BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2325c Length=282 Score E Sequences producing significant alignments: (Bits) Value gi|15609462|ref|NP_216841.1| hypothetical protein Rv2325c [Mycob... 541 5e-152 gi|340627335|ref|YP_004745787.1| hypothetical protein MCAN_23561... 537 5e-151 gi|339295229|gb|AEJ47340.1| hypothetical protein CCDC5079_2150 [... 502 3e-140 gi|240170969|ref|ZP_04749628.1| hypothetical protein MkanA1_1678... 427 8e-118 gi|183983604|ref|YP_001851895.1| hypothetical protein MMAR_3625 ... 411 7e-113 gi|118616949|ref|YP_905281.1| hypothetical protein MUL_1240 [Myc... 409 2e-112 gi|15827377|ref|NP_301640.1| hypothetical protein ML0849 [Mycoba... 384 6e-105 gi|254820669|ref|ZP_05225670.1| cobalt transport protein [Mycoba... 351 6e-95 gi|120404763|ref|YP_954592.1| cobalt transport protein [Mycobact... 351 7e-95 gi|296166342|ref|ZP_06848778.1| cobalt transporter [Mycobacteriu... 350 1e-94 gi|342857445|ref|ZP_08714101.1| cobalt transport protein [Mycoba... 347 2e-93 gi|342860923|ref|ZP_08717572.1| hypothetical protein MCOL_18667 ... 341 9e-92 gi|126436019|ref|YP_001071710.1| cobalt transport protein [Mycob... 337 1e-90 gi|108800396|ref|YP_640593.1| cobalt transport protein [Mycobact... 337 1e-90 gi|118472300|ref|YP_888742.1| cobalt transporter [Mycobacterium ... 332 3e-89 gi|254774802|ref|ZP_05216318.1| hypothetical protein MaviaA2_090... 328 5e-88 gi|118466723|ref|YP_881298.1| cobalt transport protein [Mycobact... 328 5e-88 gi|41408195|ref|NP_961031.1| hypothetical protein MAP2097c [Myco... 327 1e-87 gi|145223318|ref|YP_001133996.1| cobalt transport protein [Mycob... 318 6e-85 gi|333990227|ref|YP_004522841.1| hypothetical protein JDM601_158... 303 2e-80 gi|254776374|ref|ZP_05217890.1| hypothetical protein MaviaA2_171... 293 2e-77 gi|41409230|ref|NP_962066.1| hypothetical protein MAP3132 [Mycob... 292 4e-77 gi|336459221|gb|EGO38166.1| ATPase component of various ABC-type... 292 4e-77 gi|118467064|ref|YP_883115.1| cobalt transport protein, putative... 290 2e-76 gi|169628804|ref|YP_001702453.1| hypothetical protein MAB_1714 [... 268 7e-70 gi|169630227|ref|YP_001703876.1| hypothetical protein MAB_3145 [... 246 2e-63 gi|262200191|ref|YP_003271399.1| cobalt transporter [Gordonia br... 198 6e-49 gi|336178874|ref|YP_004584249.1| ABC transporter-like protein [F... 187 1e-45 gi|343926289|ref|ZP_08765798.1| putative ABC transporter permeas... 183 3e-44 gi|226306175|ref|YP_002766135.1| ABC transporter permease protei... 178 8e-43 gi|229490874|ref|ZP_04384709.1| cobalt transport protein [Rhodoc... 177 2e-42 gi|326384361|ref|ZP_08206042.1| cobalt transport protein [Gordon... 172 4e-41 gi|21104322|emb|CAC85368.1| hypothetical protein [Gordonia sp. Kb2] 171 2e-40 gi|54022647|ref|YP_116889.1| putative ABC transporter [Nocardia ... 154 1e-35 gi|320095167|ref|ZP_08026874.1| hypothetical protein HMPREF9005_... 85.1 1e-14 gi|293193987|ref|ZP_06609907.1| putative cobalt transport protei... 81.6 1e-13 gi|154508293|ref|ZP_02043935.1| hypothetical protein ACTODO_0078... 81.6 1e-13 gi|310659468|ref|YP_003937189.1| ybaf [Clostridium sticklandii D... 80.1 3e-13 gi|339498021|ref|ZP_08658997.1| ABC-type cobalt transport system... 78.2 1e-12 gi|299144418|ref|ZP_07037498.1| cobalt transport family protein ... 77.4 2e-12 gi|333398833|ref|ZP_08480646.1| ECF transporter energy-coupling ... 77.0 3e-12 gi|296140187|ref|YP_003647430.1| ABC transporter [Tsukamurella p... 76.6 4e-12 gi|339625096|ref|ZP_08660885.1| ABC-type cobalt transport system... 75.9 6e-12 gi|300174000|ref|YP_003773166.1| ECF transporter energy-coupling... 75.5 9e-12 gi|330718941|ref|ZP_08313541.1| ABC-type cobalt transport system... 75.5 1e-11 gi|333447374|ref|ZP_08482316.1| ECF transporter energy-coupling ... 75.1 1e-11 gi|116874000|ref|YP_850781.1| cobalt transport protein [Listeria... 75.1 1e-11 gi|16804672|ref|NP_466157.1| hypothetical protein lmo2634 [Liste... 74.7 1e-11 gi|47097671|ref|ZP_00235186.1| cobalt transport protein [Listeri... 74.7 1e-11 gi|217966167|ref|YP_002351845.1| cobalt transport protein [Liste... 74.7 1e-11 >gi|15609462|ref|NP_216841.1| hypothetical protein Rv2325c [Mycobacterium tuberculosis H37Rv] gi|15841828|ref|NP_336865.1| hypothetical protein MT2387 [Mycobacterium tuberculosis CDC1551] gi|31793508|ref|NP_856001.1| hypothetical protein Mb2352c [Mycobacterium bovis AF2122/97] 79 more sequence titles Length=282 Score = 541 bits (1393), Expect = 5e-152, Method: Compositional matrix adjust. Identities = 282/282 (100%), Positives = 282/282 (100%), Gaps = 0/282 (0%) Query 1 MTTTSAPARNGTRRPSRPIVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIG 60 MTTTSAPARNGTRRPSRPIVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIG Sbjct 1 MTTTSAPARNGTRRPSRPIVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIG 60 Query 61 MMAALVLAAARIAHIPRGALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGAL 120 MMAALVLAAARIAHIPRGALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGAL Sbjct 61 MMAALVLAAARIAHIPRGALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGAL 120 Query 121 HFLRITALSVVLLALGAMVSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAF 180 HFLRITALSVVLLALGAMVSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAF Sbjct 121 HFLRITALSVVLLALGAMVSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAF 180 Query 181 PMLIDEFQVLYAARRLRPKRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITA 240 PMLIDEFQVLYAARRLRPKRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITA Sbjct 181 PMLIDEFQVLYAARRLRPKRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITA 240 Query 241 RGGTGQLSAHPGRPKLADWVTLAITAMASGTAVAIESLILHS 282 RGGTGQLSAHPGRPKLADWVTLAITAMASGTAVAIESLILHS Sbjct 241 RGGTGQLSAHPGRPKLADWVTLAITAMASGTAVAIESLILHS 282 >gi|340627335|ref|YP_004745787.1| hypothetical protein MCAN_23561 [Mycobacterium canettii CIPT 140010059] gi|340005525|emb|CCC44687.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=282 Score = 537 bits (1384), Expect = 5e-151, Method: Compositional matrix adjust. Identities = 280/282 (99%), Positives = 281/282 (99%), Gaps = 0/282 (0%) Query 1 MTTTSAPARNGTRRPSRPIVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIG 60 MTTTS PARNGTRRPSRPIVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIG Sbjct 1 MTTTSTPARNGTRRPSRPIVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIG 60 Query 61 MMAALVLAAARIAHIPRGALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGAL 120 MMAALVLAAARIAHIPRGALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGG+QLGLGGAL Sbjct 61 MMAALVLAAARIAHIPRGALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGLQLGLGGAL 120 Query 121 HFLRITALSVVLLALGAMVSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAF 180 HFLRITALSVVLLALGAMVSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAF Sbjct 121 HFLRITALSVVLLALGAMVSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAF 180 Query 181 PMLIDEFQVLYAARRLRPKRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITA 240 PMLIDEFQVLYAARRLRPKRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITA Sbjct 181 PMLIDEFQVLYAARRLRPKRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITA 240 Query 241 RGGTGQLSAHPGRPKLADWVTLAITAMASGTAVAIESLILHS 282 RGGTGQLSAHPGRPKLADWVTLAITAMASGTAVAIESLILHS Sbjct 241 RGGTGQLSAHPGRPKLADWVTLAITAMASGTAVAIESLILHS 282 >gi|339295229|gb|AEJ47340.1| hypothetical protein CCDC5079_2150 [Mycobacterium tuberculosis CCDC5079] Length=263 Score = 502 bits (1292), Expect = 3e-140, Method: Compositional matrix adjust. Identities = 262/263 (99%), Positives = 263/263 (100%), Gaps = 0/263 (0%) Query 20 VLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAARIAHIPRGA 79 +LLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAARIAHIPRGA Sbjct 1 MLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAARIAHIPRGA 60 Query 80 LPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHFLRITALSVVLLALGAMV 139 LPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHFLRITALSVVLLALGAMV Sbjct 61 LPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHFLRITALSVVLLALGAMV 120 Query 140 SWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLYAARRLRPK 199 SWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLYAARRLRPK Sbjct 121 SWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLYAARRLRPK 180 Query 200 RMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARGGTGQLSAHPGRPKLADW 259 RMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARGGTGQLSAHPGRPKLADW Sbjct 181 RMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARGGTGQLSAHPGRPKLADW 240 Query 260 VTLAITAMASGTAVAIESLILHS 282 VTLAITAMASGTAVAIESLILHS Sbjct 241 VTLAITAMASGTAVAIESLILHS 263 >gi|240170969|ref|ZP_04749628.1| hypothetical protein MkanA1_16783 [Mycobacterium kansasii ATCC 12478] Length=286 Score = 427 bits (1098), Expect = 8e-118, Method: Compositional matrix adjust. Identities = 227/270 (85%), Positives = 247/270 (92%), Gaps = 0/270 (0%) Query 10 NGTRRPSRPIVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAA 69 G RRP+RP+VLL+PVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIG+MAALVL A Sbjct 14 RGARRPTRPVVLLVPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGLMAALVLTA 73 Query 70 ARIAHIPRGALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHFLRITALS 129 AR+AHIPRGA+PSVPRWLW+VLAIG +TAALAGG P +AV GV+L LGGAL+FLRITALS Sbjct 74 ARLAHIPRGAVPSVPRWLWVVLAIGGITAALAGGAPSIAVAGVELELGGALNFLRITALS 133 Query 130 VVLLALGAMVSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQV 189 +VLLALGAMVSWTTNVAEI PA+ATLGRP R+LRIPVDEWAV LALALRAFPMLIDEFQV Sbjct 134 IVLLALGAMVSWTTNVAEIGPALATLGRPLRLLRIPVDEWAVTLALALRAFPMLIDEFQV 193 Query 190 LYAARRLRPKRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARGGTGQLSA 249 LYAAR+LRPKR+P RKARRQR E+IDLLAAAITVTLRRADEMGDAITARGGTGQLSA Sbjct 194 LYAARQLRPKRIPRGRKARRQRRRTEVIDLLAAAITVTLRRADEMGDAITARGGTGQLSA 253 Query 250 HPGRPKLADWVTLAITAMASGTAVAIESLI 279 +P RPKLADWV L TAMA G AV IE+L+ Sbjct 254 YPARPKLADWVALTTTAMAGGAAVVIETLL 283 >gi|183983604|ref|YP_001851895.1| hypothetical protein MMAR_3625 [Mycobacterium marinum M] gi|183176930|gb|ACC42040.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length=286 Score = 411 bits (1056), Expect = 7e-113, Method: Compositional matrix adjust. Identities = 227/280 (82%), Positives = 250/280 (90%), Gaps = 1/280 (0%) Query 3 TTSAPARNGTRRPSRPIVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMM 62 + SA G+RR +RP+VLL+PVP S IHDLWAGTKLLVVF ISVLLTFYPGWVTIG+M Sbjct 7 SASATPERGSRRAARPVVLLVPVPRGSAIHDLWAGTKLLVVFAISVLLTFYPGWVTIGLM 66 Query 63 AALVLAAARIAHIPRGALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHF 122 AALVL AA IAHIPRGA+PS+PRWL++VLA G LTAALAGG P+V+VGGV+LGLGGAL+F Sbjct 67 AALVLVAAWIAHIPRGAVPSMPRWLFVVLAFGGLTAALAGGDPMVSVGGVELGLGGALNF 126 Query 123 LRITALSVVLLALGAMVSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPM 182 LRITALS+VLLALGAMVSWTTNVAEI PAVATLGRP R+LRIPVDEWAV LALALRAFPM Sbjct 127 LRITALSIVLLALGAMVSWTTNVAEIGPAVATLGRPLRLLRIPVDEWAVVLALALRAFPM 186 Query 183 LIDEFQVLYAARRLRPKRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARG 242 LIDEFQVLYAARRLRP+ MP +RKARRQR E+IDLLAAAITVTLRRADEMGDAITARG Sbjct 187 LIDEFQVLYAARRLRPRPMPVTRKARRQRRGMEVIDLLAAAITVTLRRADEMGDAITARG 246 Query 243 GTGQLSAHPGRPKLADWVTLAITAMASGTAVAIESLILHS 282 GTGQLSA+P RPKL DWVTLAITA SG AV IE++ LH+ Sbjct 247 GTGQLSANPTRPKLGDWVTLAITAATSGAAVVIETM-LHA 285 >gi|118616949|ref|YP_905281.1| hypothetical protein MUL_1240 [Mycobacterium ulcerans Agy99] gi|118569059|gb|ABL03810.1| conserved hypothetical membrane protein [Mycobacterium ulcerans Agy99] Length=286 Score = 409 bits (1052), Expect = 2e-112, Method: Compositional matrix adjust. Identities = 226/280 (81%), Positives = 249/280 (89%), Gaps = 1/280 (0%) Query 3 TTSAPARNGTRRPSRPIVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMM 62 + SA G+RR +RP+VLL+P P S IHDLWAGTKLLVVF ISVLLTFYPGWVTIG+M Sbjct 7 SASATPERGSRRATRPVVLLVPAPRGSAIHDLWAGTKLLVVFAISVLLTFYPGWVTIGLM 66 Query 63 AALVLAAARIAHIPRGALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHF 122 AALVL AA IAHIPRGA+PS+PRWL++VLA G LTAALAGG P+V+VGGV+LGLGGAL+F Sbjct 67 AALVLVAAWIAHIPRGAVPSMPRWLFVVLAFGGLTAALAGGDPMVSVGGVELGLGGALNF 126 Query 123 LRITALSVVLLALGAMVSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPM 182 LRITALS+VLLALGAMVSWTTNVAEI PAVATLGRP R+LRIPVDEWAV LALALRAFPM Sbjct 127 LRITALSIVLLALGAMVSWTTNVAEIGPAVATLGRPLRLLRIPVDEWAVVLALALRAFPM 186 Query 183 LIDEFQVLYAARRLRPKRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARG 242 LIDEFQVLYAARRLRP+ MP +RKARRQR E+IDLLAAAITVTLRRADEMGDAITARG Sbjct 187 LIDEFQVLYAARRLRPRPMPVTRKARRQRRGMEVIDLLAAAITVTLRRADEMGDAITARG 246 Query 243 GTGQLSAHPGRPKLADWVTLAITAMASGTAVAIESLILHS 282 GTGQLSA+P RPKL DWVTLAITA SG AV IE++ LH+ Sbjct 247 GTGQLSANPTRPKLGDWVTLAITAATSGAAVVIETM-LHA 285 >gi|15827377|ref|NP_301640.1| hypothetical protein ML0849 [Mycobacterium leprae TN] gi|221229854|ref|YP_002503270.1| hypothetical protein MLBr_00849 [Mycobacterium leprae Br4923] gi|2342623|emb|CAB11402.1| hypothetical protein MLCB22.37c [Mycobacterium leprae] gi|13092927|emb|CAC31230.1| conserved hypothetical protein [Mycobacterium leprae] gi|219932961|emb|CAR70944.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length=283 Score = 384 bits (987), Expect = 6e-105, Method: Compositional matrix adjust. Identities = 219/282 (78%), Positives = 245/282 (87%), Gaps = 1/282 (0%) Query 1 MTTTSAPARNGTRRPSRPIVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIG 60 MT+ S + RR SRP+VLL+PVPG+S IHDLWAGTKLLVVFG+ VLLTFYPGWVTIG Sbjct 1 MTSLSMSEHHVPRRRSRPVVLLVPVPGTSTIHDLWAGTKLLVVFGVEVLLTFYPGWVTIG 60 Query 61 MMAALVLAAARIAHIPRGALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGAL 120 ++AALV AA IA IPR LPS+PRWLWIV+ +G TAALAGG+PVV++GGV +GLGG L Sbjct 61 LVAALVCGAAWIARIPRDVLPSMPRWLWIVVVLGGFTAALAGGSPVVSMGGVDIGLGGVL 120 Query 121 HFLRITALSVVLLALGAMVSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAF 180 +FLRITA SVVLL LGAMVSWTTNVAEI PA+ATLGRP R+ RIPVDEWAVA+ALALRAF Sbjct 121 NFLRITAWSVVLLGLGAMVSWTTNVAEIGPAMATLGRPLRIFRIPVDEWAVAVALALRAF 180 Query 181 PMLIDEFQVLYAARRLRPKRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITA 240 PMLI+EFQVLYAARRLRPK++ SRKARRQR ARELIDLLAAAITVTLRRADEMGDAITA Sbjct 181 PMLINEFQVLYAARRLRPKQILNSRKARRQRQARELIDLLAAAITVTLRRADEMGDAITA 240 Query 241 RGGTGQLSAHPGRPKLADWVTLAITAMASGTAVAIESLILHS 282 RGG GQLSA+P RPKLADWVTLAIT S TAV +E+ ILH+ Sbjct 241 RGGIGQLSAYPARPKLADWVTLAITITTSSTAVVLET-ILHT 281 >gi|254820669|ref|ZP_05225670.1| cobalt transport protein [Mycobacterium intracellulare ATCC 13950] Length=284 Score = 351 bits (901), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 198/275 (72%), Positives = 235/275 (86%), Gaps = 1/275 (0%) Query 8 ARNGTRRPSRPIVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVL 67 A+ TRR RP+VLL+PVPG+S IH+LWAGTKLLVV G+S+LLTFYPGW ++G+M L++ Sbjct 10 AKGKTRRTPRPVVLLVPVPGTSKIHELWAGTKLLVVLGVSILLTFYPGWASVGLMLVLLI 69 Query 68 AAARIAHIPRGALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHFLRITA 127 AAR+AHIPRGALPS RW+WIVLA+G +TAAL G+PVV++ GV +GLGG LHF+R+TA Sbjct 70 TAARLAHIPRGALPSPRRWIWIVLAVGGITAALGAGSPVVSIAGVHIGLGGTLHFVRVTA 129 Query 128 LSVVLLALGAMVSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEF 187 LS+VL+ LGAM+SWTTNVAE+ PA+A LGRP R LRIP DEWAVALALALRAFPMLI+EF Sbjct 130 LSIVLIGLGAMLSWTTNVAEMGPALAALGRPLRWLRIPSDEWAVALALALRAFPMLIEEF 189 Query 188 QVLYAARRLRPKRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARGGTGQL 247 QVLYAARRLRP P SR+ARR++ AR++IDLL AAI VTLRRADEMGDAITARGG GQL Sbjct 190 QVLYAARRLRPNETPRSRRARRRQQARDMIDLLTAAIVVTLRRADEMGDAITARGGIGQL 249 Query 248 SAHPGRPKLADWVTLAITAMASGTAVAIESLI-LH 281 SA PGRPKLADWVTLAITA A V ++S++ LH Sbjct 250 SAAPGRPKLADWVTLAITAAAGAAGVVVDSILQLH 284 >gi|120404763|ref|YP_954592.1| cobalt transport protein [Mycobacterium vanbaalenii PYR-1] gi|119957581|gb|ABM14586.1| cobalt transport protein [Mycobacterium vanbaalenii PYR-1] Length=282 Score = 351 bits (901), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 182/282 (65%), Positives = 222/282 (79%), Gaps = 5/282 (1%) Query 1 MTTTSAPARNGTRRPSRPIVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIG 60 MT +AP R+P R +V+L PVPG +VIH LWAG+KLL+V GI VLLTFYPGWV IG Sbjct 1 MTAAAAP-----RKPRRQVVVLRPVPGDTVIHRLWAGSKLLIVAGIGVLLTFYPGWVPIG 55 Query 61 MMAALVLAAARIAHIPRGALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGAL 120 +A LV+ AR+A IPRG LP++P WLW +L +G +TAA AGG PV+ VG V++GLGG L Sbjct 56 AVALLVVVTARMARIPRGVLPTIPAWLWFLLLLGAVTAAFAGGDPVIGVGSVEVGLGGLL 115 Query 121 HFLRITALSVVLLALGAMVSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAF 180 +FLRITAL+ VLL LGAMVSWTTNVAE++PAVA LGRP R LRIPVD+WAV LALALRAF Sbjct 116 NFLRITALATVLLGLGAMVSWTTNVAEVAPAVARLGRPLRPLRIPVDDWAVTLALALRAF 175 Query 181 PMLIDEFQVLYAARRLRPKRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITA 240 PMLIDEF VLYAARRLRP+ + +R+ + +R A E+IDLLAAAITV+LRRADEMGDAITA Sbjct 176 PMLIDEFSVLYAARRLRPREVDGNRRTKLRRWAAEVIDLLAAAITVSLRRADEMGDAITA 235 Query 241 RGGTGQLSAHPGRPKLADWVTLAITAMASGTAVAIESLILHS 282 RGG GQ+SA P P+ DWV ++ + G A+A+E +L + Sbjct 236 RGGAGQISAAPSGPRRRDWVAFSVVILVCGAALALELTVLGT 277 >gi|296166342|ref|ZP_06848778.1| cobalt