BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2327
Length=163
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609464|ref|NP_216843.1| hypothetical protein Rv2327 [Mycoba... 307 3e-82
gi|307084995|ref|ZP_07494108.1| hypothetical protein TMLG_03291 ... 299 1e-79
gi|289443843|ref|ZP_06433587.1| LOW QUALITY PROTEIN: conserved h... 271 2e-71
gi|308232102|ref|ZP_07414921.2| hypothetical protein TMAG_00516 ... 268 2e-70
gi|183983606|ref|YP_001851897.1| hypothetical protein MMAR_3627 ... 251 2e-65
gi|118616947|ref|YP_905279.1| hypothetical protein MUL_1238 [Myc... 248 2e-64
gi|289570458|ref|ZP_06450685.1| LOW QUALITY PROTEIN: conserved h... 243 9e-63
gi|296166340|ref|ZP_06848776.1| MarR-family transcriptional regu... 234 3e-60
gi|254774800|ref|ZP_05216316.1| transcriptional regulator, MarR ... 227 5e-58
gi|118462997|ref|YP_881296.1| MarR family transcriptional regula... 226 1e-57
gi|41408197|ref|NP_961033.1| hypothetical protein MAP2099 [Mycob... 225 2e-57
gi|254820671|ref|ZP_05225672.1| transcriptional regulator, MarR ... 224 3e-57
gi|342857447|ref|ZP_08714103.1| MarR family transcriptional regu... 223 8e-57
gi|240170971|ref|ZP_04749630.1| hypothetical protein MkanA1_1679... 223 9e-57
gi|120404765|ref|YP_954594.1| MarR family transcriptional regula... 186 1e-45
gi|145223316|ref|YP_001133994.1| MarR family transcriptional reg... 181 5e-44
gi|108800398|ref|YP_640595.1| MarR family transcriptional regula... 180 6e-44
gi|333990225|ref|YP_004522839.1| hypothetical protein JDM601_158... 179 9e-44
gi|126436021|ref|YP_001071712.1| MarR family transcriptional reg... 177 3e-43
gi|118470155|ref|YP_888744.1| MarR family transcriptional regula... 177 6e-43
gi|296270694|ref|YP_003653326.1| MarR family transcriptional reg... 174 4e-42
gi|169627262|ref|YP_001700911.1| putative transcriptional regula... 132 2e-29
gi|309810551|ref|ZP_07704369.1| transcriptional regulator, MarR ... 106 1e-21
gi|84497020|ref|ZP_00995842.1| hypothetical protein JNB_12538 [J... 97.1 7e-19
gi|336120351|ref|YP_004575134.1| putative MarR family transcript... 90.1 1e-16
gi|226365003|ref|YP_002782786.1| MarR family transcriptional reg... 83.2 1e-14
gi|111022486|ref|YP_705458.1| MarR family transcriptional regula... 82.0 2e-14
gi|226304886|ref|YP_002764844.1| MarR family transcriptional reg... 81.6 4e-14
gi|229493005|ref|ZP_04386800.1| MarR-family transcriptional regu... 81.3 5e-14
gi|269796321|ref|YP_003315776.1| transcriptional regulator [Sang... 79.7 1e-13
gi|325673855|ref|ZP_08153545.1| MarR family transcriptional regu... 75.1 3e-12
gi|312141308|ref|YP_004008644.1| marr family transcriptional reg... 74.7 4e-12
gi|257067359|ref|YP_003153614.1| transcriptional regulator [Brac... 70.9 5e-11
gi|342860234|ref|ZP_08716886.1| MarR family transcriptional regu... 70.5 8e-11
gi|257068527|ref|YP_003154782.1| transcriptional regulator [Brac... 69.7 1e-10
gi|111223002|ref|YP_713796.1| MarR family transcriptional regula... 69.3 2e-10
gi|15828456|ref|NP_302719.1| MarR family transcriptional regulat... 69.3 2e-10
gi|240168769|ref|ZP_04747428.1| transcriptional regulatory prote... 68.6 3e-10
gi|284028467|ref|YP_003378398.1| MarR family transcriptional reg... 68.6 3e-10
gi|256374642|ref|YP_003098302.1| MarR family transcriptional reg... 68.2 4e-10
gi|118615972|ref|YP_904304.1| transcriptional regulatory protein... 68.2 4e-10
gi|183980094|ref|YP_001848385.1| transcriptional regulatory prot... 68.2 4e-10
gi|337769493|emb|CCB78206.1| Transcriptional regulator (modular ... 67.8 5e-10
gi|302531283|ref|ZP_07283625.1| predicted protein [Streptomyces ... 67.4 6e-10
gi|289425318|ref|ZP_06427095.1| transcriptional regulator, MarR ... 67.4 7e-10
gi|117929267|ref|YP_873818.1| MarR family transcriptional regula... 67.4 7e-10
gi|323359633|ref|YP_004226029.1| transcriptional regulator [Micr... 67.0 9e-10
gi|296167084|ref|ZP_06849495.1| MarR family transcriptional regu... 66.6 1e-09
gi|331696980|ref|YP_004333219.1| regulatory protein MarR [Pseudo... 66.6 1e-09
gi|311893744|dbj|BAJ26152.1| putative MarR family transcriptiona... 66.6 1e-09
>gi|15609464|ref|NP_216843.1| hypothetical protein Rv2327 [Mycobacterium tuberculosis H37Rv]
gi|15841830|ref|NP_336867.1| MarR family transcriptional regulator [Mycobacterium tuberculosis
CDC1551]
gi|31793510|ref|NP_856003.1| hypothetical protein Mb2354 [Mycobacterium bovis AF2122/97]
62 more sequence titles
Length=163
Score = 307 bits (786), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 163/163 (100%), Positives = 163/163 (100%), Gaps = 0/163 (0%)
Query 1 MSPSPAAANRSEVGGPLPGLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEA 60
MSPSPAAANRSEVGGPLPGLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEA
Sbjct 1 MSPSPAAANRSEVGGPLPGLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEA 60
Query 61 RIGDLAAVDHCSQPTMTTQVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADR 120
RIGDLAAVDHCSQPTMTTQVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADR
Sbjct 61 RIGDLAAVDHCSQPTMTTQVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADR 120
Query 121 AAAIEPQLALLPPADRRVLADAVDVLRRLLDHAATTPGRATRQ 163
AAAIEPQLALLPPADRRVLADAVDVLRRLLDHAATTPGRATRQ
Sbjct 121 AAAIEPQLALLPPADRRVLADAVDVLRRLLDHAATTPGRATRQ 163
>gi|307084995|ref|ZP_07494108.1| hypothetical protein TMLG_03291 [Mycobacterium tuberculosis SUMu012]
gi|308365447|gb|EFP54298.1| hypothetical protein TMLG_03291 [Mycobacterium tuberculosis SUMu012]
Length=168
Score = 299 bits (765), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 159/159 (100%), Positives = 159/159 (100%), Gaps = 0/159 (0%)
Query 5 PAAANRSEVGGPLPGLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGD 64
PAAANRSEVGGPLPGLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGD
Sbjct 10 PAAANRSEVGGPLPGLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGD 69
Query 65 LAAVDHCSQPTMTTQVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAI 124
LAAVDHCSQPTMTTQVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAI
Sbjct 70 LAAVDHCSQPTMTTQVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAI 129
Query 125 EPQLALLPPADRRVLADAVDVLRRLLDHAATTPGRATRQ 163
EPQLALLPPADRRVLADAVDVLRRLLDHAATTPGRATRQ
Sbjct 130 EPQLALLPPADRRVLADAVDVLRRLLDHAATTPGRATRQ 168
>gi|289443843|ref|ZP_06433587.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis T46]
gi|289416762|gb|EFD14002.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis T46]
Length=163
Score = 271 bits (694), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 145/145 (100%), Positives = 145/145 (100%), Gaps = 0/145 (0%)
Query 19 GLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTT 78
GLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTT
Sbjct 19 GLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTT 78
Query 79 QVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRV 138
QVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRV
Sbjct 79 QVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRV 138
Query 139 LADAVDVLRRLLDHAATTPGRATRQ 163
LADAVDVLRRLLDHAATTPGRATRQ
Sbjct 139 LADAVDVLRRLLDHAATTPGRATRQ 163
>gi|308232102|ref|ZP_07414921.2| hypothetical protein TMAG_00516 [Mycobacterium tuberculosis SUMu001]
gi|308373382|ref|ZP_07432099.2| hypothetical protein TMEG_02693 [Mycobacterium tuberculosis SUMu005]
gi|308375849|ref|ZP_07445310.2| hypothetical protein TMGG_00885 [Mycobacterium tuberculosis SUMu007]
9 more sequence titles
Length=144
Score = 268 bits (685), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/144 (99%), Positives = 144/144 (100%), Gaps = 0/144 (0%)
Query 20 LGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTTQ 79
+GADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTTQ
Sbjct 1 MGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTTQ 60
Query 80 VRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRVL 139
VRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRVL
Sbjct 61 VRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRVL 120
Query 140 ADAVDVLRRLLDHAATTPGRATRQ 163
ADAVDVLRRLLDHAATTPGRATRQ
Sbjct 121 ADAVDVLRRLLDHAATTPGRATRQ 144
>gi|183983606|ref|YP_001851897.1| hypothetical protein MMAR_3627 [Mycobacterium marinum M]
gi|183176932|gb|ACC42042.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=158
Score = 251 bits (641), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/158 (85%), Positives = 145/158 (92%), Gaps = 3/158 (1%)
Query 4 SPAAANRSEVGGPLPGLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIG 63
S A AN+++V GLGADLLAVVARLNRLATQRIQMPLP+AQARLLATIEAQGEARIG
Sbjct 3 SSATANQAQVAH---GLGADLLAVVARLNRLATQRIQMPLPSAQARLLATIEAQGEARIG 59
Query 64 DLAAVDHCSQPTMTTQVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAA 123
DLAAVDHCSQPTMTTQVRRLEDAG+VTRT DPGDARAVRIRITPEG+RTL+AVR DRAAA
Sbjct 60 DLAAVDHCSQPTMTTQVRRLEDAGMVTRTVDPGDARAVRIRITPEGMRTLSAVRTDRAAA 119
Query 124 IEPQLALLPPADRRVLADAVDVLRRLLDHAATTPGRAT 161
IEPQLA L P+DR+VLADAV+VLRRLLD+AA TPGR T
Sbjct 120 IEPQLARLEPSDRQVLADAVEVLRRLLDNAAATPGRNT 157
>gi|118616947|ref|YP_905279.1| hypothetical protein MUL_1238 [Mycobacterium ulcerans Agy99]
gi|118569057|gb|ABL03808.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=158
Score = 248 bits (633), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/158 (85%), Positives = 144/158 (92%), Gaps = 3/158 (1%)
Query 4 SPAAANRSEVGGPLPGLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIG 63
S A AN+++V GLGADLLAVVARLNRLATQRIQMPLP+AQARLLATIEAQGEARIG
Sbjct 3 SSATANQAQVAH---GLGADLLAVVARLNRLATQRIQMPLPSAQARLLATIEAQGEARIG 59
Query 64 DLAAVDHCSQPTMTTQVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAA 123
DLAAVDHCSQPTMTTQVRRLEDAG+VTRT DPGDARAVRIRITPEG+RTL+AVR DRAAA
Sbjct 60 DLAAVDHCSQPTMTTQVRRLEDAGMVTRTVDPGDARAVRIRITPEGMRTLSAVRTDRAAA 119
Query 124 IEPQLALLPPADRRVLADAVDVLRRLLDHAATTPGRAT 161
IEPQLA L P+DR+VLA AV+VLRRLLD+AA TPGR T
Sbjct 120 IEPQLARLEPSDRQVLAGAVEVLRRLLDNAAATPGRNT 157
>gi|289570458|ref|ZP_06450685.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis T17]
gi|289544212|gb|EFD47860.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis T17]
Length=127
Score = 243 bits (619), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 127/127 (100%), Positives = 127/127 (100%), Gaps = 0/127 (0%)
Query 1 MSPSPAAANRSEVGGPLPGLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEA 60
MSPSPAAANRSEVGGPLPGLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEA
Sbjct 1 MSPSPAAANRSEVGGPLPGLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEA 60
Query 61 RIGDLAAVDHCSQPTMTTQVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADR 120
RIGDLAAVDHCSQPTMTTQVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADR
Sbjct 61 RIGDLAAVDHCSQPTMTTQVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADR 120
Query 121 AAAIEPQ 127
AAAIEPQ
Sbjct 121 AAAIEPQ 127
>gi|296166340|ref|ZP_06848776.1| MarR-family transcriptional regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898303|gb|EFG77873.1| MarR-family transcriptional regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=157
Score = 234 bits (597), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 125/142 (89%), Positives = 131/142 (93%), Gaps = 0/142 (0%)
Query 20 LGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTTQ 79
LGADLLAVVARLNRLATQRIQMPLPAAQARLLA+IEA GEARIGDLAAVDHCSQPTMTTQ
Sbjct 15 LGADLLAVVARLNRLATQRIQMPLPAAQARLLASIEAHGEARIGDLAAVDHCSQPTMTTQ 74
Query 80 VRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRVL 139
VRRLEDAGLVTRT DPGDARAVRIRITP+G RTL AVRADRAAAIEPQLALL P DR+VL
Sbjct 75 VRRLEDAGLVTRTVDPGDARAVRIRITPQGKRTLNAVRADRAAAIEPQLALLEPRDRQVL 134
Query 140 ADAVDVLRRLLDHAATTPGRAT 161
DAV+VLRRLLD+A+T R T
Sbjct 135 TDAVEVLRRLLDNASTAGRRNT 156
>gi|254774800|ref|ZP_05216316.1| transcriptional regulator, MarR family protein [Mycobacterium
avium subsp. avium ATCC 25291]
