BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2337c Length=372 Score E Sequences producing significant alignments: (Bits) Value gi|15609474|ref|NP_216853.1| hypothetical protein Rv2337c [Mycob... 741 0.0 gi|15841841|ref|NP_336878.1| hypothetical protein MT2400 [Mycoba... 738 0.0 gi|289570471|ref|ZP_06450698.1| hypothetical protein TBJG_00838 ... 736 0.0 gi|308232104|ref|ZP_07414933.2| hypothetical protein TMAG_00526 ... 723 0.0 gi|254551384|ref|ZP_05141831.1| hypothetical protein Mtube_13135... 720 0.0 gi|333983028|ref|YP_004512238.1| hypothetical protein Metme_1312... 133 4e-29 gi|224369119|ref|YP_002603283.1| hypothetical protein HRM2_20180... 102 8e-20 gi|162454683|ref|YP_001617050.1| hypothetical protein sce6403 [S... 98.6 1e-18 gi|224371717|ref|YP_002605881.1| hypothetical protein HRM2_46610... 98.6 1e-18 gi|323698630|ref|ZP_08110542.1| UBA/THIF-type NAD/FAD binding pr... 94.0 3e-17 gi|78223252|ref|YP_384999.1| hypothetical protein Gmet_2045 [Geo... 93.6 5e-17 gi|256830000|ref|YP_003158728.1| UBA/THIF-type NAD/FAD binding p... 85.9 1e-14 gi|218885796|ref|YP_002435117.1| hypothetical protein DvMF_0692 ... 84.7 2e-14 gi|153002905|ref|YP_001377230.1| hypothetical protein Anae109_00... 83.2 6e-14 gi|311746240|ref|ZP_07720025.1| UBA/THIF-type NAD/FAD binding fo... 77.0 4e-12 gi|46562213|ref|YP_009074.1| hypothetical protein DVUA0034 [Desu... 76.6 6e-12 gi|120586929|ref|YP_961274.1| hypothetical protein Dvul_3075 [De... 75.9 1e-11 gi|342906343|gb|ABB37623.2| UBA/THIF-type NAD/FAD binding protei... 72.0 2e-10 gi|78355869|ref|YP_387318.1| hypothetical protein Dde_0822 [Desu... 71.6 2e-10 gi|149277960|ref|ZP_01884099.1| hypothetical protein PBAL39_2476... 69.7 8e-10 gi|337286795|ref|YP_004626268.1| nitroreductase [Thermodesulfata... 68.2 2e-09 gi|298675136|ref|YP_003726886.1| hypothetical protein Metev_1217... 67.4 4e-09 gi|238020247|ref|ZP_04600673.1| hypothetical protein GCWU000324_... 66.6 6e-09 gi|213963052|ref|ZP_03391311.1| conserved hypothetical protein [... 65.5 1e-08 gi|325106053|ref|YP_004275707.1| UBA/THIF-type NAD/FAD binding p... 63.2 7e-08 gi|110639176|ref|YP_679385.1| hypothetical protein CHU_2794 [Cyt... 62.0 1e-07 gi|313204891|ref|YP_004043548.1| nitroreductase [Paludibacter pr... 58.5 2e-06 gi|254416948|ref|ZP_05030696.1| hypothetical protein MC7420_3443... 58.2 2e-06 gi|311693763|gb|ADP96636.1| nitroreductase-like protein [Marinob... 57.4 4e-06 gi|298368905|ref|ZP_06980223.1| conserved hypothetical protein [... 56.6 6e-06 gi|255036151|ref|YP_003086772.1| hypothetical protein Dfer_2389 ... 55.8 1e-05 gi|228471792|ref|ZP_04056565.1| conserved hypothetical protein [... 55.5 1e-05 gi|254425513|ref|ZP_05039230.1| hypothetical protein S7335_79 [S... 55.1 2e-05 gi|330808977|ref|YP_004353439.1| hypothetical protein PSEBR_a216... 55.1 2e-05 gi|344339230|ref|ZP_08770160.1| hypothetical protein ThimaDRAFT_... 54.7 2e-05 gi|189347719|ref|YP_001944248.1| hypothetical protein Clim_2245 ... 52.0 1e-04 gi|258655342|ref|YP_003204498.1| hypothetical protein Namu_5243 ... 52.0 2e-04 gi|271966171|ref|YP_003340367.1| hypothetical protein Sros_4801 ... 51.6 2e-04 gi|119357281|ref|YP_911925.1| hypothetical protein Cpha266_1474 ... 50.4 5e-04 gi|339050901|ref|ZP_08647729.1| hypothetical protein imdm_588 [g... 50.4 5e-04 gi|217969907|ref|YP_002355141.1| hypothetical protein Tmz1t_1487... 50.1 6e-04 gi|271965011|ref|YP_003339207.1| hypothetical protein Sros_3528 ... 49.3 0.001 gi|240171846|ref|ZP_04750505.1| hypothetical protein MkanA1_2120... 49.3 0.001 gi|120403535|ref|YP_953364.1| hypothetical protein Mvan_2547 [My... 48.9 0.001 gi|256376040|ref|YP_003099700.1| nitroreductase [Actinosynnema m... 48.5 0.002 gi|120402964|ref|YP_952793.1| hypothetical protein Mvan_1968 [My... 48.1 0.002 gi|82701508|ref|YP_411074.1| UBA/THIF-type NAD/FAD binding domai... 47.8 0.003 gi|331700104|ref|YP_004336343.1| hypothetical protein Psed_6394 ... 47.8 0.003 gi|296170987|ref|ZP_06852482.1| conserved hypothetical protein [... 47.4 0.004 gi|297196861|ref|ZP_06914258.1| conserved hypothetical protein [... 47.4 0.004 >gi|15609474|ref|NP_216853.1| hypothetical protein Rv2337c [Mycobacterium tuberculosis H37Rv] gi|148662165|ref|YP_001283688.1| hypothetical protein MRA_2357 [Mycobacterium tuberculosis H37Ra] gi|167969890|ref|ZP_02552167.1| hypothetical protein MtubH3_18429 [Mycobacterium tuberculosis H37Ra] gi|1781244|emb|CAB06154.1| HYPOTHETICAL PROTEIN Rv2337c [Mycobacterium tuberculosis H37Rv] gi|148506317|gb|ABQ74126.1| hypothetical protein MRA_2357 [Mycobacterium tuberculosis H37Ra] Length=372 Score = 741 bits (1913), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/372 (100%), Positives = 372/372 (100%), Gaps = 0/372 (0%) Query 1 MRAGRWGPGMTGLDPAEFLSLVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWRSAPEH 60 MRAGRWGPGMTGLDPAEFLSLVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWRSAPEH Sbjct 1 MRAGRWGPGMTGLDPAEFLSLVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWRSAPEH 60 Query 61 RRIMSLVAIGAAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEGA 120 RRIMSLVAIGAAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEGA Sbjct 61 RRIMSLVAIGAAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEGA 120 Query 121 IERRRTNRRVRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETER 180 IERRRTNRRVRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETER Sbjct 121 IERRRTNRRVRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETER 180 Query 181 FRSRELHEELFSAVRFDIGWTASSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGM 240 FRSRELHEELFSAVRFDIGWTASSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGM Sbjct 181 FRSRELHEELFSAVRFDIGWTASSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGM 240 Query 241 HHALGLRAAYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASA 300 HHALGLRAAYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASA Sbjct 241 HHALGLRAAYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASA 300 Query 301 VLSLPACEWVAPHVRAALVGGWNLLAPGHWPMMVFRIGHARAPSVRTMRQSVEAYCYAPA 360 VLSLPACEWVAPHVRAALVGGWNLLAPGHWPMMVFRIGHARAPSVRTMRQSVEAYCYAPA Sbjct 301 VLSLPACEWVAPHVRAALVGGWNLLAPGHWPMMVFRIGHARAPSVRTMRQSVEAYCYAPA 360 Query 361 ERSGSDSESRFA 372 ERSGSDSESRFA Sbjct 361 ERSGSDSESRFA 372 >gi|15841841|ref|NP_336878.1| hypothetical protein MT2400 [Mycobacterium tuberculosis CDC1551] gi|31793521|ref|NP_856014.1| hypothetical protein Mb2365c [Mycobacterium bovis AF2122/97] gi|121638224|ref|YP_978448.1| hypothetical protein BCG_2359c [Mycobacterium bovis BCG str. Pasteur 1173P2] 46 more sequence titles Length=372 Score = 738 bits (1904), Expect = 0.0, Method: Compositional matrix adjust. Identities = 371/372 (99%), Positives = 371/372 (99%), Gaps = 0/372 (0%) Query 1 MRAGRWGPGMTGLDPAEFLSLVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWRSAPEH 60 MRAGRWGPGMTGLDPAEFLSLVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWRSAPEH Sbjct 