BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2316 Length=290 Score E Sequences producing significant alignments: (Bits) Value gi|15609453|ref|NP_216832.1| sugar-transport integral membrane p... 562 3e-158 gi|15841821|ref|NP_336858.1| sugar ABC transporter, permease pro... 560 6e-158 gi|289758440|ref|ZP_06517818.1| sugar-transport integral membran... 558 4e-157 gi|339298840|gb|AEJ50950.1| putative sugar-transport integral me... 519 2e-145 gi|118616957|ref|YP_905289.1| sugar-transport integral membrane ... 491 5e-137 gi|118465669|ref|YP_881305.1| ABC transporter permease [Mycobact... 489 3e-136 gi|41408188|ref|NP_961024.1| hypothetical protein MAP2090 [Mycob... 486 1e-135 gi|296166354|ref|ZP_06848789.1| sugar ABC superfamily ATP bindin... 486 2e-135 gi|240170963|ref|ZP_04749622.1| sugar-transport integral membran... 485 3e-135 gi|254820665|ref|ZP_05225666.1| ABC transporter, permease protei... 476 1e-132 gi|15827944|ref|NP_302207.1| sugar transport integral membrane p... 473 1e-131 gi|342857436|ref|ZP_08714092.1| ABC transporter permease [Mycoba... 468 6e-130 gi|118471050|ref|YP_888739.1| ABC transporter permease [Mycobact... 427 7e-118 gi|333990231|ref|YP_004522845.1| sugar-transport integral membra... 407 7e-112 gi|169628807|ref|YP_001702456.1| sugar ABC transporter permease ... 406 2e-111 gi|317508437|ref|ZP_07966107.1| inner membrane transporter [Segn... 335 4e-90 gi|229818647|ref|YP_002880173.1| binding-protein-dependent trans... 319 4e-85 gi|296394332|ref|YP_003659216.1| binding-protein-dependent trans... 317 1e-84 gi|227497645|ref|ZP_03927863.1| ABC superfamily ATP binding cass... 306 3e-81 gi|257069937|ref|YP_003156192.1| carbohydrate ABC transporter me... 306 3e-81 gi|320094679|ref|ZP_08026436.1| sugar ABC superfamily ATP bindin... 303 2e-80 gi|315605843|ref|ZP_07880875.1| ABC superfamily ATP binding cass... 287 1e-75 gi|154507910|ref|ZP_02043552.1| hypothetical protein ACTODO_0039... 287 2e-75 gi|293190383|ref|ZP_06608815.1| glycerol-3-phosphate ABC transpo... 286 2e-75 gi|269217704|ref|ZP_06161558.1| sn-Glycerol-3-phosphate transpor... 280 2e-73 gi|258510794|ref|YP_003184228.1| binding-protein-dependent trans... 210 2e-52 gi|218288472|ref|ZP_03492762.1| binding-protein-dependent transp... 210 2e-52 gi|293572837|ref|ZP_06683790.1| ABC transporter, permease protei... 209 5e-52 gi|257886996|ref|ZP_05666649.1| ABC transporter [Enterococcus fa... 208 7e-52 gi|257884203|ref|ZP_05663856.1| ABC transporter [Enterococcus fa... 208 8e-52 gi|293567478|ref|ZP_06678825.1| ABC transporter, permease protei... 207 1e-51 gi|257898151|ref|ZP_05677804.1| ABC transporter [Enterococcus fa... 207 1e-51 gi|284029861|ref|YP_003379792.1| binding-protein-dependent trans... 206 4e-51 gi|119718851|ref|YP_925816.1| binding-protein-dependent transpor... 204 1e-50 gi|255974342|ref|ZP_05424928.1| conserved hypothetical protein [... 201 1e-49 gi|294614267|ref|ZP_06694186.1| ABC transporter, permease protei... 200 2e-49 gi|302556095|ref|ZP_07308437.1| binding-protein-dependent transp... 199 5e-49 gi|325567135|ref|ZP_08143802.1| ABC superfamily ATP binding cass... 197 1e-48 gi|269925946|ref|YP_003322569.1| binding-protein-dependent trans... 195 7e-48 gi|251794681|ref|YP_003009412.1| binding-protein-dependent trans... 195 8e-48 gi|297204347|ref|ZP_06921744.1| binding-protein-dependent transp... 195 8e-48 gi|315576589|gb|EFU88780.1| ABC transporter, permease protein [E... 194 1e-47 gi|297157521|gb|ADI07233.1| carbohydrate ABC transporter membran... 194 1e-47 gi|261366251|ref|ZP_05979134.1| glycerol-3-phosphate ABC transpo... 194 1e-47 gi|239617079|ref|YP_002940401.1| binding-protein-dependent trans... 194 1e-47 gi|88855128|ref|ZP_01129793.1| sugar ABC transporter, permease p... 194 1e-47 gi|182417537|ref|ZP_02948864.1| glycerol-3-phosphate ABC transpo... 194 1e-47 gi|160939608|ref|ZP_02086956.1| hypothetical protein CLOBOL_0450... 194 2e-47 gi|239617329|ref|YP_002940651.1| binding-protein-dependent trans... 193 3e-47 gi|29376740|ref|NP_815894.1| ABC transporter permease [Enterococ... 192 3e-47 >gi|15609453|ref|NP_216832.1| sugar-transport integral membrane protein ABC transporter UspA [Mycobacterium tuberculosis H37Rv] gi|148662143|ref|YP_001283666.1| sugar ABC transporter permease protein UspA [Mycobacterium tuberculosis H37Ra] gi|148823516|ref|YP_001288270.1| sugar-transport integral membrane protein ABC transporter uspA [Mycobacterium tuberculosis F11] 39 more sequence titles Length=290 Score = 562 bits (1448), Expect = 3e-158, Method: Compositional matrix adjust. Identities = 290/290 (100%), Positives = 290/290 (100%), Gaps = 0/290 (0%) Query 1 MRDAPRRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVL 60 MRDAPRRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVL Sbjct 1 MRDAPRRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVL 60 Query 61 TDSGFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIA 120 TDSGFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIA Sbjct 61 TDSGFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIA 120 Query 121 VMWRWIVAPTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQ 180 VMWRWIVAPTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQ Sbjct 121 VMWRWIVAPTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQ 180 Query 181 DIHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTD 240 DIHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTD Sbjct 181 DIHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTD 240 Query 241 LVAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYELT 290 LVAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYELT Sbjct 241 LVAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYELT 290 >gi|15841821|ref|NP_336858.1| sugar ABC transporter, permease protein [Mycobacterium tuberculosis CDC1551] gi|31793499|ref|NP_855992.1| sugar-transport integral membrane protein ABC transporter UspA [Mycobacterium bovis AF2122/97] gi|121638202|ref|YP_978426.1| putative sugar-transport integral membrane protein ABC transporter uspA [Mycobacterium bovis BCG str. Pasteur 1173P2] 31 more sequence titles Length=290 Score = 560 bits (1444), Expect = 6e-158, Method: Compositional matrix adjust. Identities = 289/290 (99%), Positives = 290/290 (100%), Gaps = 0/290 (0%) Query 1 MRDAPRRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVL 60 MRDAPRRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVL Sbjct 1 MRDAPRRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVL 60 Query 61 TDSGFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIA 120 TDSGFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIA Sbjct 61 TDSGFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIA 120 Query 121 VMWRWIVAPTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQ 180 VMWRWI+APTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQ Sbjct 121 VMWRWILAPTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQ 180 Query 181 DIHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTD 240 DIHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTD Sbjct 181 DIHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTD 240 Query 241 LVAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYELT 290 LVAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYELT Sbjct 241 LVAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYELT 290 >gi|289758440|ref|ZP_06517818.1| sugar-transport integral membrane protein ABC transporter UspA [Mycobacterium tuberculosis T85] gi|294994586|ref|ZP_06800277.1| putative sugar-transport integral membrane protein ABC transporter [Mycobacterium tuberculosis 210] gi|289714004|gb|EFD78016.1| sugar-transport integral membrane protein ABC transporter UspA [Mycobacterium tuberculosis T85] gi|326903932|gb|EGE50865.1| sugar-transport membrane protein ABC transporter uspA [Mycobacterium tuberculosis W-148] gi|339295220|gb|AEJ47331.1| putative sugar-transport integral membrane protein ABC transporter uspA [Mycobacterium tuberculosis CCDC5079] Length=290 Score = 558 bits (1437), Expect = 4e-157, Method: Compositional matrix adjust. Identities = 288/290 (99%), Positives = 289/290 (99%), Gaps = 0/290 (0%) Query 1 MRDAPRRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVL 60 MRDAPRRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVL Sbjct 1 MRDAPRRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVL 60 Query 61 TDSGFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIA 120 TDSGFA SLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIA Sbjct 61 TDSGFAHSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIA 120 Query 121 VMWRWIVAPTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQ 180 VMWRWI+APTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQ Sbjct 121 VMWRWILAPTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQ 180 Query 181 DIHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTD 240 DIHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTD Sbjct 181 DIHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTD 240 Query 241 LVAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYELT 290 LVAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYELT Sbjct 241 LVAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYELT 290 >gi|339298840|gb|AEJ50950.1| putative sugar-transport integral membrane protein ABC transporter uspA [Mycobacterium