|CAL72316.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224773800|dbj|BAH26606.1| hypothetical protein JTY_2322 [Mycobacterium bovis BCG str. Tokyo
172]
gi|341602231|emb|CCC64905.1| conserved hypothetical protein [Mycobacterium bovis BCG str.
Moreau RDJ]
Length=238
Score = 476 bits (1225), Expect = 1e-132, Method: Compositional matrix adjust.
Identities = 237/238 (99%), Positives = 237/238 (99%), Gaps = 0/238 (0%)
Query 1 MRADMSVTSMLDREVYVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPILRVTPGATPWV 60
MRADMSVTSMLDREVYVYAEVDKLIGLPAGTAKRWINGYERG KDHPPILRVTPGATPWV
Sbjct 1 MRADMSVTSMLDREVYVYAEVDKLIGLPAGTAKRWINGYERGVKDHPPILRVTPGATPWV 60
Query 61 TWGEFVETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGG 120
TWGEFVETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGG
Sbjct 61 TWGEFVETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGG 120
Query 121 EEIGLPDAEVTIRTGQALLGDARWLASIATPGRDEVGEAVIVELPVDKAFPEIVINPSRY 180
EEIGLPDAEVTIRTGQALLGDARWLASIATPGRDEVGEAVIVELPVDKAFPEIVINPSRY
Sbjct 121 EEIGLPDAEVTIRTGQALLGDARWLASIATPGRDEVGEAVIVELPVDKAFPEIVINPSRY 180
Query 181 SGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAIDYTKKYRLARLVAA 238
SGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAIDYTKKYRLARLVAA
Sbjct 181 SGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAIDYTKKYRLARLVAA 238
>gi|15841804|ref|NP_336841.1| hypothetical protein MT2366 [Mycobacterium tuberculosis CDC1551]
gi|254232451|ref|ZP_04925778.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|13882066|gb|AAK46655.1| hypothetical protein MT2366 [Mycobacterium tuberculosis CDC1551]
gi|124601510|gb|EAY60520.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|323719212|gb|EGB28357.1| hypothetical protein TMMG_01592 [Mycobacterium tuberculosis CDC1551A]
Length=238
Score = 476 bits (1225), Expect = 1e-132, Method: Compositional matrix adjust.
Identities = 237/238 (99%), Positives = 237/238 (99%), Gaps = 0/238 (0%)
Query 1 MRADMSVTSMLDREVYVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPILRVTPGATPWV 60
MRADMSVTSMLDREVYVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPILRVTPGATPWV
Sbjct 1 MRADMSVTSMLDREVYVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPILRVTPGATPWV 60
Query 61 TWGEFVETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGG 120
TWGEFVETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGG
Sbjct 61 TWGEFVETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGG 120
Query 121 EEIGLPDAEVTIRTGQALLGDARWLASIATPGRDEVGEAVIVELPVDKAFPEIVINPSRY 180
EEIGLPDAEVTIRTGQALLGDARWLASIATPGRDEVGEAVIVELPVDKAFPEIVINPS Y
Sbjct 121 EEIGLPDAEVTIRTGQALLGDARWLASIATPGRDEVGEAVIVELPVDKAFPEIVINPSPY 180
Query 181 SGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAIDYTKKYRLARLVAA 238
SGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAIDYTKKYRLARLVAA
Sbjct 181 SGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAIDYTKKYRLARLVAA 238
>gi|254820931|ref|ZP_05225932.1| hypothetical protein MintA_13435 [Mycobacterium intracellulare
ATCC 13950]
Length=231
Score = 319 bits (817), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 162/234 (70%), Positives = 188/234 (81%), Gaps = 6/234 (2%)
Query 1 MRADMSVTSMLDREVYVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPILRVTPGATPWV 60
M A M+VTSMLDREVYVYAEVD+LIGL GTA+RWINGYER GKD+PPILRVTP TPWV
Sbjct 1 MLAAMTVTSMLDREVYVYAEVDRLIGLRGGTARRWINGYERSGKDYPPILRVTPRDTPWV 60
Query 61 TWGEFVETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTM-G 119
TWGEFVETRML E+RD +KVPI R RAAI+ELR + +YPLAH+RP+LS+H+RDLT+
Sbjct 61 TWGEFVETRMLHEFRDFKKVPIPRLRAAIDELRRVYGTQYPLAHMRPYLSSHDRDLTIRD 120
Query 120 GEEIGLPDAEVTIRTGQALLGDARWLASIATPGRDEVGEAVIVELPVDKAFPEIVINPSR 179
G E+ E IRTGQ L+GD RWLA +T DE GEA+IVE+P D+ FP+IVINP R
Sbjct 121 GSEL-----ETVIRTGQQLIGDGRWLAERSTLENDEDGEAIIVEIPADRDFPDIVINPVR 175
Query 180 YSGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAIDYTKKYRLA 233
YSGQPTFVGRRVSPVTIA M + GE E LAA+YGLSLKQ+ AI YT++Y LA
Sbjct 176 YSGQPTFVGRRVSPVTIAGMANSGEPHEVLAAEYGLSLKQVDQAIAYTERYGLA 229
>gi|289570431|ref|ZP_06450658.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289544185|gb|EFD47833.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length=109
Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 109/109 (100%), Positives = 109/109 (100%), Gaps = 0/109 (0%)
Query 1 MRADMSVTSMLDREVYVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPILRVTPGATPWV 60
MRADMSVTSMLDREVYVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPILRVTPGATPWV
Sbjct 1 MRADMSVTSMLDREVYVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPILRVTPGATPWV 60
Query 61 TWGEFVETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFL 109
TWGEFVETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFL
Sbjct 61 TWGEFVETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFL 109
>gi|336116400|ref|YP_004571166.1| hypothetical protein MLP_07490 [Microlunatus phosphovorus NM-1]
gi|334684178|dbj|BAK33763.1| hypothetical protein MLP_07490 [Microlunatus phosphovorus NM-1]
Length=225
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/233 (31%), Positives = 115/233 (50%), Gaps = 26/233 (11%)
Query 5 MSVTSMLDREVYVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPILRVTPGATPWVTWGE 64
M+ ++L+RE+Y + +L+ L T W+ G R K + P++R + VTW E
Sbjct 1 MAAPTVLEREMYTEHQAARLLRLAPSTLHYWLEGGTRRNKTYKPVIRAEATGSNRVTWAE 60
Query 65 FVETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGGEE-- 122
F+E +L +YR +VP++ R IE LR R + YPLA RP+++ ER L + ++
Sbjct 61 FIEAGLLRQYRQDLQVPMLELRNFIERLRDRLGVPYPLADQRPWVA--ERKLVVEAQDEA 118
Query 123 -IGLPDAEVTIRTGQALLGDA--------RWLASIATPGRDEVGEAVIVELPVDKAFPEI 173
+G A V +GQ +L A W IA R P D++ +
Sbjct 119 RLGADFALVAPVSGQYMLLPAAQAFYDRVTWADDIAQRWR-----------PDDRSDSPV 167
Query 174 VINPSRYSGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAIDY 226