1 MRAGRWGPGMTGLDPAEFLSLVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWRSAPEH 60 Query 61 RRIMSLVAIGAAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEGA 120 RRIMSLVAIGAAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIE A Sbjct 61 RRIMSLVAIGAAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEVA 120 Query 121 IERRRTNRRVRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETER 180 IERRRTNRRVRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETER Sbjct 121 IERRRTNRRVRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETER 180 Query 181 FRSRELHEELFSAVRFDIGWTASSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGM 240 FRSRELHEELFSAVRFDIGWTASSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGM Sbjct 181 FRSRELHEELFSAVRFDIGWTASSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGM 240 Query 241 HHALGLRAAYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASA 300 HHALGLRAAYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASA Sbjct 241 HHALGLRAAYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASA 300 Query 301 VLSLPACEWVAPHVRAALVGGWNLLAPGHWPMMVFRIGHARAPSVRTMRQSVEAYCYAPA 360 VLSLPACEWVAPHVRAALVGGWNLLAPGHWPMMVFRIGHARAPSVRTMRQSVEAYCYAPA Sbjct 301 VLSLPACEWVAPHVRAALVGGWNLLAPGHWPMMVFRIGHARAPSVRTMRQSVEAYCYAPA 360 Query 361 ERSGSDSESRFA 372 ERSGSDSESRFA Sbjct 361 ERSGSDSESRFA 372 >gi|289570471|ref|ZP_06450698.1| hypothetical protein TBJG_00838 [Mycobacterium tuberculosis T17] gi|289544225|gb|EFD47873.1| hypothetical protein TBJG_00838 [Mycobacterium tuberculosis T17] Length=372 Score = 736 bits (1901), Expect = 0.0, Method: Compositional matrix adjust. Identities = 370/372 (99%), Positives = 371/372 (99%), Gaps = 0/372 (0%) Query 1 MRAGRWGPGMTGLDPAEFLSLVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWRSAPEH 60 MRAGRWGPGMTGLDPAEFLSLV+AAALAPSADNRREVQLEHAGRRVRLWGDQTWRSAPEH Sbjct 1 MRAGRWGPGMTGLDPAEFLSLVDAAALAPSADNRREVQLEHAGRRVRLWGDQTWRSAPEH 60 Query 61 RRIMSLVAIGAAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEGA 120 RRIMSLVAIGAAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIE A Sbjct 61 RRIMSLVAIGAAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEVA 120 Query 121 IERRRTNRRVRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETER 180 IERRRTNRRVRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETER Sbjct 121 IERRRTNRRVRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETER 180 Query 181 FRSRELHEELFSAVRFDIGWTASSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGM 240 FRSRELHEELFSAVRFDIGWTASSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGM Sbjct 181 FRSRELHEELFSAVRFDIGWTASSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGM 240 Query 241 HHALGLRAAYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASA 300 HHALGLRAAYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASA Sbjct 241 HHALGLRAAYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASA 300 Query 301 VLSLPACEWVAPHVRAALVGGWNLLAPGHWPMMVFRIGHARAPSVRTMRQSVEAYCYAPA 360 VLSLPACEWVAPHVRAALVGGWNLLAPGHWPMMVFRIGHARAPSVRTMRQSVEAYCYAPA Sbjct 301 VLSLPACEWVAPHVRAALVGGWNLLAPGHWPMMVFRIGHARAPSVRTMRQSVEAYCYAPA 360 Query 361 ERSGSDSESRFA 372 ERSGSDSESRFA Sbjct 361 ERSGSDSESRFA 372 >gi|308232104|ref|ZP_07414933.2| hypothetical protein TMAG_00526 [Mycobacterium tuberculosis SUMu001] gi|308379174|ref|ZP_07485367.2| hypothetical protein TMJG_00600 [Mycobacterium tuberculosis SUMu010] gi|308380336|ref|ZP_07489586.2| hypothetical protein TMKG_00597 [Mycobacterium tuberculosis SUMu011] gi|308404729|ref|ZP_07494120.2| hypothetical protein TMLG_03302 [Mycobacterium tuberculosis SUMu012] gi|308215058|gb|EFO74457.1| hypothetical protein TMAG_00526 [Mycobacterium tuberculosis SUMu001] gi|308357937|gb|EFP46788.1| hypothetical protein TMJG_00600 [Mycobacterium tuberculosis SUMu010] gi|308361874|gb|EFP50725.1| hypothetical protein TMKG_00597 [Mycobacterium tuberculosis SUMu011] gi|308365458|gb|EFP54309.1| hypothetical protein TMLG_03302 [Mycobacterium tuberculosis SUMu012] Length=363 Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/363 (100%), Positives = 363/363 (100%), Gaps = 0/363 (0%) Query 10 MTGLDPAEFLSLVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWRSAPEHRRIMSLVAI 69 MTGLDPAEFLSLVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWRSAPEHRRIMSLVAI Sbjct 1 MTGLDPAEFLSLVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWRSAPEHRRIMSLVAI 60 Query 70 GAAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEGAIERRRTNRR 129 GAAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEGAIERRRTNRR Sbjct 61 GAAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEGAIERRRTNRR 120 Query 130 VRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSRELHEE 189 VRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSRELHEE Sbjct 121 VRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSRELHEE 180 Query 190 LFSAVRFDIGWTASSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGMHHALGLRAA 249 LFSAVRFDIGWTASSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGMHHALGLRAA Sbjct 181 LFSAVRFDIGWTASSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGMHHALGLRAA 240 Query 250 YLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASAVLSLPACEW 309 YLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASAVLSLPACEW Sbjct 241 YLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASAVLSLPACEW 300 Query 310 VAPHVRAALVGGWNLLAPGHWPMMVFRIGHARAPSVRTMRQSVEAYCYAPAERSGSDSES 369 VAPHVRAALVGGWNLLAPGHWPMMVFRIGHARAPSVRTMRQSVEAYCYAPAERSGSDSES Sbjct 301 VAPHVRAALVGGWNLLAPGHWPMMVFRIGHARAPSVRTMRQSVEAYCYAPAERSGSDSES 360 Query 370 RFA 372 RFA Sbjct 361 RFA 363 >gi|254551384|ref|ZP_05141831.1| hypothetical protein Mtube_13135 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|308369691|ref|ZP_07418712.2| hypothetical protein TMBG_00882 [Mycobacterium tuberculosis SUMu002] gi|308370978|ref|ZP_07423442.2| hypothetical protein TMCG_00432 [Mycobacterium tuberculosis SUMu003] 16 more sequence titles Length=363 Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/363 (99%), Positives = 362/363 (99%), Gaps = 0/363 (0%) Query 10 MTGLDPAEFLSLVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWRSAPEHRRIMSLVAI 69 MTGLDPAEFLSLVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWRSAPEHRRIMSLVAI Sbjct 1 MTGLDPAEFLSLVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWRSAPEHRRIMSLVAI 60 Query 70 GAAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEGAIERRRTNRR 129 GAAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIE AIERRRTNRR Sbjct 61 GAAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEVAIERRRTNRR 120 Query 130 VRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSRELHEE 189 VRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSRELHEE Sbjct 121 VRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSRELHEE 180 Query 190 LFSAVRFDIGWTASSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGMHHALGLRAA 249 LFSAVRFDIGWTASSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGMHHALGLRAA Sbjct 181 LFSAVRFDIGWTASSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGMHHALGLRAA 240 Query 250 YLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASAVLSLPACEW 309 YLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASAVLSLPACEW Sbjct 241 YLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASAVLSLPACEW 300 Query 310 VAPHVRAALVGGWNLLAPGHWPMMVFRIGHARAPSVRTMRQSVEAYCYAPAERSGSDSES 369 VAPHVRAALVGGWNLLAPGHWPMMVFRIGHARAPSVRTMRQSVEAYCYAPAERSGSDSES Sbjct 301 VAPHVRAALVGGWNLLAPGHWPMMVFRIGHARAPSVRTMRQSVEAYCYAPAERSGSDSES 360 Query 370 RFA 372 RFA Sbjct 361 RFA 363 >gi|333983028|ref|YP_004512238.1| hypothetical protein Metme_1312 [Methylomonas methanica MC09] gi|333807069|gb|AEF99738.1| hypothetical protein Metme_1312 [Methylomonas methanica MC09] Length=358 Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 98/363 (27%), Positives = 173/363 (48%), Gaps = 25/363 (6%) Query 10 MTGLDPAEFLSLVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWRSAP-EHRRIMSLVA 68 M + + L+E APSADN + + + LW DQ + ++ + ++ Sbjct 1 MNTISEKNIMKLIEVGIRAPSADNGQPWKFKLLDDGFELWLDQDNMGLFFDVNQVATQMS 60 Query 69 IGAAVENVKLRAGRLGFETKVCWFPD-SGNPGLVAEIDV-DRLPQTRVDPIEGAIERRRT 126 GA +ENV L A +GF T + +F + SG +A V DR V+ + I R T Sbjct 61 CGALIENVTLLADAMGFATSISYFNEASGKFAQLAFASVGDR---GDVESVTRTIFNRYT 117 Query 127 NRRVRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSREL 186 +R + +S ++ L + +LH + +P+ RK I+R + +T RF + + Sbjct 118 DRNLFQFHKKISNSQMAELVSLVQSDRNYRLHTYQTPQDRKAIIRTITATDTIRFIHKRI 177 Query 187 HEELFSAVRFDIGWTASSD-DGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGMHHALG 245 H + + +RF G TA + DGL +L +E++M P+ R L+ W + +LL +G+HH + Sbjct 178 HNDFYHVLRF--GDTAQKNRDGLAAATLGIESFMIPVLRMLKPWWLTKLLNYIGLHHVMA 235 Query 246 LRAAYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASAVLSLP 305 LR +LP R AP + ++T + + G + +R WL+ G +QP A L L Sbjct 236 LRGTWLPMRSAPVIVSITHK--GGADYVEFGRIMQRFWLQANEAGLSVQPLGALP-LFLA 292 Query 306 ACE------WVAPHVR--AALVGGWNLLAP-----GHWPMMVFRIGHARAPSVRTMRQSV 352 C + + ++ A+ + + P +M+FR+G+A+ R R+ V Sbjct 293 RCHLLQGEGFTSDQLKMLKAVTDDFARITPLFNKEADQIVMLFRLGYAKKNKPRAFRRDV 352 Query 353 EAY 355 E++ Sbjct 353 ESF 355 >gi|224369119|ref|YP_002603283.1| hypothetical protein HRM2_20180 [Desulfobacterium autotrophicum HRM2] gi|223691836|gb|ACN15119.1| putative dinucleotide-utilizing biosynthesis family protein (molybdopterin and thiamine biosynthesis family protein) [Desulfobacterium autotrophicum HRM2] Length=679 Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 82/349 (24%), Positives = 148/349 (43%), Gaps = 20/349 (5%) Query 21 LVEAAALAPSADNRREVQLEHAGRRVRLWGDQTW-RSAPEHRRIMSLVAIGAAVENVKLR 79 ++ A APS DN + + ++ L+ ++ RS R+I S+++ G +EN+++ Sbjct 331 ILRAGIQAPSGDNAQPWRFASNENQIFLYLNRDKDRSFFNVRQIASIISCGCVLENMRIA 390 Query 80 AGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEGAIERRRTNRRVRFRGPPLSQ 139 A G + ++ + PDS N L+A + + + + D + I +R TNR+ R + Sbjct 391 ASAFGLQAEIKYLPDSSNSDLMAAVSLTQ-EECPKDKLADEIWKRHTNRKPYNR-KFVPD 448 Query 140 GELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSRELHEELFSAVRFDIG 199 L +L I G +LH+ P+ K++ +++ + R R LHE L +RF Sbjct 449 SVLESLHKTIDSIPGAKLHFITKPDDLKKLAKIIYQVDQIRTEHRPLHEHLMEMIRFTDH 508 Query 200 WTASSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGMHHALGLRAAYLPCRLAPHV 259 + DG P +LE + R W V+ ++ G+ + ++ +Y + V Sbjct 509 DALAKKDGFPLKNLEAGVAGELFLKATRLWAVMNIVNKTGLGRMVAVQ-SYKGILDSSGV 567 Query 260 GALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASAVLSL-----PACEWVAPHV 314 T L G ER WL T G ++QP A + L E+ H Sbjct 568 ALFTVDGQEDKDFLKGGQALERTWLTLTSQGLDMQPMTAVTLFYLRWILNGKDEFQRKHQ 627 Query 315 R---------AALVGGWNLLAPGHWPMMVFRIGHARAPSVRTMRQSVEA 354 + ++L G++ +M+FR G+ RT+R A Sbjct 628 KVLEGIEKKYSSLFAGFDFKKESQ--VMLFRFGYGEPIKCRTLRMETPA 674 >gi|162454683|ref|YP_001617050.1| hypothetical protein sce6403 [Sorangium cellulosum 'So ce 56'] gi|161165265|emb|CAN96570.1| possible molybdopterin biosynthesis protein [Sorangium cellulosum 'So ce 56'] Length=768 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 94/294 (32%), Positives = 129/294 (44%), Gaps = 8/294 (2%) Query 9 GMTGLDPAEFLSLVEAAALAPSADNRREVQLEHAGRRVRLWGDQT-WRSAPEHRRIMSLV 67 G LDPA LVEA APS N + H GRR+ L+ D+ S + + +V Sbjct 404 GAVALDPARLRRLVEAGVAAPSGGNCQPWLWVHEGRRLGLFHDRARSESLADFQGAGGVV 463 Query 68 AIGAAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLP-----QTRVDPIEGAIE 122 A+GAA ENV L A R G +V FP G+ L A P + +D + AI Sbjct 464 ALGAAAENVVLAAHREGLSVRVSPFPREGDEDLAATFAFFGAPTPGAEEHALDGLADAIG 523 Query 123 RRRTNRRVRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFR 182 R TNRR R P L++ AL A I G +L ++P +I L+ + R Sbjct 524 LRHTNRRPGQRAP-LAEEHRAALRAAVESIPGARLGLLEAPAELDEIGALIGAGDRLRML 582 Query 183 SRELHEELFSAVRFDIGWTASSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGMHH 242 +R+ H ++ VR+ + DGL G+LE+ F+ R +R L L+R G Sbjct 583 ARQTHADMMREVRWTEAEAEARRDGLFVGTLELSPTDLAGFKICRDYRALELVRRWGGGR 642 Query 243 ALGLRAAYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPF 296 L R A R A VG +T + G ER WL T LG + P Sbjct 643 GLE-RMAQKAIRCAAAVGLITLPRARLTDYFQGGRAVERAWLTATQLGIAVYPM 695 >gi|224371717|ref|YP_002605881.1| hypothetical protein HRM2_46610 [Desulfobacterium autotrophicum HRM2] gi|223694434|gb|ACN17717.1| UBA/THIF-type NAD/FAD binding family protein [Desulfobacterium autotrophicum HRM2] Length=681 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 83/343 (25%), Positives = 143/343 (42%), Gaps = 19/343 (5%) Query 21 LVEAAALAPSADNRREVQLEHAGRRVRLWGDQTW-RSAPEHRRIMSLVAIGAAVENVKLR 79 +++A APS DN + + R+ L+ D+ S ++ S+++ GA +EN+K+ Sbjct 331 IIKAGIQAPSGDNVQPWKFAKTNNRITLYLDKAADESFFNVHQMASVISCGAVIENMKIT 390 Query 80 AGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEGAIERRRTNRRVRFRGPPLSQ 139 A G + + + G +A++D+ D + I +R+TNR++ F SQ Sbjct 391 ATGFGLKADLSY----GEGDTMAQVDLSINDAVEKDLLADYIWKRKTNRKL-FEKRKASQ 445 Query 140 GELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSRELHEELFSAVRFDIG 199 G L L I G +H+ ++ +++ R+V A+ R ++LHE F +RF Sbjct 446 GLLVELRDSIQNIQGTGIHFITDTDSLEKLARVVSKADRIRTERQDLHEHFFKMIRFSPE 505 Query 200 WTASSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGMHHALGLRAAYLPCRLAPHV 259 T DG +LE R R W V+ + +G + +AAY + Sbjct 506 ETLDKRDGFYIKNLEAGVDGEAFLRTTRSWPVMNIANKLGFGKIVA-KAAYDALIHSSGA 564 Query 260 GALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASAVLSL-------PACEWVAP 312 + L G ER+WL + G ELQP A + L A + Sbjct 565 ALVVVRGINTESYLNGGRALERVWLTLSRYGFELQPMTAITLFLLRKQLDGDGAFDSKHR 624 Query 313 HVRAALVGGWNLLAPG-----HWPMMVFRIGHARAPSVRTMRQ 350 + + G + L P +M+FR G A +T+R+ Sbjct 625 KLLNEIRGEYGALFPDCDFTQDGQVMLFRFGKASQIKYQTLRK 667 >gi|323698630|ref|ZP_08110542.1| UBA/THIF-type NAD/FAD binding protein [Desulfovibrio sp. ND132] gi|323458562|gb|EGB14427.1| UBA/THIF-type NAD/FAD binding protein [Desulfovibrio desulfuricans ND132] Length=677 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 96/350 (28%), Positives = 146/350 (42%), Gaps = 20/350 (5%) Query 21 LVEAAALAPSADNRREVQLEHAGRRVRLWGDQ-TWRSAPEHRRIMSLVAIGAAVENVKLR 79 ++ A APS DN + + G R+ L D+ T S R+ S+VA GAA+EN+ L Sbjct 328 VISAGVQAPSGDNCQPWRFSGKGERIVLSLDKGTDESFFNVRQAASIVACGAAMENMTLA 387 Query 80 AGRLGFETKVCWFPDSGNPGL-VAEIDVDRLPQTRVDPIEGAIERRRTNRRVRFRGPPLS 138 A G + +V P+ G + +A + + + + A+ R TNR+ R P+S Sbjct 388 AQACGLKPEVELRPEEGAGEIRLAALTLKQGEDVHEPVLHDAVWLRCTNRKFYSR-KPVS 446 Query 139 QGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSRELHEELFSAVRFDI 198 G + G L W + + K+ V LA+ R R LHE L + +RF Sbjct 447 DGVWEHIREAVERFPGTTLQWISAQDQLKKFAESVCLADRIRTEHRGLHEHLNAMIRFTQ 506 Query 199 GWTASSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGMHHALGLRAAYLPCRLAPH 258 + DG P G+LE + R W V++ L T+G + + R + Sbjct 507 KDAEETRDGFPLGNLEAGRAGNLFLKATRSWSVMKALNTLGASRGVAAHSGKGILR-SGG 565 Query 259 VGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASAVLSLPACEWV-------A 311 VG ++T AG ER WL T G QP AA A+ L W+ + Sbjct 566 VGLISTQALDTESLFLAGRALERAWLTFTHYGIRFQPAAAPALFRL---RWLLEGETSFS 622 Query 312 PHVRAALVGGWNL---LAPGHW---PMMVFRIGHARAPSVRTMRQSVEAY 355 P L W+L PG P++ FR+G T R+ + A+ Sbjct 623 PAHGKLLGRSWSLAEECFPGFLASRPVLFFRVGFGPGIKYGTYRKPLTAF 672 >gi|78223252|ref|YP_384999.1| hypothetical protein Gmet_2045 [Geobacter metallireducens GS-15] gi|78194507|gb|ABB32274.1| hypothetical protein Gmet_2045 [Geobacter metallireducens GS-15] Length=351 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 93/355 (27%), Positives = 153/355 (44%), Gaps = 17/355 (4%) Query 17 EFLSLVEAAALAPSADNRREVQLEHAGRRVRLWG--DQTWRSAPEHRRIMSLVAIGAAVE 74 ++ ++EAA APS +N + + G +R++ DQ H+R S VA GA +E Sbjct 2 KYREILEAAVRAPSGENCQPWRFVMEGDVIRIFNIPDQDTSLFNLHQR-ASYVAHGALLE 60 Query 75 NVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEGAIERRRTNRRVRFRG 134 N+ + A G+ + FPDS P LVA + + P D + I +R TNR+ R+ G Sbjct 61 NLSIAAPAFGYAPDISLFPDSHVPNLVAAVRMTEGPSFD-DSLYPYIPKRCTNRK-RYNG 118 Query 135 PPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSRELHEELFSAV 194 LS E L + A + G ++ S + + ++ + L + F + LH LF V Sbjct 119 GALSAAESQTLLSVAERVPGGKVALTGSVQDKAEVAEVNALNDRLVFENEHLHAFLFEHV 178 Query 195 RFDIGWTASSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGMHHALGLRAAYLPCR 254 R+ DGL +LE+ F L+ W ++ L+ G+ + A L Sbjct 179 RWSDAEARERGDGLDIKTLELAPPDSLAFPLLKSWPLVDFLKNFGVPRIIAGSARKLALS 238 Query 255 LAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASAVLSLPACEWVAPHV 314 A +G ++ + AG + ER+WL T LG Q +L + ++ Sbjct 239 -AAAIGVVSVPGKGDKDCIAAGRLIERVWLEATKLGLSFQLMTGITLLMRRVLDGETENI 297 Query 315 RAA----LVGGWNLLA------PGHWPMMVFRIGHARAPSVRTMRQSVEAYCYAP 359 + + + LA G +M FR+G PSV +MR ++ AP Sbjct 298 SSQHGELIKKAYGTLANRFGVEDGSLFIM-FRVGRCGPPSVYSMRYPIDKVIDAP 351 >gi|256830000|ref|YP_003158728.1| UBA/THIF-type NAD/FAD binding protein [Desulfomicrobium baculatum DSM 4028] gi|256579176|gb|ACU90312.1| UBA/THIF-type NAD/FAD binding protein [Desulfomicrobium baculatum DSM 4028] Length=679 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 73/283 (26%), Positives = 122/283 (44%), Gaps = 4/283 (1%) Query 21 LVEAAALAPSADNRREVQLEHAGRRVRLWGD-QTWRSAPEHRRIMSLVAIGAAVENVKLR 79 L++AA APS DN + Q AG + ++ D + S R+ S++A GAA+EN++L Sbjct 332 LLQAAVQAPSGDNVQPWQFRLAGNDIHVFLDPEADVSFFNVRQTASIIACGAAMENIRLA 391 Query 80 AGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEGAIERRRTNRRVRFRGPPLSQ 139 A +G + PD+ L+A + + T DP+ I R TNRR + PL + Sbjct 392 ATTMGMDATTQIRPDAAQENLLATVRIQPGDHT-ADPLARHIWTRCTNRR-PYSKRPLPE 449 Query 140 GELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSRELHEELFSAVRFDIG 199 L + LH +++ +++ LA+ R + LHE S +RF++ Sbjct 450 WVHNDLKTRIRSMPEAHLHLLTGRAQLRKLAKVIYLADRIRTEHQGLHEHFTSMIRFNMK 509 Query 200 WTASSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGMHHALGLRAAYLPCRLAPHV 259 DGLP +LE R + W +R+ +G+ + L +A + Sbjct 510 EAEQRRDGLPLKNLEAGLAGEAFLRLTKPWPAMRVANGIGLGRLVALHSAQGILE-SGAA 568 Query 260 GALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASAVL 302 G + + G +RIWL G ++QP A + Sbjct 569 GMVVVDGFETRDFMLGGQALQRIWLAMEHHGLQMQPMTAVTLF 611 >gi|218885796|ref|YP_002435117.1| hypothetical protein DvMF_0692 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756750|gb|ACL07649.1| UBA/THIF-type NAD/FAD binding protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length=968 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 95/349 (28%), Positives = 147/349 (43%), Gaps = 24/349 (6%) Query 8 PGMTGL----DPAEFLSLVEAAALAPSADNRR--EVQLEHAGRRVRL--WGDQTWRSAPE 59 P M GL PA + +AA APS DN + + L G + D ++ + Sbjct 602 PEMVGLRQDIPPATLEYIAQAATRAPSGDNVQPWRIALHETGIHIHAARHADDSFFN--- 658 Query 60 HRRIMSLVAIGAAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEG 119 +R++ +L+A GAAV+N AG +G + + FPD + VA + + + + Sbjct 659 YRQVATLLACGAAVQNAVFAAGSVGLDADLSLFPDEQDHNRVASLHCTPVGVQSHEIMAA 718 Query 120 AIERRRTNRRVRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETE 179 A+ RR TNRR+ + P+ + L W P RK + + V LA+ Sbjct 719 ALWRRHTNRRM-YSASPIPPAVRDRIDHIVDEQQDATLAWAADPAQRKALAKAVYLADRV 777 Query 180 RFRSRELHEELFSAVRFDIGWTASSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVG 239 R +LHE L +RF+ DGLP G+LE R LR W + G Sbjct 778 RVERPDLHEHLMRFIRFE-PQKGPYGDGLPLGNLEAGPLGELYLRSLRPWSAMHAANQAG 836 Query 240 MHHALGLRAAYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAAS 299 + + L A R + V L + + + + AG ++R W +G LQP AA Sbjct 837 IGRLMPLHGALSVLR-SGGVALLLANGEAETDIVRAGMAWQRAWCALEHMGYALQPLAAL 895 Query 300 AV----LSLPACEWVAPHVRAALVGGWNLLAPG------HWPMMVFRIG 338 + + L E ++P + L W LLA P+M+FR G Sbjct 896 PLLHLRIRLGDAETLSPCHVSLLEKAWRLLAEALPHPSDKLPVMLFRTG 944 >gi|153002905|ref|YP_001377230.1| hypothetical protein Anae109_0026 [Anaeromyxobacter sp. Fw109-5] gi|152026478|gb|ABS24246.1| UBA/THIF-type NAD/FAD binding protein [Anaeromyxobacter sp. Fw109-5] Length=817 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 104/358 (30%), Positives = 154/358 (44%), Gaps = 22/358 (6%) Query 13 LDPAEFLSLVEAAALAPSADNRREVQLEHAGRRVRLWGDQT-WRSAPEHRRIMSLVAIGA 71 LD LV A LAPS N + + G+R+RL D RS +HR + S +A GA Sbjct 435 LDAQRVRELVWLATLAPSGGNCQPWRFSWDGKRLRLVHDAARSRSFLDHRDLASWLAFGA 494 Query 72 AVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQT------RVDPIEGAIERRR 125 AVENV L A +G + V PD G+P V ++ R T V + AI R Sbjct 495 AVENVALAAAAMGLDAAVELRPDPGDPAAVCDL---RFAATGGAAPASVVALAAAIPERV 551 Query 126 TNRRVRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSRE 185 TNR++ R PL++ L A + G LH + PE + ++ + RF SR Sbjct 552 TNRKLAPRA-PLARHAHDLLLRVAAEVPGAALHLVEDPERLAALGEVLGRGDRLRFLSRT 610 Query 186 LHEELFSAVRFDIGWTASSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGMHHALG 245 +H E+ +R+ ++ DGL +LE+ + R + W + L+ +G AL Sbjct 611 MHREMMGELRWSAEEARATRDGLDVATLELSGADQAGLRVMSSWAAMELVGRLGGGRALE 670 Query 246 LRAAYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAA----SAV 301 + A A G ++ G +R+WL+ T+LG QP A Sbjct 671 -KPAARAMAAASAAGLVSVPEHTREAYFAGGRAMQRVWLQATVLGLAFQPMTPLTYLFAR 729 Query 302 LSLPACEWVAPHVRAA---LVGGWNLLAP---GHWPMMVFRIGHARAPSVRTMRQSVE 353 L+ E + P L G + L