tuberculosis CCDC5180] Length=270 Score = 519 bits (1336), Expect = 2e-145, Method: Compositional matrix adjust. Identities = 267/270 (99%), Positives = 269/270 (99%), Gaps = 0/270 (0%) Query 21 VGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDSGFADSLVVTAVFVAIVV 80 +GVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDSGFA SLVVTAVFVAIVV Sbjct 1 MGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDSGFAHSLVVTAVFVAIVV 60 Query 81 PAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMWRWIVAPTDGAISTVLGH 140 PAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMWRWI+APTDGAISTVLGH Sbjct 61 PAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMWRWILAPTDGAISTVLGH 120 Query 141 RIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQDIHNAARTDGASAWQRFWRI 200 RIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQDIHNAARTDGASAWQRFWRI Sbjct 121 RIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQDIHNAARTDGASAWQRFWRI 180 Query 201 TLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDLVAHRIYAEAFGAAAIGRAS 260 TLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDLVAHRIYAEAFGAAAIGRAS Sbjct 181 TLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDLVAHRIYAEAFGAAAIGRAS 240 Query 261 VMAVVLFVILVGATVVQHLYFRRRISYELT 290 VMAVVLFVILVGATVVQHLYFRRRISYELT Sbjct 241 VMAVVLFVILVGATVVQHLYFRRRISYELT 270 >gi|118616957|ref|YP_905289.1| sugar-transport integral membrane protein ABC transporter UspA [Mycobacterium ulcerans Agy99] gi|183983596|ref|YP_001851887.1| sugar-transport integral membrane protein ABC transporter UspA [Mycobacterium marinum M] gi|118569067|gb|ABL03818.1| sugar-transport integral membrane protein ABC transporter UspA [Mycobacterium ulcerans Agy99] gi|183176922|gb|ACC42032.1| sugar-transport integral membrane protein ABC transporter UspA [Mycobacterium marinum M] Length=290 Score = 491 bits (1264), Expect = 5e-137, Method: Compositional matrix adjust. Identities = 247/290 (86%), Positives = 268/290 (93%), Gaps = 0/290 (0%) Query 1 MRDAPRRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVL 60 MR PRR TALAYALLAPSL GV+AFLLLPILVV+WLSL+RWDLLGPLRYVGL NWRSVL Sbjct 1 MRATPRRTTALAYALLAPSLFGVLAFLLLPILVVIWLSLYRWDLLGPLRYVGLANWRSVL 60 Query 61 TDSGFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIA 120 D F +SLVVTA+FVAIVVPAQTVLGLLAA +L RRLPGT FRTLYVLPWICAPLAIA Sbjct 61 RDGDFGNSLVVTAIFVAIVVPAQTVLGLLAAMMLTRRLPGTNFFRTLYVLPWICAPLAIA 120 Query 121 VMWRWIVAPTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQ 180 VMWRWI+APTDGAIST+LG RIEWLTDP LALPVV+AVV+WTNVGYVSL FLAGL+AIP Sbjct 121 VMWRWILAPTDGAISTLLGRRIEWLTDPDLALPVVAAVVIWTNVGYVSLSFLAGLLAIPD 180 Query 181 DIHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTD 240 DIH AARTDGA+AWQRFWRITLPMLRPT FFVLVTGI+SAAQ+FD VYALTGGGP+GST+ Sbjct 181 DIHAAARTDGANAWQRFWRITLPMLRPTTFFVLVTGIVSAAQIFDIVYALTGGGPEGSTE 240 Query 241 LVAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYELT 290 LVAH+IYAEAFG+AAIGRASVMAVVLFVIL+G T VQH+YFRRRISY+LT Sbjct 241 LVAHQIYAEAFGSAAIGRASVMAVVLFVILIGVTFVQHMYFRRRISYDLT 290 >gi|118465669|ref|YP_881305.1| ABC transporter permease [Mycobacterium avium 104] gi|118166956|gb|ABK67853.1| ABC transporter, permease protein UspA [Mycobacterium avium 104] Length=294 Score = 489 bits (1258), Expect = 3e-136, Method: Compositional matrix adjust. Identities = 246/289 (86%), Positives = 272/289 (95%), Gaps = 1/289 (0%) Query 2 RDAPRRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLT 61 R APR TAL YALLAPSL GV+AFLLLPILVV+WLSL RWDLLGPLR+VGL+NWRSVLT Sbjct 7 RVAPRS-TALGYALLAPSLFGVLAFLLLPILVVIWLSLCRWDLLGPLRFVGLSNWRSVLT 65 Query 62 DSGFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAV 121 D+GF +SL+VTAVFVA+VVPAQT LGLLAA++LARRLPGTGLFRT+YVLPWICAPLAIAV Sbjct 66 DAGFGNSLMVTAVFVAMVVPAQTALGLLAATMLARRLPGTGLFRTVYVLPWICAPLAIAV 125 Query 122 MWRWIVAPTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQD 181 +WRWI+APTDGA+S VLGH IEWL+DP ALP+VSAVVVWTNVGYVSL FLAGL+AIP+D Sbjct 126 LWRWILAPTDGAVSAVLGHSIEWLSDPSFALPLVSAVVVWTNVGYVSLSFLAGLLAIPED 185 Query 182 IHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDL 241 IH AARTDGA+AWQRFWRIT+PMLRPT FFVLVTGI+S+AQVFDTVYALTGGGP GSTDL Sbjct 186 IHAAARTDGANAWQRFWRITMPMLRPTTFFVLVTGIVSSAQVFDTVYALTGGGPAGSTDL 245 Query 242 VAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYELT 290 VAHRIYAEAFG+AAIGRASVMAVVLFVIL+G T+VQHLYFRRRISY+LT Sbjct 246 VAHRIYAEAFGSAAIGRASVMAVVLFVILIGVTLVQHLYFRRRISYDLT 294 >gi|41408188|ref|NP_961024.1| hypothetical protein MAP2090 [Mycobacterium avium subsp. paratuberculosis K-10] gi|254774808|ref|ZP_05216324.1| hypothetical protein MaviaA2_09075 [Mycobacterium avium subsp. avium ATCC 25291] gi|41396543|gb|AAS04407.1| UspA [Mycobacterium avium subsp. paratuberculosis K-10] gi|336461706|gb|EGO40568.1| permease component of ABC-type sugar transporter [Mycobacterium avium subsp. paratuberculosis S397] Length=294 Score = 486 bits (1252), Expect = 1e-135, Method: Compositional matrix adjust. Identities = 245/289 (85%), Positives = 271/289 (94%), Gaps = 1/289 (0%) Query 2 RDAPRRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLT 61 R APR TAL YALLAPSL GV+AFLLLPILVV+WLSL RWDLLGPLR+VGL+NWRSVLT Sbjct 7 RVAPRS-TALGYALLAPSLFGVLAFLLLPILVVIWLSLCRWDLLGPLRFVGLSNWRSVLT 65 Query 62 DSGFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAV 121 D+GF +SL+VTAVFVA+VVPAQT LGLLAA++LARRLPGTGLFRT+YVLPWICAPLAIAV Sbjct 66 DAGFGNSLMVTAVFVAMVVPAQTALGLLAATMLARRLPGTGLFRTVYVLPWICAPLAIAV 125 Query 122 MWRWIVAPTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQD 181 +WRWI+APTDGA+S VLGH IEWL+DP ALP+VSAVVVWTNVGYVSL FLAGL+AIP+D Sbjct 126 LWRWILAPTDGAVSAVLGHSIEWLSDPSFALPLVSAVVVWTNVGYVSLSFLAGLLAIPED 185 Query 182 IHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDL 241 IH AARTDGA+AWQRFWRIT+PMLRPT FFVLVTGI+S+AQVFDTVYALTGGGP G TDL Sbjct 186 IHAAARTDGANAWQRFWRITMPMLRPTTFFVLVTGIVSSAQVFDTVYALTGGGPAGRTDL 245 Query 242 VAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYELT 290 VAHRIYAEAFG+AAIGRASVMAVVLFVIL+G T+VQHLYFRRRISY+LT Sbjct 246 VAHRIYAEAFGSAAIGRASVMAVVLFVILIGVTLVQHLYFRRRISYDLT 294 >gi|296166354|ref|ZP_06848789.1| sugar ABC superfamily ATP binding cassette transporter, permease protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898264|gb|EFG77835.1| sugar ABC superfamily ATP binding cassette transporter, permease protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=294 Score = 486 bits (1251), Expect = 2e-135, Method: Compositional matrix adjust. Identities = 246/287 (86%), Positives = 265/287 (93%), Gaps = 0/287 (0%) Query 4 APRRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDS 63 A R TAL YALLAPSL GV+AFLLLPILVV+WLSL+RWDLLGPLRYVGL NWRSVLTD Sbjct 8 AQPRSTALGYALLAPSLFGVIAFLLLPILVVIWLSLYRWDLLGPLRYVGLANWRSVLTDR 67 Query 64 GFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMW 123 FA+SL+VTA+FVAIVVPAQTVLGLLAAS+LARRLPGTGLFRTLYVLPWICAPLAIAV+W Sbjct 68 NFANSLIVTALFVAIVVPAQTVLGLLAASMLARRLPGTGLFRTLYVLPWICAPLAIAVLW 127 Query 124 RWIVAPTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQDIH 183 RWI+APTDGA+ST+LGH I WL+DP ALP+VSAVVVWTNVGYVSL FLAGL+AIP DIH Sbjct 128 RWILAPTDGAVSTLLGHSINWLSDPSFALPLVSAVVVWTNVGYVSLSFLAGLLAIPDDIH 187 Query 184 NAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDLVA 243 AARTDGA+AWQRFWRITLPMLRPT FFVLVTGI+S AQVFD VYALTGGGP GSTDLVA Sbjct 188 AAARTDGATAWQRFWRITLPMLRPTTFFVLVTGIVSTAQVFDMVYALTGGGPAGSTDLVA 247 Query 244 HRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYELT 290 HRIYAEAF AAIGRASVMAVVLFVIL+G T+VQHLYFRRRISY+LT Sbjct 248 HRIYAEAFAGAAIGRASVMAVVLFVILIGVTMVQHLYFRRRISYDLT 294 >gi|240170963|ref|ZP_04749622.1| sugar-transport integral membrane protein ABC transporter UspA [Mycobacterium kansasii ATCC 12478] Length=290 Score = 485 bits (1249), Expect = 3e-135, Method: Compositional matrix adjust. Identities = 244/289 (85%), Positives = 268/289 (93%), Gaps = 0/289 (0%) Query 1 MRDAPRRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVL 60 MR PRR TALAYALLAPSL GV+AFLLLPILVVVWLSL+RWDLLGPLR+VGL NWRSVL Sbjct 1 MRATPRRPTALAYALLAPSLFGVLAFLLLPILVVVWLSLYRWDLLGPLRFVGLANWRSVL 60 Query 61 TDSGFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIA 120 TD+ F SLVVTA+FVAIVVPAQTVLGLLAA +LAR+LPGT FRTLYVLPW+CAPLAIA Sbjct 61 TDADFGSSLVVTAIFVAIVVPAQTVLGLLAAMMLARQLPGTNFFRTLYVLPWVCAPLAIA 120 Query 121 VMWRWIVAPTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQ 180 VMWRWI+APTDGA+S VLG R+EWL++P LALP+V+AVVVWTNVGYVSL FLAGL+AIP Sbjct 121 VMWRWILAPTDGAVSAVLGRRVEWLSNPDLALPLVAAVVVWTNVGYVSLSFLAGLLAIPD 180 Query 181 DIHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTD 240 DIH AARTDGA+AWQRFWRITLPMLRPT FFVLVTGI+SAAQ+FD VYALTGGGP+GSTD Sbjct 181 DIHAAARTDGATAWQRFWRITLPMLRPTTFFVLVTGIVSAAQIFDIVYALTGGGPEGSTD 240 Query 241 LVAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYEL 289 LVAH+IY+EAFG+AAIGRASVMAVVLFVILVG T VQHLYFRRRISY+L Sbjct 241 LVAHQIYSEAFGSAAIGRASVMAVVLFVILVGVTFVQHLYFRRRISYDL 289 >gi|254820665|ref|ZP_05225666.1| ABC transporter, permease protein UspA [Mycobacterium intracellulare ATCC 13950] Length=294 Score = 476 bits (1226), Expect = 1e-132, Method: Compositional matrix adjust. Identities = 238/284 (84%), Positives = 265/284 (94%), Gaps = 0/284 (0%) Query 7 RRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDSGFA 66 R TAL YALLAPSL GV+AFLLLPILVV+WLSL RWDLLGPLR+VGL+NWRSVLTD F Sbjct 11 RSTALGYALLAPSLFGVLAFLLLPILVVIWLSLCRWDLLGPLRFVGLSNWRSVLTDGTFG 70 Query 67 DSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMWRWI 126 +SL+VTA+FVAIVVPAQT LGLLAAS+LAR+L GTGLFRT++VLPWICAPLAIAV+WRWI Sbjct 71 NSLIVTAIFVAIVVPAQTALGLLAASMLARQLRGTGLFRTVFVLPWICAPLAIAVLWRWI 130 Query 127 VAPTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQDIHNAA 186 +APTDGA+STVLGH IEWL+DP ALP+VSAVVVWTNVGYVSL FLAGL+AIP ++H AA Sbjct 131 LAPTDGAVSTVLGHSIEWLSDPSFALPLVSAVVVWTNVGYVSLSFLAGLLAIPDEVHAAA 190 Query 187 RTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDLVAHRI 246 RTDGA+AWQRFWRIT+PMLRPT FFVLVTGI+S AQVFDTVYALTGGGP GSTDLVAHRI Sbjct 191 RTDGANAWQRFWRITIPMLRPTTFFVLVTGIVSTAQVFDTVYALTGGGPAGSTDLVAHRI 250 Query 247 YAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYELT 290 YAEAFG+AAIGRASVMAVVLFVIL+G T++QHLYFRRRISY+LT Sbjct 251 YAEAFGSAAIGRASVMAVVLFVILIGVTLLQHLYFRRRISYDLT 294 >gi|15827944|ref|NP_302207.1| sugar transport integral membrane protein [Mycobacterium leprae TN] gi|221230421|ref|YP_002503837.1| sugar transport integral membrane protein [Mycobacterium leprae Br4923] gi|13093497|emb|CAC30721.1| sugar transport integral membrane protein [Mycobacterium leprae] gi|219933528|emb|CAR71863.1| sugar transport integral membrane protein [Mycobacterium leprae Br4923] Length=328 Score = 473 bits (1217), Expect = 1e-131, Method: Compositional matrix adjust. Identities = 237/284 (84%), Positives = 260/284 (92%), Gaps = 0/284 (0%) Query 7 RRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDSGFA 66 R ALAYALLAPSL GVV FLLLPI+VV+WLSL RWDLLGPL YVGL NWRSVLTD FA Sbjct 45 RSIALAYALLAPSLFGVVTFLLLPIIVVIWLSLFRWDLLGPLHYVGLANWRSVLTDPNFA 104 Query 67 DSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMWRWI 126 +SL+VTAVFVAIVVP QT+LGLL A++LAR+LPGTG+FRTLYVLPWICAPLAIAV+WRW+ Sbjct 105 NSLIVTAVFVAIVVPTQTMLGLLIATMLARQLPGTGVFRTLYVLPWICAPLAIAVLWRWL 164 Query 127 VAPTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQDIHNAA 186 +APTDGA S VL HRIEWL+DP LALPVVSAVVVWTNVGYVSL FLAGL++IP+DI+ AA Sbjct 165 LAPTDGAFSMVLRHRIEWLSDPSLALPVVSAVVVWTNVGYVSLSFLAGLLSIPEDINAAA 224 Query 187 RTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDLVAHRI 246 RTDGA AWQRFWRITLPMLRPTMFFVLVTGI+S AQVFDTVYALT GGP+ TDLVAHRI Sbjct 225 RTDGADAWQRFWRITLPMLRPTMFFVLVTGIVSTAQVFDTVYALTDGGPKSRTDLVAHRI 284 Query 247 YAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYELT 290 YAEAFG+AAIGRASVMAV+LFV+L G TVVQHLYF+RRISYELT Sbjct 285 YAEAFGSAAIGRASVMAVLLFVVLFGVTVVQHLYFQRRISYELT 328 >gi|342857436|ref|ZP_08714092.1| ABC transporter permease [Mycobacterium colombiense CECT 3035] gi|342134769|gb|EGT87935.1| ABC transporter permease [Mycobacterium colombiense CECT 3035] Length=294 Score = 468 bits (1203), Expect = 6e-130, Method: Compositional matrix adjust. Identities = 236/290 (82%), Positives = 262/290 (91%), Gaps = 1/290 (0%) Query 1 MRDAPRRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVL 60 +R PR TAL YALLAPSL GV+AFLLLPILVV+WLSL RWDLLGPL +VGL+NWRSVL Sbjct 6 LRKQPRS-TALGYALLAPSLFGVLAFLLLPILVVLWLSLCRWDLLGPLHFVGLSNWRSVL 64 Query 61 TDSGFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIA 120 TD+GF +SL+VT FVAIVVPAQT LGLLAA++LAR+L GT LFRTL+VLPWICAPLAIA Sbjct 65 TDAGFGNSLIVTVAFVAIVVPAQTALGLLAATMLARQLRGTNLFRTLFVLPWICAPLAIA 124 Query 121 VMWRWIVAPTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQ 180 V+WRWI+APTDGA+ST LGH I WL+DP ALP+VSAVVVWTNVGYVSL FLAGL+AIP Sbjct 125 VLWRWILAPTDGAVSTALGHSIGWLSDPSFALPLVSAVVVWTNVGYVSLSFLAGLLAIPD 184 Query 181 DIHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTD 240 DI+ AARTDGA+ WQRFWRIT+PMLRPT FFVLVTGI+S AQVFD VYALTGGGP GSTD Sbjct 185 DIYAAARTDGATGWQRFWRITMPMLRPTTFFVLVTGIVSTAQVFDMVYALTGGGPAGSTD 244 Query 241 LVAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYELT 290 LVAHRIYAEAFG+A+IGRASVMAVVLFVIL+G TVVQHLYFRRRISY+LT Sbjct 245 LVAHRIYAEAFGSASIGRASVMAVVLFVILIGVTVVQHLYFRRRISYDLT 294 >gi|118471050|ref|YP_888739.1| ABC transporter permease [Mycobacterium smegmatis str. MC2 155] gi|118172337|gb|ABK73233.1| ABC transporter, permease protein UspA [Mycobacterium smegmatis str. MC2 155] Length=305 Score = 427 bits (1099), Expect = 7e-118, Method: Compositional matrix adjust. Identities = 237/287 (83%), Positives = 262/287 (92%), Gaps = 1/287 (0%) Query 5 PR-RRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDS 63 PR R TALAYAL+APSL GVV FLLLP+LVVVWLSLHRWDLLGP+ +VGL NW SVLTD Sbjct 19 PRVRTTALAYALVAPSLFGVVTFLLLPMLVVVWLSLHRWDLLGPIEFVGLDNWTSVLTDP 78 Query 64 GFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMW 123 F SLVVT +F+A+VVP QTVLGL+AA++LAR LPGTG FRT+YVLPWICAPLAIAV+W Sbjct 79 AFGKSLVVTLLFMALVVPTQTVLGLVAATMLARGLPGTGFFRTVYVLPWICAPLAIAVLW 138 Query 124 RWIVAPTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQDIH 183 RWI+APTDGA+STVLG RIEWLTDP LALPVVSAVVVWTNVGYV+LFFLAG++ IP D+H Sbjct 139 RWILAPTDGALSTVLGTRIEWLTDPSLALPVVSAVVVWTNVGYVTLFFLAGILNIPADLH 198 Query 184 NAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDLVA 243 NAARTDGA AWQRF ITLPMLRPTMFFVLVTGI+SAAQVFDTVYALT GGPQG TDL+A Sbjct 199 NAARTDGADAWQRFRHITLPMLRPTMFFVLVTGIVSAAQVFDTVYALTAGGPQGRTDLIA 258 Query 244 HRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYELT 290 HRIYAEAFGAAA+GRA+VMA+VLFV+LVG T+VQHLYFRRRISYELT Sbjct 259 HRIYAEAFGAAAVGRAAVMALVLFVLLVGVTIVQHLYFRRRISYELT 305 >gi|333990231|ref|YP_004522845.1| sugar-transport integral membrane protein ABC transporter UspA [Mycobacterium sp. JDM601] gi|333486199|gb|AEF35591.1| sugar-transport integral membrane protein ABC transporter UspA [Mycobacterium sp. JDM601] Length=268 Score = 407 bits (1047), Expect = 7e-112, Method: Compositional matrix adjust. Identities = 210/268 (79%), Positives = 237/268 (89%), Gaps = 0/268 (0%) Query 23 VVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDSGFADSLVVTAVFVAIVVPA 82 +VAFLLLP+LVVVWLSLHRWDLLGP+ YVG NWRSVLTD F +SL VT +FV IVVP Sbjct 1 MVAFLLLPMLVVVWLSLHRWDLLGPISYVGAENWRSVLTDPVFGNSLAVTVLFVVIVVPV 60 Query 83 QTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMWRWIVAPTDGAISTVLGHRI 142 QT LGL A LLAR LPG+G FRT+YVLPWICAPLAIAV+WRWI++PTDGA+STVLGHRI Sbjct 61 QTALGLAVAVLLARELPGSGAFRTIYVLPWICAPLAIAVLWRWILSPTDGAVSTVLGHRI 120 Query 143 EWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQDIHNAARTDGASAWQRFWRITL 202 EWLTDPGLALPV +AVVVWTNVGYV+LFFLAG++AIP + +AAR DGA+ WQRFWR+TL Sbjct 121 EWLTDPGLALPVTAAVVVWTNVGYVALFFLAGILAIPAQVLSAARIDGANGWQRFWRVTL 180 Query 203 PMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDLVAHRIYAEAFGAAAIGRASVM 262 PMLRPTMFFVLVTG++SAAQVFDTVYALTGGGP G TDL+AHRIY EAFGAAAIGRA+VM Sbjct 181 PMLRPTMFFVLVTGVVSAAQVFDTVYALTGGGPAGRTDLIAHRIYDEAFGAAAIGRAAVM 240 Query 263 AVVLFVILVGATVVQHLYFRRRISYELT 290 A+VLF +LVG TVVQ L RR+SY+LT Sbjct 241 ALVLFTVLVGVTVVQQLSLGRRVSYDLT 268 >gi|169628807|ref|YP_001702456.1| sugar ABC transporter permease [Mycobacterium abscessus ATCC 19977] gi|169240774|emb|CAM61802.1| Probable sugar ABC transporter, permease protein [Mycobacterium abscessus] Length=288 Score = 406 bits (1043), Expect = 2e-111, Method: Compositional matrix adjust. Identities = 206/283 (73%), Positives = 243/283 (86%), Gaps = 0/283 (0%) Query 7 RRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDSGFA 66 R+TA+AY LLAPSL GV AFLLLPILVVVWLSL RWDLLGP+ +VGL NWRSVLTD F Sbjct 5 RQTAVAYGLLAPSLFGVAAFLLLPILVVVWLSLCRWDLLGPIEFVGLDNWRSVLTDGTFG 64 Query 67 DSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMWRWI 126 SL+VT +FVA+V+P QT LGL AA+LL R LPGT LFRT+YV+PWICAPLAI V+W W+ Sbjct 65 HSLLVTLLFVALVIPVQTALGLAAATLLVRGLPGTVLFRTIYVIPWICAPLAIGVLWHWM 124 Query 127 VAPTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQDIHNAA 186 +APTDGA++ +LG R+EWLTDP LALPVV+AV VWTNVGYV+LFF+AGL+AIP D+HNAA Sbjct 125 LAPTDGAVNALLGQRVEWLTDPSLALPVVAAVSVWTNVGYVALFFMAGLLAIPGDVHNAA 184 Query 187 RTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDLVAHRI 246 R DGA+AWQRF RITLPMLRPT FFVLVTG++SA Q FDTVYALT GGPQ TDL AHR+ Sbjct 185 RVDGATAWQRFRRITLPMLRPTFFFVLVTGVVSAVQTFDTVYALTSGGPQNRTDLAAHRV 244 Query 247 YAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYEL 289 YAEAF AA +GR++ M+++LF+ILV TV+QH YFR R+SY+L Sbjct 245 YAEAFEAAHVGRSAAMSLILFLILVTITVIQHRYFRARVSYDL 287 >gi|317508437|ref|ZP_07966107.1| inner membrane transporter [Segniliparus rugosus ATCC BAA-974] gi|316253284|gb|EFV12684.1| inner membrane transporter [Segniliparus rugosus ATCC BAA-974] Length=298 Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 166/286 (59%), Positives = 218/286 (77%), Gaps = 0/286 (0%) Query 4 APRRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDS 63 AP ++ + +APSLVG+V+F+LLP+L V+WLS WDL+GP R+VGL NW++VL D Sbjct 12 APASQSPTGWLFVAPSLVGLVSFMLLPVLAVLWLSTQDWDLIGPSRFVGLQNWQAVLNDP 71 Query 64 GFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMW 123 F SL+VT F A+VVPAQT LGL A+LL + L G+ FRT+ +PW+CAPLAIA++W Sbjct 72 QFGHSLLVTLGFTAVVVPAQTALGLWVATLLTKGLRGSSAFRTILAVPWVCAPLAIALIW 131 Query 124 RWIVAPTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQDIH 183 +W+++PTDGA++ ++G R+EWLTDP LA P V+AV VW+ VGYV+LFF+AGL AIP+D+ Sbjct 132 KWLLSPTDGAVNALVGTRVEWLTDPSLAFPAVAAVSVWSQVGYVALFFVAGLYAIPEDLG 191 Query 184 NAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDLVA 243 AA DGA++ QRFW IT P+LRPT+ FV +TG+I+A Q+FD VY LTGGGP GSTDLVA Sbjct 192 QAAYLDGATSRQRFWLITFPLLRPTLVFVSLTGVINAVQIFDLVYGLTGGGPSGSTDLVA 251 Query 244 HRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYEL 289 HR+YAEAF A GRA+VMA+VL + LV TVV R+ +Y L Sbjct 252 HRLYAEAFEVARPGRAAVMAIVLALGLVLITVVTRRASERKEAYAL 297 >gi|229818647|ref|YP_002880173.1| binding-protein-dependent