I+P G P+ G +S + + + GE+ +DLA +GLSL Q++ A+ Y
Sbjct 168 TIDPDIRFGSPSVGG--ISTAILFEQSESGEDEKDLAETFGLSLAQVRWALSY 218
>gi|86739803|ref|YP_480203.1| hypothetical protein Francci3_1093 [Frankia sp. CcI3]
gi|86566665|gb|ABD10474.1| conserved hypothetical protein [Frankia sp. CcI3]
Length=228
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/228 (33%), Positives = 112/228 (50%), Gaps = 13/228 (5%)
Query 10 MLDREVYVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPILRVTPGATPWVTWGEFVETR 69
ML+RE+Y +E L+ + + WI+GY RG + P++R VTWGEFVE
Sbjct 1 MLEREIYSMSEAAHLLAVKPARLRSWIDGYTRGQTHYEPVIRPEHTGRDLVTWGEFVEAG 60
Query 70 MLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMG-GEEIGLPDA 128
L EYR R V + R R ++ LR RF + YPLAH+ P++ RD+ M EE+GL +
Sbjct 61 YLHEYR-VRGVSLQRMRLVVQRLRERFGVPYPLAHMHPYVFG--RDVVMAVQEEVGLATS 117
Query 129 --EVTIRTGQALLGDAR--WLASIA-TPGRDEVGEAVIVELPVDKAFPEIVINPSRYSGQ 183
V + GQ +L + A + PG + GEA + L D ++V++P G
Sbjct 118 LEMVRVHDGQLVLAPKAQDFFAKVEFAPGDGKGGEA--LRLYPDPTGRQVVLDPLLGFGA 175
Query 184 PTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAIDYTKKYR 231
P V R + ++ G+ +A Y L ++ A+ Y + R
Sbjct 176 P--VVRNTRTANLYELWAAGDSIAGIAEVYELPDADVEAAVRYEARLR 221
>gi|336177947|ref|YP_004583322.1| hypothetical protein FsymDg_1972 [Frankia symbiont of Datisca
glomerata]
gi|334858927|gb|AEH09401.1| hypothetical protein FsymDg_1972 [Frankia symbiont of Datisca
glomerata]
Length=89
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/86 (48%), Positives = 59/86 (69%), Gaps = 1/86 (1%)
Query 5 MSVTSMLDREVYVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPILRVTPGATPWVTWGE 64
M V +L+R +Y ++ D+++ LPAGT +RW++GY RG + P++R T VTWGE
Sbjct 1 MDVIDLLERPLYGMSQADRILLLPAGTTRRWVDGYRRGDTAYSPVIRPTSTGDETVTWGE 60
Query 65 FVETRMLAEYRDRRKVPIVRQRAAIE 90
FVETR+LA +R R VP++R R AIE
Sbjct 61 FVETRLLAGFRA-RGVPMIRLRPAIE 85
>gi|209524006|ref|ZP_03272558.1| protein of unknown function DUF433 [Arthrospira maxima CS-328]
gi|209495678|gb|EDZ95981.1| protein of unknown function DUF433 [Arthrospira maxima CS-328]
Length=240
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/238 (26%), Positives = 104/238 (44%), Gaps = 36/238 (15%)
Query 15 VYVYAEVDKLIGLPAGTAKRWING----YERGGKDHPPILRVTPGATPWVTWGEFVETRM 70
+Y A+ + + +P T K W+NG ++G +D P+++ P +++ VE +
Sbjct 18 IYTIADTARYLHIPLPTLKTWVNGRSYPTQKGDQDFLPLIQRPQPNIPQLSFTNLVEAHV 77
Query 71 LAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGGEEIGLPDAEV 130
L R VP+ + R A++ + +F +PL ++ + G +I + E
Sbjct 78 LRVIRTVHNVPLRQVRLALDYISEQFKTEHPLV---------QKQFSTDGVDIFIEQFER 128
Query 131 TI---RTGQALLGDARWLASIATPGRDEVGEAVIVELPVDKAFPEI------------VI 175
I R+GQ L + L ++ T R E E I + FP I +I
Sbjct 129 LINASRSGQ--LAMKQVLNNLLT--RIEWDEQDIAS----RLFPIINDHSHNFRDKVLII 180
Query 176 NPSRYSGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAIDYTKKYRLA 233
+P+ G+PT G + + Q+ D G+ ED+A DY QIQ AI + + A
Sbjct 181 DPNISFGKPTITGTGIPTKIVTQLFDAGDSIEDIADDYNCQPWQIQQAILFESNSQAA 238
>gi|284050111|ref|ZP_06380321.1| hypothetical protein AplaP_01420 [Arthrospira platensis str.
Paraca]
Length=240
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/238 (26%), Positives = 104/238 (44%), Gaps = 36/238 (15%)
Query 15 VYVYAEVDKLIGLPAGTAKRWING----YERGGKDHPPILRVTPGATPWVTWGEFVETRM 70
+Y A+ + + +P T K W+NG ++G +D P+++ +++ VE +
Sbjct 18 IYTIADTARYLHIPLPTLKTWVNGRSYPTQKGDQDFLPLIQRPQPNIRQLSFTNLVEAHV 77
Query 71 LAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGGEEIGLPDAEV 130
L R VP+ + R A++ + +F +PL ++ L+ G +I + E
Sbjct 78 LRVIRTVHNVPLRQVRLALDYISEQFKTEHPLV---------QKQLSTDGVDIFIEQFER 128
Query 131 TI---RTGQALLGDARWLASIATPGRDEVGEAVIVELPVDKAFPEI------------VI 175
I R+GQ L + L ++ T R E E I + FP I +I
Sbjct 129 LINASRSGQ--LAMKQVLNNLLT--RIEWDEQDIAS----RLFPMINDHSHNFRDKVLII 180
Query 176 NPSRYSGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAIDYTKKYRLA 233
+P+ G+PT G + + Q+ D G+ ED+A DY QIQ AI + + A
Sbjct 181 DPNISFGKPTITGTGIPTKIVTQLFDAGDSIEDIADDYNCQPWQIQQAILFESNSQAA 238
>gi|159029753|emb|CAO87831.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length=238
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/248 (23%), Positives = 106/248 (43%), Gaps = 36/248 (14%)
Query 5 MSVTSMLDREVYVYAEVDKLIGLPAGTAKRWING----YERGGKDHPPILRVTPGATPWV 60
+S+ + Y A+ + + +P T + W+ G ++G K+ P+++ P +
Sbjct 8 LSLEHLYHVPTYTIADTARYLHIPLPTLRTWVRGRTYPTKKGQKEFLPLIQRPNPNIPQL 67
Query 61 TWGEFVETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGG 120
++ VE +L R +P+ + R A++ + +FN +PL ++ + G
Sbjct 68 SFTNLVEAHVLRVIRKVHNIPLDKVRLALDYISEQFNTDHPLV---------QKQFSTDG 118
Query 121 EEIGLPDAEVTI---RTGQALLGDARWLASIATPGRDEVGEAVIVELPVDKAFPEIVINP 177
++ + E I R+GQ L ++L ++ T R E E I + FP I IN
Sbjct 119 TDLFIEQFEHLINASRSGQ--LTMKQFLNNLLT--RIEWDEQYIAT----RLFPTIDING 170
Query 178 SRYS------------GQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAID 225
+S G P G + + ++ D G+ ED+A DY QI+ AI
Sbjct 171 EDFSNKVLKIDPNISFGNPVITGTGIPTKVVTELYDAGDSIEDIANDYNCQPWQIEKAIL 230
Query 226 YTKKYRLA 233
+ ++ A
Sbjct 231 FECNWQAA 238
>gi|254422312|ref|ZP_05036030.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
gi|196189801|gb|EDX84765.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
Length=235
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/223 (27%), Positives = 98/223 (44%), Gaps = 23/223 (10%)
Query 16 YVYAEVDKLIGLPAGTAKRWING----YERGGKDHPPILRVTPGATPWVTWGEFVETRML 71
Y A+ + + +PAGT + W++G G K P++ + G +P +++ VE +L
Sbjct 16 YPVADAARYLAIPAGTLRSWLHGRTYPTANGNKYFEPLIHLPDGNSPQLSFTNLVEAHVL 75
Query 72 AEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMG--GEEIGLP-DA 128
R KV + + R A++ + +F L +PLA R T DL + G+ I D
Sbjct 76 RVIRQNHKVRLDKVRTALDYVEQKFGLPHPLA--RAQFQTDGVDLFVESVGQLINASRDG 133
Query 129 EVTI-RTGQALLGDARWLASIATPGRDEVGEAV----IVELPVDKAFPEIVINPSRYSGQ 183
++ + +T Q L W DE G +++L + INP G+