gi|336461714|gb|EGO40576.1| transcriptional regulator [Mycobacterium avium subsp. paratuberculosis
S397]
Length=162
Score = 227 bits (578), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 123/145 (85%), Positives = 129/145 (89%), Gaps = 0/145 (0%)
Query 19 GLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTT 78
GLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEA GEARIGDLAAVDHCSQPTMTT
Sbjct 15 GLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAHGEARIGDLAAVDHCSQPTMTT 74
Query 79 QVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRV 138
QVRRLE+AGLVTRT DPGDARAVRIRIT EG RTL AVRADRAAAI+PQLALL DR+V
Sbjct 75 QVRRLEEAGLVTRTVDPGDARAVRIRITAEGRRTLNAVRADRAAAIQPQLALLDAEDRQV 134
Query 139 LADAVDVLRRLLDHAATTPGRATRQ 163
L AVDVLRRLLD+A+ A R+
Sbjct 135 LRQAVDVLRRLLDNASLASSLAGRR 159
>gi|118462997|ref|YP_881296.1| MarR family transcriptional regulator [Mycobacterium avium 104]
gi|118164284|gb|ABK65181.1| transcriptional regulator, MarR family protein [Mycobacterium
avium 104]
Length=175
Score = 226 bits (576), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/145 (85%), Positives = 129/145 (89%), Gaps = 0/145 (0%)
Query 19 GLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTT 78
GLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEA GEARIGDLAAVDHCSQPTMTT
Sbjct 15 GLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAHGEARIGDLAAVDHCSQPTMTT 74
Query 79 QVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRV 138
QVRRLE+AGLVTRT DPGDARAVRIRIT EG RTL AVRADRAAAI+PQLALL DR+V
Sbjct 75 QVRRLEEAGLVTRTVDPGDARAVRIRITAEGRRTLNAVRADRAAAIQPQLALLDAEDRQV 134
Query 139 LADAVDVLRRLLDHAATTPGRATRQ 163
L AVDVLRRLLD+A+ A R+
Sbjct 135 LRQAVDVLRRLLDNASLASSLAGRR 159
>gi|41408197|ref|NP_961033.1| hypothetical protein MAP2099 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396552|gb|AAS04416.1| hypothetical protein MAP_2099 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=162
Score = 225 bits (573), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 122/145 (85%), Positives = 129/145 (89%), Gaps = 0/145 (0%)
Query 19 GLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTT 78
GLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEA GEARIGDLAAVDHCSQPTMTT
Sbjct 15 GLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAHGEARIGDLAAVDHCSQPTMTT 74
Query 79 QVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRV 138
QVRRLE+AGLVTRT DPGDARAVRIRIT +G RTL AVRADRAAAI+PQLALL DR+V
Sbjct 75 QVRRLEEAGLVTRTVDPGDARAVRIRITADGRRTLNAVRADRAAAIQPQLALLDAEDRQV 134
Query 139 LADAVDVLRRLLDHAATTPGRATRQ 163
L AVDVLRRLLD+A+ A R+
Sbjct 135 LRQAVDVLRRLLDNASLASSLAGRR 159
>gi|254820671|ref|ZP_05225672.1| transcriptional regulator, MarR family protein [Mycobacterium
intracellulare ATCC 13950]
Length=162
Score = 224 bits (571), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/145 (85%), Positives = 126/145 (87%), Gaps = 0/145 (0%)
Query 19 GLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTT 78
GLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIE GEARIGDLAAVDHCSQPTMTT
Sbjct 15 GLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEVHGEARIGDLAAVDHCSQPTMTT 74
Query 79 QVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRV 138
QVRRLE+AGLVTR DPGDARAVRIRIT EG RTL AVRADRAAAIEPQLALL DR+V
Sbjct 75 QVRRLEEAGLVTRMVDPGDARAVRIRITAEGRRTLNAVRADRAAAIEPQLALLDAGDRQV 134
Query 139 LADAVDVLRRLLDHAATTPGRATRQ 163
L AVDVLRRLLD A+ A R+
Sbjct 135 LMQAVDVLRRLLDDASLATSLAGRR 159
>gi|342857447|ref|ZP_08714103.1| MarR family transcriptional regulator [Mycobacterium colombiense
CECT 3035]
gi|342134780|gb|EGT87946.1| MarR family transcriptional regulator [Mycobacterium colombiense
CECT 3035]
Length=162
Score = 223 bits (568), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 120/136 (89%), Positives = 125/136 (92%), Gaps = 0/136 (0%)
Query 19 GLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTT 78
GLGADLLAVVARLNR+ATQRIQMPLPAAQARLLATIEA GEARIGDLAAVDHCSQPTMTT
Sbjct 15 GLGADLLAVVARLNRMATQRIQMPLPAAQARLLATIEAHGEARIGDLAAVDHCSQPTMTT 74
Query 79 QVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRV 138
QVRRLE+AGLVTR DPGDARAVRIRIT EG RTL AVRADRAAAIEPQLALL ADR+V
Sbjct 75 QVRRLEEAGLVTRMVDPGDARAVRIRITAEGRRTLNAVRADRAAAIEPQLALLDDADRQV 134
Query 139 LADAVDVLRRLLDHAA 154
L AVDVLR LLD+A+
Sbjct 135 LRQAVDVLRGLLDNAS 150
>gi|240170971|ref|ZP_04749630.1| hypothetical protein MkanA1_16793 [Mycobacterium kansasii ATCC
12478]
Length=161
Score = 223 bits (567), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 130/158 (83%), Positives = 142/158 (90%), Gaps = 0/158 (0%)
Query 4 SPAAANRSEVGGPLPGLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIG 63
S AA +++ P GLGADLL VVARLNRLATQRIQMPLP+AQARLLATIEA+GEARIG
Sbjct 3 SSAATDQAGAVVPHQGLGADLLGVVARLNRLATQRIQMPLPSAQARLLATIEAKGEARIG 62
Query 64 DLAAVDHCSQPTMTTQVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAA 123
DLAAVDHCSQPTMTTQVRRLE+AGLVTRT DPGDARAVRIRITP+G RTL AVRADRAAA
Sbjct 63 DLAAVDHCSQPTMTTQVRRLEEAGLVTRTVDPGDARAVRIRITPDGQRTLAAVRADRAAA 122
Query 124 IEPQLALLPPADRRVLADAVDVLRRLLDHAATTPGRAT 161
IEPQLA L PADR+VLA+AV+VLR+LLD+AA TPGR T
Sbjct 123 IEPQLARLGPADRQVLAEAVEVLRQLLDNAAATPGRNT 160
>gi|120404765|ref|YP_954594.1| MarR family transcriptional regulator [Mycobacterium vanbaalenii
PYR-1]
gi|119957583|gb|ABM14588.1| transcriptional regulator, MarR family [Mycobacterium vanbaalenii
PYR-1]
Length=143
Score = 186 bits (472), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/139 (72%), Positives = 114/139 (83%), Gaps = 1/139 (0%)
Query 20 LGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTTQ 79
LG+DLLAVVAR+NRLA QR++MP+P AQARLL+TIE +GEARI DLAA+DHCSQPTMTTQ
Sbjct 5 LGSDLLAVVARINRLANQRVRMPVPFAQARLLSTIEDKGEARISDLAALDHCSQPTMTTQ 64
Query 80 VRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRVL 139
VRRLEDAG+VTRT DP DARAV IRITP+G+ L RADR AAI+P L L ADR L
Sbjct 65 VRRLEDAGMVTRTTDPKDARAVLIRITPDGVAALRQARADRGAAIDPHLERLSDADRACL 124
Query 140 ADAVDVLRRLLDHAATTPG 158