transport systems inner membrane component [Beutenbergia cavernae DSM 12333] gi|229564560|gb|ACQ78411.1| binding-protein-dependent transport systems inner membrane component [Beutenbergia cavernae DSM 12333] Length=292 Score = 319 bits (817), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 165/289 (58%), Positives = 215/289 (75%), Gaps = 4/289 (1%) Query 6 RRR--TALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDS 63 RRR TA AYALL PSL+GV FLL+P+++V+ +S RWDL+ P ++VGL N+ + Sbjct 4 RRRADTAAAYALLTPSLIGVGLFLLVPVVIVIGISFTRWDLVSPPQWVGLDNYVYIFGWP 63 Query 64 GFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMW 123 F +SL V+ +F A+ +P LGL+ A + RRLPGT R LYVLPW+CAPLA+ V+W Sbjct 64 TFRNSLWVSVLFTALTIPTTIALGLILAVAINRRLPGTNALRVLYVLPWVCAPLALGVVW 123 Query 124 RWIVAPTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQDIH 183 RWI PT+GA++ +LG R+EWLTD LALP V+ V VW++VGYVSLFFLAGL IP ++ Sbjct 124 RWIFDPTNGALNALLGRRVEWLTDLNLALPSVAFVQVWSSVGYVSLFFLAGLQQIPNQVY 183 Query 184 NAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGP--QGSTDL 241 AAR DGASA + W IT+P+LRPTMFFVLVT IIS+ QVFD++YA+T GGP G TD+ Sbjct 184 EAARLDGASAPRTLWSITVPLLRPTMFFVLVTSIISSFQVFDSIYAMTRGGPGVPGRTDV 243 Query 242 VAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYELT 290 +A RIY EAF A +GRA+ MAVVLF +LV T++Q YFRRRI+Y+++ Sbjct 244 IAARIYDEAFVALRLGRAAAMAVVLFAVLVTITLLQQRYFRRRITYDMS 292 >gi|296394332|ref|YP_003659216.1| binding-protein-dependent transporter inner membrane component [Segniliparus rotundus DSM 44985] gi|296181479|gb|ADG98385.1| binding-protein-dependent transport systems inner membrane component [Segniliparus rotundus DSM 44985] Length=292 Score = 317 bits (813), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 160/284 (57%), Positives = 208/284 (74%), Gaps = 0/284 (0%) Query 6 RRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDSGF 65 RR + + ++PS +G+ AF+L P L V+WLS WDL+GP R+VGL NWR+VLTD F Sbjct 8 RRSQLVGWLFVSPSAIGLGAFMLFPALAVLWLSTQDWDLIGPSRFVGLGNWRAVLTDPQF 67 Query 66 ADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMWRW 125 SL+VT F A+VVPAQT LGL A+LL + L G+ +FRT+ +PW+CAPLA+A++W+W Sbjct 68 GHSLLVTIGFTAVVVPAQTALGLWVATLLTKGLRGSSVFRTVLAVPWVCAPLALALIWKW 127 Query 126 IVAPTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQDIHNA 185 +++P DGAI+ + G EWLTDP LA P V+AV VW+ GYV+LFF+AGL AIP+++ A Sbjct 128 LLSPADGAINALTGSHAEWLTDPKLAFPAVAAVSVWSQTGYVALFFVAGLYAIPEELGQA 187 Query 186 ARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDLVAHR 245 A DGAS+ QRFWRITLP+LRPT+ FV +TG+I+A QVFD VY LT GGP GSTDLVAHR Sbjct 188 ACLDGASSRQRFWRITLPLLRPTLVFVSLTGVINAVQVFDLVYGLTRGGPNGSTDLVAHR 247 Query 246 IYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYEL 289 +Y+EAF A GRA+VMAVVL + L+ V R +Y L Sbjct 248 LYSEAFEVARPGRAAVMAVVLALGLMLIAVATRRVAESRAAYAL 291 >gi|227497645|ref|ZP_03927863.1| ABC superfamily ATP binding cassette transporter, membrane protein [Actinomyces urogenitalis DSM 15434] gi|226832916|gb|EEH65299.1| ABC superfamily ATP binding cassette transporter, membrane protein [Actinomyces urogenitalis DSM 15434] Length=315 Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 154/281 (55%), Positives = 206/281 (74%), Gaps = 0/281 (0%) Query 8 RTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDSGFAD 67 T Y L PS++GVV F+++P+ V+VWL++H+WDL+ RYVGL R VLTD+ F Sbjct 33 ETVTGYLFLTPSVLGVVLFMVVPVGVIVWLTVHQWDLIASPRYVGLEQVRQVLTDAAFLR 92 Query 68 SLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMWRWIV 127 SL VT VA+VVPAQ ++GL A++L + + GT LFRTL V+PWI +PLA+ V+W WI Sbjct 93 SLRVTLALVALVVPAQILVGLFLANMLTKGVRGTTLFRTLIVIPWISSPLALGVVWSWIF 152 Query 128 APTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQDIHNAAR 187 APT G +S V G R+E L P ALP V+ VV+W NVGY SLFF+AGL+++P+++ AA Sbjct 153 APTGGLLSAVAGTRLEILVSPTWALPAVAFVVLWNNVGYTSLFFIAGLLSVPRELIEAAY 212 Query 188 TDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDLVAHRIY 247 DGASA Q FWRI +P+LRPT FFV VT +I+A +FD VYALTGGGP G+T ++A+ IY Sbjct 213 VDGASARQVFWRIKVPLLRPTFFFVSVTSVIAAFNIFDHVYALTGGGPAGATKVLAYEIY 272 Query 248 AEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYE 288 EAF + +G+ASVMA+V+ +IL+ TV Q+LYFR R +YE Sbjct 273 EEAFVSWDVGKASVMALVMMLILLAITVAQNLYFRTRTTYE 313 >gi|257069937|ref|YP_003156192.1| carbohydrate ABC transporter membrane protein [Brachybacterium faecium DSM 4810] gi|256560755|gb|ACU86602.1| carbohydrate ABC transporter membrane protein [Brachybacterium faecium DSM 4810] Length=287 Score = 306 bits (783), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 146/284 (52%), Positives = 209/284 (74%), Gaps = 0/284 (0%) Query 7 RRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDSGFA 66 RR L + L+ PSL+GV AF++LP+++ +SL RWDLLG R++GL N+++++T Sbjct 4 RRPLLGWLLVGPSLIGVAAFMILPVVLAFVVSLFRWDLLGTRRFIGLENYQTLITGGALG 63 Query 67 DSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMWRWI 126 +SL+VT +F I VP +GLL A+ L R LPG+ + R L V+PW+CAPLA+ V+W+WI Sbjct 64 NSLLVTGIFTLISVPVSLAIGLLLATQLVRTLPGSAIVRVLVVIPWVCAPLALGVVWKWI 123 Query 127 VAPTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQDIHNAA 186 P+ GA++ +LG RIEWLTDP LALP V+ V +W NVGY+SLFF AGL IP I+ AA Sbjct 124 FQPSVGALNQILGVRIEWLTDPSLALPAVAFVAIWQNVGYISLFFQAGLTRIPDSIYEAA 183 Query 187 RTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDLVAHRI 246 R DGA+ WQ +T+P+LRPT FF+ VT ++++ QVFD V+ALTGGGPQ T+++A I Sbjct 184 RIDGAAPWQSMLYMTIPLLRPTTFFLAVTQVVASFQVFDMVFALTGGGPQHRTEVIASLI 243 Query 247 YAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYELT 290 Y EAF A+ +GRAS +AV+LF++LV T++Q +F +RI+Y+++ Sbjct 244 YNEAFVASRLGRASAVAVILFLLLVVITLIQQRWFSKRITYDMS 287 >gi|320094679|ref|ZP_08026436.1| sugar ABC superfamily ATP binding cassette transporter, membrane protein [Actinomyces sp. oral taxon 178 str. F0338] gi|319978389|gb|EFW09975.1| sugar ABC superfamily ATP binding cassette transporter, membrane protein [Actinomyces sp. oral taxon 178 str. F0338] Length=293 Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 159/283 (57%), Positives = 208/283 (74%), Gaps = 0/283 (0%) Query 7 RRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDSGFA 66 R T YALLAPSL+GVVAF+ +PILVVVWLS+H+WDL+G YVG SVL+D GF Sbjct 10 RDTLTGYALLAPSLLGVVAFMAVPILVVVWLSVHKWDLIGEPSYVGAPQIASVLSDPGFL 69 Query 67 DSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMWRWI 126 SL +TA+ V +VVPAQ VLGLL A+LL + + GT +FR L V+PWI PLA+ V+W WI Sbjct 70 SSLGITALLVVLVVPAQIVLGLLLANLLTKGVRGTTVFRALVVIPWIAPPLALGVVWSWI 129 Query 127 VAPTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQDIHNAA 186 APT G +S + G R+E L P ALP + VV+W NVGY +LFF+AGL++IP+++ AA Sbjct 130 FAPTGGLLSAIAGQRLEILVSPTWALPAAAFVVIWGNVGYTALFFIAGLLSIPKELVEAA 189 Query 187 RTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDLVAHRI 246 DGAS+ Q FWRI +P+LRPT FFV VT +IS +FD +YALT GGP G+T+++A++I Sbjct 190 TVDGASSSQIFWRIKMPLLRPTFFFVSVTSVISVFNLFDQIYALTKGGPDGATEVLAYKI 249 Query 247 YAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYEL 289 Y EAF +GRA+VMAVV+ +IL+ T+ Q+LYFR R +YE Sbjct 250 YQEAFETGNLGRAAVMAVVMMLILMAITLAQNLYFRSRTTYEF 292 >gi|315605843|ref|ZP_07880875.1| ABC superfamily ATP binding cassette transporter, membrane protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315312541|gb|EFU60626.1| ABC superfamily ATP binding cassette transporter, membrane protein [Actinomyces sp. oral taxon 180 str. F0310] Length=292 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 156/289 (54%), Positives = 212/289 (74%), Gaps = 1/289 (0%) Query 2 RDAPRRRTALA-YALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVL 60 + A R R ALA YA L+P+L+GV+ F+++PI V++W+SL+RWDL+G RYVGL N +VL Sbjct 3 KRASRTRHALAGYAFLSPALIGVLIFMVVPIGVIMWVSLYRWDLIGDTRYVGLANVTNVL 62 Query 61 TDSGFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIA 120 +D F SL T +FV +VVP Q +LGLL A+LL + + GT ++RTL V+PWI PLA+ Sbjct 63 SDPVFLSSLRTTILFVLLVVPIQIILGLLLANLLTKGVRGTVVYRTLIVIPWIAPPLALG 122 Query 121 VMWRWIVAPTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQ 180 V+W WI APT G +S + G R+E L P ALP + VVVW+NVGY +LFF+AGL+AIP+ Sbjct 123 VVWSWIFAPTGGLLSALAGTRLEILVSPTWALPAAAFVVVWSNVGYTALFFIAGLLAIPR 182 Query 181 DIHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTD 240 ++ AA DGAS+ Q FW I +P+LRPT FFV VT +IS VFD +YALT GGP GST+ Sbjct 183 ELTEAATVDGASSSQVFWHIKMPLLRPTFFFVSVTSVISVFNVFDQIYALTKGGPSGSTE 242 Query 241 LVAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYEL 289 ++A+ IY EAF +GRA+VMA V+ ++L+ T+ Q+LYFR+R +YEL Sbjct 243 VLAYLIYKEAFETGNVGRAAVMACVMMLLLMCLTLAQNLYFRKRTTYEL 291 >gi|154507910|ref|ZP_02043552.1| hypothetical protein ACTODO_00395 [Actinomyces odontolyticus ATCC 17982] gi|153797544|gb|EDN79964.1| hypothetical protein ACTODO_00395 [Actinomyces odontolyticus ATCC 17982] Length=292 Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 156/289 (54%), Positives = 212/289 (74%), Gaps = 1/289 (0%) Query 2 RDAPRRRTAL-AYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVL 60 + A R R AL YA L+P+L+GV+ F+++PI V++W+SL+RWDL+G RYVGL N +VL Sbjct 3 KRASRTRHALVGYAFLSPALIGVLIFMVVPIGVIMWVSLYRWDLIGDTRYVGLANVTNVL 62 Query 61 TDSGFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIA 120 +D F SL T +FV +VVP Q +LGLL A+LL + + GT ++RTL V+PWI PLA+ Sbjct 63 SDPSFLSSLRTTILFVLLVVPIQIILGLLLANLLTKGVRGTVVYRTLIVIPWIAPPLALG 122 Query 121 VMWRWIVAPTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQ 180 V+W WI APT G +S + G R+E L P ALP + VVVW+NVGY +LFF+AGL+AIP+ Sbjct 