Sbjct 134 QLAMKKTLQQFLQRIEW---------DEEGHPQRLFPLIQLQQADEPRVLEINPRLSFGR 184
Query 184 PTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAIDY 226
P V + I GE E LA DY LS +Q+++ + +
Sbjct 185 PVVVNTGIPANMIIDRFRAGESLESLADDYDLSRQQLEEILRF 227
>gi|75909456|ref|YP_323752.1| hypothetical protein Ava_3249 [Anabaena variabilis ATCC 29413]
gi|75703181|gb|ABA22857.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413]
Length=239
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/224 (25%), Positives = 104/224 (47%), Gaps = 25/224 (11%)
Query 16 YVYAEVDKLIGLPAGTAKRWING----YERGGKDHPPILRVTPGATPWVTWGEFVETRML 71
Y +E + + +P GT + W++G G + P++ + P +++ VE +L
Sbjct 16 YSISESARYLLIPVGTLRSWLHGRFYPTGEGKRFFKPLIELPSPEIPQLSFTNLVEAHVL 75
Query 72 AEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGGEEIG-LPDAEV 130
R ++ + R R A++ + +F + +PLA + T DL + + +G L +A +
Sbjct 76 RVIRKNHQIRLDRVRTALDYIDHQFQVPHPLARIE--FQTDGVDLFV--DSVGKLINASM 131
Query 131 TIRTG--QALLGDARWLASIATPGRDEVGEAV-------IVELPVDKAFPE-IVINPSRY 180
++ +AL R + DE G A+ + E +K P+ +VI+P
Sbjct 132 AVQLAMREALKNLLRRIE------LDETGSAIKLFPLTRLTENLTEKESPKTLVIDPRIS 185
Query 181 SGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAI 224
G+P +G + +A+ GE +DLA DYG Q+++AI
Sbjct 186 FGRPVLIGTGIPTAILAERYKAGESIDDLADDYGCDRLQVEEAI 229
>gi|269955271|ref|YP_003325060.1| hypothetical protein Xcel_0463 [Xylanimonas cellulosilytica DSM
15894]
gi|269303952|gb|ACZ29502.1| hypothetical protein Xcel_0463 [Xylanimonas cellulosilytica DSM
15894]
Length=224
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/222 (28%), Positives = 94/222 (43%), Gaps = 31/222 (13%)
Query 15 VYVYAEVDKLIGLPAGTAKRWINGYERGGKD------HPPILRVTPGATPWVTWGEFVET 68
+Y AE +++G P+ T + W +G G D I G P + + E
Sbjct 13 LYSVAEAARIVGTPSSTLRNWAHGSVYKGLDGNQHVAEALITTTGAGRGPVIPFVGLGEA 72
Query 69 RMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGGEEIGLPDA 128
+ A +R VP+ R R A+ L F L LA ER LT G E +
Sbjct 73 YVRAAFRAA-GVPMQRIRPALARLEKEFGLHQALAR--------ERLLTDGAEVLYRYSV 123
Query 129 E--------VTIRTGQALLGDA--RWLASIATPGRDEVGEAVIVELPVDKAFPEIVINPS 178
E V +R GQ + + ++L +I RD G +ELP + P +V+NP+
Sbjct 124 EDTPELGELVVVRNGQGVFNEVVEQYLKTITY--RD--GLVAAIELP--QFAPRVVVNPT 177
Query 179 RYSGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQI 220
+ GQPT V I + GE ++ ADYG+S+ +
Sbjct 178 QNFGQPTHSATGVPIHAIQGRLAAGEPAGEVGADYGISVADV 219
>gi|31793198|ref|NP_855691.1| hypothetical protein Mb2041 [Mycobacterium bovis AF2122/97]
gi|121637902|ref|YP_978125.1| hypothetical protein BCG_2035 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224990396|ref|YP_002645083.1| hypothetical protein JTY_2030 [Mycobacterium bovis BCG str. Tokyo
172]
gi|31618790|emb|CAD96894.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
gi|121493549|emb|CAL72023.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224773509|dbj|BAH26315.1| hypothetical protein JTY_2030 [Mycobacterium bovis BCG str. Tokyo
172]
gi|341601939|emb|CCC64613.1| conserved hypothetical protein [Mycobacterium bovis BCG str.
Moreau RDJ]
Length=239
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/250 (25%), Positives = 105/250 (42%), Gaps = 40/250 (16%)
Query 1 MRADMSVTSMLDREVYVYAEVDKLIGLPAGTAKRWINGYERGGKDHP-----PILRVTP- 54
M D + D +Y AE + + +P T W +GYER + P PI+ P
Sbjct 1 MAGDQELELRFDVPLYTLAEASRYLVVPRATLATWADGYERRPANAPAVQGQPIITALPH 60
Query 55 --GATPWVTWGEFVETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTH 112
G+ + + E +L +R RA + R R +L + + ++ P +
Sbjct 61 PTGSHARLPFVGIAEAYVLNAFR----------RAGVPMQRIRPSLDWLIKNVGPH-ALA 109
Query 113 ERDLTMGGEEI----------GLPD-----AEVTIRTGQALLGD--ARWLASIATPGRDE 155
+DL GG E+ G PD + R+GQ + + +L I+ D
Sbjct 110 SQDLCTGGAEVLWRFAERSGEGSPDDLVVRGLIVPRSGQYVFKEIVEHYLQQISF-ADDN 168
Query 156 VGEAVIVELPVDKAFPEIVINPSRYSGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGL 215
+ A ++ LP +V++P R GQP F G V + + G + +A DYG+
Sbjct 169 L--ASMIRLP-QYGDANVVLDPRRGYGQPVFDGSGVRVADVLGPLRAGATFQAVADDYGV 225
Query 216 SLKQIQDAID 225
+ Q++DA+D
Sbjct 226 TPDQLRDALD 235
>gi|340627030|ref|YP_004745482.1| hypothetical protein MCAN_20411 [Mycobacterium canettii CIPT
140010059]
gi|340005220|emb|CCC44373.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=239
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/250 (25%), Positives = 106/250 (43%), Gaps = 40/250 (16%)
Query 1 MRADMSVTSMLDREVYVYAEVDKLIGLPAGTAKRWINGYERGGKDHP-----PILRVTP- 54
M D + D +Y AE + + +P T W +GYER + P PI+ P
Sbjct 1 MAGDQELKLRFDVPLYTLAEASRYLVVPRATLANWADGYERRPANAPAVQGQPIITALPH 60
Query 55 --GATPWVTWGEFVETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTH 112
G+ + + E +L +R R VP+ R R +++ L + ++ P +
Sbjct 61 PTGSHARLPFVGIAEAYVLNAFR-RAGVPMQRIRPSLDWL---------IKNVGPH-ALA 109
Query 113 ERDLTMGGEEI----------GLPD-----AEVTIRTGQALLGD--ARWLASIATPGRDE 155
+DL G E+ G PD + R+GQ + + +L I+ D
Sbjct 110 SQDLCTDGAEVLWRFAERSGEGSPDDLVVRGLIVPRSGQYVFKEIVEHYLQQISF-ADDN 168
Query 156 VGEAVIVELPVDKAFPEIVINPSRYSGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGL 215
+ A ++ LP +V++P R GQP F G V + + G + +A DYG+
Sbjct 169 L--ASMIRLP-QYGDANVVLDPRRGYGQPVFDGSGVRVADVLGPLRAGATFQAVADDYGV 225
Query 216 SLKQIQDAID 225
+ Q++DA+D
Sbjct 226 TPDQLRDALD 235
>gi|15609155|ref|NP_216534.1| hypothetical protein Rv2018 [Mycobacterium tuberculosis H37Rv]
gi|148661832|ref|YP_001283355.1| hypothetical protein MRA_2034 [Mycobacterium tuberculosis H37Ra]
gi|148823234|ref|YP_001287988.1| hypothetical protein TBFG_12053 [Mycobacterium tuberculosis F11]
32 more sequence titles
Length=239
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/250 (25%), Positives = 104/250 (42%), Gaps = 40/250 (16%)
Query 1 MRADMSVTSMLDREVYVYAEVDKLIGLPAGTAKRWINGYERGGKDHP-----PILRVTP- 54
M D + D +Y AE + + +P T W +GYER + P PI+ P
Sbjct 1 MAGDQELELRFDVPLYTLAEASRYLVVPRATLATWADGYERRPANAPAVQGQPIITALPH 60