A AV V+RRL++ ATTP
Sbjct 125 AQAVGVMRRLIE-GATTPS 142
>gi|145223316|ref|YP_001133994.1| MarR family transcriptional regulator [Mycobacterium gilvum PYR-GCK]
gi|315443776|ref|YP_004076655.1| MarR family transcriptional regulator [Mycobacterium sp. Spyr1]
gi|145215802|gb|ABP45206.1| transcriptional regulator, MarR family [Mycobacterium gilvum
PYR-GCK]
gi|315262079|gb|ADT98820.1| transcriptional regulator, MarR family [Mycobacterium sp. Spyr1]
Length=146
Score = 181 bits (458), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 95/139 (69%), Positives = 112/139 (81%), Gaps = 1/139 (0%)
Query 20 LGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTTQ 79
LG+DLL+VVAR+NRLA QR++MP+P AQARLL+TIE +GEARI DLAA+DHCSQPTMTTQ
Sbjct 5 LGSDLLSVVARINRLANQRVRMPVPFAQARLLSTIEDRGEARISDLAALDHCSQPTMTTQ 64
Query 80 VRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRVL 139
VRRLEDAGLV RTADP DARAV IRITP G+ L RADR AA++P L L DR L
Sbjct 65 VRRLEDAGLVARTADPNDARAVLIRITPAGVSALRQARADRGAAVDPYLERLDDTDRATL 124
Query 140 ADAVDVLRRLLDHAATTPG 158
AVD++RRL++ AT+P
Sbjct 125 TQAVDIMRRLVED-ATSPS 142
>gi|108800398|ref|YP_640595.1| MarR family transcriptional regulator [Mycobacterium sp. MCS]
gi|119869527|ref|YP_939479.1| MarR family transcriptional regulator [Mycobacterium sp. KMS]
gi|108770817|gb|ABG09539.1| transcriptional regulator, MarR family [Mycobacterium sp. MCS]
gi|119695616|gb|ABL92689.1| transcriptional regulator, MarR family [Mycobacterium sp. KMS]
Length=155
Score = 180 bits (456), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 101/147 (69%), Positives = 114/147 (78%), Gaps = 2/147 (1%)
Query 4 SPAAANRSEVGGPLPGLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIG 63
+PA + GG LG DLLAVVARLNRLATQR ++PLP AQARLL+TIE QGEARI
Sbjct 6 TPATEDSPGAGGE--HLGGDLLAVVARLNRLATQRTRLPLPWAQARLLSTIEDQGEARIS 63
Query 64 DLAAVDHCSQPTMTTQVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAA 123
DLA +D CSQPTMTTQVRRLEDAGLV+RT DP DARAV IRIT +G LT R DRAA
Sbjct 64 DLATLDRCSQPTMTTQVRRLEDAGLVSRTTDPLDARAVLIRITDKGRTVLTQARIDRAAV 123
Query 124 IEPQLALLPPADRRVLADAVDVLRRLL 150
I+P+LA L P DR+ LADAV+V+ RLL
Sbjct 124 IDPRLAQLSPEDRQTLADAVEVIERLL 150
>gi|333990225|ref|YP_004522839.1| hypothetical protein JDM601_1585 [Mycobacterium sp. JDM601]
gi|333486193|gb|AEF35585.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=149
Score = 179 bits (455), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 99/142 (70%), Positives = 115/142 (81%), Gaps = 1/142 (0%)
Query 19 GLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTT 78
LGADLL+VVARLNR+ATQR+ +P+P AQARLL+TIE EARI +LAAVDHCSQPTMTT
Sbjct 8 SLGADLLSVVARLNRVATQRVALPIPGAQARLLSTIEDLDEARISELAAVDHCSQPTMTT 67
Query 79 QVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRV 138
QVRRLEDAGL TRT DP DARAV I IT +G++TL VR DRAAAI+P+L L DRR
Sbjct 68 QVRRLEDAGLTTRTPDPQDARAVLIGITEKGVQTLDQVRRDRAAAIDPELDRLSAEDRRT 127
Query 139 LADAVDVLRRLL-DHAATTPGR 159
LA+AV+VLRR L + A + PGR
Sbjct 128 LAEAVEVLRRFLAETAPSRPGR 149
>gi|126436021|ref|YP_001071712.1| MarR family transcriptional regulator [Mycobacterium sp. JLS]
gi|126235821|gb|ABN99221.1| transcriptional regulator, MarR family [Mycobacterium sp. JLS]
Length=155
Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/147 (69%), Positives = 113/147 (77%), Gaps = 2/147 (1%)
Query 4 SPAAANRSEVGGPLPGLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIG 63
+PA + GG LG DLLAVVARLNRLATQR ++PLP AQARLL+TIE QGEARI
Sbjct 6 TPATEDSPGAGGE--HLGGDLLAVVARLNRLATQRTRLPLPWAQARLLSTIEDQGEARIS 63
Query 64 DLAAVDHCSQPTMTTQVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAA 123
DLA +D CSQPTMTTQVRRLEDAGLV+RT DP DARAV IRIT +G L R DRAA
Sbjct 64 DLATLDRCSQPTMTTQVRRLEDAGLVSRTTDPLDARAVLIRITDKGRTVLAQARIDRAAV 123
Query 124 IEPQLALLPPADRRVLADAVDVLRRLL 150
I+P+LA L P DR+ LADAV+V+ RLL
Sbjct 124 IDPRLAQLSPEDRQTLADAVEVIERLL 150
>gi|118470155|ref|YP_888744.1| MarR family transcriptional regulator [Mycobacterium smegmatis
str. MC2 155]
gi|118171442|gb|ABK72338.1| MarR-family protein transcriptional regulator [Mycobacterium
smegmatis str. MC2 155]
Length=149
Score = 177 bits (448), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 102/138 (74%), Positives = 114/138 (83%), Gaps = 0/138 (0%)
Query 20 LGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTTQ 79
LGADLLAVVARLNRLATQR ++PLP AQARLL+TIE QGEARI DLA +DHCSQPTMTTQ
Sbjct 7 LGADLLAVVARLNRLATQRTRLPLPYAQARLLSTIEDQGEARISDLALLDHCSQPTMTTQ 66
Query 80 VRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRVL 139
VRRLE+AGLV+RTADPGDARAV IRIT EG +TL RADRAAAI P+L L DR+ L
Sbjct 67 VRRLEEAGLVSRTADPGDARAVLIRITEEGRKTLAQARADRAAAINPRLERLSAEDRQTL 126
Query 140 ADAVDVLRRLLDHAATTP 157
DAV+V+R+LL A P
Sbjct 127 VDAVEVIRKLLADVAEHP 144
>gi|296270694|ref|YP_003653326.1| MarR family transcriptional regulator [Thermobispora bispora
DSM 43833]
gi|296093481|gb|ADG89433.1| transcriptional regulator, MarR family [Thermobispora bispora
DSM 43833]
Length=147
Score = 174 bits (441), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/136 (69%), Positives = 104/136 (77%), Gaps = 0/136 (0%)
Query 19 GLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTT 78
LGADLLAVVARLNRLATQR ++PLP AQARLL+TIE QGEARI DLAA+DHCSQPTMT
Sbjct 6 SLGADLLAVVARLNRLATQRARLPLPYAQARLLSTIEDQGEARISDLAALDHCSQPTMTN 65
Query 79 QVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRV 138
QVRRLE+AGLV+R DP D RAV IRITP+G TL R R A I+P L L P +R
Sbjct 66 QVRRLEEAGLVSRAVDPSDGRAVLIRITPKGAETLRQARVQRGAVIDPYLERLDPEERAT 125
Query 139 LADAVDVLRRLLDHAA 154
L AV +LRRLLD +
Sbjct 126 LRAAVGILRRLLDEVS 141
>gi|169627262|ref|YP_001700911.1| putative transcriptional regulator MarR [Mycobacterium abscessus
ATCC 19977]
gi|169239229|emb|CAM60257.1| Hypothetical transcriptional regulator, MarR [Mycobacterium abscessus]
Length=145
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/140 (49%), Positives = 89/140 (64%), Gaps = 0/140 (0%)