123 VVWSWIFAPTGGLLSALAGTRLEILVSPTWALPAAAFVVVWSNVGYTALFFIAGLLAIPR 182 Query 181 DIHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTD 240 ++ AA DGAS+ Q FW I +P+LRPT FFV VT +IS VFD +YALT GGP GST+ Sbjct 183 ELTEAATVDGASSSQVFWHIKMPLLRPTFFFVSVTSVISVFNVFDQIYALTKGGPSGSTE 242 Query 241 LVAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYEL 289 ++A+ IY EAF +GRA+VMA V+ ++L+G T+ Q+LYFR+R +YEL Sbjct 243 VLAYLIYKEAFETGNVGRAAVMACVMMLLLMGLTLAQNLYFRKRTTYEL 291 >gi|293190383|ref|ZP_06608815.1| glycerol-3-phosphate ABC transporter, permease protein [Actinomyces odontolyticus F0309] gi|292820967|gb|EFF79922.1| glycerol-3-phosphate ABC transporter, permease protein [Actinomyces odontolyticus F0309] Length=292 Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 156/289 (54%), Positives = 211/289 (74%), Gaps = 1/289 (0%) Query 2 RDAPRRRTAL-AYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVL 60 + A R R AL YA L+P+L+GV+ F+++PI V++W+SL+RWDL+G RYVGL N +VL Sbjct 3 KRASRTRHALVGYAFLSPALIGVLIFMVVPIGVIMWVSLYRWDLIGDTRYVGLANVTNVL 62 Query 61 TDSGFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIA 120 +D F SL T FV +VVP Q +LGLL A+LL + + GT ++RTL V+PWI PLA+ Sbjct 63 SDPSFLSSLRTTIFFVLLVVPIQIILGLLLANLLTKGVRGTVVYRTLIVIPWIAPPLALG 122 Query 121 VMWRWIVAPTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQ 180 V+W WI APT G +S + G R+E L P ALP + VVVW+NVGY +LFF+AGL+AIP+ Sbjct 123 VVWSWIFAPTGGLLSALAGTRLEILVSPTWALPAAAFVVVWSNVGYTALFFIAGLLAIPR 182 Query 181 DIHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTD 240 ++ AA DGAS+ Q FW I +P+LRPT FFV VT +IS VFD +YALT GGP GST+ Sbjct 183 ELTEAATVDGASSSQVFWHIKMPLLRPTFFFVSVTSVISVFNVFDQIYALTKGGPSGSTE 242 Query 241 LVAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYEL 289 ++A+ IY EAF +GRA+VMA V+ ++L+G T+ Q+LYFR+R +YEL Sbjct 243 VLAYLIYKEAFETGNVGRAAVMACVMMLLLMGLTLAQNLYFRKRTTYEL 291 >gi|269217704|ref|ZP_06161558.1| sn-Glycerol-3-phosphate transport system permease protein [Actinomyces sp. oral taxon 848 str. F0332] gi|269212639|gb|EEZ78979.1| sn-Glycerol-3-phosphate transport system permease protein [Actinomyces sp. oral taxon 848 str. F0332] Length=293 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 150/281 (54%), Positives = 199/281 (71%), Gaps = 4/281 (1%) Query 12 AYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDSGFADSLVV 71 A+A+L+PSLVGV FL+ PI ++ SL W+L+ P R+VGL N+ +L D GF S++V Sbjct 11 AFAMLSPSLVGVGLFLVAPIFFILLASLTDWNLISPPRFVGLDNYAHILGDPGFRRSILV 70 Query 72 TAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMWRWIVAPTD 131 TA F + +PA GLL A L R+LPG+G+F+ LYVLPW+CAPL + ++W+W++ P++ Sbjct 71 TAAFSLMAIPAAVTAGLLIAVALNRKLPGSGVFQVLYVLPWVCAPLTLGIVWKWLLDPSN 130 Query 132 GAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQDIHNAARTDGA 191 G ++ ++G R+EW++D LALP V+ V VW NVGY+SLFFLAGL AIPQ + AA+ DGA Sbjct 131 GLVNALVGDRVEWMSDASLALPTVAFVYVWQNVGYISLFFLAGLQAIPQSVVEAAKLDGA 190 Query 192 SAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGG---PQGSTDLVAHRIYA 248 + RI LPMLRPT FFVLVT IS+ Q FD VY LTGG P G+TD+VA +IY Sbjct 191 GPVRLLTRIRLPMLRPTTFFVLVTSFISSFQAFDLVYGLTGGNPGYPGGTTDVVAAQIYR 250 Query 249 EAFGAAA-IGRASVMAVVLFVILVGATVVQHLYFRRRISYE 288 AFGA IGRAS MAVVL V +V AT++Q +F +R YE Sbjct 251 TAFGAPNRIGRASAMAVVLLVFVVAATLIQQRHFSKRTVYE 291 >gi|258510794|ref|YP_003184228.1| binding-protein-dependent transport systems inner membrane component [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477520|gb|ACV57839.1| binding-protein-dependent transport systems inner membrane component [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length=312 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 125/288 (44%), Positives = 191/288 (67%), Gaps = 5/288 (1%) Query 7 RRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDSGFA 66 RR A YA + PS +GV+AFLL+P + V+ +SL W++L P ++VGL N+ + D Sbjct 26 RRLA-PYAFIFPSFIGVLAFLLVPAVAVLIISLFNWNMLSPPKFVGLRNYLDIFQDPLAL 84 Query 67 DSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMWRWI 126 S++VT +V + +P QTVL +L A LL RRLPG G+FR +VLPW+ P+AI+V+W I Sbjct 85 HSMLVTVYYVLLNIPVQTVLAILLALLLNRRLPGMGMFRAFFVLPWLAMPVAISVVWNLI 144 Query 127 VAPTDGAISTVLG----HRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQDI 182 PT+G ++ VL H +WL+ P ALP V+AV +W GY LFFLAGL +IP + Sbjct 145 FDPTNGVLNDVLTAVGLHPQQWLSSPVEALPCVAAVNIWQWTGYNMLFFLAGLQSIPSHL 204 Query 183 HNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDLV 242 + AA DGA ++F+ ITLP+LRPT+ FVL+T +I + QVFDTVY +T GGP +T++ Sbjct 205 YEAANIDGAGRLRKFFSITLPLLRPTLLFVLITSVIGSFQVFDTVYVMTQGGPGTATNVY 264 Query 243 AHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYELT 290 + I+ + F +G A+ ++V+LFV+++ T++Q + + +Y+++ Sbjct 265 NYYIFQQGFQFFHMGYAAALSVILFVVILLVTLIQFRFVGKGATYDMS 312 >gi|218288472|ref|ZP_03492762.1| binding-protein-dependent transport systems inner membrane component [Alicyclobacillus acidocaldarius LAA1] gi|218241445|gb|EED08619.1| binding-protein-dependent transport systems inner membrane component [Alicyclobacillus acidocaldarius LAA1] Length=309 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 125/288 (44%), Positives = 191/288 (67%), Gaps = 5/288 (1%) Query 7 RRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDSGFA 66 RR A YA + PS +GV+AFLL+P + V+ +SL W++L P ++VGL N+ + D Sbjct 23 RRLA-PYAFIFPSFIGVLAFLLVPAVAVLIISLFNWNMLSPPKFVGLRNYLDIFQDPLAL 81 Query 67 DSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMWRWI 126 S++VT +V + +P QTVL +L A LL RRLPG G+FR +VLPW+ P+AI+V+W I Sbjct 82 HSMLVTVYYVLLNIPVQTVLAILLALLLNRRLPGMGMFRAFFVLPWLAMPVAISVVWNLI 141 Query 127 VAPTDGAISTVLG----HRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQDI 182 PT+G ++ VL H +WL+ P ALP V+AV +W GY LFFLAGL +IP + Sbjct 142 FDPTNGVLNDVLTAVGLHPQQWLSSPVEALPCVAAVNIWQWTGYNMLFFLAGLQSIPSHL 201 Query 183 HNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDLV 242 + AA DGA ++F+ ITLP+LRPT+ FVL+T +I + QVFDTVY +T GGP +T++ Sbjct 202 YEAANIDGAGRLRKFFSITLPLLRPTLLFVLITSVIGSFQVFDTVYVMTQGGPGTATNVY 261 Query 243 AHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYELT 290 + I+ + F +G A+ ++V+LFV+++ T++Q + + +Y+++ Sbjct 262 NYYIFQQGFQFFHMGYAAALSVILFVVILLVTLIQFRFVGKGATYDMS 309 >gi|293572837|ref|ZP_06683790.1| ABC transporter, permease protein [Enterococcus faecium E980] gi|291607084|gb|EFF36453.1| ABC transporter, permease protein [Enterococcus faecium E980] Length=298 Score = 209 bits (531), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 110/283 (39%), Positives = 171/283 (61%), Gaps = 4/283 (1%) Query 6 RRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDSGF 65 R+RT +AY+ +AP+ +G F L+PIL + L+ +WD + GL N+R + D F Sbjct 15 RKRTWIAYSFIAPNFIGFFVFTLIPILFSLVLAFMKWDSFSTPEFAGLDNFRKMANDETF 74 Query 66 ADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMWRW 125 SL T ++ A VVP V L A LL +++ G LFRT++ P++ + +AIAV+W Sbjct 75 WISLKNTFLYTAAVVPGTLVCSLGLALLLNQKIRGMKLFRTIFFFPYVTSLVAIAVVWNM 134 Query 126 IVAPTDGAISTVLGHRIE----WLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQD 181 + PT G I+ L IE W + AL + V +W +GY + +LAGL +I ++ Sbjct 135 LFHPTMGPINIFLKRFIEHPPGWTSSSNWALWAIVIVSIWRGMGYYMILYLAGLQSIQKE 194 Query 182 IHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDL 241 ++ A+ DGA+ W++F +TLP LRPT FFV + +I+ +VFD V +T GGP +T++ Sbjct 195 LYEASSLDGANRWKQFLNVTLPSLRPTTFFVTIMLVINCFKVFDLVQVMTDGGPGRATNV 254 Query 242 VAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRR 284 + ++IY EAF G AS +++VLFVI++G TVVQ + +RR Sbjct 255 LVYQIYNEAFKKFDFGYASAISLVLFVIVLGVTVVQFSWNKRR 297 >gi|257886996|ref|ZP_05666649.1| ABC transporter [Enterococcus faecium 1,141,733] gi|257823050|gb|EEV49982.1| ABC transporter [Enterococcus faecium 1,141,733] Length=321 Score = 208 bits (530), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 110/283 (39%), Positives = 172/283 (61%), Gaps = 4/283 (1%) Query 6 RRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDSGF 65 R+RT +AY+ +AP+ +G F L+PIL + L+ +WD + GL N+R + D F Sbjct 38 RKRTWIAYSFIAPNFIGFFVFTLIPILFSLVLAFMKWDSFSTPEFAGLDNFRKMANDETF 97 Query 66 ADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMWRW 125 SL T ++ A VVP V L A LL +++ G LFRT++ P++ + +AIAV+W Sbjct 98 WISLKNTFLYTAAVVPGTLVCSLGLALLLNQKIRGMKLFRTIFFFPYVTSLVAIAVVWNM 157 Query 126 IVAPTDGAISTVLGHRIE----WLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQD 181 + PT G I+ L IE W ++ AL + V +W +GY + +LAGL +I ++ Sbjct 158 LFHPTMGPINIFLRRFIEHPPGWTSNSNWALWAIVIVSIWRGMGYYMILYLAGLQSIQKE 217 Query 182 IHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDL 241 ++ A+ DGA+ W++F +TLP LRPT FFV + +I+ +VFD V +T GGP +T++ Sbjct 218 LYEASSLDGANRWKQFLDVTLPSLRPTTFFVTIMLVINCFKVFDLVQVMTDGGPGRATNV 277 Query 242 VAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRR 284 + ++IY EAF G AS +++VLFVI++G TVVQ + +RR Sbjct 278 LVYQIYNEAFKKFDFGYASAISLVLFVIVLGVTVVQFSWNKRR 320 >gi|257884203|ref|ZP_05663856.1| ABC transporter [Enterococcus faecium 1,231,501] gi|257820041|gb|EEV47189.1| ABC transporter [Enterococcus faecium 1,231,501] Length=321 Score = 208 bits (529), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 110/283 (39%), Positives = 171/283 (61%), Gaps = 4/283 (1%) Query 6 RRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDSGF 65 R+RT +AY+ +AP+ +G F L+PIL + L+ +WD + GL N+R + D F Sbjct 38 RKRTWIAYSFIAPNFIGFFVFTLIPILFSLVLAFMKWDSFSTPEFAGLDNFRKMANDETF 97 Query 66 ADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMWRW 125 SL T ++ A VVP V L A LL +++ G LFRT++ P++ + +AIAV+W Sbjct 