Query 55 --GATPWVTWGEFVETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTH 112
G+ + + E +L +R RA + R R +L + + ++ P +
Sbjct 61 PTGSHARLPFVGIAEAYVLNAFR----------RAGVPMQRIRPSLDWLIKNVGPH-ALA 109
Query 113 ERDLTMGGEEI----------GLPD-----AEVTIRTGQALLGD--ARWLASIATPGRDE 155
+DL G E+ G PD + R+GQ + + +L I+ D
Sbjct 110 SQDLCTDGAEVLWRFAERSGEGSPDDLVVRGLIVPRSGQYVFKEIVEHYLQQISF-ADDN 168
Query 156 VGEAVIVELPVDKAFPEIVINPSRYSGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGL 215
+ A ++ LP +V++P R GQP F G V + + G + +A DYG+
Sbjct 169 L--ASMIRLP-QYGDANVVLDPRRGYGQPVFDGSGVRVADVLGPLRAGATFQAVADDYGV 225
Query 216 SLKQIQDAID 225
+ Q++DA+D
Sbjct 226 TPDQLRDALD 235
>gi|253798929|ref|YP_003031930.1| hypothetical protein TBMG_01967 [Mycobacterium tuberculosis KZN
1435]
gi|254232189|ref|ZP_04925516.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|254364836|ref|ZP_04980882.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
31 more sequence titles
Length=242
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/250 (25%), Positives = 104/250 (42%), Gaps = 40/250 (16%)
Query 1 MRADMSVTSMLDREVYVYAEVDKLIGLPAGTAKRWINGYERGGKDHP-----PILRVTP- 54
M D + D +Y AE + + +P T W +GYER + P PI+ P
Sbjct 4 MAGDQELELRFDVPLYTLAEASRYLVVPRATLATWADGYERRPANAPAVQGQPIITALPH 63
Query 55 --GATPWVTWGEFVETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTH 112
G+ + + E +L +R RA + R R +L + + ++ P +
Sbjct 64 PTGSHARLPFVGIAEAYVLNAFR----------RAGVPMQRIRPSLDWLIKNVGPH-ALA 112
Query 113 ERDLTMGGEEI----------GLPD-----AEVTIRTGQALLGD--ARWLASIATPGRDE 155
+DL G E+ G PD + R+GQ + + +L I+ D
Sbjct 113 SQDLCTDGAEVLWRFAERSGEGSPDDLVVRGLIVPRSGQYVFKEIVEHYLQQISF-ADDN 171
Query 156 VGEAVIVELPVDKAFPEIVINPSRYSGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGL 215
+ A ++ LP +V++P R GQP F G V + + G + +A DYG+
Sbjct 172 L--ASMIRLP-QYGDANVVLDPRRGYGQPVFDGSGVRVADVLGPLRAGATFQAVADDYGV 228
Query 216 SLKQIQDAID 225
+ Q++DA+D
Sbjct 229 TPDQLRDALD 238
>gi|15841501|ref|NP_336538.1| hypothetical protein MT2074 [Mycobacterium tuberculosis CDC1551]
gi|13881743|gb|AAK46352.1| hypothetical protein MT2074 [Mycobacterium tuberculosis CDC1551]
Length=262
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/250 (25%), Positives = 104/250 (42%), Gaps = 40/250 (16%)
Query 1 MRADMSVTSMLDREVYVYAEVDKLIGLPAGTAKRWINGYERGGKDHP-----PILRVTP- 54
M D + D +Y AE + + +P T W +GYER + P PI+ P
Sbjct 24 MAGDQELELRFDVPLYTLAEASRYLVVPRATLATWADGYERRPANAPAVQGQPIITALPH 83
Query 55 --GATPWVTWGEFVETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTH 112
G+ + + E +L +R RA + R R +L + + ++ P +
Sbjct 84 PTGSHARLPFVGIAEAYVLNAFR----------RAGVPMQRIRPSLDWLIKNVGPH-ALA 132
Query 113 ERDLTMGGEEI----------GLPD-----AEVTIRTGQALLGD--ARWLASIATPGRDE 155
+DL G E+ G PD + R+GQ + + +L I+ D
Sbjct 133 SQDLCTDGAEVLWRFAERSGEGSPDDLVVRGLIVPRSGQYVFKEIVEHYLQQISF-ADDN 191
Query 156 VGEAVIVELPVDKAFPEIVINPSRYSGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGL 215
+ A ++ LP +V++P R GQP F G V + + G + +A DYG+
Sbjct 192 L--ASMIRLP-QYGDANVVLDPRRGYGQPVFDGSGVRVADVLGPLRAGATFQAVADDYGV 248
Query 216 SLKQIQDAID 225
+ Q++DA+D
Sbjct 249 TPDQLRDALD 258
>gi|330954325|gb|EGH54585.1| hypothetical protein PSYCIT7_23745 [Pseudomonas syringae Cit
7]
Length=230
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/239 (26%), Positives = 96/239 (41%), Gaps = 28/239 (11%)
Query 1 MRADMSVTSMLDREVYVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPILRVTPGAT--- 57
M S +L +Y AE G+PA +RWI GY G DHP + TP
Sbjct 1 MNTTTSPRRLLGLGLYTPAEASSYTGIPAKDIRRWIFGYSAAGVDHPGLW--TPEVAFLD 58
Query 58 -PWVTWGEFVETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDL 116
+ + + +E R + +R + V + R+A + R F RYP R T RD+
Sbjct 59 DKLLGFHDLLEIRFVHAFR-QHDVSLQAIRSASLQAREMFGQRYPFTCRR--FQTDGRDI 115
Query 117 TMGGEEIGLPDAEVTIRTG-QALLGDAR---WLASIATP----GRDEVGEAVIVELPVDK 168
A V TG +ALL R + TP G D GE K
Sbjct 116 F----------ATVLDETGDEALLDLVRRQYAFKQVITPSLYEGIDYAGEESAKRWYPVK 165
Query 169 AFPEIVINPSRYSGQPTFVGRRVSPVTIAQ-MVDGGEEREDLAADYGLSLKQIQDAIDY 226
+V++P+R G+P + TI + G+ + +A Y ++ ++ A++Y
Sbjct 166 RSKAVVLDPARNFGKPVLATTGIDTATIYHSYLAEGQNAKRVALLYEIAPVAVKAAVNY 224
>gi|17232672|ref|NP_489220.1| hypothetical protein alr5180 [Nostoc sp. PCC 7120]
gi|17134319|dbj|BAB76879.1| alr5180 [Nostoc sp. PCC 7120]
Length=233
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/223 (24%), Positives = 99/223 (45%), Gaps = 27/223 (12%)
Query 16 YVYAEVDKLIGLPAGTAKRWING----YERGGKDHPPILRVTPGATPWVTWGEFVETRML 71
Y ++ + + +PAGT + W G G P++++ +++ VE +L
Sbjct 16 YSISDAARYLRIPAGTIRSWTVGRHYPISNGSNFFRPLIQICNLKPRLLSFTNLVEVHVL 75
Query 72 AEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGGEEI-----GLP 126
R ++ + + R A++ + +F + +PLA ER LT G + L
Sbjct 76 RAIRKHHQIDLGKVRDALDFIDEQFQISHPLAR--------ERFLTDGVDLFIERYGSLI 127
Query 127 DAEVTIRTGQALLGDARWLASIATPGRDEVGEAVIVELPVDKAFPE-----IVINPSRYS 181
+A +++T L DA + A + D+ G A+ + P ++ E +V++P
Sbjct 128 NASKSVKTE---LKDA-FNAHLERIEPDDTGLAIKL-YPFTRSHEEDNPRFVVVDPRIAF 182
Query 182 GQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAI 224
G+ VG +S +A+ GE ++LA DY I++AI
Sbjct 183 GRLVIVGTGISTRVLAERYQAGESIDELAYDYDCDRLMIEEAI 225
>gi|300783741|ref|YP_003764032.1| hypothetical protein AMED_1819 [Amycolatopsis mediterranei U32]
gi|299793255|gb|ADJ43630.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
Length=222
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/219 (25%), Positives = 91/219 (42%), Gaps = 22/219 (10%)
Query 13 REVYVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPILRVT------PGATPWVTWGEFV 66
R + A+ + +G+P T RW GY RGG P+L ++ + P++
Sbjct 9 RPLMSMADAARHLGIPQQTFHRWARGYPRGG----PLLHISEPESIRQASVPFIA---LA 61
Query 67 ETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGGEEIGLP 126
E +L R P R R A+ +L+ F Y L + P L T + +
Sbjct 62 EAWVLEGLRQAGVRP-QRIRPALAQLQREFGREYVL--VSPALVTDGISVLWDFAKTEAG 118