P G M+FR+ A S R +R+ VE Sbjct 730 LASGGGEGLTPAEATTLRELRGRLDRLFPDARGRGEPMLFRLAVAPPASARALRRGVE 787 >gi|311746240|ref|ZP_07720025.1| UBA/THIF-type NAD/FAD binding fold protein [Algoriphagus sp. PR1] gi|126576470|gb|EAZ80748.1| UBA/THIF-type NAD/FAD binding fold protein [Algoriphagus sp. PR1] Length=755 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 93/366 (26%), Positives = 157/366 (43%), Gaps = 41/366 (11%) Query 13 LDPAEFLSLVEAAALAPSADNRREVQ-----LEHAGRRVRLWGDQT-WRSAPEHRRIMSL 66 L E LV A LAPS N +Q + G + L+ D+ S +++ SL Sbjct 396 LSENELQELVSMANLAPSGGN---IQPWVWVFDRKGI-LHLFHDKVRSHSMLDYKGTGSL 451 Query 67 VAIGAAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEI-----DVDRLPQTRVDPIEGAI 121 +A GAA+EN++L AGRLG E +V +A I D L + +EG + Sbjct 452 IAFGAAIENLRLCAGRLGIEIEVIHQIQEFGDDCIASIRFVSKDSGALDVKFKELVEG-V 510 Query 122 ERRRTNRR--VRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETE 179 R TNR+ R++ +S+ EL +L E + +G+ L W + Q+ ++V + Sbjct 511 SLRCTNRKNPKRYK---ISKEELDSL-LEVSEEEGVSLEWTEQENDLDQLAKVVGGMDRL 566 Query 180 RFRSRELHEELFSAVRFDIGWTA----SSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLL 235 RF H++ ++ WT + DG+ +LE+ + LR R ++ Sbjct 567 RF----FHDQGLVDFVNEVRWTEEEAFKTKDGIDIATLELSGTEKAAMGLLRDPRTIKFF 622 Query 236 RTVGMHHALGLRAAYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQP 295 R M + L + + LA + + T L AGAV +RIW++ ++G +QP Sbjct 623 RKYLMGYGLT-KISKDTINLATGIFLIKTKKYDPVSILKAGAVLQRIWIKANMMGLSVQP 681 Query 296 FAASA-----VLSLPACEWVAPHVRA--ALVGGWNLL---APGHWPMMVFRIGHARAPSV 345 +A +L + A + L +N + + +FR+ A PS+ Sbjct 682 VSAMLFIFHRILGEKDHGYTAVEEKEIRELKESFNRIFNKNNDQQEIFMFRVNKAGEPSM 741 Query 346 RTMRQS 351 R R+ Sbjct 742 RAYRRD 747 >gi|46562213|ref|YP_009074.1| hypothetical protein DVUA0034 [Desulfovibrio vulgaris str. Hildenborough] gi|46447750|gb|AAS94416.1| conserved domain protein [Desulfovibrio vulgaris str. Hildenborough] gi|311235413|gb|ADP88266.1| UBA/THIF-type NAD/FAD binding protein [Desulfovibrio vulgaris RCH1] Length=989 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 80/304 (27%), Positives = 125/304 (42%), Gaps = 26/304 (8%) Query 15 PAEFLSLVEAAAL-APSADNRREVQLEHAGRRVRLWGD-QTWRSAPEHRRIMSLVAIGAA 72 P E L V AA+ APS DN + + + + D Q S ++R + SL+A GAA Sbjct 612 PLETLHYVARAAMQAPSGDNVQPWRFVPHATGLHIHLDRQADGSFFDYRHVASLLACGAA 671 Query 73 VENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEGAIERRRTNRRVRF 132 V+N +G G + + FPD+ P VA + L + + A+ RR TNRR+ + Sbjct 672 VQNAVYASGSAGLDATLSLFPDATKPDRVASLHCTPLGVPSHEIMTAALWRRHTNRRM-Y 730 Query 133 RGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSRELHEELFS 192 PL + + L W RK + R V LA+ R R++HE L Sbjct 731 AARPLPVEVCERIEHLVSEEQDATLLWATDAAQRKTLARAVYLADRVRVERRDMHEHLMR 790 Query 193 AVRFD--------IGWTASS--------------DDGLPPGSLEVEAWMRPMFRGLRHWR 230 +RFD +G + DGLP +LE R +R WR Sbjct 791 FIRFDGQAEQQGEVGQQGHTGQAGHHSHAGNGPYGDGLPLANLEAGLAGELYLRAVRPWR 850 Query 231 VLRLLRTVGMHHALGLRAAYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLG 290 + + +G+ + L A R + +G L + + + AG ++R W +G Sbjct 851 NMSIANALGLGRLMPLHGAMGVLR-SGGIGLLLANGETETDIARAGMAWQRAWCALEHMG 909 Query 291 AELQ 294 +Q Sbjct 910 YAMQ 913 >gi|120586929|ref|YP_961274.1| hypothetical protein Dvul_3075 [Desulfovibrio vulgaris subsp. vulgaris DP4] gi|120564343|gb|ABM30086.1| UBA/THIF-type NAD/FAD binding protein [Desulfovibrio vulgaris DP4] Length=989 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 79/304 (26%), Positives = 122/304 (41%), Gaps = 26/304 (8%) Query 15 PAEFLSLVEAAAL-APSADNRREVQLEHAGRRVRLWGD-QTWRSAPEHRRIMSLVAIGAA 72 P E L V AA+ APS DN + + + + D Q S ++R + SL+A GAA Sbjct 612 PLETLHYVARAAMQAPSGDNVQPWRFVPHATGLHIHLDRQADGSFFDYRHVASLLACGAA 671 Query 73 VENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEGAIERRRTNRRVRF 132 V+N +G G + + FPD+ P VA + L + + A+ RR TNRR+ + Sbjct 672 VQNAVYASGSAGLDATLSLFPDATKPDRVASLHCTPLGVPSHEIMTAALWRRHTNRRM-Y 730 Query 133 RGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSRELHEELFS 192 PL + + L W RK + R V LA+ R R++HE L Sbjct 731 AARPLPVEVCERIEHLVSEEQDATLLWATDAAQRKTLARAVYLADRVRVERRDMHEHLMR 790 Query 193 AVRFDI----------------------GWTASSDDGLPPGSLEVEAWMRPMFRGLRHWR 230 +RFD DGLP +LE R +R WR Sbjct 791 FIRFDGQAGQQGEVGQQGHTGQAGHHSHAGNGPYGDGLPLANLEAGLAGELYLRAVRPWR 850 Query 231 VLRLLRTVGMHHALGLRAAYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLG 290 + + +G+ + L A R + +G L + + + AG ++R W +G Sbjct 851 NMSIANALGLGRLMPLHGAMGVLR-SGGIGLLLANGETETDIARAGMAWQRAWCALEHMG 909 Query 291 AELQ 294 +Q Sbjct 910 YAMQ 913 >gi|342906343|gb|ABB37623.2| UBA/THIF-type NAD/FAD binding protein [Desulfovibrio alaskensis G20] Length=965 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/271 (26%), Positives = 115/271 (43%), Gaps = 6/271 (2%) Query 21 LVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWRSAPEH-RRIMSLVAIGAAVENVKLR 79 +V A APS DN + + RR+ L+ D+ ++ + + +L++ GA +EN++ Sbjct 623 IVRAGVQAPSGDNSQPWRFRIGDRRIELFADRERDTSFFNVAQAATLISCGAVLENMRYA 682 Query 80 AGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEGAIERRRTNRRVRFRGPPLSQ 139 AG G ET++ PD V + + + + E ++ RR T R+ F+ P+ Q Sbjct 683 AGAAGLETELTLLPDGEGADRVGVAEFEPVGMPLYELAESSMWRRCTT-RLMFKKKPVPQ 741 Query 140 GELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSRELHEELFSAVRFDIG 199 L G L W K + V A+ R R+LHE L +RF Sbjct 742 AVWQRLDRMVAG--EAMLSWVTDRGLMKGLAAAVYKADRARVERRDLHEYLMEHIRFG-P 798 Query 200 WTASSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGMHHALGLRAAYLPCRLAPHV 259 DGLP +L+ + + WRV+RLL +G + L + + Sbjct 799 HEGPHGDGLPLKNLQAGVAGELFMKFTQPWRVMRLLNILGAGRMVPLHGRQ-SVIASGGL 857 Query 260 GALTTSLDLASGALTAGAVFERIWLRTTLLG 290 G ++ + L AGAVF R+W +G Sbjct 858 GMISIAAATEEQYLRAGAVFNRLWCALEYMG 888 >gi|78355869|ref|YP_387318.1| hypothetical protein Dde_0822 [Desulfovibrio alaskensis G20] Length=1006 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/271 (26%), Positives = 115/271 (43%), Gaps = 6/271 (2%) Query 21 LVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWRSAPEH-RRIMSLVAIGAAVENVKLR 79 +V A APS DN + + RR+ L+ D+ ++ + + +L++ GA +EN++ Sbjct 664 IVRAGVQAPSGDNSQPWRFRIGDRRIELFADRERDTSFFNVAQAATLISCGAVLENMRYA 723 Query 80 AGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEGAIERRRTNRRVRFRGPPLSQ 139 AG G ET++ PD V + + + + E ++ RR T R+ F+ P+ Q Sbjct 724 AGAAGLETELTLLPDGEGADRVGVAEFEPVGMPLYELAESSMWRRCTT-RLMFKKKPVPQ 782 Query 140 GELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSRELHEELFSAVRFDIG 199 L G L W K + V A+ R R+LHE L +RF Sbjct 783 AVWQRLDRMVAG--EAMLSWVTDRGLMKGLAAAVYKADRARVERRDLHEYLMEHIRFG-P 839 Query 200 WTASSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGMHHALGLRAAYLPCRLAPHV 259 DGLP +L+ + + WRV+RLL +G + L + + Sbjct 840 HEGPHGDGLPLKNLQAGVAGELFMKFTQPWRVMRLLNILGAGRMVPLHGRQ-SVIASGGL 898 Query 260 GALTTSLDLASGALTAGAVFERIWLRTTLLG 290 G ++ + L AGAVF R+W +G Sbjct 899 GMISIAAATEEQYLRAGAVFNRLWCALEYMG 929 >gi|149277960|ref|ZP_01884099.1| hypothetical protein PBAL39_24760 [Pedobacter sp. BAL39] gi|149231158|gb|EDM36538.1| hypothetical