Query 19 GLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTT 78
GL AD+L V+ARLNR + +P+P QARLLA + +ARI DLA DHCSQPTMT
Sbjct 6 GLTADVLTVIARLNRWVSSYADLPVPTGQARLLALVGEMEDARISDLAQADHCSQPTMTV 65
Query 79 QVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRV 138
Q++RL+D G V R DP D RA RI++T +G L A+RA R ++P L+ LP ++R
Sbjct 66 QLKRLQDVGYVERRVDPADKRAQRIKLTSKGREALVAMRAQRQGVLDPWLSTLPAEEQRT 125
Query 139 LADAVDVLRRLLDHAATTPG 158
LA+A +L RL A G
Sbjct 126 LAEAAAILERLTRRMAAQSG 145
>gi|309810551|ref|ZP_07704369.1| transcriptional regulator, MarR family [Dermacoccus sp. Ellin185]
gi|308435548|gb|EFP59362.1| transcriptional regulator, MarR family [Dermacoccus sp. Ellin185]
Length=161
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/126 (50%), Positives = 79/126 (63%), Gaps = 0/126 (0%)
Query 21 GADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTTQV 80
G LL VVARLNR A++ Q+P PAAQ RLL+ I G +RIGDLA D+ SQPTMTTQV
Sbjct 23 GDRLLLVVARLNRWASRHAQLPAPAAQLRLLSLINDLGPSRIGDLATADNSSQPTMTTQV 82
Query 81 RRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRVLA 140
+RLE GLV R+ D D RA + +TP G TLT R RA + P L + + L
Sbjct 83 KRLEGLGLVNRSQDARDGRATLVTMTPAGRETLTKAREARAEVVVPLLDGMSEDELATLD 142
Query 141 DAVDVL 146
A+++L
Sbjct 143 AALEIL 148
>gi|84497020|ref|ZP_00995842.1| hypothetical protein JNB_12538 [Janibacter sp. HTCC2649]
gi|84381908|gb|EAP97790.1| hypothetical protein JNB_12538 [Janibacter sp. HTCC2649]
Length=140
Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/130 (49%), Positives = 79/130 (61%), Gaps = 0/130 (0%)
Query 21 GADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTTQV 80
G LL VARL+R AT+ + +P AQ RLLA + G ARIGDLA DHCSQPTMT+Q+
Sbjct 10 GDQLLRTVARLHRWATRNAHLEVPPAQMRLLALVGDIGPARIGDLAEADHCSQPTMTSQI 69
Query 81 RRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRVLA 140
+R E G +TRT DP DARA I ++ +G L RA R AAI P L L D L
Sbjct 70 QRAEQHGWLTRTPDPDDARASLIALSAKGESELATARASRTAAITPLLEGLSQRDAATLT 129
Query 141 DAVDVLRRLL 150
A+ ++ L+
Sbjct 130 RAIGIVDSLI 139
>gi|336120351|ref|YP_004575134.1| putative MarR family transcriptional regulator [Microlunatus
phosphovorus NM-1]
gi|334688146|dbj|BAK37731.1| putative MarR family transcriptional regulator [Microlunatus
phosphovorus NM-1]
Length=140
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/110 (47%), Positives = 68/110 (62%), Gaps = 0/110 (0%)
Query 41 MPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTTQVRRLEDAGLVTRTADPGDARA 100
M L A AR+LA I+ G RI DLA + SQPT+T V+RLE AGLV R DP DARA
Sbjct 28 MELSLAAARVLARIKDNGPCRISDLAIQERSSQPTITNHVKRLEAAGLVERAMDPSDARA 87
Query 101 VRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRVLADAVDVLRRLL 150
I ++P G + LT +R +EP LA L +RR L + ++V++RL+
Sbjct 88 WLIELSPLGQQRLTELRRQMGTNVEPMLAKLNARERRALRNGLEVMQRLI 137
>gi|226365003|ref|YP_002782786.1| MarR family transcriptional regulator [Rhodococcus opacus B4]
gi|226243493|dbj|BAH53841.1| putative MarR family transcriptional regulator [Rhodococcus opacus
B4]
Length=149
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/144 (39%), Positives = 72/144 (50%), Gaps = 4/144 (2%)
Query 17 LPGLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTM 76
L L DL+ R RLA+ P R LA ++ GE RI + A +D CSQP+
Sbjct 10 LHSLLVDLVTNSHRFTRLASSFGSEDHPRPWTRALALLDDHGELRISEFARIDRCSQPSA 69
Query 77 TTQVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADR 136
T +++L D G V R DP DARAVR+ IT G LT R + A A+ P A L P
Sbjct 70 TALLQKLADRGYVARRPDPDDARAVRVSITDLGRDWLTVARNEIAGALAPHFADLEPGQL 129
Query 137 RVLADAVDVLRRLLDHAATTPGRA 160
L + LR ++ T+P RA
Sbjct 130 ERLTQGLSELRSIV----TSPARA 149
>gi|111022486|ref|YP_705458.1| MarR family transcriptional regulator [Rhodococcus jostii RHA1]
gi|110822016|gb|ABG97300.1| possible transcriptional regulator, MarR family protein [Rhodococcus
jostii RHA1]
Length=145
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/138 (39%), Positives = 69/138 (50%), Gaps = 0/138 (0%)
Query 17 LPGLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTM 76
L L DL+ R RLA+ P R LA ++ QGE RI + A +D CSQP+
Sbjct 6 LQSLLVDLVTNSHRFTRLASSFGSEAHPRPWTRALALLDDQGEIRISEFARIDRCSQPSA 65
Query 77 TTQVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADR 136
T +++L D G V R DP DARAVR+ IT G LT R + A A+ P A L P
Sbjct 66 TALLQKLADRGYVARRPDPEDARAVRVSITDLGREWLTVARNEIAGALAPHFADLEPEQL 125
Query 137 RVLADAVDVLRRLLDHAA 154
L LR ++ +A
Sbjct 126 ERLTQGQSELRSIVKSSA 143
>gi|226304886|ref|YP_002764844.1| MarR family transcriptional regulator [Rhodococcus erythropolis
PR4]
gi|226184001|dbj|BAH32105.1| putative MarR family transcriptional regulator [Rhodococcus erythropolis
PR4]
Length=147
Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/134 (39%), Positives = 71/134 (53%), Gaps = 0/134 (0%)
Query 17 LPGLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTM 76
L L DL++ R +LA P A R L+ +E GE RI D A +D SQP+
Sbjct 8 LHELLVDLVSNTHRFAKLAGSFASDQYPRAWLRALSLLEEYGEMRISDFARLDRSSQPSA 67
Query 77 TTQVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADR 136
T +R+L + G V R ADP DARAVR+ +T +G + L R + A A+ P L P
Sbjct 68 TALLRKLGENGYVERRADPEDARAVRVAMTEKGRKILNDGRNEIADALVPHFVELGPEQI 127
Query 137 RVLADAVDVLRRLL 150
+ LAD + LR ++
Sbjct 128 KKLADGLAELRSII 141
>gi|229493005|ref|ZP_04386800.1| MarR-family transcriptional regulator [Rhodococcus erythropolis
SK121]
gi|229320035|gb|EEN85861.1| MarR-family transcriptional regulator [Rhodococcus erythropolis
SK121]
Length=147
Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/134 (39%), Positives = 71/134 (53%), Gaps = 0/134 (0%)
Query 17 LPGLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTM 76
L L DL++ R +LA P A R L+ +E GE RI D A +D SQP+
Sbjct 8 LHELLVDLVSNTHRFAKLAGSFASDQYPRAWLRALSLLEEYGEMRISDFARLDRSSQPSA 67
Query 77 TTQVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADR 136
T +R+L + G V R ADP DARAVR+ +T +G + L R + A A+ P L P
Sbjct 68 TALLRKLGENGYVERRADPEDARAVRVAMTDKGRKILNDGRNEIADALVPHFVELGPEQI 127
Query 137 RVLADAVDVLRRLL 150