Query 127 DAEVTIRTGQALLGD--ARWLASIATPGRDEVGEAVIVELPVDKAFPEIVINPSRYSGQP 184
+ R+GQ ++ + +L + D + K + I+P R SGQP
Sbjct 119 AGLIEGRSGQTVIREIVQDYLTYVGFGSDDYPNHLKLKTFEPSK----VAIDPYRSSGQP 174
Query 185 TFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDA 223
FVG +A M+ GEE +A ++G+ ++ ++ A
Sbjct 175 IFVGSGARVSNVAAMLKAGEEPAVVAEEHGIGIEAVRAA 213
>gi|257060984|ref|YP_003138872.1| hypothetical protein Cyan8802_3199 [Cyanothece sp. PCC 8802]
gi|256591150|gb|ACV02037.1| hypothetical protein Cyan8802_3199 [Cyanothece sp. PCC 8802]
Length=233
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/219 (22%), Positives = 89/219 (41%), Gaps = 19/219 (8%)
Query 16 YVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPILRVT---PGATPWV-TWGEFVETRML 71
Y + + + +P+GT + W G D R P P++ ++ VE +L
Sbjct 16 YSIGDAARYLRIPSGTIRSWTIGRNYPITDGSTFFRPVIDIPKKKPYLLSFINLVEVHIL 75
Query 72 AEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGGEEIGLPDAEVT 131
R ++ + + R A++ L +FN+ +PLA+ + G ++ +
Sbjct 76 RAIRQEHQIQLNKVREALDYLDEQFNIPHPLAN---------EEFRTDGVDLFIEKYGTL 126
Query 132 IRTGQALLGDARWLASIATPGRDEVGEAVIVEL-----PVDKAFPEIV-INPSRYSGQPT 185
I Q D R ++ + + ++L P ++ P+IV I+P G+
Sbjct 127 INASQKGQLDLRNKLNLHLERIEPDDSGLAIKLYPFTRPHEENNPKIVVIDPRIAFGRLV 186
Query 186 FVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAI 224
+ + + G+ EDLA DYG L IQ+AI
Sbjct 187 IANTGIPTSILKERFHAGDTIEDLAYDYGCDLLSIQEAI 225
>gi|86143518|ref|ZP_01061903.1| hypothetical protein MED217_13004 [Leeuwenhoekiella blandensis
MED217]
gi|85829965|gb|EAQ48426.1| hypothetical protein MED217_13004 [Leeuwenhoekiella blandensis
MED217]
Length=225
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/217 (24%), Positives = 81/217 (38%), Gaps = 23/217 (10%)
Query 19 AEVDKLIGLPAGTAKRWINGYERG--GKDHPPILRVTPGATPWVTWGEFVETRMLAEYRD 76
E+ ++ + RWIN Y G K++ V++ FVE ++ ++ +
Sbjct 17 TEIADILNVKYHHIHRWINIYWDGKLSKEYGEKYSWVTDGKRAVSFHTFVEFYVMMQFSE 76
Query 77 RRKVPIVRQRAAIEELRARFNLRYPLA--HLRPFLSTHERDLTMGGEEIGLPDAEVTIRT 134
P +A E L +N +P A H+ + T +R + +
Sbjct 77 AGVKPREVMKAHTE-LSELYNTAFPFALQHVLENIHTDKRKIYFD-------------KD 122
Query 135 GQALLGDARWLASIATPGRDEVGEAVIVELPVDKAFP-----EIVINPSRYSGQPTFVGR 189
G L D ++ V E K +P IVI+P R GQP F
Sbjct 123 GSTLTLDGSKQFNLKLIQDFCVKLEFNNENLASKYYPLGKKKSIVIDPERKFGQPVFKTH 182
Query 190 RVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAIDY 226
P I GE E +AA Y L+ +++DAI Y
Sbjct 183 NTFPDIIYDHYQAGESIEYIAAIYELNKAEVRDAIQY 219
>gi|271970293|ref|YP_003344489.1| hypothetical protein Sros_9124 [Streptosporangium roseum DSM
43021]
gi|270513468|gb|ACZ91746.1| hypothetical protein Sros_9124 [Streptosporangium roseum DSM
43021]
Length=241
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 59/232 (26%), Positives = 84/232 (37%), Gaps = 44/232 (18%)
Query 15 VYVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPI----LRVTPGA----TPWVTWGEFV 66
+Y + LI +P T + W GY D P + L T GA P+V
Sbjct 22 LYTKGQAADLIDVPRQTFRNWAVGYVYKRIDQPVVAAEPLVTTAGAHGATVPFVG---LA 78
Query 67 ETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHE-----RDLTMGGE 121
E MLA +R KVP+ R R AI L L LA R E ++ T
Sbjct 79 EAYMLAAFRSA-KVPMQRIRPAIRWLEENIGLEQALASERLMTDGAEVLWDFKEHTDDPA 137
Query 122 EIGLPDAEVTIRTGQALLG------------DARWLASIATPGRDEVGEAVIVELPVDKA 169
E D V R+GQ + W+ I PG V
Sbjct 138 EREAVDGLVVARSGQQVFRPVVRDYLRRVTYQDGWMKVIHLPGYGRV------------- 184
Query 170 FPEIVINPSRYSGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQ 221
++ ++P GQPT R + + + GE ++A DY L L +++
Sbjct 185 --DVTVDPWINGGQPTLTRRGIRVADVLSRLRAGEGAGEVAEDYDLQLNEVE 234
>gi|257484006|ref|ZP_05638047.1| hypothetical protein PsyrptA_12178 [Pseudomonas syringae pv.
tabaci ATCC 11528]
gi|331013024|gb|EGH93080.1| hypothetical protein PSYTB_25841 [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length=230
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 56/228 (25%), Positives = 86/228 (38%), Gaps = 24/228 (10%)
Query 10 MLDREVYVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPI--LRVTPGATPWVTWGEFVE 67
+L +Y AE G+PA +RWI GY G DHP + V + + + +E
Sbjct 10 LLGVGLYTPAEASSYTGIPAKDIRRWIFGYSAAGVDHPGLWTAEVAFLNDKLLGFHDLLE 69
Query 68 TRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGGEEIGLPD 127
R + +R + V + R+A + R F YP R T RD+
Sbjct 70 IRFVHAFR-QHGVSLQAIRSASLQAREMFGQLYPFTCRR--FQTDGRDIF---------- 116
Query 128 AEVTIRTGQALLGD----ARWLASIATP----GRDEVGEAVIVELPVDKAFPEIVINPSR 179
A V TG L D + TP G D GE K +V++P+R
Sbjct 117 ATVLDETGDEALLDLVKRQYAFKQVITPSLYEGIDYAGEESAKRWYPVKRSKAVVLDPAR 176
Query 180 YSGQPTFVGRRVSPVTIAQ-MVDGGEEREDLAADYGLSLKQIQDAIDY 226
G+P + I + G+ + +A Y + ++ AI Y
Sbjct 177 NFGKPVLATTGIDTAAIYHSYLAEGQNTKRVALLYEIPPVAVKAAITY 224
>gi|320330221|gb|EFW86206.1| hypothetical protein PsgRace4_09447 [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330880430|gb|EGH14579.1| hypothetical protein Pgy4_16924 [Pseudomonas syringae pv. glycinea
str. race 4]
Length=230
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 55/235 (24%), Positives = 90/235 (39%), Gaps = 28/235 (11%)
Query 8 TSMLDREVYVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPILRVTPGAT----PWVTWG 63
+ +L +Y AE G+PA +RWI GY G DHP + TP + +
Sbjct 8 SRLLGVGLYTPAEASSYTGIPAKDIRRWIFGYSAAGVDHPGLW--TPEVAFLDDKLLGFH 65
Query 64 EFVETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGGEEI 123
+ +E R + +R + V + R+A + R F YP R T RD+
Sbjct 66 DLLEIRFVHAFR-QHGVSLQAIRSASLQAREMFGQLYPFTCRR--FQTDGRDIF------ 116
Query 124 GLPDAEVTIRTGQALLGD----ARWLASIATP----GRDEVGEAVIVELPVDKAFPEIVI 175
A V TG L D + TP G D GE K +V+
Sbjct 117 ----ATVLDETGDEALLDLVKRQYAFKQVITPSLYEGIDYAGEESAKRWYPVKRSKAVVL 172
Query 176 NPSRYSGQPTFVGRRVSPVTIAQ-MVDGGEEREDLAADYGLSLKQIQDAIDYTKK 229
+P+R G+P + I + G+ + +A Y + ++ A+++ +
Sbjct 173 DPARNFGKPVLATTGIDTAAIYHSYLAEGQNAKRVALLYEIPPAAVEAAVNFEHR 227
>gi|320326056|gb|EFW82113.1| hypothetical protein PsgB076_03444 [Pseudomonas syringae pv.