protein PBAL39_24760 [Pedobacter sp. BAL39] Length=763 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 87/368 (24%), Positives = 142/368 (39%), Gaps = 35/368 (9%) Query 9 GMTGLDPAEFLSLVEAAALAPSADNRR---------EVQLEHAGRRVRLWGDQTWRSAPE 59 G L A+ LV AA LAPSA N + ++ L H + WGD Sbjct 402 GSIVLTEAQTNQLVTAAILAPSAGNNQPWKWVAGKGQLFLFHDEKHSVSWGD-------- 453 Query 60 HRRIMSLVAIGAAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEG 119 I S +A G A+EN+K+ A +LG + FP++ N LVA + + Sbjct 454 FDNITSNIAFGTAIENLKIEASKLGLQPAYQLFPNADNKRLVAHFSFSEDKTPYLPELAP 513 Query 120 AIERRRTNRRVRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETE 179 I R TNR+ L + L+ + L QI +V E Sbjct 514 GIGLRLTNRKKGTAKLKLDEKAAAQLTDIVSFDSEATLELIQDDHQIDQIANIVAGVERV 573 Query 180 RFRSRELHEELFSAVRFDIGWT----ASSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLL 235 RF + H + +S +I WT S+ DGL S+E+ + + V++LL Sbjct 574 RFLYPQGHHDFYSK---EIRWTDDSVNSTKDGLDVRSMELSESDKTGLFVASNPEVIKLL 630 Query 236 RTVGMHHALGLRAAYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQP 295 G A + + + +G ++ A + G +R W+ + G + P Sbjct 631 NKWGKGTAFE-KLSRTAIESSSAIGLISMPEYNAENFIKGGEAVQRAWINANMNGLSVHP 689 Query 296 FAAS----AVLSLPACEWVAPHVRAALVGGWNLLAP------GHWPMMVFRIGHARAPSV 345 +A A L+ E + ++ L L + + +FR+ HA SV Sbjct 690 ISAPLFLFARLNHGNGEGLTERMKEELTKYQRELLQIFPSLAQNQGIFMFRLSHADDASV 749 Query 346 RTMRQSVE 353 R++R+ +E Sbjct 750 RSVRKPLE 757 >gi|337286795|ref|YP_004626268.1| nitroreductase [Thermodesulfatator indicus DSM 15286] gi|335359623|gb|AEH45304.1| nitroreductase [Thermodesulfatator indicus DSM 15286] Length=359 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 88/364 (25%), Positives = 150/364 (42%), Gaps = 33/364 (9%) Query 13 LDPAEFLSLVEAAALAPSADNRR--EVQLEHAGRRVRLWGDQTWRSAPEHRRIMSLVAIG 70 LDP + +L++AA APS DN + ++++ L+ + +S + + S+ A+G Sbjct 7 LDP-KLKTLLKAAVAAPSGDNLQPWRFRIKNEKEIDFLFDPRVDQSFFNYEQNASIFAVG 65 Query 71 AAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEGAIE-------- 122 AA EN R + K F S L+ ++ ++D +G E Sbjct 66 AAFENASYLLSRENIKHKFI-FDFSKENSLI------KIGTLKIDWPDGEFEFKTPLAKT 118 Query 123 ---RRRTNRRVRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETE 179 +R TNR+ + LS E+ ++ + +++ E K I +V A+ Sbjct 119 PIMKRHTNRKF-YEKVNLSDKEMAEITKLVADL-PVKVKVLRGKEL-KAIADIVYFADLI 175 Query 180 RFRSRELHEELFSAVRFDIGWTASSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVG 239 R ++LHE L +R+ +S DG+P +LE R R W V++ +G Sbjct 176 RVERKDLHEFLHDTIRWTEEEILTSRDGMPVATLEAGKAGENFLRFTRPWPVMKTFLRLG 235 Query 240 MHHALGLRAAYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAAS 299 + + A L + V A T AG ER+WL T G +QP AA+ Sbjct 236 VSRHMADYARKLVLS-SEGVFAFFTDELGPRAYFEAGRTAERLWLALTEKGLAVQPMAAA 294 Query 300 AVLSL-----PACEWVAPH--VRAALVGGWNLLAPGHWPMMVFRIGHARAPSVRTMRQSV 352 + + ++ A H + G+ L P+M+ R G A PS +R+ V Sbjct 295 PLFMIRWRRGRYLDFSARHQFFMRKIERGFEKLGIDK-PLMLLRFGKAPLPSATALRKEV 353 Query 353 EAYC 356 E + Sbjct 354 EDFL 357 >gi|298675136|ref|YP_003726886.1| hypothetical protein Metev_1217 [Methanohalobium evestigatum Z-7303] gi|298288124|gb|ADI74090.1| conserved hypothetical protein [Methanohalobium evestigatum Z-7303] Length=320 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 79/345 (23%), Positives = 149/345 (44%), Gaps = 39/345 (11%) Query 21 LVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWR---SAPEHRRIMSLVAIGAAVENVK 77 ++ A LAPS N + + +++++ D + R P+ R + +++G A+EN+ Sbjct 7 IIRYATLAPSGHNTQPWKFYLEKNQIKIFPDYSRRLPAVDPDDREL--FISLGCALENLL 64 Query 78 LRAGRLGFETKVCW-FPDSGNPGLVAEIDVDRLPQTRVDPIEGAIERRRTNRRVRFRGPP 136 + A G+ T V + F +G + +D D + + D + AI +R+T R ++ G Sbjct 65 IVAEHNGYSTNVEYSFDGNGEDFISVVLDTDGIKEN--DILYDAIPQRQTTRS-KYDGNS 121 Query 137 LSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSRELHEELFSAVRF 196 + +L L + DGI + + + I+ LVR+ + +EL S +RF Sbjct 122 IPDDDLDKLKSVIME-DGISSLFITDDDKIEAIIDLVRMGNKIQMNDENFKKELTSWIRF 180 Query 197 DIGWTASSDDGLPP---GSLEVEAWMRPMFRGLRHWRVLRLLRTVGMHHALGLRAAYLPC 253 + T DGL GS + +W F ++ + A + + Sbjct 181 NDSDTKKHLDGLSSKTMGSPSIPSWFGRFF-----------IKYIATDKAQS-KKDEINI 228 Query 254 RLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASAVLSLPACEWVAPH 313 R + + + + + + G FER+ L T L + +A L+ P CE P Sbjct 229 RSSSSLLVIMSDDNSKIAWVDIGRSFERLVLNATALNIK------NAHLNQP-CE--IPQ 279 Query 314 VRAALVGGWNLLAPGH-WPMMVFRIGHARAPSVRTMRQSVEAYCY 357 ++ L +L+ G+ P ++ RIG+ + P R+ R+ VE Y Sbjct 280 LKEKL---QEILSIGNKHPQLLLRIGYGQ-PLPRSQRRHVEDVVY 320 >gi|238020247|ref|ZP_04600673.1| hypothetical protein GCWU000324_00122 [Kingella oralis ATCC 51147] gi|237868641|gb|EEP69645.1| hypothetical protein GCWU000324_00122 [Kingella oralis ATCC 51147] Length=383 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 86/341 (26%), Positives = 141/341 (42%), Gaps = 47/341 (13%) Query 15 PAEFLSLVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWRSA---PEHRRIMSLVAIGA 71 P +F +L+EAA APS N + Q R+ + D + R + P++R + +++G Sbjct 58 PTDFHALIEAAVRAPSGHNSQPWQFALGDDRITIDPDFSRRLSAVDPDNREL--FISLGC 115 Query 72 AVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEGAIERRRTNRRVR 131 A+EN+ L A G+ + D G + + Q + + I RR+TN R Sbjct 116 ALENLCLAAAHSGYAAQE-HLADDGTVHIALHQQPEPTKQPENEALYAQIPRRQTN-RAT 173 Query 132 FRGPPLSQGELGALSAEATGIDGIQLHWF--DSPETRKQILRLVRLAETERFRSRELHEE 189 + G P+ Q +L + A A D + LH F +PE + + V + + E Sbjct 174 YNGSPIPQAQLDPILA-AQQSDTVSLHAFAPSAPEF-ATLTQAVIAGNSAQMNDPAFKAE 231 Query 190 LFSAVRFDIGWTASSDDGLPP---GSLEVEAWM-RPMFRGL----RHWRVLRLLRTVGMH 241 L S +RF+ + ++ DGL G+ + AW+ RP+ R + RH R R H Sbjct 232 LLSWIRFNQNHSNATRDGLSYAVMGAPNLPAWISRPIIRAMLNAKRHNRSDRAKIASSSH 291 Query 242 HALGLRAAYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASAV 301 L + ++ D + LT G +R L T G A A Sbjct 292 LLL-----------------IASTEDNPATWLTTGRTLQRTLLALTQHG------IAHAY 328 Query 302 LSLPACEWVAPHVRAALVGGWNLLAPGHWPMMVFRIGHARA 342 L+ P CE A + A + P ++ R+G+A A Sbjct 329 LNQP-CEVPAQRTQLAQLPALG----SKQPQILLRLGYAAA 364 >gi|213963052|ref|ZP_03391311.1| conserved hypothetical protein [Capnocytophaga sputigena Capno] gi|213954393|gb|EEB65716.1| conserved hypothetical protein [Capnocytophaga sputigena Capno] Length=337 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 84/345 (25%), Positives = 148/345 (43%), Gaps = 44/345 (12%) Query 17 EFLSLVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWRSAP----EHRRIMSLVAIGAA 72 +FL+L++AA APS N + E + + + + ++ P +HR + +++G A Sbjct 25 DFLTLIKAATQAPSGHNSQPWWFETSDHSIVIKPN-FEKALPAVDGQHREL--FISLGCA 81 Query 73 VENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEGAIERRRTNRRVRF 132 +EN+ ++A L ++T V P+ V ID+ + DP+ IE+R+TNR V + Sbjct 82 LENLCIKASELQYQTNVTLTPEG-----VITIDLQKSEAVAPDPLASVIEKRQTNRSV-Y 135 Query 133 RGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSRELHEELFS 192 + L +L A+ TG GI + + K++ V T + EL Sbjct 136 DNKHIDPALLQSLVAQ-TGATGI-FTFANGTPLFKKLTDAVLQGNTAQMSDPAFKNELLL 193 Query 193 AVRFDIGWTASSDDGLPPGSL---EVEAWM-RPMFRGLRHWRVLRLLRTVGMHHALGLRA 248 +RF+ + S+ DGL L + W+ P+ +G + + L+ Sbjct 194 