+ LAD + LR ++
Sbjct 128 KKLADGLAELRSII 141
>gi|269796321|ref|YP_003315776.1| transcriptional regulator [Sanguibacter keddieii DSM 10542]
gi|269098506|gb|ACZ22942.1| transcriptional regulator [Sanguibacter keddieii DSM 10542]
Length=159
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/135 (38%), Positives = 72/135 (54%), Gaps = 0/135 (0%)
Query 20 LGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTTQ 79
LG DL+ +R R A Q I + + R+L+ + G+ + +LAA++ SQPT++
Sbjct 20 LGGDLVVACSRFARTAAQAIDVDVSVTMWRMLSNLAHSGDLSVTELAAIERTSQPTVSKM 79
Query 80 VRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRVL 139
V+RLE GLV+R DP D R+ + +T G L RA A+ P LA L D R L
Sbjct 80 VKRLEAQGLVSRRPDPIDRRSSAVSVTDAGRAALARYRASLTTALAPHLAGLDEDDLRTL 139
Query 140 ADAVDVLRRLLDHAA 154
A+D+L RL A
Sbjct 140 DRALDLLARLTSEVA 154
>gi|325673855|ref|ZP_08153545.1| MarR family transcriptional regulator [Rhodococcus equi ATCC
33707]
gi|325555120|gb|EGD24792.1| MarR family transcriptional regulator [Rhodococcus equi ATCC
33707]
Length=148
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/135 (37%), Positives = 71/135 (53%), Gaps = 0/135 (0%)
Query 20 LGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTTQ 79
L +L++ R RLA+ P R L+ +E QG RI A +D CSQP+ T
Sbjct 11 LLVELVSNAHRFTRLASALSVDDRPRPWMRALSLLEEQGPIRISTFARLDRCSQPSATAL 70
Query 80 VRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRVL 139
++RL + GLV+R DP D RAV + I+ +G R L R + A A+ P A L P +
Sbjct 71 LKRLGEEGLVSRQTDPDDCRAVLVSISDDGRRWLAEARHEVADALTPHFAHLEPEQVARI 130
Query 140 ADAVDVLRRLLDHAA 154
+D + LR ++ AA
Sbjct 131 SDGLGELRAIIRTAA 145
>gi|312141308|ref|YP_004008644.1| marr family transcriptional regulator [Rhodococcus equi 103S]
gi|311890647|emb|CBH49966.1| putative MarR family transcriptional regulator [Rhodococcus equi
103S]
Length=148
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/135 (37%), Positives = 71/135 (53%), Gaps = 0/135 (0%)
Query 20 LGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTTQ 79
L +L++ R RLA+ P R L+ +E QG RI A +D CSQP+ T
Sbjct 11 LLVELVSNAHRFTRLASALSVDDRPRPWMRALSLLEEQGPIRISTFARLDRCSQPSATAL 70
Query 80 VRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRVL 139
++RL + GLV+R DP D RAV + I+ +G R L R + A A+ P A L P +
Sbjct 71 LKRLGEEGLVSRQTDPDDCRAVLVGISDDGRRWLAEARHEVADALTPHFAHLEPEQVARI 130
Query 140 ADAVDVLRRLLDHAA 154
+D + LR ++ AA
Sbjct 131 SDGLGELRAIIRTAA 145
>gi|257067359|ref|YP_003153614.1| transcriptional regulator [Brachybacterium faecium DSM 4810]
gi|256558177|gb|ACU84024.1| transcriptional regulator [Brachybacterium faecium DSM 4810]
Length=161
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/125 (36%), Positives = 69/125 (56%), Gaps = 0/125 (0%)
Query 27 VVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTTQVRRLEDA 86
V ++ +RLA +R ++ + A R++ATIE G R+ ++A + S+PT T ++RLE+
Sbjct 33 VCSQFSRLAARRSEVGVGAVSWRVVATIERHGALRLSEIAERERVSRPTATAVIKRLEEE 92
Query 87 GLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRVLADAVDVL 146
GLV R DP D+R+ + T G L A RA A + L LP + L A +L
Sbjct 93 GLVRRDVDPSDSRSWLVSTTETGSAQLAAWRAQLAVGVGGLLEPLPAEELATLERAAAIL 152
Query 147 RRLLD 151
R++D
Sbjct 153 ARVVD 157
>gi|342860234|ref|ZP_08716886.1| MarR family transcriptional regulator [Mycobacterium colombiense
CECT 3035]
gi|342132612|gb|EGT85841.1| MarR family transcriptional regulator [Mycobacterium colombiense
CECT 3035]
Length=167
Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/107 (43%), Positives = 59/107 (56%), Gaps = 0/107 (0%)
Query 43 LPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTTQVRRLEDAGLVTRTADPGDARAVR 102
L AQ +L T+ QG R+ DLAA + PT T +RRLE GLV R+ DP D RAV
Sbjct 42 LTLAQLSILVTLLDQGPIRMTDLAAHERVRTPTTTVAIRRLEKVGLVKRSRDPSDLRAVL 101
Query 103 IRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRVLADAVDVLRRL 149
+ ITP G A+R A++ L+ LPP+D L A+ L RL
Sbjct 102 VDITPRGRAVHGESLANRRASLASMLSQLPPSDLDTLMQALAPLERL 148
>gi|257068527|ref|YP_003154782.1| transcriptional regulator [Brachybacterium faecium DSM 4810]
gi|256559345|gb|ACU85192.1| transcriptional regulator [Brachybacterium faecium DSM 4810]
Length=163
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/147 (39%), Positives = 75/147 (52%), Gaps = 5/147 (3%)
Query 7 AANRSEVGGPLPGLGADL---LAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIG 63
A S GG L A L L V +R+ R T ++ P Q +LA ++ GE+ G
Sbjct 14 AGEESAGGGENVELAAGLQRVLLVSSRILRSHTASEEVSAP--QFSVLAYLQRTGESTPG 71
Query 64 DLAAVDHCSQPTMTTQVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAA 123
LA DH S P MT + RLE AGLV R A PGD R VR+ +T G + + A R R A
Sbjct 72 ALAEFDHVSPPVMTRILGRLEHAGLVRRDAHPGDGRQVRVTLTDRGQQLVLAGRERRHAW 131
Query 124 IEPQLALLPPADRRVLADAVDVLRRLL 150
+ ++ PA + L DA VL+ +L
Sbjct 132 LRSRIEEATPAQQAALRDASRVLQEIL 158
>gi|111223002|ref|YP_713796.1| MarR family transcriptional regulator [Frankia alni ACN14a]
gi|111150534|emb|CAJ62234.2| Putative MarR-family transcriptional regulator [Frankia alni
ACN14a]
Length=148
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/104 (45%), Positives = 60/104 (58%), Gaps = 0/104 (0%)
Query 51 LATIEAQGEARIGDLAAVDHCSQPTMTTQVRRLEDAGLVTRTADPGDARAVRIRITPEGI 110
L+T+E G R+ DLAA + +QP MT V RL DAGLV R DP D R VR+ +T G
Sbjct 19 LSTLERLGPHRLTDLAAREGVTQPAMTQLVTRLADAGLVARATDPTDGRVVRVHLTEAGR 78
Query 111 RTLTAVRADRAAAIEPQLALLPPADRRVLADAVDVLRRLLDHAA 154
TL A RA R + LA L P +R L+ A+ + L+D A+
Sbjct 79 ATLAARRAKRVERVAGLLAELSPQERAALSAALPAVDALVDLAS 122
>gi|15828456|ref|NP_302719.1| MarR family transcriptional regulator [Mycobacterium leprae TN]
gi|221230933|ref|YP_002504349.1| putative MarR-family regulatory protein [Mycobacterium leprae
Br4923]
gi|13093886|emb|CAC32228.1| putative MarR-family regulatory protein [Mycobacterium leprae]
gi|219934040|emb|CAR72796.1| putative MarR-family regulatory protein [Mycobacterium leprae
Br4923]
Length=243
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/107 (43%), Positives = 60/107 (57%), Gaps = 0/107 (0%)