glycinea str. B076]
Length=230
Score = 42.4 bits (98), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 55/235 (24%), Positives = 90/235 (39%), Gaps = 28/235 (11%)
Query 8 TSMLDREVYVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPILRVTPGAT----PWVTWG 63
+ +L +Y AE G+PA +RWI GY G DHP + TP + +
Sbjct 8 SRLLGVGLYTPAEASSYTGIPAKDIRRWIFGYSAAGVDHPGLW--TPEVAFLDDKLLGFH 65
Query 64 EFVETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGGEEI 123
+ +E R + +R + V + R+A + R F YP R T RD+
Sbjct 66 DLLEIRFVHAFR-QHGVSLQAIRSASLQAREMFGQLYPFTCRR--FQTDGRDIF------ 116
Query 124 GLPDAEVTIRTGQALLGD----ARWLASIATP----GRDEVGEAVIVELPVDKAFPEIVI 175
A V TG L D + TP G D GE K +V+
Sbjct 117 ----ATVLDETGDEALLDLVKRQYAFNQVITPSLYEGIDYAGEESAKRWYPVKRSKAVVL 172
Query 176 NPSRYSGQPTFVGRRVSPVTIAQ-MVDGGEEREDLAADYGLSLKQIQDAIDYTKK 229
+P+R G+P + I + G+ + +A Y + ++ A+++ +
Sbjct 173 DPARNFGKPVLATTGIDTAAIYHSYLAEGQNAKRVALLYEIPPAAVEAAVNFEHR 227
>gi|86739668|ref|YP_480068.1| hypothetical protein Francci3_0955 [Frankia sp. CcI3]
gi|86566530|gb|ABD10339.1| conserved hypothetical protein [Frankia sp. CcI3]
Length=239
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 58/238 (25%), Positives = 92/238 (39%), Gaps = 28/238 (11%)
Query 11 LDREVYVYAEVDKLIGLPAGTAKRWINGYERGGKDH-----PPILRVTP---GATPWVTW 62
D +Y AE + +G+P T W GY R PI+ V P T V +
Sbjct 8 FDLPLYSVAEAGRHLGVPTSTFATWAYGYTRHAPGRVPVHGEPIVTVLPRQRHGTAVVPF 67
Query 63 GEFVETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGGEE 122
E +LA R VP+ R R A+ L + + + LA + E +
Sbjct 68 IGLAEGMILAAIRA-AGVPLQRIRPALARLSEQLGIEHVLASRALYTDGAEVLYDFAESQ 126
Query 123 IGLPDAE-----VTIRTGQALLGDA----RWLASIATPGRDEVGEAVIVELPVDKAFPEI 173
P+A V +R GQ + G+ L A+ G ++ LP + +
Sbjct 127 GDTPEARGARELVVVRNGQRVFGEIVESYLRLVEFASDGYPR-----LIRLPRYEP-GSV 180
Query 174 VINPSRYSGQPTFV--GRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAIDYTKK 229
+++P R GQP F G RV GE ++A ++G+ L ++ A+ K
Sbjct 181 IVDPHRGFGQPIFTHGGARVEDAL--GRFHAGEPLAEVAEEFGVPLPDLEGAVRVASK 236
>gi|291571960|dbj|BAI94232.1| hypothetical protein [Arthrospira platensis NIES-39]
Length=76
Score = 42.0 bits (97), Expect = 0.079, Method: Composition-based stats.
Identities = 19/52 (37%), Positives = 29/52 (56%), Gaps = 0/52 (0%)
Query 173 IVINPSRYSGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAI 224
++I+P+ G+PT G + + Q+ D G+ ED+A DY QIQ AI
Sbjct 14 LIIDPNISFGKPTITGTGIPTKIVTQLFDAGDSIEDIADDYNCQPWQIQQAI 65
>gi|28868150|ref|NP_790769.1| hypothetical protein PSPTO_0930 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213970181|ref|ZP_03398312.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato
T1]
gi|28851387|gb|AAO54464.1| conserved protein of unknown function [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213925062|gb|EEB58626.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato
T1]
Length=230
Score = 41.6 bits (96), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 53/241 (22%), Positives = 96/241 (40%), Gaps = 26/241 (10%)
Query 1 MRADMSVTSMLDREVYVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPIL--RVTPGATP 58
M S + +L +Y ++ G+PA +RW+ GY G +HP + +
Sbjct 1 MNTTASPSRLLGVGLYTASQASSYTGIPAKDIRRWMFGYSASGVEHPGLWAPEIAFLDDK 60
Query 59 WVTWGEFVETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTM 118
+ + + +E R + +R + V + R+A + R F RYP R T RD+
Sbjct 61 LLGFHDLLEIRFVHAFR-QHGVSLQAIRSASLQAREMFGQRYPFTCRR--FQTDGRDIF- 116
Query 119 GGEEIGLPDAEVTIRTGQALLGD----ARWLASIATP----GRDEVGEAVIVELPVDKAF 170
A V TG L D + TP G D GE K
Sbjct 117 ---------ATVLDETGDEALLDLVKRQYAFKQVITPSLYEGIDYAGEESAKRWYPVKRS 167
Query 171 PEIVINPSRYSGQP--TFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAIDYTK 228
+V++P+R G+P T G + + + + + G+ + +A Y + ++ A+++
Sbjct 168 KAVVLDPARNFGKPVLTITGIDTAAIYHSYLAE-GQSAKRVALLYEIPPAAVEAAVNFEH 226
Query 229 K 229
+
Sbjct 227 R 227
>gi|343460604|gb|AEM39040.1| protein of unknown function DUF433 [Pyrolobus fumarii 1A]
Length=94
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/64 (30%), Positives = 37/64 (58%), Gaps = 0/64 (0%)
Query 166 VDKAFPEIVINPSRYSGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAID 225
VD+ IV++P +G+P G R + I +++ G + E++A DY +SL+ ++ A+
Sbjct 18 VDELLKRIVVDPKIMAGKPVIRGTRSTVDMILELLAAGMKPEEMAEDYNISLEDVRAALL 77
Query 226 YTKK 229
Y +
Sbjct 78 YAAR 81
>gi|338997580|ref|ZP_08636275.1| hypothetical protein GME_06235 [Halomonas sp. TD01]
gi|338765554|gb|EGP20491.1| hypothetical protein GME_06235 [Halomonas sp. TD01]
Length=226
Score = 40.8 bits (94), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/226 (23%), Positives = 96/226 (43%), Gaps = 11/226 (4%)
Query 7 VTSMLDREVYVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPILRVTP---GATPWVTWG 63
+T+ + +Y + ++LIG+ A +RW+ R K P+ P GA +++
Sbjct 1 MTAFTNIGLYSPKQAERLIGVEADKIRRWLMPA-RSTKG--PLWEPEPQALGAEDTLSFK 57
Query 64 EFVETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGGEEI 123
+ +E R +A++R V + R A+ L YPL + P L T + + + E
Sbjct 58 DLLELRAVAKFRSH-NVSLSVIREALHALSELLQRDYPL--INPQLCTDGQKVFLKALEE 114
Query 124 GLPDAEVTIRTGQALLGDARWLASIATPGRDEVGEAVIVELPVDKAFPEIVINPSRYSGQ 183
A + + Q D + G + E V D P IVI+P G+
Sbjct 115 NGETAVIDLVKRQNAFEDV--IVPSLRAGIEFNAEGDPVRWHPDPEDPSIVIDPRFAFGK 172
Query 184 PTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAIDYTKK 229
P + + T+AQ + ED A Y ++ ++++ A+ + ++
Sbjct 173 PIVLPSHMPTSTLAQAAEVEGSAEDAARAYDVTQEEVERAVKFEER 218
>gi|332710244|ref|ZP_08430195.1| hypothetical protein LYNGBM3L_49140 [Lyngbya majuscula 3L]
gi|332351023|gb|EGJ30612.1| hypothetical protein LYNGBM3L_49140 [Lyngbya majuscula 3L]
Length=105
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (52%), Gaps = 1/60 (1%)
Query 173 IVINPSRYSGQPTFVGRRVSPVTIAQM-VDGGEEREDLAADYGLSLKQIQDAIDYTKKYR 231
I INP G+P G R++ + I ++ E ED+A DY LSL + A+ Y +R
Sbjct 11 ISINPEIRFGKPCITGTRIAVIDIVNCYLNLSESLEDIAKDYNLSLASVHAAMAYYYDHR 70
>gi|296448575|ref|ZP_06890448.1| conserved hypothetical protein [Methylosinus trichosporium OB3b]
gi|296253915|gb|EFH01069.1| conserved hypothetical protein [Methylosinus trichosporium OB3b]
Length=235
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 56/229 (25%), Positives = 93/229 (41%), Gaps = 22/229 (9%)