WIRFNKKHSESTHDGLSYAVLGAPNLPRWVTEPIVKGSLKAKT---------QNKTDLKK 244 Query 249 AYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASAVLSLPACE 308 + + + +TT + + G ER L T G A A L+ P CE Sbjct 245 ----IQSSSDMVLITTVTNDIPTWIATGRTLERFLLLLTQAG------IAHAYLNQP-CE 293 Query 309 WVAPHVRAALVGGWNLLAPGHWPMMVFRIGHARAPSVRTMRQSVE 353 P V A+L L +P ++ RIG+A+ P + R+ V+ Sbjct 294 --VPEVNASL--REKLTENNVYPQILLRIGYAK-PVAYSKRKDVK 333 >gi|325106053|ref|YP_004275707.1| UBA/THIF-type NAD/FAD binding protein [Pedobacter saltans DSM 12145] gi|324974901|gb|ADY53885.1| UBA/THIF-type NAD/FAD binding protein [Pedobacter saltans DSM 12145] Length=759 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 67/294 (23%), Positives = 122/294 (42%), Gaps = 14/294 (4%) Query 13 LDPAEFLSLVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWRSAP--EHRRIMSLVAIG 70 +D + LVE A LAPS N + + + + L+ D+ +RS +++ I SL+ G Sbjct 403 VDDSLINKLVEDACLAPSTGNDQPWKWLYKNSVLFLFHDE-YRSFSFGDYQNIASLLTFG 461 Query 71 AAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTR--VDPIEGAIERRRTNR 128 AA EN+++ A + G + P + + L+A I + + +D + AI RR TNR Sbjct 462 AAYENLRISALKNGLTCSYDFRPIANDRRLIAAIKFGKSNKEELGIDGLYSAISRRCTNR 521 Query 129 RVRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSRELHE 188 + P L + L+ A I + WF E ++ R++ + R + E H Sbjct 522 NLSI-PPVLPESVYRQLTESAQSIPSATIKWFKKEEELNELARIIGACDRIRLLNAEGH- 579 Query 189 ELFSAVRFDIGWT----ASSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGMHHAL 244 + V ++ WT S DG+ +L + ++ ++ + + L Sbjct 580 --YDFVHHEMRWTPEEAESRKDGIDVQTLGLSNSQLAALGIIKSTETIKEINYIDGGKGL 637 Query 245 GLRAAYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAA 298 + A + A + +T G E+ WL+ T LG + P + Sbjct 638 EMIAKK-SVKAASAIALITLPQYTPENFFEGGRSLEQFWLKATTLGLAVHPLIS 690 >gi|110639176|ref|YP_679385.1| hypothetical protein CHU_2794 [Cytophaga hutchinsonii ATCC 33406] gi|110281857|gb|ABG60043.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406] Length=770 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 87/363 (24%), Positives = 140/363 (39%), Gaps = 29/363 (7%) Query 13 LDPAEFLSLVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWR-SAPEHRRIMSLVAIGA 71 L L+ AA LAPS N + + + + L+ D++ S ++ + S V +GA Sbjct 410 LSEGTLFELINAANLAPSVGNNQPWKWFYKEGSLLLFHDKSITISFGDYDEVGSNVTMGA 469 Query 72 AVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDR-LPQTR--VDPIEGAIERRRTNR 128 +EN+ L+A LG FP P LVA LP + D + IE+R TNR Sbjct 470 CIENLILKAHHLGLNVTKNIFPLPEKPLLVAVFSFSEILPAQKQPTDYLVNYIEKRCTNR 529 Query 129 RVRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSRELHE 188 R + + ++ +L A I G LH +S + I ++ + RF E H Sbjct 530 NNGKR-ISVDKSDIDSLKNIAQSIPGAVLHIIESDADLEAIKNVIAACDRLRFMHPEGHH 588 Query 189 ELFSAVRFDIGWTA----SSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTV---GMH 241 + F+ +I WT + DGL + ++ F+ V++ L T+ G Sbjct 589 DFFTK---EIRWTKEDCEKTRDGLDIAAFDLTPSEVAGFKMASDPDVIKYL-TIWEGGKA 644 Query 242 HALGLRAAYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASAV 301 R A A + LT L G +RIWL T +QP A Sbjct 645 FEKMTRKA---VDSAAAIAFLTMPTYNNVNYLLGGQCVQRIWLEATKRNLSIQPMLAPLF 701 Query 302 LSLPACEWVAPHVRAALVGGWNLL----------APGHWPMMVFRIGHARAPSVRTMRQS 351 L ++ A + L + +F+I + VR++R+ Sbjct 702 LFTRLIHGNGENIPAKMSDELKELRKKFLTIFPIKENMGEIFLFKISLSSELQVRSLRKP 761 Query 352 VEA 354 VE+ Sbjct 762 VES 764 >gi|313204891|ref|YP_004043548.1| nitroreductase [Paludibacter propionicigenes WB4] gi|312444207|gb|ADQ80563.1| nitroreductase [Paludibacter propionicigenes WB4] Length=363 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 68/299 (23%), Positives = 133/299 (45%), Gaps = 29/299 (9%) Query 9 GMTGLDPA---EFLSLVEAAALAPSADNRREVQLE-HAGRRVRLWGDQTWRSA---PEHR 61 G L+P + ++ A+LA S+ N + ++E + +RL+ D T A P+HR Sbjct 27 GQRSLEPNGKNDVYQMLYFASLAGSSHNSQPWRVEVYNNSIIRLYADITRALAVVDPDHR 86 Query 62 RIMSLVAIGAAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEGAI 121 + +++GA +EN+ L AG LG++ K+ + VAEI +++ T P + Sbjct 87 EL--FISLGAFIENLTLSAGSLGYDCKLILADNYSKAKPVAEIVLNKASAT---PYNLKL 141 Query 122 ERRRTNRRVRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETR-KQILRLVRLAETER 180 R R F + + ++ L T D ++H+F++ + K I + A T++ Sbjct 142 IETRMTLRTPFDTNAIKENDVRRL----TKPDAERIHFFEASDGEGKFIAQQTIEAYTQQ 197 Query 181 FRSRELHEELFSAVRFDIGWTASSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGM 240 ++ +EL + +RF + DGL +++ G+ + V ++ Sbjct 198 AYNKAAQDELANWLRFSNKEVDAKRDGLTTAGMQIT--------GISGFFVRHFMKPQDS 249 Query 241 HHALGLRAAYLPC-RLAPHVG---ALTTSLDLASGALTAGAVFERIWLRTTLLGAELQP 295 ++A + A G +T+S + +G + G ++++I L T LG QP Sbjct 250 KKESFIKAGIDKTKKQALSCGGWIVITSSGNTVAGWINTGRLYQQIHLTCTELGLGFQP 308 >gi|254416948|ref|ZP_05030696.1| hypothetical protein MC7420_3443 [Microcoleus chthonoplastes PCC 7420] gi|196176312|gb|EDX71328.1| hypothetical protein MC7420_3443 [Microcoleus chthonoplastes PCC 7420] Length=320 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 51/197 (26%), Positives = 87/197 (45%), Gaps = 10/197 (5%) Query 21 LVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWR---SAPEHRRIMSLVAIGAAVENVK 77 L+ A LAPS N + + +R++ D + R P+ + +++G A+EN+ Sbjct 10 LIRLATLAPSGHNTQPWKFSIDTNTIRIYPDYSRRLPIVDPDDHAL--FISLGCALENLL 67 Query 78 LRAGRLGFETKVCWFPD-SGNPGLVAEIDVDRLPQTRVDPIEGAIERRRTNRRVRFRGPP 136 + A GF +V +FPD L+ + + P + I +R++ R + Sbjct 68 IAAQHSGFNGEVEYFPDGEAQDCLLVHLHPNSHPPDTA--LFHTISKRQSTR-CAYDSRE 124 Query 137 LSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSRELHEELFSAVRF 196 + + +L AL +A DGIQL F + +QI V+ +F EL S +RF Sbjct 125 IPRTDLQALE-KANTQDGIQLRVFTEADDIEQITDFVKQGNRHQFNDPAFVNELLSWIRF 183 Query 197 DIGWTASSDDGLPPGSL 213 + S DGL +L Sbjct 184 NQREITSHQDGLIAAAL 200 >gi|311693763|gb|ADP96636.1| nitroreductase-like protein [Marinobacter adhaerens HP15] Length=342 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 82/332 (25%), Positives = 141/332 (43%), Gaps = 54/332 (16%) Query 20 SLVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWR---SAPEHRRIMSLVAIGAAVENV 76 +++E+A LAPS+ N + + E + L+ D+ + P+ R + ++ G A+ N+ Sbjct 17 AILESATLAPSSHNTQPWRFELGQTGISLFADRLRALPVNDPDDRELT--ISCGCALFNL 74 Query 77 KLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLP--QTRVDPIEGAIERRRTNRRVRFRG 134 ++ A GF T+ PD G+ L+A + + + R + AI RRRT R+ RF Sbjct 75 RIAAAHAGFNTECQLLPDPGDEDLLATVSFSPVSGEEGRQTELFLAIARRRTYRK-RFEP 133 Query 135 PPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSRELHEELFSAV 194 + LG L E+ +G +S R Q+ LV + ++ + Sbjct 134 KQVPSEVLGILE-ESAETEGAWFQVLESEHARHQVADLVAEGDAAQWSN----------- 181 Query 195 RFDIGWTASSDDGLPPGSLEVEAWMRPMFR-------GLRHWRVLRLLRTVGMHHALGLR 247 P E+ AWM P + G+ ++RT M + +G + Sbjct 182 --------------PSWRRELAAWMHPRRKGDGLTVPGMVAPVAQLVVRTFDMGNGVGAK 227 Query 248 AAYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASAVLSLPAC 307 L +P + AL T+ D L AG ER+ LR+ LG LQ ++ L+ P Sbjct 228 DRQL-ADESPVIAALGTAGDGVEDWLKAGQALERVLLRS--LGQGLQ----ASYLNQPIQ 280 Query 308 EWVAPHVRAALVGGWNLLAPGHWPMMVFRIGH 339 V +R L +LL +P ++ R+G+ Sbjct 281 VAV---LRPKL---QHLLGRSGFPQILLRLGY 306 >gi|298368905|ref|ZP_06980223.