Query 43 LPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTTQVRRLEDAGLVTRTADPGDARAVR 102
L AQ +L T+ QG R+ DLAA + PT T +RRLE GLV R+ D D RAV
Sbjct 118 LTLAQLSILVTLLDQGPIRMTDLAAHERVRTPTTTVAIRRLEKIGLVKRSRDLSDLRAVL 177
Query 103 IRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRVLADAVDVLRRL 149
+ ITP G A+R AA+ L+ LP +D +L +A+ L+RL
Sbjct 178 VDITPRGRTVHGESLANRRAALTTMLSQLPTSDLNILKNALAPLQRL 224
>gi|240168769|ref|ZP_04747428.1| transcriptional regulatory protein [Mycobacterium kansasii ATCC
12478]
Length=166
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/107 (43%), Positives = 60/107 (57%), Gaps = 0/107 (0%)
Query 43 LPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTTQVRRLEDAGLVTRTADPGDARAVR 102
L AQ +L T+ +G R+ DLAA + PT T +RRLE GLV R+ DP D RAV
Sbjct 42 LTLAQLSILVTLLDRGPIRMTDLAAHERVRTPTTTVAIRRLEKIGLVKRSRDPSDLRAVL 101
Query 103 IRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRVLADAVDVLRRL 149
+ ITP+G A+R AA+ L+ LP +D L +A+ L RL
Sbjct 102 VDITPQGRAVHAESLANRHAALAAMLSQLPHSDLDTLTNALAPLERL 148
>gi|284028467|ref|YP_003378398.1| MarR family transcriptional regulator [Kribbella flavida DSM
17836]
gi|283807760|gb|ADB29599.1| transcriptional regulator, MarR family [Kribbella flavida DSM
17836]
Length=160
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/91 (48%), Positives = 53/91 (59%), Gaps = 0/91 (0%)
Query 61 RIGDLAAVDHCSQPTMTTQVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADR 120
RIG +AA CSQPT TT V LE AGLV R D D RA + +T G + VR+D
Sbjct 68 RIGAIAARVPCSQPTATTTVGSLEAAGLVRRLPDTLDGRATVVELTEHGTDMVAHVRSDA 127
Query 121 AAAIEPQLALLPPADRRVLADAVDVLRRLLD 151
A+ LA+L P DR V+ DA ++L RL D
Sbjct 128 TEALSNMLAVLTPEDRAVVLDAGEILYRLAD 158
>gi|256374642|ref|YP_003098302.1| MarR family transcriptional regulator [Actinosynnema mirum DSM
43827]
gi|255918945|gb|ACU34456.1| transcriptional regulator, MarR family [Actinosynnema mirum DSM
43827]
Length=148
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/132 (34%), Positives = 69/132 (53%), Gaps = 1/132 (0%)
Query 19 GLGADLLAVVARLNR-LATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMT 77
GL + L + RLNR L QR+ + Q L+T+ G G+LAA + P+MT
Sbjct 14 GLASRLRLAIIRLNRRLRAQRVNSTISLTQVSALSTLHKCGPLTPGELAAKEGVQPPSMT 73
Query 78 TQVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRR 137
+ LE+ G TR P D R + ++P G++ + A + R A ++ LA L P DR
Sbjct 74 RVIAALEELGFATRRPHPTDGRQAIVELSPSGMQYINAEVSAREAWLDQHLAELTPEDRA 133
Query 138 VLADAVDVLRRL 149
VL+ A +++ R+
Sbjct 134 VLSRAAEIIDRM 145
>gi|118615972|ref|YP_904304.1| transcriptional regulatory protein [Mycobacterium ulcerans Agy99]
gi|118568082|gb|ABL02833.1| transcriptional regulatory protein [Mycobacterium ulcerans Agy99]
Length=167
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 64/125 (52%), Gaps = 8/125 (6%)
Query 43 LPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTTQVRRLEDAGLVTRTADPGDARAVR 102
L AQ +L T+ +G R+ DLAA + PT T +RRLE GLV R+ DP D RAV
Sbjct 42 LTLAQLSILVTLLDRGPIRMTDLAAHERVRTPTTTVAIRRLEKIGLVKRSRDPSDLRAVL 101
Query 103 IRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRVLADAVDVLRRLL--------DHAA 154
+ ITP+G A+R AA+ L LP +D L A+ L RL + A
Sbjct 102 VDITPQGRSVHAKSLANRHAALAAMLDQLPHSDLETLMTALTPLERLACGEPANAPEDDA 161
Query 155 TTPGR 159
TPGR
Sbjct 162 ATPGR 166
>gi|183980094|ref|YP_001848385.1| transcriptional regulatory protein [Mycobacterium marinum M]
gi|183173420|gb|ACC38530.1| transcriptional regulatory protein [Mycobacterium marinum M]
Length=167
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 64/125 (52%), Gaps = 8/125 (6%)
Query 43 LPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTTQVRRLEDAGLVTRTADPGDARAVR 102
L AQ +L T+ +G R+ DLAA + PT T +RRLE GLV R+ DP D RAV
Sbjct 42 LTLAQLSILVTLLDRGPIRMTDLAAHERVRTPTTTVAIRRLEKIGLVKRSRDPSDLRAVL 101
Query 103 IRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRVLADAVDVLRRLL--------DHAA 154
+ ITP+G A+R AA+ L LP +D L A+ L RL + A
Sbjct 102 VDITPQGRSVHAESLANRHAALAAMLDQLPHSDLETLMTALTPLERLACGEPANAPEDDA 161
Query 155 TTPGR 159
TPGR
Sbjct 162 ATPGR 166
>gi|337769493|emb|CCB78206.1| Transcriptional regulator (modular protein) [Streptomyces cattleya
NRRL 8057]
Length=211
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/143 (40%), Positives = 72/143 (51%), Gaps = 12/143 (8%)
Query 26 AVVARLNRLATQRIQ---------MPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTM 76
AVVARL RLA R+ L Q LA IE G R+G+LA ++ S P+M
Sbjct 72 AVVARL-RLAVARLHRRLVQASSGQGLTYGQLSALARIEQHGPVRLGELAGLERVSAPSM 130
Query 77 TTQVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADR 136
T + L AGL+ RT DP D R+ I +T EG L VR +R+ + ++ L PA R
Sbjct 131 TRTLAPLGAAGLIRRTPDPVDRRSALIELTGEGAHVLDEVRRERSELLAARIEALTPAQR 190
Query 137 RVLADAVDVLRRLLDHAATTPGR 159
L AV VL L + PGR
Sbjct 191 AALEAAVPVLETLAEEPG--PGR 211
>gi|302531283|ref|ZP_07283625.1| predicted protein [Streptomyces sp. AA4]
gi|302440178|gb|EFL11994.1| predicted protein [Streptomyces sp. AA4]
Length=161
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/124 (37%), Positives = 66/124 (54%), Gaps = 0/124 (0%)
Query 27 VVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTTQVRRLEDA 86
VV RL L + L Q +L+ + +G +R+ L+ ++ P+MT VRRLE
Sbjct 15 VVFRLYYLVRRESAQLLTLTQGSVLSELVGRGPSRMSRLSRLERVRMPSMTDVVRRLERL 74
Query 87 GLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRVLADAVDVL 146
G+VTR DP D RAV + TPEG R + A R A + +L L PA+R + A+ L
Sbjct 75 GMVTRRPDPDDGRAVLVEATPEGERFYAEMIAGREAELRARLGRLDPAERAAIDAALPAL 134
Query 147 RRLL 150
+L+
Sbjct 135 TKLI 138
>gi|289425318|ref|ZP_06427095.1| transcriptional regulator, MarR family [Propionibacterium acnes
SK187]
gi|289428591|ref|ZP_06430275.1| transcriptional regulator, MarR family [Propionibacterium acnes
J165]
gi|295130793|ref|YP_003581456.1| transcriptional regulator, MarR family [Propionibacterium acnes
SK137]
gi|335053342|ref|ZP_08546186.1| transcriptional regulator, MarR family [Propionibacterium sp.