Query 16 YVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPILRVTPGATPWVTWGEFVETRMLAEYR 75
Y E +LI PA + +RW+ GY K+ + V P TP + E R+ +R
Sbjct 18 YTIPEASRLIKTPARSIRRWLGGYSY--KNDREVTEVPPLWTPQLPR---FEDRLEIGFR 72
Query 76 DRRKVPIVRQRA----AIEELRARFNLRYPLAHL-RPFLSTHERDLTMGGEEIGLPDAEV 130
D ++ VR ++ +R L A RPF R G I + E+
Sbjct 73 DLIELRFVRAFLDAGLGLKTIRDCLALARDCAKDDRPF---STRRFQTDGRTIFMESLEL 129
Query 131 TIRTGQALLGDAR-----WLASIATPGRD-EVGEAVIVELPVDKAFPEIVINPSRYSGQP 184
+ G+ L D + + + RD +V + V+ IV++P R GQP
Sbjct 130 S---GEGELLDLKKRQYAFKRVVERTFRDLDVSDEVVTRWRPFNGKESIVVDPGRAFGQP 186
Query 185 TFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAIDYTKKYRLA 233
V V +A+ V+ E +A Y +S+ ++D++ + R A
Sbjct 187 IAAEFGVPTVALAEAVEAEGSVERVAMIYDVSIGAVRDSVKFEASLRAA 235
>gi|340525132|gb|AEK40337.1| hypothetical protein RAM_09235 [Amycolatopsis mediterranei S699]
Length=126
Score = 39.3 bits (90), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/52 (35%), Positives = 31/52 (60%), Gaps = 0/52 (0%)
Query 172 EIVINPSRYSGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDA 223
++ I+P R SGQP FVG +A M+ GEE +A ++G+ ++ ++ A
Sbjct 66 KVAIDPYRSSGQPIFVGSGARVSNVAAMLKAGEEPAVVAEEHGIGIEAVRAA 117
>gi|119716257|ref|YP_923222.1| hypothetical protein Noca_2025 [Nocardioides sp. JS614]
gi|119536918|gb|ABL81535.1| conserved hypothetical protein [Nocardioides sp. JS614]
Length=240
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 59/228 (26%), Positives = 92/228 (41%), Gaps = 29/228 (12%)
Query 15 VYVYAEVDKLIGLPAGTAKRWINGYE-----RGGKDHPPILRVTPG----ATPWVTWGEF 65
+Y AE + +GLP T + W GY R P + + G + P+V
Sbjct 17 LYTQAEASRFLGLPESTFRNWARGYHSIVRGREVMGAPILTALNNGHRGASIPFVG---L 73
Query 66 VETRMLAEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLT----MGGE 121
E L R + VP+ R R A+E+L F L + LA + + E GG+
Sbjct 74 AEGYALTAIR-KSGVPLQRIRPALEQLNTEFGLTHALASKKLYTDGAEVLFDYAERTGGD 132
Query 122 EIGLPDAEVTIRTGQALLGDA--RWLASIATPGRDEVGEAVIVELPVDKAFPEIVINPSR 179
E V +R Q + + +L I G D G A V LP + E+V + R
Sbjct 133 ERDAVRELVVVRNNQRVFAEVVEDYLHRIEF-GAD--GFATAVPLPGFRK-AELVADVRR 188
Query 180 YSGQPTFVGRRVSPVTIAQMVDGGEEREDL---AADYGLSLKQIQDAI 224
GQP F R V + V + D+ + +YG+ +++D +
Sbjct 189 AFGQPVF---RRGGVRLEDAVSLFKAERDINVVSEEYGIPRDELEDVL 233
>gi|115345560|ref|YP_771742.1| hypothetical protein RD1_A0033 [Roseobacter denitrificans OCh
114]
gi|115292881|gb|ABI93334.1| protein of unknown function (DUF433) [Roseobacter denitrificans
OCh 114]
Length=130
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/59 (29%), Positives = 35/59 (60%), Gaps = 1/59 (1%)
Query 173 IVINPSRYSGQPTFVGRRVSPVTIAQMVDGGEEREDLAADY-GLSLKQIQDAIDYTKKY 230
+V++P + G+P G R++ ++ ++GGE E+L DY +S++ + A+ Y K +
Sbjct 56 LVVDPEIFGGEPILKGTRITCRSVLGRIEGGETLEELVEDYPEISMEAFEAALVYAKAH 114
>gi|298242599|ref|ZP_06966406.1| protein of unknown function DUF433 [Ktedonobacter racemifer DSM
44963]
gi|297555653|gb|EFH89517.1| protein of unknown function DUF433 [Ktedonobacter racemifer DSM
44963]
Length=80
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/56 (34%), Positives = 31/56 (56%), Gaps = 0/56 (0%)
Query 171 PEIVINPSRYSGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAIDY 226
P I+ N + Y+G+P G R + + + G++ E++A LSL Q+ DAI Y
Sbjct 9 PYIIRNTAIYAGEPIIEGTRTTVRHVILLFQSGQDPEEIADSQHLSLAQVYDAISY 64
>gi|295838072|ref|ZP_06825005.1| toxin-antitoxin system, antitoxin component [Streptomyces sp.
SPB74]
gi|295826826|gb|EDY46696.2| toxin-antitoxin system, antitoxin component [Streptomyces sp.
SPB74]
Length=237
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 44/148 (30%), Positives = 64/148 (44%), Gaps = 27/148 (18%)
Query 99 RYPLA-HLRPFLSTHERDLTMGG--EEIGLPDAEVTIRTG--------QALLGDARWLAS 147
R PLA H RP HERD GG E G P V+ R + LGD R
Sbjct 83 RAPLAAHARP---AHERDQGRGGGREAYGTPYGLVSRRIATDGVDIFVEHGLGDLRRARD 139
Query 148 IATPGRDEVGE-------AVIVELPVD---KAFPE---IVINPSRYSGQPTFVGRRVSPV 194
P + V + A + P + +PE +VI+P G P RV+
Sbjct 140 GQAPIHEVVSDYLRYLNWAPDDDFPYSLRLRQYPESVPVVIDPRFGHGLPVVAANRVAVK 199
Query 195 TIAQMVDGGEEREDLAADYGLSLKQIQD 222
T+ + + GE ED+A D+G++ +Q+ +
Sbjct 200 TLTDLWEAGESVEDIAYDFGMAPEQVDE 227
>gi|83748655|ref|ZP_00945673.1| Hypothetical Protein RRSL_02032 [Ralstonia solanacearum UW551]
gi|207741927|ref|YP_002258319.1| hypothetical protein RSIPO_00106 [Ralstonia solanacearum IPO1609]
gi|83724699|gb|EAP71859.1| Hypothetical Protein RRSL_02032 [Ralstonia solanacearum UW551]
gi|206590773|emb|CAQ56385.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
gi|206593313|emb|CAQ60240.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
Length=221
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 48/232 (21%), Positives = 91/232 (40%), Gaps = 39/232 (16%)
Query 15 VYVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPILR--VTPGATPWVTWGEFVETRMLA 72
+Y E ++L G P+ RW+ GY PP+ + ++ + + + +E R++
Sbjct 8 LYTLGEAERLTGAPSREVSRWLFGYSFKDGKSPPLWKTQLSELDEKVIGFRDLMELRIVK 67
Query 73 EYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGGEEIGLPDAEVTI 132
+R + + R AIE R F + YP + R FL+ + +E G + +
Sbjct 68 AFR-MHDISLRVIRTAIENAREIFAIDYPFSANR-FLTDGKSIFYEALKEHGEVELTDVV 125
Query 133 RTGQALLGDARWLASIATPGRDEVGEAVI-------VELPVD---------KAFPEIVIN 176
R R V E ++ +E D K+ IV++
Sbjct 126 R-------------------RQIVFEHIVRPELYMGIEFTADGRAKRWHPLKSSNIIVLD 166
Query 177 PSRYSGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAIDYTK 228
P G+P V T+A + ++ +A+ YG+ + ++ AI Y +
Sbjct 167 PDIAFGKPILADYGVRTDTVADAYRTEKSKKRVASLYGIPVSAVEAAIRYER 218
>gi|300867555|ref|ZP_07112205.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300334443|emb|CBN57375.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
Length=95
Score = 38.1 bits (87), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/60 (37%), Positives = 31/60 (52%), Gaps = 1/60 (1%)
Query 173 IVINPSRYSGQPTFVGRRVSPVTIAQM-VDGGEEREDLAADYGLSLKQIQDAIDYTKKYR 231
I I P G+P G R+S IA+M + GE E++A DY LS + A+ Y +R
Sbjct 11 IEITPGVLGGKPRIAGHRISVAQIAEMYLKMGESIEEIARDYNLSPASVHAAMTYYYDHR 70
>gi|269976999|ref|ZP_06183973.1| putative toxin-antitoxin system, antitoxin component [Mobiluncus
mulieris 28-1]
gi|269934830|gb|EEZ91390.1| putative toxin-antitoxin system, antitoxin component [Mobiluncus