transporter [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898305|gb|EFG77875.1| cobalt transporter [Mycobacterium parascrofulaceum ATCC BAA-614] Length=265 Score = 350 bits (898), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 200/263 (77%), Positives = 228/263 (87%), Gaps = 1/263 (0%) Query 19 IVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAARIAHIPRG 78 +VLL+PVPG S IH+LWAGTKLLVVFG+SVLLT YPGWVTIG +AALVLAA A IPRG Sbjct 1 MVLLVPVPGGSPIHNLWAGTKLLVVFGVSVLLTLYPGWVTIGSVAALVLAAVWTARIPRG 60 Query 79 ALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHFLRITALSVVLLALGAM 138 ALPS+PRWLWI+LA+GF TAALAGG+P++++GG+ + LGGAL+FLRIT LSVVLL LGAM Sbjct 61 ALPSIPRWLWILLALGFGTAALAGGSPMMSIGGIHIWLGGALNFLRITTLSVVLLGLGAM 120 Query 139 VSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLYAARRLRP 198 VSWTTNVAEI+PA+A LGRPF+++RIPVDEWAVALALALRAFP+LI+EFQVLYAARRLRP Sbjct 121 VSWTTNVAEIAPALAILGRPFKLVRIPVDEWAVALALALRAFPLLIEEFQVLYAARRLRP 180 Query 199 KRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARGGTGQLSAHPGRPKLAD 258 MP R+AR ++ A IDL+AAAI VTLRRADEMGDAITARGG GQLSA P RPKL D Sbjct 181 NHMPTGRRARVRQTAGNSIDLVAAAIVVTLRRADEMGDAITARGGIGQLSADPARPKLGD 240 Query 259 WVTLAITAMASGTAVAIESLILH 281 WVTLAIT S AVAIE+ I H Sbjct 241 WVTLAITVAVSAAAVAIET-IFH 262 >gi|342857445|ref|ZP_08714101.1| cobalt transport protein [Mycobacterium colombiense CECT 3035] gi|342134778|gb|EGT87944.1| cobalt transport protein [Mycobacterium colombiense CECT 3035] Length=284 Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 190/275 (70%), Positives = 230/275 (84%), Gaps = 0/275 (0%) Query 5 SAPARNGTRRPSRPIVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAA 64 + PA + TRR RP+VLL+PVPG+S IH+LWAGTKLLVV G+S+LLT YPGWVT+G+M Sbjct 7 AKPAPSRTRRTHRPVVLLVPVPGTSKIHELWAGTKLLVVLGVSILLTLYPGWVTVGLMLV 66 Query 65 LVLAAARIAHIPRGALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHFLR 124 L++ AAR+AHIPRGALPS RW+WI LA+G +TAAL G+PV+ + GV +GLGG LHF+R Sbjct 67 LLITAARLAHIPRGALPSPRRWIWIALAVGAVTAALGAGSPVIEIAGVHIGLGGTLHFVR 126 Query 125 ITALSVVLLALGAMVSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLI 184 +TALS+VL+ LGAM+SWTTNVAE+ PA+A LGRP R LRIP DEWAVALALALRAFPMLI Sbjct 127 VTALSIVLIGLGAMLSWTTNVAEMGPALAALGRPLRWLRIPSDEWAVALALALRAFPMLI 186 Query 185 DEFQVLYAARRLRPKRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARGGT 244 +EFQVLYAARRLRP + P +R+ARR++ AR++IDLL AAI VTLRRADEMGDAITARGG Sbjct 187 EEFQVLYAARRLRPNQEPRNRRARRRQQARDMIDLLTAAIVVTLRRADEMGDAITARGGI 246 Query 245 GQLSAHPGRPKLADWVTLAITAMASGTAVAIESLI 279 GQL+A P RPKLADWV L IT A V I++++ Sbjct 247 GQLAAAPARPKLADWVALGITIAAGAIGVVIDAML 281 >gi|342860923|ref|ZP_08717572.1| hypothetical protein MCOL_18667 [Mycobacterium colombiense CECT 3035] gi|342131367|gb|EGT84637.1| hypothetical protein MCOL_18667 [Mycobacterium colombiense CECT 3035] Length=960 Score = 341 bits (874), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 191/272 (71%), Positives = 220/272 (81%), Gaps = 2/272 (0%) Query 5 SAPARNGTRRPSRPIVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAA 64 +A R+ RR RP+VLL PVPGSS IH+LWAGTKLLV FGIS+LLTF+PGWV IG+ A Sbjct 684 AAAKRSSGRR--RPVVLLRPVPGSSPIHELWAGTKLLVAFGISLLLTFFPGWVAIGLTGA 741 Query 65 LVLAAARIAHIPRGALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHFLR 124 L + R+A IPRG LPSVPRWLW+VL I + AA AGG+P V +G V LG GG L FLR Sbjct 742 LAVTGIRLARIPRGVLPSVPRWLWVVLVIVGVNAAFAGGSPRVQLGTVSLGFGGLLDFLR 801 Query 125 ITALSVVLLALGAMVSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLI 184 +TALSVVLLALGA+VSWTTNVA+I+PAVATLGR R LRIPVD+W+VALALALR FPMLI Sbjct 802 LTALSVVLLALGALVSWTTNVAQIAPAVATLGRFLRPLRIPVDDWSVALALALRTFPMLI 861 Query 185 DEFQVLYAARRLRPKRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARGGT 244 DEF+VL+AARRLRPKR P SR AR +R A ++ID++ A ITVTLRRADEMGDAITARGGT Sbjct 862 DEFRVLFAARRLRPKRAPQSRWARLRRPAADVIDVVVAVITVTLRRADEMGDAITARGGT 921 Query 245 GQLSAHPGRPKLADWVTLAITAMASGTAVAIE 276 GQ+SA P RPK ADW+ L+I GTAVA E Sbjct 922 GQISAAPSRPKPADWLALSIVLAVCGTAVAAE 953 >gi|126436019|ref|YP_001071710.1| cobalt transport protein [Mycobacterium sp. JLS] gi|126235819|gb|ABN99219.1| cobalt transport protein [Mycobacterium sp. JLS] Length=280 Score = 337 bits (864), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 184/268 (69%), Positives = 216/268 (81%), Gaps = 0/268 (0%) Query 13 RRPSRPIVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAARI 72 R+P RP+VLL PVPG SVIHDLWAGTKL+ V I VLLTFYPGWV I + LV+ AAR+ Sbjct 6 RKPRRPVVLLRPVPGRSVIHDLWAGTKLIAVAAIGVLLTFYPGWVPIAAVGLLVVVAARL 65 Query 73 AHIPRGALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHFLRITALSVVL 132 AHIP GALPS+P +LW +L IG LTA GG PVVA G V++GLGG +FLRITALS+VL Sbjct 66 AHIPGGALPSIPAFLWGLLFIGGLTATFGGGDPVVAFGSVEVGLGGLFNFLRITALSIVL 125 Query 133 LALGAMVSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLYA 192 L LGAMVSWTTNVAEI+PAVA LGRP R +RIP+D+WAVA+ALALRAFPML+DEF LYA Sbjct 126 LGLGAMVSWTTNVAEIAPAVAKLGRPLRAVRIPIDDWAVAIALALRAFPMLVDEFATLYA 185 Query 193 ARRLRPKRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARGGTGQLSAHPG 252 ARRLRPK+ SRKARR+R E++DLLAAA+T LRRADEMGDAITARGGTGQ+SA P Sbjct 186 ARRLRPKQHLSSRKARRKRWLIEIVDLLAAAVTAALRRADEMGDAITARGGTGQISAAPS 245 Query 253 RPKLADWVTLAITAMASGTAVAIESLIL 280 P+ DW+T+AI + G A+A+E +L Sbjct 246 GPRARDWITMAIIVVVCGAALAVELTVL 273 >gi|108800396|ref|YP_640593.1| cobalt transport protein [Mycobacterium sp. MCS] gi|119869525|ref|YP_939477.1| cobalt transport protein [Mycobacterium sp. KMS] gi|108770815|gb|ABG09537.1| cobalt transport protein [Mycobacterium sp. MCS] gi|119695614|gb|ABL92687.1| cobalt transport protein [Mycobacterium sp. KMS] Length=280 Score = 337 bits (864), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 183/268 (69%), Positives = 216/268 (81%), Gaps = 0/268 (0%) Query 13 RRPSRPIVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAARI 72 R+P RP+VLL PVPG SVIHDLWAGTKL+ V I VLLTFYPGWV I + LV+ AAR+ Sbjct 6 RKPRRPVVLLRPVPGRSVIHDLWAGTKLIAVAAIGVLLTFYPGWVPIAAVGLLVVVAARL 65 Query 73 AHIPRGALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHFLRITALSVVL 132 AHIP GALPS+P +LW +L IG LTA GG PVVA G V++GLGG +FLRITALS+VL Sbjct 66 AHIPGGALPSIPAFLWGLLFIGGLTATFGGGDPVVAFGSVEVGLGGLFNFLRITALSIVL 125 Query 133 LALGAMVSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLYA 192 L LGAMVSWTTNVAEI+PAVA LGRP R +RIP+D+WAVA+ALALRAFPML+DEF LYA Sbjct 126 LGLGAMVSWTTNVAEIAPAVAKLGRPLRAVRIPIDDWAVAIALALRAFPMLVDEFATLYA 185 Query 193 ARRLRPKRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARGGTGQLSAHPG 252 ARRLRPK+ SRKARR+R E++D+LAAA+T LRRADEMGDAITARGGTGQ+SA P Sbjct 186 ARRLRPKQHLSSRKARRKRWLIEIVDVLAAAVTAALRRADEMGDAITARGGTGQISAAPS 245 Query 253 RPKLADWVTLAITAMASGTAVAIESLIL 280 P+ DW+T+AI + G A+A+E +L Sbjct 246 GPRARDWITMAIIVVVCGAALAVELTVL 273 >gi|118472300|ref|YP_888742.1| cobalt transporter [Mycobacterium smegmatis str. MC2 155] gi|118173587|gb|ABK74483.1| cobalt transport protein [Mycobacterium smegmatis str. MC2 155] Length=281 Score = 332 bits (852), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 168/266 (64%), Positives = 208/266 (79%), Gaps = 0/266 (0%) Query 17 RPIVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAARIAHIP 76 +P+VLL PVPG SVIH LWAGTKLL V I ++LTFYPGWV IG A LVL AR+A IP Sbjct 9 KPVVLLRPVPGDSVIHQLWAGTKLLSVAVIGIMLTFYPGWVPIGFTAVLVLVVARLARIP 68 Query 77 RGALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHFLRITALSVVLLALG 136 RG +P++P W+W+++A G LTA AGG+P VG + +GLGG L+FLRITALS+VLL LG Sbjct 69 RGVVPTIPWWMWLLVAFGALTATFAGGSPEFDVGSMTIGLGGLLNFLRITALSIVLLGLG 128 Query 137 AMVSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLYAARRL 196 A+VSWTTNVA+I+PAVATLGRP V RIPV +WAV +ALALRAFPMLIDEF+ LYAARRL Sbjct 129 ALVSWTTNVADIAPAVATLGRPLGVFRIPVHDWAVTIALALRAFPMLIDEFRTLYAARRL 188 Query 197 RPKRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARGGTGQLSAHPGRPKL 256 RP+ P + +AR ++ ++DL+AAA+TV LRR DEMGDAITARGGTGQ SA +P+ Sbjct 189 RPRERPDTFRARHRQRVSGVVDLIAAAVTVALRRGDEMGDAITARGGTGQFSAAESKPRR 248 Query 257 ADWVTLAITAMASGTAVAIESLILHS 282 DWV A+ A+ GTA+A+E +L + Sbjct 249 LDWVAFAVLAVVCGTALALELTVLGT 274 >gi|254774802|ref|ZP_05216318.1| hypothetical protein MaviaA2_09045 [Mycobacterium avium subsp. avium ATCC 25291] Length=284 Score = 328 bits (841), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 203/278 (74%), Positives = 240/278 (87%), Gaps = 1/278 (0%) Query 2 TTTSAPARNGTRRPSRPIVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGM 61 + T +PA TRRP RP+VLL+PVPG+S IH+LWAGTKLLVV G+SVLLTF+PGWVT+G+ Sbjct 5 SDTKSPAGR-TRRPPRPVVLLVPVPGTSKIHELWAGTKLLVVLGVSVLLTFFPGWVTVGL 63 Query 62 MAALVLAAARIAHIPRGALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALH 121 M AL++AAAR+AHIPRGALPS RW+WIVLA+G +TAAL G+PVV++ G+ +GLGG LH Sbjct 64 MLALLVAAARLAHIPRGALPSPRRWIWIVLAVGGITAALGAGSPVVSIAGLHIGLGGTLH 123 Query 122 FLRITALSVVLLALGAMVSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFP 181 FLR+TALS+VL+ LGAM+SWTTNVAE+ PA+ATLGRP R LRIP DEWAVALALALRAFP Sbjct 124 FLRVTALSIVLIGLGAMLSWTTNVAEMGPALATLGRPLRWLRIPSDEWAVALALALRAFP 183 Query 182 MLIDEFQVLYAARRLRPKRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITAR 241 MLI+EFQVLYAARRLRP + P SR+ARR++ AR++IDLL AAI VTLRRADEMGDAITAR Sbjct 184 MLIEEFQVLYAARRLRPNQTPHSRRARRRQQARDMIDLLTAAIVVTLRRADEMGDAITAR 243 Query 242 GGTGQLSAHPGRPKLADWVTLAITAMASGTAVAIESLI 279 GG GQLSA P RPKLADWVTL IT A VA++S+I Sbjct 244 GGIGQLSAAPARPKLADWVTLTITVAAGAIGVALDSMI 281 >gi|118466723|ref|YP_881298.1| cobalt transport protein [Mycobacterium avium 104] gi|118168010|gb|ABK68907.1| cobalt transport protein [Mycobacterium avium 104] Length=284 Score = 328 bits (841), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 205/277 (75%), Positives = 240/277 (87%), Gaps = 2/277 (0%) Query 3 TTSAPARNGTRRPSRPIVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMM 62 T SA R TRRP RP+VLL+PVPG+S IH+LWAGTKLLVV G+SVLLTF+PGWVT+G+M Sbjct 7 TKSAAGR--TRRPPRPVVLLVPVPGTSKIHELWAGTKLLVVLGVSVLLTFFPGWVTVGLM 64 Query 63 AALVLAAARIAHIPRGALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHF 122 AL++AAAR+AHIPRGALPS RW+WIVLA+G +TAAL G+PVV++ G+ +GLGG LHF Sbjct 65 LALLVAAARLAHIPRGALPSPRRWIWIVLAVGGITAALGAGSPVVSIAGLHIGLGGTLHF 124 Query 123 LRITALSVVLLALGAMVSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPM 182 LR+TALS+VL+ LGAM+SWTTNVAE+ PA+ATLGRP R LRIP DEWAVALALALRAFPM Sbjct 125 LRVTALSIVLIGLGAMLSWTTNVAEMGPALATLGRPLRWLRIPSDEWAVALALALRAFPM 184 Query 183 LIDEFQVLYAARRLRPKRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARG 242 LI+EFQVLYAARRLRP + P SR+ARR++ AR++IDLL AAI VTLRRADEMGDAITARG Sbjct 185 LIEEFQVLYAARRLRPNQTPRSRRARRRQQARDMIDLLTAAIVVTLRRADEMGDAITARG 244 Query 243 GTGQLSAHPGRPKLADWVTLAITAMASGTAVAIESLI 279 G GQLSA P RPKLADWVTLAIT A VA++S+I Sbjct 245 GIGQLSAAPARPKLADWVTLAITVAAGAIGVALDSMI 281 >gi|41408195|ref|NP_961031.1| hypothetical protein MAP2097c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396550|gb|AAS04414.1| hypothetical protein MAP_2097c [Mycobacterium avium subsp. paratuberculosis K-10] gi|336461712|gb|EGO40574.1| ABC-type cobalt transport system, permease component CbiQ [Mycobacterium avium subsp. paratuberculosis S397] Length=284 Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 204/277 (74%), Positives = 239/277 (87%), Gaps = 2/277 (0%) Query 3 TTSAPARNGTRRPSRPIVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMM 62 T SA R TRRP RP+VLL+PVPG+S IH+LWAGTKLLVV G+SVLLTF+PGWVT+G+M Sbjct 7 TQSAAGR--TRRPPRPVVLLVPVPGTSKIHELWAGTKLLVVLGVSVLLTFFPGWVTVGLM 64 Query 63 AALVLAAARIAHIPRGALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHF 122 AL++AAAR+AHIPRGALPS RW+WIVLA+G +TAAL G+PVV++ G+ +GLGG LHF Sbjct 65 LALLVAAARLAHIPRGALPSPRRWIWIVLAVGGITAALGAGSPVVSIAGLHIGLGGTLHF 124 Query 123 LRITALSVVLLALGAMVSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPM 182 LR+TALS+VL+ LGAM+SWTTNVAE+ PA+ATLGRP R LRIP DEWAVALALALRAFPM Sbjct 125 LRVTALSIVLIGLGAMLSWTTNVAEMGPALATLGRPLRWLRIPSDEWAVALALALRAFPM 184 Query 183 LIDEFQVLYAARRLRPKRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARG 242 LI+EFQVLYAARRLRP + P SR+ARR++ AR++IDLL AAI VTLRRADEMGDAITARG Sbjct 185 LIEEFQVLYAARRLRPNQTPRSRRARRRQQARDMIDLLTAAIVVTLRRADEMGDAITARG 244 Query 243 GTGQLSAHPGRPKLADWVTLAITAMASGTAVAIESLI 279 G GQLSA P RPKLADWVTL IT A VA++S+I Sbjct 245 GIGQLSAAPARPKLADWVTLTITVAAGAIGVALDSMI 281 >gi|145223318|ref|YP_001133996.1| cobalt transport protein [Mycobacterium gilvum PYR-GCK] gi|315443778|ref|YP_004076657.1| cobalt ABC transporter, permease CbiQ [Mycobacterium sp. Spyr1] gi|145215804|gb|ABP45208.1| cobalt transport protein [Mycobacterium gilvum PYR-GCK] gi|315262081|gb|ADT98822.1| ABC-type cobalt transport system, permease component CbiQ [Mycobacterium sp. Spyr1] Length=282 Score = 318 bits (815), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 178/270 (66%), Positives = 212/270 (79%), Gaps = 0/270 (0%) Query 13 RRPSRPIVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAARI 72 R+P R +VLL PVPG + +HDLWAG+KL++V I VLLTFYPGWV I +A LV+ AARI Sbjct 8 RKPRRQVVLLRPVPGRTPMHDLWAGSKLIIVAAIGVLLTFYPGWVPIAAVALLVVIAARI 67 Query 73 AHIPRGALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHFLRITALSVVL 132 A IPRG LPS+P WLW +L +G +TA AGGTP +VG + +GLGG L+FLRITALS+VL Sbjct 68 ARIPRGVLPSIPGWLWFLLLLGAVTATFAGGTPEFSVGSMTVGLGGLLNFLRITALSIVL 127 Query 133 LALGAMVSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLYA 192 L LGAMVSWTTNVAE++PAVA LGRP R LRIPVDEWAV +ALALRAFPMLIDEF VLYA Sbjct 128 LGLGAMVSWTTNVAEVAPAVAKLGRPLRPLRIPVDEWAVTIALALRAFPMLIDEFSVLYA 187 Query 193 ARRLRPKRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARGGTGQLSAHPG 252 ARRLRP + R+AR ++ A E+ID+LAAA+TV LRRADEMGDAITARGG GQ+SA P Sbjct 188 ARRLRPGDVDARRRARVRQWASEVIDMLAAAVTVALRRADEMGDAITARGGAGQISAVPS 247 Query 253 RPKLADWVTLAITAMASGTAVAIESLILHS 282 PK DW+ A+ G A+A+E IL + Sbjct 248 GPKRRDWIAFAVVLAVCGVALALELTILGT 277 >gi|333990227|ref|YP_004522841.1| hypothetical protein JDM601_1587 [Mycobacterium sp. JDM601] gi|333486195|gb|AEF35587.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=258 Score = 303 bits (775), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 193/264 (74%), Positives = 219/264 (83%), Gaps = 8/264 (3%) Query 19 IVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAARIAHIPRG 78 +VLL PVPG+SV+H LWAGTKLLVVFGISVLLTFYPGWVTIG + LV AAR+A IPRG Sbjct 1 MVLLRPVPGTSVVHRLWAGTKLLVVFGISVLLTFYPGWVTIGAVGLLVFTAARVARIPRG 60 Query 79 ALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHFLRITALSVVLLALGAM 138 ALPSVPRWLW++L +G TAA+AGG P GLGG L+FLRITALS+VLL LGAM Sbjct 61 ALPSVPRWLWVLLVVGGATAAMAGGEPA--------GLGGLLNFLRITALSIVLLGLGAM 112 Query 139 VSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLYAARRLRP 198 VSWTTNVAEI+PAVATLGRP R+LRIPVDEWAVALALALRAFPMLIDEF+VLYAAR LRP Sbjct 113 VSWTTNVAEIAPAVATLGRPLRLLRIPVDEWAVALALALRAFPMLIDEFRVLYAARGLRP 172 Query 199 KRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARGGTGQLSAHPGRPKLAD 258 K P +R+ RR+R ARE IDL+ AAITVTLRRADEMGDAITARGG GQ+SA P RPKLAD Sbjct 173 KTRPRTRRERRRRWAREAIDLITAAITVTLRRADEMGDAITARGGIGQISASPARPKLAD 232 Query 259 WVTLAITAMASGTAVAIESLILHS 282 V LA+ + G ++A+E +L + Sbjct 233 AVALALVTLTCGASLALELTVLTT 256 >gi|254776374|ref|ZP_05217890.1| hypothetical protein MaviaA2_17132 [Mycobacterium avium subsp. avium ATCC 25291] Length=960 Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 184/262 (71%), Positives = 213/262 (82%), Gaps = 3/262 (1%) Query 6 APARNGTRRPS---RPIVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMM 62 AP T+RP+ RP+VLL PVPGSS IH+LWAGTKLLVVF +S+LLT +PGWV IG+ Sbjct 680 APVTPPTKRPAARRRPVVLLRPVPGSSPIHELWAGTKLLVVFAMSLLLTVFPGWVAIGLA 739 Query 63 AALVLAAARIAHIPRGALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHF 122 AL A R+AHIPRG LPSVPRWLWI L + +TAALAGG P + +G LGLGG L F Sbjct 740 TALAAAGLRLAHIPRGVLPSVPRWLWIFLGVVGVTAALAGGAPTMHLGTASLGLGGLLDF 799 Query 123 LRITALSVVLLALGAMVSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPM 182 LR TAL+VVLL LGA+VSWTTNVA+I+PAVATLGRP RVLRIPVD+W+VALALALR FPM Sbjct 800 LRATALTVVLLGLGALVSWTTNVAQIAPAVATLGRPLRVLRIPVDDWSVALALALRTFPM 859 Query 183 LIDEFQVLYAARRLRPKRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARG 242 LIDEF+VLYAARRLRP+R +R AR +R A +LID++ A ITVTLRRADEMGDAITARG Sbjct 860 LIDEFRVLYAARRLRPRRPAQTRWARLRRPATDLIDVVVAVITVTLRRADEMGDAITARG 919 Query 243 GTGQLSAHPGRPKLADWVTLAI 264 GTGQ+SA P RPK DW+ L+I Sbjct 920 GTGQISADPSRPKRNDWIALSI 941 >gi|41409230|ref|NP_962066.1| hypothetical protein MAP3132 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398050|gb|AAS05680.1| hypothetical protein MAP_3132 [Mycobacterium avium subsp. paratuberculosis K-10] Length=960 Score = 292 bits (748), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 181/256 (71%), Positives = 211/256 (83%), Gaps = 3/256 (1%) Query 12 TRRPS---RPIVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLA 68 T+RP+ RP+VLL PVPGSS IH+LWAGTKLLVVF +S+LLT +PGWV +G+ AL A Sbjct 686 TKRPAARRRPVVLLRPVPGSSPIHELWAGTKLLVVFAMSLLLTVFPGWVAVGLATALAAA 745 Query 69 AARIAHIPRGALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHFLRITAL 128 R+AHIPRG LPSVPRWLWI L + +TAALAGG P + +G LGLGG L FLR TAL Sbjct 746 GLRLAHIPRGVLPSVPRWLWIFLGVVGVTAALAGGAPTIRLGTASLGLGGLLDFLRATAL 805 Query 129 SVVLLALGAMVSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQ 188 +VVLL LGA+VSWTTNVA+I+PAVATLGRP RVLRIPVD+W+VALALALR FPMLIDEF+ Sbjct 806 TVVLLGLGALVSWTTNVAQIAPAVATLGRPLRVLRIPVDDWSVALALALRTFPMLIDEFR 865 Query 189 VLYAARRLRPKRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARGGTGQLS 248 VLYAARRLRP+R +R AR +R A +LID++ A ITVTLRRADEMGDAITARGGTGQ+S Sbjct 866 VLYAARRLRPRRPAQTRWARLRRPATDLIDVVVAVITVTLRRADEMGDAITARGGTGQIS 925 Query 249 AHPGRPKLADWVTLAI 264 A P RPK DW+ L+I Sbjct 926 AAPSRPKRNDWIALSI 941 >gi|336459221|gb|EGO38166.1| ATPase component of various ABC-type transport systems [Mycobacterium avium subsp. paratuberculosis S397] Length=934 Score = 292 bits (747), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 181/256 (71%), Positives = 211/256 (83%), Gaps = 3/256 (1%) Query 12 TRRPS---RPIVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLA 68 T+RP+ RP+VLL PVPGSS IH+LWAGTKLLVVF +S+LLT +PGWV +G+ AL A Sbjct 660 TKRPAARRRPVVLLRPVPGSSPIHELWAGTKLLVVFAMSLLLTVFPGWVAVGLATALAAA 719 Query 69 AARIAHIPRGALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHFLRITAL 128 R+AHIPRG LPSVPRWLWI L + +TAALAGG P + +G LGLGG L FLR TAL Sbjct 720 GLRLAHIPRGVLPSVPRWLWIFLGVVGVTAALAGGAPTIRLGTASLGLGGLLDFLRATAL 779 Query 129 SVVLLALGAMVSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQ 188 +VVLL LGA+VSWTTNVA+I+PAVATLGRP RVLRIPVD+W+VALALALR FPMLIDEF+ Sbjct 780 TVVLLGLGALVSWTTNVAQIAPAVATLGRPLRVLRIPVDDWSVALALALRTFPMLIDEFR 839 Query 189 VLYAARRLRPKRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARGGTGQLS 248 VLYAARRLRP+R +R AR +R A +LID++ A ITVTLRRADEMGDAITARGGTGQ+S Sbjct 840 VLYAARRLRPRRPAQTRWARLRRPATDLIDVVVAVITVTLRRADEMGDAITARGGTGQIS 899 Query 249 AHPGRPKLADWVTLAI 264 A P RPK DW+ L+I Sbjct 900 AAPSRPKRNDWIALSI 915 >gi|118467064|ref|YP_883115.1| cobalt transport protein, putative [Mycobacterium avium 104] gi|118168351|gb|ABK69248.1| cobalt transport protein, putative [Mycobacterium avium 104] Length=451 Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 181/256 (71%), Positives = 210/256 (83%), Gaps = 3/256 (1%) Query 12 TRRPS---RPIVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLA 68 T+RP+ RP+VLL PVPGSS IH+LWAGTKLLVVF +S+LLT +PGWV IG+ AL A Sbjct 177 TKRPAARRRPVVLLRPVPGSSPIHELWAGTKLLVVFAMSLLLTVFPGWVAIGLATALAAA 236 Query 69 AARIAHIPRGALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHFLRITAL 128 R+AHIPRG LPSVPRWLWI L + +TAALAGG P + +G LGLGG L FLR TAL Sbjct 237 GLRLAHIPRGVLPSVPRWLWIFLGVVGVTAALAGGAPTIHLGTASLGLGGLLDFLRATAL 296 Query 129 SVVLLALGAMVSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQ 188 +VVLL LGA+VSWTTNVA+I+PAVA LGRP RVLRIPVD+W+VALALALR FPMLIDEF+ Sbjct 297 TVVLLGLGALVSWTTNVAQIAPAVAALGRPLRVLRIPVDDWSVALALALRTFPMLIDEFR 356 Query 189 VLYAARRLRPKRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARGGTGQLS 248 VLYAARRLRP+R +R AR +R A +LID++ A ITVTLRRADEMGDAITARGGTGQ+S Sbjct 357 VLYAARRLRPRRPAQTRWARLRRPATDLIDVVVAVITVTLRRADEMGDAITARGGTGQIS 416 Query 249 AHPGRPKLADWVTLAI 264 A P RPK DW+ L+I Sbjct 417 AAPSRPKRNDWIALSI 432 >gi|169628804|ref|YP_001702453.1| hypothetical protein MAB_1714 [Mycobacterium abscessus ATCC 19977] gi|169240771|emb|CAM61799.1| Conserved hypothetical protein (cobalt transport protein?) [Mycobacterium abscessus] Length=271 Score = 268 bits (685), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 158/269 (59%), Positives = 195/269 (73%), Gaps = 2/269 (0%) Query 12 TRRPSRPIVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAAR 71 TR P RP+VLL PVPG+S IH+LWAGTKL+ VF ISVLLTF+P W IG +AALV+ A Sbjct 4 TRAPRRPVVLLRPVPGTSTIHELWAGTKLIAVFLISVLLTFFPTWTAIGAVAALVILTAW 63 Query 72 IAHIPRGALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHFLRITALSVV 131 +AHIPRGA+P++P W+ ++ G LT +GG P +GG+ +G G L R TA++ V Sbjct 64 LAHIPRGAVPTIPIWMVALVIGGSLTVFFSGGPPFWHIGGLTIGFHGVLAVARTTAVAAV 123 Query 132 LLALGAMVSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLY 191 LL GAMVSWTTNV+EI+PAVA LGRP +V IPVDE A LALALR+FPML DEF+VL Sbjct 124 LLGTGAMVSWTTNVSEIAPAVAVLGRPLKVFGIPVDERAATLALALRSFPMLSDEFRVLI 183 Query 192 AARRLRPKRMPPSRKARRQRH-ARELIDLLAAAITVTLRRADEMGDAITARGGTGQLSAH 250 AARRLRP ++ R+ RR E +D+L AAIT LRRA EMGDAITARGGTGQ+SAH Sbjct 184 AARRLRPPQVREGRRGRRGLRWIAEAVDMLTAAITAALRRASEMGDAITARGGTGQISAH 243 Query 251 PGRPKLADWVTLAITAMASGTAVAIESLI 279 P RP L D + L + +A GTAV + ++ Sbjct 244 PARPGLNDAIAL-LLVIAVGTAVVLFEVL 271 >gi|169630227|ref|YP_001703876.1| hypothetical protein MAB_3145 [Mycobacterium abscessus ATCC 19977] gi|169242194|emb|CAM63222.1| Conserved hypothetical protein (cobalt transport?) [Mycobacterium abscessus] Length=258 Score = 246 bits (628), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 133/248 (54%), Positives = 176/248 (71%), Gaps = 6/248 (2%) Query 17 RPIVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAARIAHIP 76 RP++L+ PVPG S IH LWAGTKLL V ISVLLT P W IG++A L+L A +A I Sbjct 5 RPLMLMRPVPGPSPIHALWAGTKLLAVLAISVLLTITPSWPAIGLVALLILVTAGLAGIS 64 Query 77 RGALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHFLRITALSVVLLALG 136 +PSVPRW+W+++ G L + GG P + +G +G+GG L FLR+T+L +VL+ LG Sbjct 65 PRCIPSVPRWVWLLVVAGSLFTIVNGGAPELKLGPATIGVGGFLDFLRVTSLGLVLIGLG 124 Query 137 AMVSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLYAARRL 196 A++SWTT VA+I+PAVA L RP RVLR+PVD+WAV ++LA R FPML +EF++L AARRL Sbjct 125 AVISWTTQVADIAPAVALLCRPLRVLRVPVDDWAVTISLAFRMFPMLSEEFRLLAAARRL 184 Query 197 RPKRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARGGTGQLSAHPGRPKL 256 +P P + +RR E++DL AA+ V+LRRA EMGDAITARGG G++SAH P Sbjct 185 QPPA--PEKPSRRA----EVVDLCTAAMVVSLRRATEMGDAITARGGAGRISAHTVYPGW 238 Query 257 ADWVTLAI 264 D + A+ Sbjct 239 RDAIAAAV 246 >gi|262200191|ref|YP_003271399.1| cobalt transporter [Gordonia bronchialis DSM 43247] gi|262083538|gb|ACY19506.1| cobalt transport protein [Gordonia bronchialis DSM 43247] Length=249 Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 118/253 (47%), Positives = 159/253 (63%), Gaps = 20/253 (7%) Query 25 VPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAARIAHIPRGALPSVP 84 VPG S +H LWAGTKLL+V + V+ P W +GM+AA+V+ A IA IP GALP P Sbjct 11 VPGDSFVHRLWAGTKLLIVLILGVMTWVLPSWPALGMVAAVVVITALIAGIPLGALPRPP 70 Query 85 RWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHFLRITALSVVLLALGAMVSWTTN 144 W W ++A+G VAV GL + FLR L +VL+A +V WTT Sbjct 71 WWFWGLIALG------------VAVNA-SFGLAAVVVFLRAVVLGLVLVASSILVIWTTP 117 Query 145 VAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLYAARRLRPKRMPPS 204 +AE++PA+A L RP R+LR+PVDEWAVA+AL LR PMLIDE ++L AA RLR P+ Sbjct 118 MAEVAPALAKLMRPLRMLRLPVDEWAVAIALCLRGLPMLIDELRMLRAAHRLR-----PT 172 Query 205 RKARRQRHAREL--IDLLAAAITVTLRRADEMGDAITARGGTGQLSAHPGRPKLADWVTL 262 K R + E+ +D++ AA++ LRR+ EM +AITARGGTG+L+A+P P AD V L Sbjct 173 AKGRSDHPSAEMGIMDMITAAMSSALRRSAEMAEAITARGGTGRLTAYPSGPGRADAVAL 232 Query 263 AITAMASGTAVAI 275 + +A A+ + Sbjct 233 VVIGLACAVAITL 245 >gi|336178874|ref|YP_004584249.1| ABC transporter-like protein [Frankia symbiont of Datisca glomerata] gi|334859854|gb|AEH10328.1| ABC transporter related protein [Frankia symbiont of Datisca glomerata] Length=1306 Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 114/257 (45%), Positives = 158/257 (62%), Gaps = 8/257 (3%) Query 7 PARNGTRRPSRPIVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALV 66 PAR+G R + P +L +PG + +H LWAGTKL+++ + VL+ P W IGM+ V Sbjct 1036 PARHGRR--TEPNLLRY-IPGDTPVHRLWAGTKLIIMALLDVLVAVRPSWPVIGMIVGFV 1092 Query 67 LAAARIAHIPRGALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHFLRIT 126 + IA IP GA P +PRW W L IG L A + P V VGGV+L +GG L +LR+T Sbjct 1093 GLSMIIARIPVGAAPRLPRWFWYGLLIGVLLTAQSHAAPFVTVGGVRLSVGGMLDWLRLT 1152 Query 127 ALSVVLLALGAMVSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDE 186 + S+ + A A++ WTT ++E++PA+ L P R LR+P+DEW +AL++R P+L+DE Sbjct 1153 SASMTMFAAAALLGWTTPLSELAPALGRLLEPLRRLRLPIDEWVATVALSIRCLPLLVDE 1212 Query 187 FQVLYAARRLR-----PKRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITAR 241 ++L A RRLR P R P R A HAR + +LL AI LRRA EM +AI AR Sbjct 1213 IRMLLAVRRLRVGARPPCRRLPGRLAALPLHARSITELLCTAIVTCLRRAAEMTEAIAAR 1272 Query 242 GGTGQLSAHPGRPKLAD 258 GG G ++ P RP+ D Sbjct 1273 GGFGAVAHQPARPRRVD 1289 >gi|343926289|ref|ZP_08765798.1| putative ABC transporter permease protein [Gordonia alkanivorans NBRC 16433] gi|343763918|dbj|GAA12724.1| putative ABC transporter permease protein [Gordonia alkanivorans NBRC 16433] Length=250 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 120/258 (47%), Positives = 166/258 (65%), Gaps = 20/258 (7%) Query 25 VPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAARIAHIPRGALPSVP 84 VPG S +H LWAGTKL++V + ++ P W +GM+AA+V+ A IA IP GA+P P Sbjct 11 VPGDSFVHRLWAGTKLVIVLILGIMTWVLPSWPALGMVAAIVILTALIAGIPLGAIPRPP 70 Query 85 RWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHFLRITALSVVLLALGAMVSWTTN 144 W W ++ +G VA GL G L FLR L++VL+A +V WTT Sbjct 71 WWFWGLIGVG------------VAFNVSFAGLHGGLVFLRAVTLALVLVASSILVIWTTP 118 Query 145 VAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLYAARRLRPKRMPPS 204 +A+++PA+A L RP R LR+PVDEWAVA+AL LR P+LI+E ++L AA +LR P+ Sbjct 119 MADVAPAIARLMRPLRRLRLPVDEWAVAIALCLRGLPLLIEELRMLRAAHKLR-----PT 173 Query 205 RKARRQRHAREL--IDLLAAAITVTLRRADEMGDAITARGGTGQLSAHPGRPKLADWVTL 262 K R + E+ +DL+ AA++ LRR+ EM +AITARGGTG+L+AHP RP AD + L Sbjct 174 AKGRSDHPSAEMGIMDLITAAMSSALRRSAEMAEAITARGGTGRLTAHPARPGRADLLAL 233 Query 263 AITAMASGTAVAIESLIL 280 + A+A G AVA+ +LIL Sbjct 234 IVIAIACGVAVAV-TLIL 250 >gi|226306175|ref|YP_002766135.1| ABC transporter permease protein [Rhodococcus erythropolis PR4] gi|226185292|dbj|BAH33396.1| putative ABC transporter permease protein [Rhodococcus erythropolis PR4] Length=244 Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 106/255 (42%), Positives = 159/255 (63%), Gaps = 19/255 (7%) Query 21 LLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAARIAHIPRGAL 80 LL VP SS IH LWAGTK++ V +S+++ P W IG++ L+L A I IP A+ Sbjct 4 LLREVPTSSPIHRLWAGTKIVAVVLVSIVVVAAPSWPAIGVVLGLLLLTAVIGRIPPTAV 63 Query 81 PSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHFLRITALSVVLLALGAMVS 140 P P WLW ++ +G A+ + +G+ +L+ +VLL + M++ Sbjct 64 PRPPWWLWALILLG-------------ALINLPIGIDAVFIYLQAVTFGLVLLCVSLMLA 110 Query 141 WTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLYAARRLRPKR 200 WTT++++++PA+ATLGRP R+ +IPVDEWA+A AL +R+ P+LIDE L AARRLRPK Sbjct 111 WTTSMSDVAPALATLGRPLRIFKIPVDEWAIATALCIRSLPLLIDEMLTLVAARRLRPKA 170 Query 201 MPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARGGTGQLSAHPGRPKLADWV 260 + S ++DL+ ++V +RR+ EMG+AI+ARGGTG ++A+P RP+LAD Sbjct 171 VVNSAA------DNSIVDLITTTMSVAIRRSAEMGEAISARGGTGLIAAYPKRPQLADLF 224 Query 261 TLAITAMASGTAVAI 275 L + A +AVA+ Sbjct 225 ALTVVIAACVSAVAL 239 >gi|229490874|ref|ZP_04384709.1| cobalt transport protein [Rhodococcus erythropolis SK121] gi|229322264|gb|EEN88050.1| cobalt transport protein [Rhodococcus erythropolis SK121] Length=244 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 107/255 (42%), Positives = 158/255 (62%), Gaps = 19/255 (7%) Query 21 LLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAARIAHIPRGAL 80 LL VP SS IH LWAGTK++ V +S+++ P W IG++ L+L A I IP A+ Sbjct 4 LLREVPTSSPIHRLWAGTKIVAVVLVSIVVVTAPSWPAIGVVLGLLLLTAVIGRIPPTAV 63 Query 81 PSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHFLRITALSVVLLALGAMVS 140 P P WLW ++ +G A+ + +GL +L+ +VLL + M++ Sbjct 64 PRPPWWLWALILLG-------------ALINLPIGLDAVFIYLQAVTFGLVLLCVSLMLA 110 Query 141 WTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLYAARRLRPKR 200 WTT++++++PA+ATLGRP R L+IPVDEWA+A AL +R+ P+LIDE L AARRLRPK Sbjct 111 WTTSMSDVAPALATLGRPLRFLKIPVDEWAIATALCIRSLPLLIDEMLTLVAARRLRPKA 170 Query 201 MPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARGGTGQLSAHPGRPKLADWV 260 + S ++DL+ ++V +RR+ EMG+AI+ARGGTG ++A+P RP+LAD Sbjct 171 VVNSAA------DNSIVDLITTTMSVAIRRSAEMGEAISARGGTGLIAAYPKRPQLADLF 224 Query 261 TLAITAMASGTAVAI 275 L + A +AV + Sbjct 225 ALTVVIAACVSAVVL 239 >gi|326384361|ref|ZP_08206042.1| cobalt transport protein [Gordonia neofelifaecis NRRL B-59395] gi|326196959|gb|EGD54152.1| cobalt transport protein [Gordonia neofelifaecis NRRL B-59395] Length=249 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 100/262 (39%), Positives = 161/262 (62%), Gaps = 15/262 (5%) Query 19 IVLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAARIAHIPRG 78 I +L +PG S +H LWAG+KL+++F + ++ P W +G +A ++ +A IP G Sbjct 3 IPMLREIPGDSPVHRLWAGSKLIIIFVLGLMTWVLPSWPGLGFVAVCLVVFVLVAKIPLG 62 Query 79 ALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHFLRITALSVVLLALGAM 138 ALP P W W ++A+ + + +A G+ G + LR L ++++++ + Sbjct 63 ALPRPPWWFWGLMALTVVWSWIARGS------------DGGITALRGVLLGLLVVSMSVL 110 Query 139 VSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLYAARRLRP 198 V WTT +AE++PA+A L P R+LR+PVDEWAV +ALALR P+L++E ++L+AA RLRP Sbjct 111 VIWTTPMAELAPALARLMSPLRILRLPVDEWAVTIALALRGLPLLVEEMRLLWAAHRLRP 170 Query 199 KRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARGGTGQLSAHPGRPKLAD 258 + S + ++D++ AA++ +RR+ EM +AITARGGTG+L+A+P RP D Sbjct 171 RS---SSDSGHPSAELSVLDIIVAAMSSAMRRSSEMAEAITARGGTGRLTAYPSRPGRVD 227 Query 259 WVTLAITAMASGTAVAIESLIL 280 V L + A+A AV + + L Sbjct 228 AVVLTVFAVACAGAVTVSVIYL 249 >gi|21104322|emb|CAC85368.1| hypothetical protein [Gordonia sp. Kb2] Length=264 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 109/236 (47%), Positives = 150/236 (64%), Gaps = 19/236 (8%) Query 25 VPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAARIAHIPRGALPSVP 84 VPG S +H LWAGTKL++V + ++ P W +GM+AA+V+ A +A IP GA+P P Sbjct 25 VPGDSFVHRLWAGTKLVIVLILGIMTWVLPSWPALGMVAAIVILTALLAGIPLGAIPRPP 84 Query 85 RWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHFLRITALSVVLLALGAMVSWTTN 144 W W ++ IG VA GL GAL LR L++VL+A +V WTT Sbjct 85 WWFWGLIGIG------------VAFNASFAGLHGALIVLRAITLALVLVASSILVIWTTP 132 Query 145 VAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLYAARRLRPKRMPPS 204 +A+++PA+A L RP R LR+PV+EWAVA+AL +R P+LI+E VL AA RLR P+ Sbjct 133 MADVAPALARLMRPLRRLRLPVNEWAVAIALCMRGLPLLIEELAVLRAAHRLR-----PT 187 Query 205 RKARRQRHAREL--IDLLAAAITVTLRRADEMGDAITARGGTGQLSAHPGRPKLAD 258 K R + E+ +DL+ AA++ LRR+ EM +AITARGGTG+L+AHP RP +D Sbjct 188 AKGRSDHPSAEMGIMDLITAAMSSALRRSAEMAEAITARGGTGRLTAHPARPGRSD 243 >gi|54022647|ref|YP_116889.1| putative ABC transporter [Nocardia farcinica IFM 10152] gi|54014155|dbj|BAD55525.1| putative ABC transporter [Nocardia farcinica IFM 10152] Length=245 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 115/262 (44%), Positives = 160/262 (62%), Gaps = 22/262 (8%) Query 20 VLLIPVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAARIAHIPRGA 79 VLL VP S +H LWAGTK++ F IS+LL +P W +G+M A ++A +A +P G Sbjct 4 VLLRQVPVDSPVHRLWAGTKMVGAFLISLLLMLWPSWPVLGVMIAFLIAIGVVARLPLGT 63 Query 80 LPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGA--LHFLRITALSVVLLALGA 137 LP +P W W ++A G L V L +GGA L + ++ VL+ Sbjct 64 LPRLPWWFWGLIAAGAL---------------VNLPMGGAAVLRYAQVVVFGFVLVTASF 108 Query 138 MVSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLYAARRLR 197 +++WTT + E++PA+A LG P R L++PVDEWAV +AL LR P+L++E +VL AARRLR Sbjct 109 LIAWTTPMGEVAPALARLGAPLRKLKVPVDEWAVVVALTLRGLPLLLEEIRVLRAARRLR 168 Query 198 PKRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARGGTGQLSAHPGRPKLA 257 PK R R + LID+L AA+ V RRA E+G+AITARGGTG+L+AHP P Sbjct 169 PKE----RLLDRATDS-PLIDILTAAMAVASRRATELGEAITARGGTGELTAHPATPTRR 223 Query 258 DWVTLAITAMASGTAVAIESLI 279 D V LA+ +A AV ++ L+ Sbjct 224 DAVALAVVLLACAGAVVVDLLV 245 >gi|320095167|ref|ZP_08026874.1| hypothetical protein HMPREF9005_1486 [Actinomyces sp. oral taxon 178 str. F0338] gi|319977914|gb|EFW09550.1| hypothetical protein HMPREF9005_1486 [Actinomyces sp. oral taxon 178 str. F0338] Length=256 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 70/233 (31%), Positives = 115/233 (50%), Gaps = 19/233 (8%) Query 13 RRPSRPIVLLIP--VPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAA 70 R+P R +P +P S + +W GT ++ ++ + P W T+G +AA+++AA Sbjct 5 RKPRRSAGFTLPRALPWPSFLSRVWPGTLIVCWTALTTFVITIPTWATLGAVAAVLVAAT 64 Query 71 RIAHIPRGALPSVPRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHFLRITALSV 130 + +P GALP P WLW G A L G V FLR +++++ Sbjct 65 ALLRVPAGALPRPPVWLWSGFIGGCAGAWLGEGVEV---------------FLRASSVAL 109 Query 131 VLLALGAMVSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVL 190 +++ +++ W A ++ A+ P R++ PVDEWA+ + ALR PML D+ + Sbjct 110 IVVWGSSLLLWAVPTAAMAGALRVFLAPLRLVGAPVDEWALIMGEALRGMPMLRDQAGAV 169 Query 191 YAARRLRPKRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARGG 243 RLR S R +AR ID++ A+++ R A E G A++ RGG Sbjct 170 MDTVRLRLGDEMASMSMR--GYARLAIDVVTASLSAASRGAAETGRAMSMRGG 220 >gi|293193987|ref|ZP_06609907.1| putative cobalt transport protein [Actinomyces odontolyticus F0309] gi|292819806|gb|EFF78814.1| putative cobalt transport protein [Actinomyces odontolyticus F0309] Length=222 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 67/222 (31%), Positives = 107/222 (49%), Gaps = 18/222 (8%) Query 46 ISVLLTFYPGWVTIGMMAALVLAAARIAHIPRGALPSVPRWLWIVLAIGFLTAALAGGTP 105 ++ + P W T+ ++ L+L A+ + +P P P W GF+ L Sbjct 2 LTTCVILLPRWSTLAIVGGLLLVASLVVRLPLSVAPRPPMWF----VSGFIGGCL----- 52 Query 106 VVAVGGVQLGLGGALHFLRITALSVVLLALGAMVSWTTNVAEISPAVATLGRPFRVLRIP 165 G LG G L FLR++ L++V+L +++W T A ++ A+ RP R+L P Sbjct 53 -----GAWLGDGLEL-FLRVSTLALVVLWGSGLIAWVTPTASLAAALRFFLRPLRLLGAP 106 Query 166 VDEWAVALALALRAFPMLIDEFQVLYAARRLRPKRMPPSRKARRQRHARELIDLLAAAIT 225 VD+W++ +A ALR PML D+ Q + +LR + + R AR +D++ A ++ Sbjct 107 VDQWSLVMASALRGLPMLRDQAQAVLDTAKLRLGQDMATLSLR--GSARLSVDVITAILS 164 Query 226 VTLRRADEMGDAITARGG-TGQLSAHPGRPKLADWVTLAITA 266 T R A E G A++ RG Q A G WV A+ A Sbjct 165 ATSRGAAETGRAMSMRGSIEAQDGATRGARVRLGWVDAAVIA 206 >gi|154508293|ref|ZP_02043935.1| hypothetical protein ACTODO_00789 [Actinomyces odontolyticus ATCC 17982] gi|153797927|gb|EDN80347.1| hypothetical protein ACTODO_00789 [Actinomyces odontolyticus ATCC 17982] Length=222 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 67/222 (31%), Positives = 107/222 (49%), Gaps = 18/222 (8%) Query 46 ISVLLTFYPGWVTIGMMAALVLAAARIAHIPRGALPSVPRWLWIVLAIGFLTAALAGGTP 105 ++ + P W T+ ++ L+L A+ + +P P P W GF+ L Sbjct 2 LTTCVILSPRWSTLAIVGGLLLVASLVVRLPLSVAPRPPMWF----VSGFIGGCL----- 52 Query 106 VVAVGGVQLGLGGALHFLRITALSVVLLALGAMVSWTTNVAEISPAVATLGRPFRVLRIP 165 G LG G L FLR++ L++V+L +++W T A ++ A+ RP R+L P Sbjct 53 -----GAWLGDGLEL-FLRVSTLALVVLWGSGLIAWVTPTASLADALRFFLRPLRLLGAP 106 Query 166 VDEWAVALALALRAFPMLIDEFQVLYAARRLRPKRMPPSRKARRQRHARELIDLLAAAIT 225 VD+W++ +A ALR PML D+ Q + +LR + + R AR +D++ A ++ Sbjct 107 VDQWSLVMASALRGLPMLRDQAQAVLDTAKLRLGQDMAALSLR--GSARLSVDVITAILS 164 Query 226 VTLRRADEMGDAITARGG-TGQLSAHPGRPKLADWVTLAITA 266 T R A E G A++ RG Q A G WV A+ A Sbjct 165 ATSRGAAETGRAMSMRGSIEAQDGATRGARVRLGWVDAAVIA 206 >gi|310659468|ref|YP_003937189.1| ybaf [Clostridium sticklandii DSM 519] gi|308826246|emb|CBH22284.1| YbaF [Clostridium sticklandii] Length=267 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 71/257 (28%), Positives = 118/257 (46%), Gaps = 13/257 (5%) Query 26 PGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAARIAHIPRGALPSVPR 85 P S+IH L K+L F + L + ++ A +L +++ IP + + Sbjct 12 PTDSIIHRLDPRVKILFTFIFMISLFVINTFAPYALILAFLLVIIKVSKIPLKYILKGLK 71 Query 86 WLWIVLAIGF-LTAALAGGTPVVAVGGVQLGLGGALH--FLRITALSVVLLALG-AMVSW 141 LWI+L + F + A L+ G P+ + G ++L G F+ L +V L +G ++++ Sbjct 72 PLWILLILTFSINAFLSPGEPIWSFGFLKLTREGVTQGSFM---LLRLVFLIIGTSVLTL 128 Query 142 TTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLYAARRLRPKRM 201 T E++ + L P RV+++P E A+ + +ALR P L+DE + A+ R Sbjct 129 ATAPIELTDGIEKLLNPLRVIKVPAHELAMMMTIALRFIPTLLDETDKIMKAQMARGADF 188 Query 202 PPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITA---RGGTGQLSAHPGRPKLAD 258 +R A+ LI LL RRADE+ A+ A RGG G+ D Sbjct 189 ESKNMIKR---AKGLIPLLVPLFISAFRRADELAMAMEARCYRGGDGRTRMKEINFSTKD 245 Query 259 WVTLAITAMASGTAVAI 275 +V I + G VA+ Sbjct 246 YVASTIIVIYLGVIVAM 262 >gi|339498021|ref|ZP_08658997.1| ABC-type cobalt transport system, permease component CbiQ related transporter [Leuconostoc pseudomesenteroides KCTC 3652] Length=267 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 64/220 (30%), Positives = 110/220 (50%), Gaps = 5/220 (2%) Query 25 VPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAARIAHIP-RGALPSV 83 VPGSS +H L TK++V F ++ F W T + A V+ A R+ P + + Sbjct 10 VPGSSWVHRLDPRTKMIVTFVFIFVMLFASSWGTYALSAVFVVLAIRLTQQPFKLYWDGL 69 Query 84 PRWLWIVLAIGFLTAALAGGTPVVA-VGGVQLGLGGALHFLRITALSVVLLALGAMVSWT 142 W++L L L GTPVV VG +Q+ G L+ + + +++ + +++ + Sbjct 70 KPIFWLILFTVVLQLFLTPGTPVVLHVGPLQVTWPGILNAIYVMIRFTLIILMSTIMTLS 129 Query 143 TNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLYAARRLRPKRMP 202 T I+ A+ +L P + +PV E A+ L++ALR P+L+DE Q + A++ R Sbjct 130 TPPTSIANALESLLAPLNKIHVPVAELALMLSIALRFVPLLMDETQKIMNAQKSRGMSFS 189 Query 203 PSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARG 242 +R AR ++ LL L+RA ++ +A+ RG Sbjct 190 TGGPIKR---ARAIVPLLIPLFVGALQRALDLANAMEIRG 226 >gi|299144418|ref|ZP_07037498.1| cobalt transport family protein [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518903|gb|EFI42642.1| cobalt transport family protein [Peptoniphilus sp. oral taxon 386 str. F0131] Length=265 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 62/245 (26%), Positives = 115/245 (47%), Gaps = 9/245 (3%) Query 26 PGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAARIAHIPRG-ALPSVP 84 P +SVIH L TK++V+ V + F + ++ A + +++H+P L V Sbjct 12 PSNSVIHKLDPRTKIIVMLLFIVGIFFVNSYTPYLLVGAYLFMVIKLSHVPFSMVLRGVK 71 Query 85 RWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHFLRITALSVVLLALG-AMVSWTT 143 WI++ + G + +G +++ G +H A+ ++LL +G +M+++TT Sbjct 72 PLKWILIITFVVNVLFMPGDILYKIGFIKITSQG-IHMAIKMAIRLMLLVMGTSMLTFTT 130 Query 144 NVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLYAARRLRPKRMPP 203 + E++ + L +P + + +P E A+ + +ALR P L++E + A+ R Sbjct 131 SPIEMTDGIEELLKPMKKIGVPAHEIAMMMTIALRFIPTLVEETDKIMKAQMARGADFES 190 Query 204 SRKARRQRHARELIDLLAAAITVTLRRADEMGDAITA---RGGTGQLSAHPGRPKLADWV 260 R A+ L+ LL + RRADE+ A+ A RGG G+ K D + Sbjct 191 GNVLNR---AKNLVPLLVPLFINSFRRADELATAMEARCYRGGEGRTKFKELSYKKIDSI 247 Query 261 TLAIT 265 A+ Sbjct 248 AFALN 252 >gi|333398833|ref|ZP_08480646.1| ECF transporter energy-coupling factor T [Leuconostoc gelidum KCTC 3527] Length=268 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 63/220 (29%), Positives = 114/220 (52%), Gaps = 5/220 (2%) Query 25 VPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAARIAHIP-RGALPSV 83 VPG+S +H L TK++V F +++ + W T AA V+A ++ P + + Sbjct 10 VPGNSWVHRLDPRTKMIVTFVYIIVMLWANNWQTYAWTAAFVVALVKLTDQPFKLYWDGL 69 Query 84 PRWLWIVLAIGFLTAALAGGTPVV-AVGGVQLGLGGALHFLRITALSVVLLALGAMVSWT 142 W++L L GTP++ +VG Q+ + G L+ + + V+++ + +++ T Sbjct 70 KPIFWLILFTVILQLLFTPGTPILFSVGPFQVTVPGILNAIYVMVRFVLIILMSTILTLT 129 Query 143 TNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLYAARRLRPKRMP 202 T I+ A+ +L PF+ + +PV E A+ LA+ALR P+L+DE Q + A++ R Sbjct 130 TPPTSIANALESLLSPFKKIGVPVAELALMLAIALRFVPLLMDEMQKIMNAQKSRGMSFS 189 Query 203 PSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARG 242 +R A+ +I LL L+RA ++ +A+ RG Sbjct 190 TGGPIKR---AKAIIPLLIPLFIGALQRALDLANAMEVRG 226 >gi|296140187|ref|YP_003647430.1| ABC transporter [Tsukamurella paurometabola DSM 20162] gi|296028321|gb|ADG79091.1| ABC transporter related protein [Tsukamurella paurometabola DSM 20162] Length=944 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 80/248 (33%), Positives = 122/248 (50%), Gaps = 9/248 (3%) Query 24 PVPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAARIAHIPRGALPSV 83 P+P + +W GTKL V+ V++ W IG A ++L +A P A+P + Sbjct 686 PLPQENTARSVWVGTKLAVLLATGVVMAVRTDWWNIGAAALIMLGWFLLAGAPWRAIPKL 745 Query 84 PRWLWIVLAIGFLTAALAGGTPVVAVGGVQLGLGGALHFLRITALSVVLLALGAMVSWTT 143 P + AI A+L G + V G+Q L G FLR +V L + WTT Sbjct 746 PPFFLAFGAISLWLASLGDGATGITVLGIQFSLSGIDVFLRGLVSVMVSLFAALLFCWTT 805 Query 144 NVAEISPAVAT-LGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLYA-ARRLRPKRM 201 + ++ + T L R V + V +A +LALA+R P+ + E + ++ AR+ RP R Sbjct 806 PLGDVPGFLQTCLNRLGGVGKRGV-AFASSLALAIRLAPLALSEVRTMWGLARQRRPLR- 863 Query 202 PPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARGGTGQLSAHPGRP--KLADW 259 + R +++LL A + RRA E+ DAIT+RGG G + A P R +L Sbjct 864 --ANGKPRGVSIEAILELLLLATVQSCRRAGELADAITSRGGLG-VVARPDRGPRRLDGV 920 Query 260 VTLAITAM 267 V LA+TA+ Sbjct 921 VVLAVTAI 928 >gi|339625096|ref|ZP_08660885.1| ABC-type cobalt transport system, permease component CbiQ related transporter [Fructobacillus fructosus KCTC 3544] Length=266 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 65/224 (30%), Positives = 115/224 (52%), Gaps = 13/224 (5%) Query 25 VPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTI-----GMMAALVLAAARIAHIPRGA 79 VPGS +++ L TK+L+ LL F W T ++ ALVL + RG Sbjct 10 VPGSGILYKLDPRTKILMTIAYVFLLVFANSWPTYLWSAAFLLMALVLTKQGLGLYWRGI 69 Query 80 LPSVPRWLWIVLAIGFLTAALAGGTPVV-AVGGVQLGLGGALHFLRITALSVVLLALGAM 138 P LW++L L +GGTPV+ A G V++ L G ++ + V+++ + + Sbjct 70 KPI----LWLILFTVVLQLLFSGGTPVLFAFGPVKVTLPGLINAFYVVVRFVLIVLMSTI 125 Query 139 VSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLYAARRLRP 198 ++ TT I+ A+ +L +P +V+++PV E A+ L++ALR P+L+ E + A++ R Sbjct 126 LTITTPPTAIASAIESLLKPLKVVKVPVSELALMLSIALRFVPLLMGETDKIMKAQKSRG 185 Query 199 KRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARG 242 + +R A+ ++ LL L+RA ++ +A+ RG Sbjct 186 MSLSTGSLIKR---AKAVVPLLVPLFVGALQRALDLANAMEVRG 226 >gi|300174000|ref|YP_003773166.1| ECF transporter energy-coupling factor T [Leuconostoc gasicomitatum LMG 18811] gi|334305762|sp|D8MHM9.1|ECFT_LEUGT RecName: Full=Energy-coupling factor transporter transmembrane protein EcfT; Short=ECF transporter T component EcfT gi|299888379|emb|CBL92347.1| Energy-coupling factor T of ECF transporters [Leuconostoc gasicomitatum LMG 