98 WISLKNTFLYTAAVVPGTLVCSLGLALLLNQKIRGMKLFRTIFFFPYVTSLVAIAVVWNM 157 Query 126 IVAPTDGAISTVLGHRIE----WLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQD 181 + PT G I+ L IE W + AL + V +W +GY + +LAGL +I ++ Sbjct 158 LFHPTMGPINIFLRRFIEHPPGWTSSSNWALWAIVIVSIWRGMGYYMILYLAGLQSIQKE 217 Query 182 IHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDL 241 ++ A+ DGA+ W++F +TLP LRPT FFV + +I+ +VFD V +T GGP +T++ Sbjct 218 LYEASSLDGANRWKQFLNVTLPSLRPTTFFVTIMLVINCFKVFDLVQVMTDGGPGRATNV 277 Query 242 VAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRR 284 + ++IY EAF G AS +++VLFVI++G TVVQ + +RR Sbjct 278 LVYQIYNEAFKKFDFGYASAISLVLFVIVLGVTVVQFSWNKRR 320 >gi|293567478|ref|ZP_06678825.1| ABC transporter, permease protein [Enterococcus faecium E1071] gi|291589875|gb|EFF21676.1| ABC transporter, permease protein [Enterococcus faecium E1071] Length=298 Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 110/283 (39%), Positives = 171/283 (61%), Gaps = 4/283 (1%) Query 6 RRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDSGF 65 R+RT +AY+ +AP+ +G F L+PIL + L+ +WD + GL N+R + D F Sbjct 15 RKRTWIAYSFIAPNFIGFFVFTLIPILFSLVLAFMKWDSFSTPEFAGLDNFRKMANDETF 74 Query 66 ADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMWRW 125 SL T ++ A VVP V L A LL +++ G LFRT++ P++ + +AIAV+W Sbjct 75 WISLKNTFLYTAAVVPGTLVCSLGLALLLNQKIRGMKLFRTIFFFPYVTSLVAIAVVWNM 134 Query 126 IVAPTDGAISTVLGHRIE----WLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQD 181 + PT G I+ L IE W + AL + V +W +GY + +LAGL +I ++ Sbjct 135 LFHPTVGPINIFLRRFIEHPPGWTSSSNWALWAIVIVSIWRGMGYYMILYLAGLQSIQKE 194 Query 182 IHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDL 241 ++ A+ DGA+ W++F +TLP LRPT FFV + +I+ +VFD V +T GGP +T++ Sbjct 195 LYEASSLDGANRWKQFLNVTLPSLRPTTFFVTIMLVINCFKVFDLVQVMTDGGPGRATNV 254 Query 242 VAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRR 284 + ++IY EAF G AS +++VLFVI++G TVVQ + +RR Sbjct 255 LVYQIYNEAFKKFDFGYASAISLVLFVIVLGVTVVQFSWNKRR 297 >gi|257898151|ref|ZP_05677804.1| ABC transporter [Enterococcus faecium Com15] gi|257836063|gb|EEV61137.1| ABC transporter [Enterococcus faecium Com15] Length=321 Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 109/283 (39%), Positives = 171/283 (61%), Gaps = 4/283 (1%) Query 6 RRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDSGF 65 R+RT +AY+ +AP+ +G F L+PIL + L+ +WD + GL N+R + D F Sbjct 38 RKRTWIAYSFIAPNFIGFFVFTLIPILFSLVLAFMKWDSFSTPEFAGLDNFRKMANDETF 97 Query 66 ADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMWRW 125 SL T ++ A VVP V L A LL +++ G LFRT++ P++ + +AIAV+W Sbjct 98 WISLKNTFLYTAAVVPGTLVCSLGLALLLNQKIRGMKLFRTIFFFPYVTSLVAIAVVWNM 157 Query 126 IVAPTDGAISTVLGHRIE----WLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQD 181 + PT G I+ L IE W + AL + V +W +GY + +LAGL ++ ++ Sbjct 158 LFHPTMGPINIFLRRFIEHPPGWTSSSNWALWAIVIVSIWRGMGYYMILYLAGLQSVQKE 217 Query 182 IHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDL 241 ++ A+ DGA+ W++F +TLP LRPT FFV + +I+ +VFD V +T GGP +T++ Sbjct 218 LYEASSLDGANRWKQFLNVTLPSLRPTTFFVTIMLVINCFKVFDLVQVMTDGGPGRATNV 277 Query 242 VAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRR 284 + ++IY EAF G AS +++VLFVI++G TVVQ + +RR Sbjct 278 LVYQIYNEAFKKFDFGYASAISLVLFVIVLGVTVVQFSWNKRR 320 >gi|284029861|ref|YP_003379792.1| binding-protein-dependent transport systems inner membrane component [Kribbella flavida DSM 17836] gi|283809154|gb|ADB30993.1| binding-protein-dependent transport systems inner membrane component [Kribbella flavida DSM 17836] Length=307 Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 120/301 (40%), Positives = 179/301 (60%), Gaps = 15/301 (4%) Query 2 RDAPRRRTA---------LAYAL--LAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRY 50 RD RR TA L + L L PS + + F L+P++ +W+SLHRW+L+ P+ + Sbjct 6 RDGARRTTANRRPRSWKNLGWVLFFLLPSAIPLFVFTLVPMVSSLWVSLHRWNLISPMEW 65 Query 51 VGLTNWRSVLTDSGFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVL 110 VGL N+ ++LTD + T +VA +P GLL A L ++L G R Y L Sbjct 66 VGLGNYTNLLTDPMTRRVFLHTLAYVAGYLPIVYAGGLLLALALNQKLKGRAFLRATYFL 125 Query 111 PWICAPLAIAVMWRWIVAPTDGAISTVLGH----RIEWLTDPGLALPVVSAVVVWTNVGY 166 P + + + +A++W+W++ PT+G ++ +LG W TDP ALP V W ++G+ Sbjct 126 PVVTSWVVVALVWKWLLNPTNGLVNQLLGAVGLPEPGWWTDPAWALPAVILSSAWKDLGF 185 Query 167 VSLFFLAGLMAIPQDIHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDT 226 V + LAGL ++P D + AA+ DGA+AWQRFWRITLP+L P+ FFV+V +I+ QVFD Sbjct 186 VMVILLAGLQSVPGDYYEAAKVDGANAWQRFWRITLPLLSPSTFFVVVISLINGFQVFDQ 245 Query 227 VYALTGGGPQGSTDLVAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRIS 286 VY +TGGGP GS+ +V +IY F G AS ++ +LF +++ TVVQ R+ + Sbjct 246 VYVMTGGGPAGSSQVVVGQIYDLTFRYGRAGEASALSWLLFALILVITVVQIRGQRKWVH 305 Query 287 Y 287 Y Sbjct 306 Y 306 >gi|119718851|ref|YP_925816.1| binding-protein-dependent transport systems inner membrane component [Nocardioides sp. JS614] gi|119539512|gb|ABL84129.1| carbohydrate ABC transporter membrane protein 1, CUT1 family [Nocardioides sp. JS614] Length=292 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 113/291 (39%), Positives = 170/291 (59%), Gaps = 4/291 (1%) Query 1 MRDAPRRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVL 60 M R LAPS V +V F +P++ W+SLH W+L+ P+R+VGL N+R +L Sbjct 1 MHGGRWRTLGWVVVFLAPSAVPLVLFTAVPMVSSAWVSLHEWNLISPMRWVGLDNYRELL 60 Query 61 TDSGFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIA 120 TD + T ++VA +P V GL A+ L RR+P FR Y LP + + + +A Sbjct 61 TDPATREVFWHTLLYVAGYLPLVYVGGLGLATALNRRMPANAFFRAAYFLPVVTSWVVVA 120 Query 121 VMWRWIVAPTDGAISTVLG----HRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLM 176 ++W+W++ P G ++ +LG + W TDP ALP V W ++G+V + LAGL Sbjct 121 LVWKWLLNPGGGLVNALLGAAGLGQPGWWTDPAWALPSVIVASAWKDLGFVMVILLAGLQ 180 Query 177 AIPQDIHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQ 236 +IP D+ AA DGA+ W+RF +TLP+L P+ FFV+V +I+ QVFD V+ +TGGGP Sbjct 181 SIPGDVLEAADVDGATGWRRFLHVTLPLLSPSTFFVVVISLINGFQVFDQVFVMTGGGPA 240 Query 237 GSTDLVAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISY 287 GS+ +V +IY F G AS ++ +LFV+++ T VQ RR + + Sbjct 241 GSSQVVVGQIYDLTFRYGRAGEASALSWLLFVVILAITAVQIRGQRRWVHH 291 >gi|255974342|ref|ZP_05424928.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|307278171|ref|ZP_07559253.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|255967214|gb|EET97836.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|306505160|gb|EFM74348.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] Length=290 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 103/286 (37%), Positives = 179/286 (63%), Gaps = 6/286 (2%) Query 6 RRRTALAYAL-LAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDSG 64 ++ AL +L L PSL+G + F++ P+ + +S WDL+ P+++VG+ N++S++ DS Sbjct 5 KKNNALWISLFLLPSLMGFLVFIIYPVFYSLGVSFTDWDLINPMKFVGIKNYQSLVNDST 64 Query 65 FADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMWR 124 F +SL T +F+ +P+ ++GLL A LL +L +FR +Y LP + + +A++++W+ Sbjct 65 FWNSLKNTFLFIIGYLPSVMIIGLLVALLLNSKLCLKPVFRGVYFLPVVTSWVAVSLVWK 124 Query 125 WIVAPTDGAIS---TVLG-HRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQ 180 W+ P G I+ T++G H WL DP A+ + VW ++G++ + +L GL I Sbjct 125 WLFNPKYGLINYFLTMIGLHGPNWLNDPKTAMLAIIITSVWKDIGFIMVLYLGGLQNISV 184 Query 181 DIHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTD 240 ++ AA DGA W +FW+ITLPML+ T FFV + +I++ QVFD V +T GGP +T Sbjct 185 SLYEAADIDGADKWHQFWKITLPMLKQTTFFVSMISLINSFQVFDQVNIMTAGGPGDATT 244 Query 241 LVAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRIS 286 ++ IY AF + +G A+ M+ +LF+I++ +VVQ ++ R+++ Sbjct 245 VLVQNIYNSAFKYSEMGYAAAMSWILFLIILVVSVVQ-MWGERKLT 289 >gi|294614267|ref|ZP_06694186.1| ABC transporter, permease protein [Enterococcus faecium E1636] gi|291592926|gb|EFF24516.1| ABC transporter, permease protein [Enterococcus faecium E1636] Length=295 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 109/283 (39%), Positives = 170/283 (61%), Gaps = 7/283 (2%) Query 6 RRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDSGF 65 R+RT +AY+ +AP+ +G F L+PIL + L+ +WD + GL N+R + D F Sbjct 15 RKRTWIAYSFIAPNFIGFFVFTLIPILFSLVLAFMKWDSFSTPEFAGLDNFRKMANDETF 74 Query 66 ADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMWRW 125 SL T ++ A VVP V L A LL +++ G LFRT++ P++ + +AIAV+W Sbjct 75 WISLKNTFLYTAAVVPGTLVCSLGLALLLNQKIRGMKLFRTIFFFPYVTSLVAIAVVWNM 134 Query 126 IVAPTDGAISTVLGHRIE----WLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQD 181 + PT G I+ L IE W + AL + V +W +G + +LAGL +I ++ Sbjct 135 LFHPTVGPINIFLRRFIEHPPGWTSSSNWALWAIVIVSIWRGMG---ILYLAGLQSIQKE 191 Query 182 IHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDL 241 ++ A+ DGA+ W++F +TLP LRPT FFV + +I+ +VFD V +T GGP +T++ Sbjct 192 LYEASSLDGANRWKQFLNVTLPSLRPTTFFVTIMLVINCFKVFDLVQVMTDGGPGRATNV 251 Query 242 VAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRR 284 + ++IY EAF G AS +++VLFVI++G TVVQ + +RR Sbjct 252 LVYQIYNEAFKKFDFGYASAISLVLFVIVLGVTVVQFSWNKRR 294 >gi|302556095|ref|ZP_07308437.1| binding-protein-dependent transport system inner membrane component [Streptomyces viridochromogenes DSM 40736] gi|302473713|gb|EFL36806.1| binding-protein-dependent transport system inner membrane component [Streptomyces viridochromogenes DSM 40736] Length=321 Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 118/291 (41%), Positives = 173/291 (60%), Gaps = 15/291 (5%) Query 2 RDAPR-RRTA---------LAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYV 51 R PR RRT LA +AP+L+G + FLL P L ++LS R++LL P ++V Sbjct 21 RSKPRTRRTEVGETRGDGRLAAVFIAPALLGFLVFLLWPTLRGIYLSFTRFNLLTPAKWV 80 Query 52 GLTNWRSVLTDSGFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLP 111 GL N+ ++ D F DSL VT +V I + QTV LA ++L +RL + + R + + P Sbjct 81 GLDNYVRMVNDPIFWDSLKVTVEYVVINIGVQTV-SALAIAVLLQRLTQSAMLRGIVLTP 139 Query 112 WICAPLAIAVMWRWIVAPTDGA----ISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYV 167 ++ + + ++W WI+ G IS + RI +L D A+P ++ + VW +VGY Sbjct 140 YLMSNVVAGLVWLWILDTQLGIGNEIISALGADRIPFLADETWAIPTIALINVWRHVGYT 199 Query 168 SLFFLAGLMAIPQDIHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTV 227 +L AGL AIP D++ AAR DGAS W+ FWRIT+P+LRP + VL+ +I + QVFDTV Sbjct 200 ALLLFAGLQAIPNDMYEAARVDGASEWRMFWRITMPLLRPVLAVVLIMTVIGSFQVFDTV 259 Query 228 YALTGGGPQGSTDLVAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQH 278 T GGP +T+++ + IY AFG G AS M+V L V+L TV+Q+ Sbjct 260 AVTTAGGPANATNVLQYYIYGSAFGRFQFGYASAMSVALLVVLSAITVLQY 310 >gi|325567135|ref|ZP_08143802.1| ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] gi|325158568|gb|EGC70714.1| ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] Length=300 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 105/283 (38%), Positives = 166/283 (59%), Gaps = 4/283 (1%) Query 6 RRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDSGF 65 R+ T A + +AP+ +G F L+P++ + L+ WD +VG+ N+ +L D F Sbjct 15 RKNTLTALSFIAPNFIGFFLFTLVPVVFSLILAFMEWDSFSSPEFVGMKNFSKMLGDDTF 74 Query 66 ADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMWRW 125 SL T ++ VVP V L A LL +++ G FRT + P++ + +AIAV+W Sbjct 75 WISLKNTFLYTIGVVPLTLVCSLGLAILLNKKVRGMKFFRTAFFFPYVTSLVAIAVVWNM 134 Query 126 IVAPTDGAISTVLGHRIE----WLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQD 181 + PT G I+ L IE W + AL + V VW +GY + +LAGL ++P++ Sbjct 135 LFHPTMGPINQFLKFFIENPPGWTSSSDWALTAIIIVSVWRGMGYYMILYLAGLQSVPKE 194 Query 182 IHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDL 241 ++ AA DGA+ WQ+F +TLP LRPT FFV + +I+ ++FD V +T GGP +T++ Sbjct 195 LYEAASIDGANKWQQFRNVTLPSLRPTTFFVSIMLVINCFKIFDLVQVMTAGGPGRATNV 254 Query 242 VAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRR 284 + ++IY EAF G AS +A+VLFVI++G TV+Q + +R+ Sbjct 255 LVYQIYNEAFVKFNFGYASAIAMVLFVIVLGITVIQFKWNQRQ 297 >gi|269925946|ref|YP_003322569.1| binding-protein-dependent transport systems inner membrane component [Thermobaculum terrenum ATCC BAA-798] gi|269789606|gb|ACZ41747.1| binding-protein-dependent transport systems inner membrane component [Thermobaculum terrenum ATCC BAA-798] Length=309 Score = 195 bits (495), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 108/288 (38%), Positives = 168/288 (59%), Gaps = 7/288 (2%) Query 7 RRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLR-YVGLTNWRSVLTDSGF 65 RR AY L+P L+ F + + +LS H+W++L P + +VG+ N+R +L D F Sbjct 22 RREWTAYLFLSPGLILFAVFTVFSVGFSFYLSFHQWNILEPQKPFVGMQNYRELLHDRYF 81 Query 66 ADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMWRW 125 ++V T F A+ VP +GLL A +L ++ GLFRTLY LP + + + A++W+W Sbjct 82 LGAIVNTLYFAAVSVPVTMAIGLLVALMLNTQIRFRGLFRTLYYLPGVTSLVVAAIIWKW 141 Query 126 IVAPTDGAIS------TVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIP 179 + + G ++ ++ I WL+D LA+P V V VW VG+ + +LA L +IP Sbjct 142 VFSGDYGLLNYYLLKLHIIDKPILWLSDRNLAMPAVITVSVWQGVGFHMVVYLAALQSIP 201 Query 180 QDIHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGST 239 Q+I++AA+ DGASA++R IT+P+LRPTMFF V +I + QVF + +TGGGP T Sbjct 202 QEIYDAAKVDGASAFRRLIYITVPLLRPTMFFQFVVAMIGSLQVFGQILLMTGGGPIRRT 261 Query 240 DLVAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISY 287 VA +Y +AF +G A+ +A LF +++ T++ R I Y Sbjct 262 TTVAFYLYQKAFRDFEMGYAAAIAYCLFAMMIVFTIIYWRLAYREIEY 309 >gi|251794681|ref|YP_003009412.1| binding-protein-dependent transporters inner membrane component [Paenibacillus sp. JDR-2] gi|247542307|gb|ACS99325.1| binding-protein-dependent transport systems inner membrane component [Paenibacillus sp. JDR-2] Length=294 Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 110/291 (38%), Positives = 162/291 (56%), Gaps = 5/291 (1%) Query 3 DAPRRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTD 62 A RR Y L P+++G + F+ P+ +S W+ G +++ G +N+ + +D Sbjct 4 KALRRNRLTGYTFLLPNILGFLIFICFPVCASFLISFTEWNGFGEIKFTGFSNYARLWSD 63 Query 63 SGFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVM 122 F SL+ + V A+ VP +L +LAA L R + G LFRT LP I A +A+AV+ Sbjct 64 DTFRISLINSLVMTAVSVPVTLMLAILAAVALNRGIKGVKLFRTAIFLPHITATIAVAVV 123 Query 123 WRWIVAPTDGAISTVL-----GHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMA 177 W+ + PT G I+ L H WL AL V V +W ++GY + +LAGL Sbjct 124 WQLLYNPTMGPINGFLRSLGIAHPPAWLASTQWALISVIIVSIWHSIGYYMVLYLAGLQG 183 Query 178 IPQDIHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQG 237 IP+D++ AA DGA +F ITLPML P +FF ++ GII++ +VFD VY LT GGP Sbjct 184 IPKDLYEAAEIDGAGKVSQFRNITLPMLSPVIFFTVIMGIINSFKVFDLVYVLTKGGPGR 243 Query 238 STDLVAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYE 288 ST ++ + IY AF G AS MA VLF I++ T++Q +R ++Y Sbjct 244 STHMLVYDIYDTAFKRYEYGYASAMAYVLFAIILVITLIQFRGQKRWVNYS 294 >gi|297204347|ref|ZP_06921744.1| binding-protein-dependent transport system inner membrane component [Streptomyces sviceus ATCC 29083] gi|197716849|gb|EDY60883.1| binding-protein-dependent transport system inner membrane component [Streptomyces sviceus ATCC 29083] Length=321 Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 112/272 (42%), Positives = 166/272 (62%), Gaps = 5/272 (1%) Query 11 LAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDSGFADSLV 70 LA +AP+LVG V FLL P L ++LS R++LL P +VGL N+ ++ D F +SL Sbjct 40 LAAVFIAPALVGFVVFLLWPTLRGIYLSFTRFNLLTPAEWVGLANYDRMIHDPIFWESLK 99 Query 71 VTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMWRWIVAPT 130 VT +V I + QTV LA ++L +RL + L R + + P++ + + ++W WI+ Sbjct 100 VTVEYVVINIGVQTV-SALAIAVLLQRLTQSPLLRGIVLTPYLMSNVVAGLVWLWILDNQ 158 Query 131 DGAISTVLG----HRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQDIHNAA 186 G + ++ RI +L D A+P ++ + VW +VGY +L AGLMAIP D++ AA Sbjct 159 LGIGNEIIAGLGFDRIPFLADETWAIPTIALINVWRHVGYTALLLFAGLMAIPNDMYEAA 218 Query 187 RTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDLVAHRI 246 + DGAS W+ FWRIT+P+LRP + VL+ +I + QVFDTV T GGP +T+++ I Sbjct 219 KVDGASEWRMFWRITMPLLRPVLAVVLIMTVIGSFQVFDTVAVTTAGGPANATNVLQFYI 278 Query 247 YAEAFGAAAIGRASVMAVVLFVILVGATVVQH 278 Y AFG G AS M+V L V+L TV+Q+ Sbjct 279 YQSAFGRFQFGYASAMSVALLVVLSAITVLQY 310 >gi|315576589|gb|EFU88780.1| ABC transporter, permease protein [Enterococcus faecalis TX0630] Length=300 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 103/276 (38%), Positives = 159/276 (58%), Gaps = 4/276 (1%) Query 6 RRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDSGF 65 R+ T A + +AP+ +G F L+P++ + L+ WD +VG+ N+ ++ D F Sbjct 15 RKNTWTALSFIAPNFIGFFLFTLIPVICSLILAFMSWDSFSTPEFVGMKNFTKMIHDDTF 74 Query 66 ADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMWRW 125 SL T ++ VVP + L A LL R++ G FRT + P++ + +AIAV+W Sbjct 75 GISLKQTFIYTIGVVPLTLICSLGLAILLNRKIRGMKFFRTAFFFPYVTSLVAIAVVWNM 134 Query 126 IVAPTDGAISTVLGHRIE----WLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQD 181 + PT G I+ L IE W + ALP + V VW +GY + +LAGL ++P++ Sbjct 135 LFHPTMGPINQFLKLFIENPPGWTSSSTWALPAIIIVSVWRFMGYYMILYLAGLQSVPRE 194 Query 182 IHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDL 241 ++ AA DGA W +F +TLP LRPT FFV + +I+ +VFD V +TGGGP +T++ Sbjct 195 LYEAASMDGAGKWNQFLNVTLPSLRPTTFFVTIMLVINCFKVFDLVQVMTGGGPGRATNV 254 Query 242 VAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQ 277 + + IY EAF G AS +A+VLF+I++ TV Q Sbjct 255 LVYEIYNEAFVKFNFGYASAIAMVLFIIVLAITVAQ 290 >gi|297157521|gb|ADI07233.1| carbohydrate ABC transporter membrane protein [Streptomyces bingchenggensis BCW-1] Length=318 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 110/277 (40%), Positives = 168/277 (61%), Gaps = 5/277 (1%) Query 6 RRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDSGF 65 R ALA +AP+L+G + FLL P L ++LS R++LL P ++VGL N+ ++ D F Sbjct 32 RGDGALAALFIAPALLGFLVFLLWPTLRGIYLSFTRFNLLTPAKWVGLDNYIRMVHDPIF 91 Query 66 ADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMWRW 125 DSL VT +V I + QTV L+ A LL +RL + + R + + P++ + + V+W W Sbjct 92 WDSLKVTVEYVVINIGVQTVSALVIAVLL-QRLTQSAVLRGIVLAPYLMSNVVAGVVWLW 150 Query 126 IVAPTDGAISTVLG----HRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQD 181 ++ G + ++ R+ +L D A+P ++ + VW +VGY +L AGL AIP D Sbjct 151 MLDNQLGIGNEIIQSLGLDRVPFLADETWAIPTIALINVWRHVGYTALLLFAGLQAIPND 210 Query 182 IHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDL 241 ++ AA+ DGAS W+ FWRIT+P+LRP + VL+ +I + QVFDTV T GGP +T++ Sbjct 211 MYEAAKVDGASEWRMFWRITMPLLRPVLAVVLIMTVIGSFQVFDTVAVTTSGGPANATNV 270 Query 242 VAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQH 278 + + IY AFG G AS M+V L +L TV+Q+ Sbjct 271 LQYYIYGSAFGRFQFGYASAMSVALLAVLSAITVIQY 307 >gi|261366251|ref|ZP_05979134.1| glycerol-3-phosphate ABC transporter, permease protein [Subdoligranulum variabile DSM 15176] gi|282571846|gb|EFB77381.1| glycerol-3-phosphate ABC transporter, permease protein [Subdoligranulum variabile DSM 15176] Length=289 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 108/285 (38%), Positives = 159/285 (56%), Gaps = 1/285 (0%) Query 4 APRRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLR-YVGLTNWRSVLTD 62 A + + YA L P FL P + ++LS D LG + +VG N+ +LT Sbjct 5 AEKLKGCSPYAYLIPCFAIFAMFLFYPFVKTIYLSFFLTDKLGRAKIFVGAENYTDLLTS 