434-HC2]
gi|289154296|gb|EFD02984.1| transcriptional regulator, MarR family [Propionibacterium acnes
SK187]
gi|289158285|gb|EFD06504.1| transcriptional regulator, MarR family [Propionibacterium acnes
J165]
gi|291375765|gb|ADD99619.1| transcriptional regulator, MarR family [Propionibacterium acnes
SK137]
gi|333767379|gb|EGL44626.1| transcriptional regulator, MarR family [Propionibacterium sp.
434-HC2]
Length=161
Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/151 (34%), Positives = 70/151 (47%), Gaps = 1/151 (0%)
Query 14 GGPLPG-LGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCS 72
GPL L ADL+ R+ RLA +R +P + R+L T+E G G L+ V+
Sbjct 11 SGPLEAELAADLVLTCGRIQRLAKRRAGIPPSSVTWRVLHTLEVMGTISTGTLSRVEGTR 70
Query 73 QPTMTTQVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLP 132
T T V RLE GLV R DP DAR+ + IT G ++ P L +L
Sbjct 71 PTTTTDIVERLERDGLVARQRDPHDARSRLVEITDAGREYCRNCELSVGESVVPALNMLS 130
Query 133 PADRRVLADAVDVLRRLLDHAATTPGRATRQ 163
DR +L + LRR ++ + R TR
Sbjct 131 DRDRDLLMRVLPALRRAVEVLSENDERTTRN 161
>gi|117929267|ref|YP_873818.1| MarR family transcriptional regulator [Acidothermus cellulolyticus
11B]
gi|117649730|gb|ABK53832.1| transcriptional regulator, MarR family [Acidothermus cellulolyticus
11B]
Length=156
Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/114 (40%), Positives = 65/114 (58%), Gaps = 0/114 (0%)
Query 20 LGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTTQ 79
+ A L VV RL R Q L ++ LA++EA R+ +LAAV++ + P M+
Sbjct 19 IAARLRIVVGRLARAVRQHASGGLTPSETSALASVEAHQPVRLSELAAVENVAPPMMSRV 78
Query 80 VRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPP 133
V RL +GLV+R+ D DARA + +T G RTL +R RAAA+ ++A L P
Sbjct 79 VDRLVRSGLVSRSPDAADARACLLSLTESGRRTLAELRQSRAAALAERIARLAP 132
>gi|323359633|ref|YP_004226029.1| transcriptional regulator [Microbacterium testaceum StLB037]
gi|323276004|dbj|BAJ76149.1| transcriptional regulator [Microbacterium testaceum StLB037]
Length=144
Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/122 (40%), Positives = 62/122 (51%), Gaps = 4/122 (3%)
Query 24 LLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTTQVRRL 83
LL V L R+A Q PAAQ R L + G R+GDLA + +QP MT V +L
Sbjct 10 LLLAVHALTRIAALDTQNDAPAAQWRTLTLLRDNGPQRLGDLATLSRVTQPGMTRLVHQL 69
Query 84 EDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRVLADAV 143
DAGLVTR P D+R I +T EG+ L + A+ P +A + A+ DAV
Sbjct 70 SDAGLVTREPHPDDSRVSVIAVTDEGLVALERWLTQLSDALAPHVADMTDAE----WDAV 125
Query 144 DV 145
V
Sbjct 126 SV 127
>gi|296167084|ref|ZP_06849495.1| MarR family transcriptional regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897574|gb|EFG77169.1| MarR family transcriptional regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=168
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/107 (43%), Positives = 58/107 (55%), Gaps = 0/107 (0%)
Query 43 LPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTTQVRRLEDAGLVTRTADPGDARAVR 102
L AQ +L T+ QG R+ DLAA + PT T +RRLE GLV R+ DP D RAV
Sbjct 43 LTLAQLSILVTLLDQGPIRMTDLAAHERVRTPTTTVAIRRLEKLGLVKRSRDPSDLRAVL 102
Query 103 IRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRVLADAVDVLRRL 149
+ ITP G A+R A++ L+ LP +D L A+ L RL
Sbjct 103 VDITPRGRAVHGESLANRRASLAAMLSQLPASDLSTLMQALAPLERL 149
>gi|331696980|ref|YP_004333219.1| regulatory protein MarR [Pseudonocardia dioxanivorans CB1190]
gi|326951669|gb|AEA25366.1| regulatory protein MarR [Pseudonocardia dioxanivorans CB1190]
Length=163
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/139 (38%), Positives = 70/139 (51%), Gaps = 0/139 (0%)
Query 20 LGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPTMTTQ 79
L A L VV RLNR + +P Q L T+E +G R+ +LA + + PTM+
Sbjct 21 LAARLGLVVGRLNRRIRIDGRESVPPLQLSALVTVEQRGPLRLSELARREAVTAPTMSRV 80
Query 80 VRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRVL 139
+ L+D GLV RT DP DAR V I ++ +G L VR R A + +L L A +
Sbjct 81 LAALDDQGLVVRTVDPDDARGVLITLSAKGAEVLKEVRNHRTALVARRLGRLDAAQLAAV 140
Query 140 ADAVDVLRRLLDHAATTPG 158
DA+ L LL A PG
Sbjct 141 HDALPALEALLVDDAANPG 159
>gi|311893744|dbj|BAJ26152.1| putative MarR family transcriptional regulator [Kitasatospora
setae KM-6054]
Length=148
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/138 (37%), Positives = 73/138 (53%), Gaps = 1/138 (0%)
Query 14 GGPLPGLGADLLAVVARLNR-LATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCS 72
GG P A L V+ARLNR L + AQ LA IE G R+G+LAA++ +
Sbjct 7 GGLDPAELARLRLVIARLNRHLMRASDRQEFTFAQQSALARIEQHGPIRLGELAALERVT 66
Query 73 QPTMTTQVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLP 132
P++T V L DA L++R DP D R+ + + P G+ L +R R+ + + A L
Sbjct 67 APSITRTVASLVDARLISRVPDPNDGRSALVELAPGGVDLLAHIRRRRSELLARRTAELT 126
Query 133 PADRRVLADAVDVLRRLL 150
+R+ L A+ VL RL+
Sbjct 127 APERQALMAALPVLERLV 144
Lambda K H
0.319 0.132 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129924364284
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40