18811] Length=268 Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 63/220 (29%), Positives = 113/220 (52%), Gaps = 5/220 (2%) Query 25 VPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAARIAHIP-RGALPSV 83 VPG+S IH L TK++V F +++ + W T AA V+A ++ P + + Sbjct 10 VPGNSWIHRLDPRTKMIVTFVYIIVMLWASNWQTYAWTAAFVVAMVKLTDQPFKLYWDGL 69 Query 84 PRWLWIVLAIGFLTAALAGGTPVV-AVGGVQLGLGGALHFLRITALSVVLLALGAMVSWT 142 W++L L GTP++ +VG Q+ + G L+ + + V+++ + +++ T Sbjct 70 KPIFWLILFTVILQLLFTPGTPILFSVGPFQVTVPGILNAIYVMVRFVLIILMSTILTLT 129 Query 143 TNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLYAARRLRPKRMP 202 T I+ A+ +L P + + +PV E A+ LA+ALR P+L+DE Q + A++ R Sbjct 130 TPPTSIANALESLLSPLKKIGVPVAELALMLAIALRFVPLLMDEMQKIMNAQKSRGMSFS 189 Query 203 PSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARG 242 +R A+ +I LL L+RA ++ +A+ RG Sbjct 190 TGGPIKR---AKAIIPLLIPLFIGALQRALDLANAMEVRG 226 >gi|330718941|ref|ZP_08313541.1| ABC-type cobalt transport system, permease component CbiQ related transporter [Leuconostoc fallax KCTC 3537] Length=266 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 64/247 (26%), Positives = 120/247 (49%), Gaps = 7/247 (2%) Query 25 VPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAARIAHIP-RGALPSV 83 VPG SV+H L TK++ F +L+ + W T + A V + P + + + Sbjct 10 VPGKSVVHQLDPRTKIIGTFVFILLMLWANTWSTYLVAAIFVWFTILLTQQPLKMYIDGL 69 Query 84 PRWLWIVLAIGFLTAALAGGTPVVA-VGGVQLGLGGALHFLRITALSVVLLALGAMVSWT 142 W++ L GGTPV+ G +++ L G ++ L + V+++ + +++ T Sbjct 70 KPIFWLLAFTIVLQIFFTGGTPVLLHFGFIKVTLPGVINALFVMFRFVLIILMSTIMTLT 129 Query 143 TNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLYAARRLRPKRMP 202 T I+ A+ +L +P + L++PV E A+ L++ALR P+L+DE Q + A++ R Sbjct 130 TPPTSIANALESLLKPLKSLKVPVAEMALMLSIALRFVPLLMDETQKIMNAQKSRGMSFS 189 Query 203 PSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARGGTGQLSAHPGRPKLADWVTL 262 +R A+ ++ LL L+RA ++ +A+ RG + H + ++ + Sbjct 190 TGGPVKR---AKAIVPLLIPLFVGALQRALDLANAMEVRGFKD--AEHRTKYRILKYKKQ 244 Query 263 AITAMAS 269 A AS Sbjct 245 DYQAFAS 251 >gi|333447374|ref|ZP_08482316.1| ECF transporter energy-coupling factor T [Leuconostoc inhae KCTC 3774] Length=260 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/220 (29%), Positives = 113/220 (52%), Gaps = 5/220 (2%) Query 25 VPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAARIAHIP-RGALPSV 83 VPG+S IH L TK++V F +++ + W T AA V+A ++ P + + Sbjct 10 VPGNSWIHRLDPRTKMIVTFVYIIVMLWASNWQTYAWTAAFVVAMVKLTDQPFKLYWDGL 69 Query 84 PRWLWIVLAIGFLTAALAGGTPVV-AVGGVQLGLGGALHFLRITALSVVLLALGAMVSWT 142 W++L L GTP++ +VG Q+ + G L+ + + V+++ + +++ T Sbjct 70 KPIFWLILFTVILQLLFTPGTPILFSVGPFQVTVPGILNAIYVMVRFVLIILMSTILTLT 129 Query 143 TNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLYAARRLRPKRMP 202 T I+ A+ +L P + + +PV E A+ LA+ALR P+L+DE Q + A++ R Sbjct 130 TPPTSIANALESLLSPLKKIGVPVAELALMLAIALRFVPLLMDEMQKIMNAQKSRGMSFS 189 Query 203 PSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARG 242 +R A+ +I LL L+RA ++ +A+ RG Sbjct 190 TGGPIKR---AKAIIPLLIPLFIGALQRALDLANAMEVRG 226 >gi|116874000|ref|YP_850781.1| cobalt transport protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742878|emb|CAK22002.1| cobalt transport protein [Listeria welshimeri serovar 6b str. SLCC5334] Length=266 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/227 (28%), Positives = 106/227 (47%), Gaps = 13/227 (5%) Query 25 VPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAARIAHIP-RGALPSV 83 VPG S+IH L A TKLL F +L W T +M L ++ I + + V Sbjct 11 VPGESLIHGLDARTKLLAGFYYIGILFLANNWWTYALMVVFTLMVIQMTGIKLKVFIKGV 70 Query 84 PRWLWIVLAIGFLTAALA-GGTPVVAVGGVQLG----LGGALHFLRITALSVVLLALGAM 138 +W++L + A GGT G + L G FLR V+++ + + Sbjct 71 KPLIWLILFTVVMQILFASGGTIYFDWGPFTISSFGLLNGVFVFLRF----VLIIMMSTV 126 Query 139 VSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLYAARRLRP 198 ++ TT ++ A+A + RPF VL++PV++ A+ +++ALR P L+ E + A+R R Sbjct 127 ITLTTTPMNLTDAIAYILRPFAVLKVPVNDIALMISVALRFIPTLMGETDKIMKAQRARG 186 Query 199 KRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARGGTG 245 + + ++ + + RA+E+ DA+ ARG G Sbjct 187 VDFG---EGNLFEQMKVVVPIFIPLFVSSFNRAEELADAMEARGYQG 230 >gi|16804672|ref|NP_466157.1| hypothetical protein lmo2634 [Listeria monocytogenes EGD-e] gi|224499307|ref|ZP_03667656.1| hypothetical protein LmonF1_06282 [Listeria monocytogenes Finland 1988] gi|224503571|ref|ZP_03671878.1| hypothetical protein LmonFR_13888 [Listeria monocytogenes FSL R2-561] gi|255017010|ref|ZP_05289136.1| hypothetical protein LmonF_02863 [Listeria monocytogenes FSL F2-515] gi|16412122|emb|CAD00712.1| lmo2634 [Listeria monocytogenes EGD-e] Length=266 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/227 (28%), Positives = 106/227 (47%), Gaps = 13/227 (5%) Query 25 VPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAARIAHIP-RGALPSV 83 VPG S+IH L A TKLL F +L W T +M L ++ I + + V Sbjct 11 VPGESLIHGLDARTKLLAGFYYIGILFLANNWWTYALMVLFTLMVVQMTGIKLKVFIKGV 70 Query 84 PRWLWIVLAIGFLTAALA-GGTPVVAVGGVQLG----LGGALHFLRITALSVVLLALGAM 138 +W++L + A GGT G + L G FLR V+++ + + Sbjct 71 KPLIWLILFTVVMQILFASGGTIYFDWGPFTISSFGLLNGVFVFLRF----VLIIIMSTV 126 Query 139 VSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLYAARRLRP 198 ++ TT ++ A+A + RPF VL++PV++ A+ +++ALR P L+ E + A+R R Sbjct 127 ITLTTTPMNLTDAIAYILRPFAVLKVPVNDIALMISVALRFIPTLMGETDKIMKAQRARG 186 Query 199 KRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARGGTG 245 + + ++ + + RA+E+ DA+ ARG G Sbjct 187 VDFG---EGNLFEQMKVVVPIFIPLFVSSFNRAEELADAMEARGYQG 230 >gi|47097671|ref|ZP_00235186.1| cobalt transport protein [Listeria monocytogenes str. 1/2a F6854] gi|254899915|ref|ZP_05259839.1| hypothetical protein LmonJ_08876 [Listeria monocytogenes J0161] gi|254912879|ref|ZP_05262891.1| cobalt transport protein [Listeria monocytogenes J2818] gi|254937260|ref|ZP_05268957.1| cobalt transporter [Listeria monocytogenes F6900] gi|47013952|gb|EAL04970.1| cobalt transport protein [Listeria monocytogenes str. 1/2a F6854] gi|258609866|gb|EEW22474.1| cobalt transporter [Listeria monocytogenes F6900] gi|293590879|gb|EFF99213.1| cobalt transport protein [Listeria monocytogenes J2818] Length=266 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/227 (28%), Positives = 106/227 (47%), Gaps = 13/227 (5%) Query 25 VPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAARIAHIP-RGALPSV 83 VPG S+IH L A TKLL F +L W T +M L ++ I + + V Sbjct 11 VPGESLIHGLDARTKLLAGFYYIGILFLANNWWTYALMVLFTLMVVQMTGIKLKVFIKGV 70 Query 84 PRWLWIVLAIGFLTAALA-GGTPVVAVGGVQLG----LGGALHFLRITALSVVLLALGAM 138 +W++L + A GGT G + L G FLR V+++ + + Sbjct 71 KPLIWLILFTVVMQILFASGGTIYFDWGPFTISSFGLLNGVFVFLRF----VLIIIMSTV 126 Query 139 VSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLYAARRLRP 198 ++ TT ++ A+A + RPF VL++PV++ A+ +++ALR P L+ E + A+R R Sbjct 127 ITLTTTPMNLTDAIAYILRPFAVLKVPVNDIALMISVALRFIPTLMGETDKIMKAQRARG 186 Query 199 KRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARGGTG 245 + + ++ + + RA+E+ DA+ ARG G Sbjct 187 VDFG---EGNLFEQMKVVVPIFIPLFVSSFNRAEELADAMEARGYQG 230 >gi|217966167|ref|YP_002351845.1| cobalt transport protein [Listeria monocytogenes HCC23] gi|290891819|ref|ZP_06554816.1| cobalt transporter [Listeria monocytogenes FSL J2-071] gi|217335437|gb|ACK41231.1| cobalt transport protein [Listeria monocytogenes HCC23] gi|290558413|gb|EFD91930.1| cobalt transporter [Listeria monocytogenes FSL J2-071] gi|307572223|emb|CAR85402.1| cobalt transport protein, permease component [Listeria monocytogenes L99] gi|336024614|gb|AEH93751.1| putative cobalt/nickel uptake ABC transporter, permease [Listeria monocytogenes M7] Length=266 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/227 (28%), Positives = 106/227 (47%), Gaps = 13/227 (5%) Query 25 VPGSSVIHDLWAGTKLLVVFGISVLLTFYPGWVTIGMMAALVLAAARIAHIP-RGALPSV 83 VPG S+IH L A TKLL F +L W T +M L ++ I + + V Sbjct 11 VPGESLIHGLDARTKLLAGFYYIGILFLANNWWTYALMVLFTLMVIQMTGIKLKVFIKGV 70 Query 84 PRWLWIVLAIGFLTAALA-GGTPVVAVGGVQLG----LGGALHFLRITALSVVLLALGAM 138 +W++L + A GGT G + L G FLR V+++ + + Sbjct 71 KPLIWLILFTVVMQILFASGGTIYFDWGPFTISSFGLLNGVFVFLRF----VLIIMMSTV 126 Query 139 VSWTTNVAEISPAVATLGRPFRVLRIPVDEWAVALALALRAFPMLIDEFQVLYAARRLRP 198 ++ TT ++ A+A + RPF VL++PV++ A+ +++ALR P L+ E + A+R R Sbjct 127 ITLTTTPMNLTDAIAYILRPFAVLKVPVNDIALMISVALRFIPTLMGETDKIMKAQRARG 186 Query 199 KRMPPSRKARRQRHARELIDLLAAAITVTLRRADEMGDAITARGGTG 245 + + ++ + + RA+E+ DA+ ARG G Sbjct 187 VDFG---EGNLFEQMKVVVPIFIPLFVSSFNRAEELADAMEARGYQG 230 Lambda K H 0.326 0.138 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 449018424576 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40