64 Query 63 SGFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVM 122 F +S++VT +FV IVV +LGL+AA L ++ PG F T Y LP A A++ Sbjct 65 ESFYNSILVTLIFVVIVVFGSMLLGLIAAVLCSKTFPGIRAFSTAYALPMAIASSGAAMI 124 Query 123 WRWIVAPTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQDI 182 ++ I+ PT G + + G I W++DP AL V+ + W N G L+F AGL I + I Sbjct 125 FKVILNPTIGLFNKITGLDINWISDPRYALICVAVLTAWLNSGINFLYFSAGLGNIDESI 184 Query 183 HNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDLV 242 + A DGA+A+Q+F+R+TLP L P MF+ LV II A Q F V LT GGP ST+L+ Sbjct 185 YERASVDGANAFQKFFRLTLPGLSPIMFYTLVVNIIQAFQSFGQVKILTQGGPGESTNLI 244 Query 243 AHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISY 287 + IY +AF G A+ +V+LF+I++ T+V ++ + Y Sbjct 245 VYSIYRDAFFNYKFGSAAAQSVILFLIIMALTLVMFKIEKKGVKY 289 >gi|239617079|ref|YP_002940401.1| binding-protein-dependent transport systems inner membrane component [Kosmotoga olearia TBF 19.5.1] gi|239505910|gb|ACR79397.1| binding-protein-dependent transport systems inner membrane component [Kosmotoga olearia TBF 19.5.1] Length=288 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 111/288 (39%), Positives = 167/288 (58%), Gaps = 4/288 (1%) Query 1 MRDAPRRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVL 60 M ++ AY LL P+++ + L+P+ LSL RW ++ R+VGL N+ + Sbjct 1 MTKISSKKYMAAYLLLLPNIILYILVRLIPLFGTFGLSLFRWSMVETPRFVGLANFARMW 60 Query 61 TDSGFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIA 120 D F + T ++ A VVPA LGLL A LL + +PG +FRTL+ P+I +P+ +A Sbjct 61 KDPNFWIAFKNTLLYTAYVVPAAVFLGLLLAVLLNKDIPGMKVFRTLFFFPFITSPVFVA 120 Query 121 VMWRWIVAPTDGAISTVLG----HRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLM 176 ++WR + + G I+ L I WLT ALP ++ V +W VGY L FLAGL Sbjct 121 MIWRSLYSTDQGLINGFLAIFGIESIPWLTSTRWALPSLAIVAIWQIVGYNMLIFLAGLQ 180 Query 177 AIPQDIHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQ 236 IP+ + +A+ DGA W+ FW+IT+P+LRP FV++ +I A Q+FD Y +T GGP Sbjct 181 GIPRSYYESAQIDGAKRWKVFWKITVPLLRPITMFVVIINLIGALQLFDLTYIITQGGPS 240 Query 237 GSTDLVAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRR 284 +T + + IY F +G AS +A++LFVI++G ++ Q FRRR Sbjct 241 KATLTLVYYIYNYGFKYMRMGYASAVAIILFVIILGLSIFQKTLFRRR 288 >gi|88855128|ref|ZP_01129793.1| sugar ABC transporter, permease protein [marine actinobacterium PHSC20C1] gi|88815656|gb|EAR25513.1| sugar ABC transporter, permease protein [marine actinobacterium PHSC20C1] Length=315 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 106/291 (37%), Positives = 172/291 (60%), Gaps = 9/291 (3%) Query 6 RRRTALAY-----ALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVL 60 RRRT+ Y A L PS + + F+L P++ W+S W+L+ P+ ++G N++S+L Sbjct 24 RRRTSAGYVLTVCAFLLPSAIPLALFVLGPMIAAAWISFTEWNLITPMEFIGWANYQSLL 83 Query 61 TDSGFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIA 120 D + + T ++A +P + GL A L R L G L+R +Y LP + + +A+A Sbjct 84 ADERTGEVFLHTLQYIAGYLPLVYIGGLALALALNRALKGRSLWRGIYFLPVVTSWIAVA 143 Query 121 VMWRWIVAPTDGAISTVLG----HRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLM 176 ++WRW++ P +G ++ LG W TDP A+ + W ++G+V + LAGL Sbjct 144 IVWRWLLNPNNGVVNVALGWFGIDGPGWWTDPDWAMVSIILASAWKDLGFVMVILLAGLQ 203 Query 177 AIPQDIHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQ 236 +I D+++AA+ DGA W R +T+PML P+ FFV+V +I+ QVFD VYA+TGGGP Sbjct 204 SINPDLYDAAKVDGAGPWSRLKNVTIPMLSPSTFFVVVISLINGFQVFDQVYAMTGGGPG 263 Query 237 GSTDLVAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISY 287 GST +V +IY F A G AS ++ +LF++++ TV+Q + ++ + Y Sbjct 264 GSTQVVVQQIYDLTFRYGAAGEASALSWLLFIVILAVTVIQIIGQKKWVHY 314 >gi|182417537|ref|ZP_02948864.1| glycerol-3-phosphate ABC transporter [Clostridium butyricum 5521] gi|237665520|ref|ZP_04525508.1| glycerol-3-phosphate ABC transporter [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378706|gb|EDT76233.1| glycerol-3-phosphate ABC transporter [Clostridium butyricum 5521] gi|237658467|gb|EEP56019.1| glycerol-3-phosphate ABC transporter [Clostridium butyricum E4 str. BoNT E BL5262] Length=287 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 107/286 (38%), Positives = 163/286 (57%), Gaps = 2/286 (0%) Query 4 APRRRTALA-YALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLG-PLRYVGLTNWRSVLT 61 + +++ +A Y + PSL+ FL P ++LSL++ D +G P +VG+ N+ + + Sbjct 2 SKNKKSLIAPYGFILPSLIIFSLFLFYPFFKTIYLSLYKTDKMGQPKLFVGIENYTDLFS 61 Query 62 DSGFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAV 121 F +S++VT +FV IVV LGL+ A L + PG +F T Y LP A + A+ Sbjct 62 SPSFYNSILVTLIFVGIVVIGSMALGLMTAVLCNKSFPGIRVFSTAYALPMAIASTSAAM 121 Query 122 MWRWIVAPTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQD 181 ++R I+ P+ G ++ +L I WLTDP AL V+ + W N G L+F AGL I + Sbjct 122 IFRIILHPSVGILNKILKLDINWLTDPKYALICVALLTAWLNSGINFLYFSAGLSNIDES 181 Query 182 IHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDL 241 I+ A DGA + Q+F +ITLP L P MF+ LV II A Q F V LT GGP ST+L Sbjct 182 IYERASIDGAGSIQQFLKITLPGLSPIMFYTLVVNIIQAFQAFGQVKILTQGGPGESTNL 241 Query 242 VAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISY 287 + + IY +AF G A+ +VVLF+I++ T++ ++ + Y Sbjct 242 LVYSIYRDAFFNYRFGSAAAQSVVLFIIVMILTLIMFKVEKKGVKY 287 >gi|160939608|ref|ZP_02086956.1| hypothetical protein CLOBOL_04500 [Clostridium bolteae ATCC BAA-613] gi|158437399|gb|EDP15163.1| hypothetical protein CLOBOL_04500 [Clostridium bolteae ATCC BAA-613] Length=288 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 106/288 (37%), Positives = 162/288 (57%), Gaps = 1/288 (0%) Query 1 MRDAPRRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLR-YVGLTNWRSV 59 M+ + A Y + P+L+ FL P ++LSL++ + +G + +VGL N+ + Sbjct 1 MKSDSLLKKAGPYGYILPALLVFAVFLFYPFFKTIYLSLYKTNKMGQAKLFVGLGNYMEL 60 Query 60 LTDSGFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAI 119 F +SL VT +FVAIVV LGLLAA L + PG +F T Y LP A + Sbjct 61 FQSESFYNSLAVTLLFVAIVVAGSMALGLLAAVLCNKAFPGIRIFSTAYALPMAIASSSA 120 Query 120 AVMWRWIVAPTDGAISTVLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIP 179 A++++ ++ P+ G ++ +LG I W+ DP AL V+ + W N G L+F AGL I Sbjct 121 AMIFKIMLHPSIGIVNKLLGLDINWINDPKYALICVALLTAWLNSGINFLYFSAGLSNID 180 Query 180 QDIHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGST 239 + I+ A DGA+ Q+F+R+TLP L P MF+ +V II A Q F V LT GGP ST Sbjct 181 ETIYERASVDGANGIQKFFRLTLPGLSPIMFYTIVVNIIQAFQSFGQVKILTQGGPGEST 240 Query 240 DLVAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISY 287 +L+ + IY +AF G A+ +V+LF I++ T++ ++ +SY Sbjct 241 NLIVYSIYRDAFFNYRFGSAAAQSVILFAIIMVMTLMMFKAEKKGVSY 288 >gi|239617329|ref|YP_002940651.1| binding-protein-dependent transport systems inner membrane component [Kosmotoga olearia TBF 19.5.1] gi|239506160|gb|ACR79647.1| binding-protein-dependent transport systems inner membrane component [Kosmotoga olearia TBF 19.5.1] Length=295 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 103/294 (36%), Positives = 169/294 (58%), Gaps = 6/294 (2%) Query 1 MRDAPRRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLR-YVGLTNWRSV 59 M+ R T AY L+P+LV F+++P++VV ++S WD + P++ +VGL N+ + Sbjct 2 MKKRKLRETITAYVCLSPTLVLATIFMIIPMIVVFYVSFTNWDFVSPVKKFVGLKNYIYI 61 Query 60 LTDSGFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAI 119 +D F S+ T F + +P V+ L A LL +++ +R Y P + +A+ Sbjct 62 FSDEKFLKSIRNTFYFACVKIPLDLVISLFIAVLLDKKIRMKKFYRVSYFAPVVTPMVAV 121 Query 120 AVMWRWIVAPTDGAISTVLG----HRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGL 175 A++W W+ PT G ++ +L I+WL DP A+P V +W +GY + FLAGL Sbjct 122 ALIWIWLFDPTFGPLNQILSFVGLKPIKWLYDPNWAMPSVILFSLWKGLGYDIIIFLAGL 181 Query 176 MAIPQDIHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALT-GGG 234 +IP + AA DGA++ Q F++ITLP+L P ++FV++ GII++ +VF + +T GG Sbjct 182 QSIPNHLIEAAYIDGANSRQTFFKITLPLLSPIVYFVVLMGIINSFKVFAQISVMTPKGG 241 Query 235 PQGSTDLVAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYE 288 P ST ++ IY +AF +GRAS A++LF +++ T VQ R+ + Y Sbjct 242 PLYSTGVMVFYIYQQAFENYKMGRASAAALILFGMVIALTQVQKRLGRKSVEYS 295 >gi|29376740|ref|NP_815894.1| ABC transporter permease [Enterococcus faecalis V583] gi|255972189|ref|ZP_05422775.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|255975302|ref|ZP_05425888.1| conserved hypothetical protein [Enterococcus faecalis T2] 47 more sequence titles Length=300 Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 103/276 (38%), Positives = 159/276 (58%), Gaps = 4/276 (1%) Query 6 RRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLTDSGF 65 R+ T A + +AP+ +G F L+P++ + L+ WD +VG+ N+ ++ D F Sbjct 15 RKNTWTALSFIAPNFIGFFLFTLIPVICSLILAFMSWDSFSTPEFVGMKNFTKMIHDDTF 74 Query 66 ADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIAVMWRW 125 SL T ++ VVP + L A LL R++ G FRT + P++ + +AIAV+W Sbjct 75 WISLKQTFIYTIGVVPLTLICSLGLAILLNRKIRGMKFFRTAFFFPYVTSLVAIAVVWNM 134 Query 126 IVAPTDGAISTVLGHRIE----WLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMAIPQD 181 + PT G I+ L IE W + ALP + V VW +GY + +LAGL ++P++ Sbjct 135 LFHPTMGPINQFLKLFIENPPGWTSSSTWALPAIIIVSVWRFMGYYMILYLAGLQSVPRE 194 Query 182 IHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQGSTDL 241 ++ AA DGA W +F +TLP LRPT FFV + +I+ +VFD V +TGGGP +T++ Sbjct 195 LYEAASMDGAGKWNQFLNVTLPSLRPTTFFVTIMLVINCFKVFDLVQVMTGGGPGRATNV 254 Query 242 VAHRIYAEAFGAAAIGRASVMAVVLFVILVGATVVQ 277 + + IY EAF G AS +A+VLF+I++ TV Q Sbjct 255 LVYEIYNEAFVKFNFGYASAIAMVLFIIVLAITVAQ 290 Lambda K H 0.329 0.141 0.445 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 473963892608 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40