mulieris 28-1]
Length=226
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 54/230 (24%), Positives = 94/230 (41%), Gaps = 43/230 (18%)
Query 15 VYVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPILRVTPG--ATPWVTWGE-FVETRML 71
+Y ++V +++ + TA+RW E G+ V G + P+++ E FV
Sbjct 15 LYSVSDVARIVKMNPSTARRWTQPDE-SGRAMLYRCSVPSGELSMPFISLAEAFVAKGFR 73
Query 72 AEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGGEEIGLPDAEVT 131
A VP+ R R A++ LR + + LA ER T G AEV
Sbjct 74 AA-----GVPLQRIRPAVQVLRKELGIEHVLAS--------ERLYTDG--------AEVL 112
Query 132 IRTGQALLGDARWLASIATPGR-----DEVGEAVIVELPVDKAFPE-----------IVI 175
GQ D +++ ++ G +EV E + ++ ++ FP +V+
Sbjct 113 YDYGQT--EDGQYVRNLVVAGTGQRVFNEVVEQFLRKITFEQDFPVKISLRKYGDELVVV 170
Query 176 NPSRYSGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAID 225
NP G+P + I V G+ E L ++G+ + I+D +D
Sbjct 171 NPLINYGEPMLERCGIRIRDIVGYVQAGDSYEALEENFGIPVNTIRDLMD 220
>gi|305662923|ref|YP_003859211.1| hypothetical protein Igag_0493 [Ignisphaera aggregans DSM 17230]
gi|304377492|gb|ADM27331.1| protein of unknown function DUF433 [Ignisphaera aggregans DSM
17230]
Length=78
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/64 (27%), Positives = 36/64 (57%), Gaps = 0/64 (0%)
Query 166 VDKAFPEIVINPSRYSGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAID 225
+++ IV++P G+P G R++ I +++ G E++A DY +S++ ++ A+
Sbjct 1 MEELLKRIVVDPKVMGGKPVIRGTRITVDLILELLASGMTPEEIAEDYKISVEDVRAALL 60
Query 226 YTKK 229
Y K
Sbjct 61 YAAK 64
>gi|307701672|ref|ZP_07638688.1| putative toxin-antitoxin system, antitoxin component [Mobiluncus
mulieris FB024-16]
gi|307613175|gb|EFN92428.1| putative toxin-antitoxin system, antitoxin component [Mobiluncus
mulieris FB024-16]
Length=226
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 54/230 (24%), Positives = 94/230 (41%), Gaps = 43/230 (18%)
Query 15 VYVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPILRVTPG--ATPWVTWGE-FVETRML 71
+Y ++V +++ + TA+RW E G+ V G + P+++ E FV
Sbjct 15 LYSVSDVARIVKMNPSTARRWTQPDE-SGRAMLYRCSVPSGELSMPFISLAEAFVAKGFR 73
Query 72 AEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGGEEIGLPDAEVT 131
A VP+ R R A++ LR + + LA ER T G AEV
Sbjct 74 AA-----GVPLQRIRPAVQVLRKELGIEHVLAS--------ERLYTDG--------AEVL 112
Query 132 IRTGQALLGDARWLASIATPGR-----DEVGEAVIVELPVDKAFPE-----------IVI 175
GQ D +++ ++ G +EV E + ++ ++ FP +V+
Sbjct 113 YDYGQT--EDGQYVRNLVVAGTGQRVFNEVVEQFLRKITFEQDFPVKISLRKYGDELVVV 170
Query 176 NPSRYSGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAID 225
NP G+P + I V G+ E L ++G+ + I+D +D
Sbjct 171 NPLINYGEPMLERCGIRIRDIVGYVQAGDSYEALEENFGIPVDTIRDLMD 220
>gi|306819377|ref|ZP_07453085.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
gi|304647864|gb|EFM45181.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
Length=235
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 54/230 (24%), Positives = 94/230 (41%), Gaps = 43/230 (18%)
Query 15 VYVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPILRVTPG--ATPWVTWGE-FVETRML 71
+Y ++V +++ + TA+RW E G+ V G + P+++ E FV
Sbjct 24 LYSVSDVARIVKMNPSTARRWTQPDE-SGRAMLYRCSVPSGELSMPFISLAEAFVAKGFR 82
Query 72 AEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGGEEIGLPDAEVT 131
A VP+ R R A++ LR + + LA ER T G AEV
Sbjct 83 AA-----GVPLQRIRPAVQVLRKELGIEHVLAS--------ERLYTDG--------AEVL 121
Query 132 IRTGQALLGDARWLASIATPGR-----DEVGEAVIVELPVDKAFPE-----------IVI 175
GQ D +++ ++ G +EV E + ++ ++ FP +V+
Sbjct 122 YDYGQT--EDGQYVRNLVVAGTGQRVFNEVVEQFLRKITFEQDFPVKISLRKYGDELLVV 179
Query 176 NPSRYSGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAID 225
NP G+P + I V G+ E L ++G+ + I+D +D
Sbjct 180 NPLINYGEPMLERCGIRIRDIVGYVQAGDSYEALEENFGIPVDTIRDLMD 229
>gi|227876101|ref|ZP_03994220.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
gi|227843400|gb|EEJ53590.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
Length=235
Score = 37.0 bits (84), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 54/230 (24%), Positives = 94/230 (41%), Gaps = 43/230 (18%)
Query 15 VYVYAEVDKLIGLPAGTAKRWINGYERGGKDHPPILRVTPG--ATPWVTWGE-FVETRML 71
+Y ++V +++ + TA+RW E G+ V G + P+++ E FV
Sbjct 24 LYSVSDVARIVKMNPSTARRWTQPDE-SGRAMLYRCSVPSGELSMPFISLAEAFVAKGFR 82
Query 72 AEYRDRRKVPIVRQRAAIEELRARFNLRYPLAHLRPFLSTHERDLTMGGEEIGLPDAEVT 131
A VP+ R R A++ LR + + LA ER T G AEV
Sbjct 83 AA-----GVPLQRIRPAVQVLRKELGIEHILAS--------ERLYTDG--------AEVL 121
Query 132 IRTGQALLGDARWLASIATPGR-----DEVGEAVIVELPVDKAFPE-----------IVI 175
GQ D +++ ++ G +EV E + ++ ++ FP +V+
Sbjct 122 YDYGQT--EDGQYVRNLVVAGTGQRVFNEVVEQFLRKITFEQDFPVKISLRKYGDELLVV 179
Query 176 NPSRYSGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGLSLKQIQDAID 225
NP G+P + I V G+ E L ++G+ + I+D +D
Sbjct 180 NPLINYGEPMLERCGIRIRDIVGYVQAGDSYEALEENFGIPVDTIRDLMD 229
>gi|14600475|ref|NP_146990.1| electron transfer flavoprotein alpha-subunit [Aeropyrum pernix
K1]
gi|5103525|dbj|BAA79046.1| electron transfer flavoprotein alpha-subunit [Aeropyrum pernix
K1]
Length=308
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/88 (36%), Positives = 47/88 (54%), Gaps = 10/88 (11%)
Query 141 DARWLASIATPGRDEVGEAVIVELPVDKAFPEIVINPSRYSG--QPTFVGRRVSPVTIAQ 198
D R +AT RD +G+A +V L V KA E P + SG + FV R SP +IA
Sbjct 9 DPRDFGELATGVRDSLGDAELVFLAVHKAAEE----PGKASGYSEKVFVSRTSSPESIAL 64
Query 199 MVDG--GEEREDLAADYGLSLKQIQDAI 224
+++ EE+ D+ G + K ++DA+
Sbjct 65 LLEKLISEEKPDIIV--GEAYKNLRDAL 90
>gi|260810386|ref|XP_002599945.1| hypothetical protein BRAFLDRAFT_278468 [Branchiostoma floridae]
gi|229285229|gb|EEN55957.1| hypothetical protein BRAFLDRAFT_278468 [Branchiostoma floridae]
Length=334
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/86 (30%), Positives = 37/86 (44%), Gaps = 3/86 (3%)
Query 156 VGEAVIVELPVDKAFPEIVINPSRYSGQPTFVGRRVSPVTIAQMVDGGEEREDLAADYGL 215
VGE V+V + K P R + + P+ A MV GGEE ED+ L
Sbjct 145 VGEVVLVSVCFGKNLPTAGYKQERSVAGGGLLLLGIYPIQFATMVFGGEEPEDITVSGNL 204
Query 216 SLKQIQDAIDYTKKY---RLARLVAA 238
+ + + + KY R+A LV +
Sbjct 205 TDGGVDETVTIVLKYSHNRMATLVCS 230
Lambda K H
0.320 0.138 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 325878760174
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40