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] gi|298282908|gb|EFI24395.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] Length=321 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 81/337 (25%), Positives = 140/337 (42%), Gaps = 43/337 (12%) Query 13 LDPAEFLSLVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWRSAPE---HRRIMSLVAI 69 ++ + SLV AA APS N + + + D + R P +RR + +++ Sbjct 1 MNSDQLRSLVSAATRAPSGHNTQPWHFTAKDDEIVISPDYS-RELPAVDGNRREL-FISL 58 Query 70 GAAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEGAIERRRTNRR 129 G A EN+ L+A LG+ T+ D+ L A QT DP+ I + +TNR Sbjct 59 GCAAENLCLQASVLGYATETLLDGDNIRLRLQAS------EQTAADPLAAYINQCQTNRS 112 Query 130 VRFRGPPLSQGELGALSAEATGIDGIQLHWFD-SPETRKQILRLVRLAETERFRSRELHE 188 + + G + +G L + + + DGI++H F ET + + V + Sbjct 113 M-YNGSLIPEGSLQTIPLQPSA-DGIKIHLFGRQSETFRLLTEAVIQGNAAQMADPAFKT 170 Query 189 ELFSAVRFDIGWTASSDDGLPPGSL---EVEAWMRPMFRGLRHWRVLRLLRTVGMHHALG 245 EL S +RF+ S+DG+ +L + W+ +++L+ + Sbjct 171 ELLSWIRFNKKHAEHSNDGVSYAALGAPNLPRWLSE--------PIVKLMLNADTQN--- 219 Query 246 LRAAYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASAVLSLP 305 +A ++ H+ +T+ D + + G +R LR T G A A L+ P Sbjct 220 -KADRKKIAVSSHLALITSPADHIADWVATGRSLQRFLLRLTQQG------IAHAYLNQP 272 Query 306 ACEWVAPHVRAALVGGWNLLAP--GHWPMMVFRIGHA 340 CE +R L L P G P ++ R+G+A Sbjct 273 -CEVST--LRQQLQSE---LFPNGGEQPQLLLRLGYA 303 >gi|255036151|ref|YP_003086772.1| hypothetical protein Dfer_2389 [Dyadobacter fermentans DSM 18053] gi|254948907|gb|ACT93607.1| UBA/THIF-type NAD/FAD binding protein [Dyadobacter fermentans DSM 18053] Length=762 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 68/291 (24%), Positives = 119/291 (41%), Gaps = 18/291 (6%) Query 20 SLVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWRSAP--EHRRIMSLVAIGAAVENVK 77 +V+AA APS N + + + R+ L+ D+ +RS + +I S ++ GA+ EN+ Sbjct 405 DIVKAACQAPSTGNDQPWKWLYRHGRLFLFHDR-FRSFSFGDFDQIASNISFGASYENIL 463 Query 78 LRAGRLGFETKVCWFPDSGNPGLVAEIDVDRL-PQTRVDPIEG-----AIERRRTNRRVR 131 L++ G + FP L+A ID R + DP+ I R TNR Sbjct 464 LKSREAGLDVAAETFPLGEESTLIAVIDFHRAGTAAKADPVYAPEAVQVIYERTTNRNPS 523 Query 132 FRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSRELHEELF 191 P+S+ L A +DG H+F ++ I ++ + R + + H + Sbjct 524 -TAVPISEAIFQQLKEAAESVDGAAFHYFADRKSINAIGEIIGECDRVRLLNPDGH---Y 579 Query 192 SAVRFDIGWTAS----SDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGMHHALGLR 247 V ++ WT + S DG+ +L + +R + + L+ + AL + Sbjct 580 DFVHREMKWTPTDAEQSRDGIDVRTLGLSNAQIAALSIIRDREISQTLKGIQGGGAL-VD 638 Query 248 AAYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAA 298 AA A +G +T G +R+WLR L + P + Sbjct 639 AALKSVETASALGMITMPRYSYEDFFRGGMAMQRLWLRAEQLQFAIHPLIS 689 >gi|228471792|ref|ZP_04056565.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC 33624] gi|228276945|gb|EEK15640.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC 33624] Length=343 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 81/352 (24%), Positives = 147/352 (42%), Gaps = 48/352 (13%) Query 16 AEFLSLVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWRSAP----EHRRIMSLVAIGA 71 +++++L++AA APSA N + E + + ++ P +HR + +++G Sbjct 20 SDYMTLIKAATQAPSAHNSQPWWFETFDHSIVI-SPNFEKALPAVDSQHREL--FISLGC 76 Query 72 AVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEGAIERRRTNR--- 128 A+EN+ +A L ++T+V + G V +++ + DP+ IE+R+TNR Sbjct 77 ALENLCTKASELHYQTQVS-LSEEG----VITVELHKSNTVVPDPLAAFIEKRQTNRSEY 131 Query 129 RVRFRGPPLSQGELGALSAEATGIDGI-QLHWF--DSPETRKQILRLVRLAETERFRSRE 185 + R P L Q + + + +G H F D+P ++ + V T + Sbjct 132 QDRRIDPALLQSLIDKVYEGLSPFEGAGMFHVFAKDTP-LFERFTQAVLQGNTVQMSDPA 190 Query 186 LHEELFSAVRFDIGWTASSDDGLPPGSL---EVEAWM-RPMFRGLRHWRVLRLLRTVGMH 241 EL S +RF+ + S+ DGL L + W+ P+ RG + Sbjct 191 FKNELLSWIRFNKKHSESTHDGLSYAVLGAPNLPRWVTEPIVRG-------------SLK 237 Query 242 HALGLRAAYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASAV 301 + + + H+ LTT + + G ER L T G A A Sbjct 238 AKTQNKTDLKKIQSSSHMVLLTTEGNDIRTWIQTGRTLERFLLLLTQAG------IAHAY 291 Query 302 LSLPACEWVAPHVRAALVGGWNLLAPGHWPMMVFRIGHARAPSVRTMRQSVE 353 L+ P CE P + L N +P ++ RIG+A+ P + R+ ++ Sbjct 292 LNQP-CE--VPEINLTL--RENFPKENLYPQILLRIGYAK-PVAYSKRKDIK 337 >gi|254425513|ref|ZP_05039230.1| hypothetical protein S7335_79 [Synechococcus sp. PCC 7335] gi|196187936|gb|EDX82901.1| hypothetical protein S7335_79 [Synechococcus sp. PCC 7335] Length=323 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/216 (27%), Positives = 96/216 (45%), Gaps = 17/216 (7%) Query 16 AEFLSLVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWRSA---PEHRRIMSLVAIGAA 72 A+ L+E A LA S+ N + Q + + + D + R P++ + V++G A Sbjct 8 AQLKELIEYATLAASSHNTQCWQFQIKENAIAILPDLSRRCPVVDPDNHHLY--VSLGCA 65 Query 73 VENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQ-TRVDPIEGAIERRRTNRRVR 131 EN+ A G +V F D+G I+++ P + P+ AI R+ R Sbjct 66 TENLVQAADAFGLSGQVT-FDDTG----AGTINIELEPAAVKTSPLFEAIPVRQCTRS-E 119 Query 132 FRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSRELHEELF 191 + G PL + EL L + TG +G+++ PE + I++ V T + + +EL Sbjct 120 YDGQPLREYELRKLESAGTG-NGVRVVMLTEPEEIETIIKYVVQGNTAQMTNSVFLQELK 178 Query 192 SAVRFDIGWTASSDDGLP---PGSLEVEAWM-RPMF 223 S +RF A DGL G + W+ P+F Sbjct 179 SWIRFSDREAAKKGDGLSGKTSGKPSIPRWLGEPLF 214 >gi|330808977|ref|YP_004353439.1| hypothetical protein PSEBR_a2166 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377085|gb|AEA68435.1| Hypothetical protein; putative exported protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length=369 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/201 (29%), Positives = 85/201 (43%), Gaps = 11/201 (5%) Query 15 PAEFLSLVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWRS---APEHRRIMSLVAIGA 71 PA LV A LAPS+ N + + + + + D R P+ + V++G Sbjct 53 PAVLRELVRYATLAPSSHNTQCWKFGLDDQSISILPDYQRRCPIVDPDDHHL--FVSLGC 110 Query 72 AVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEGAIERRRTNRRVR 131 A EN+ A +GF F N I ++R Q R P+ AI RR++ R Sbjct 111 AAENLVQAAAAMGFRGDAV-FNTGKNESW--NISLERAAQVRT-PLFEAIPRRQSTR-AE 165 Query 132 FRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSRELHEELF 191 F PLS EL L +G +G+++ + + +L V T + R EL Sbjct 166 FDAKPLSNDELRLLEIAGSG-NGVRVQLLTDKQDMENVLDFVVQGNTAQMRDPAFVRELK 224 Query 192 SAVRFDIGWTASSDDGLPPGS 212 +RF+ G A DGL GS Sbjct 225 EWLRFNGGQAARQGDGLFTGS 245 >gi|344339230|ref|ZP_08770160.1| hypothetical protein ThimaDRAFT_1898 [Thiocapsa marina 5811] gi|343801150|gb|EGV19094.1| hypothetical protein ThimaDRAFT_1898 [Thiocapsa marina 5811] Length=325 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 78/288 (28%), Positives = 121/288 (43%), Gaps = 28/288 (9%) Query 10 MTGLDPAEFLSLVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWRSA---PEHRRIMSL 66 MT A L LV A LAPS+ N + R+ + D+ R P+ + Sbjct 1 MTDRPDARQLELVTHAILAPSSHNTQCWLFRLGPERIEILPDRGRRCPVVDPDDHHL--F 58 Query 67 VAIGAAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEGAIERRRT 126 V++G A EN+ A LG+ +V + D+G G VA + +D P R E R+ T Sbjct 59 VSLGCAAENLLQAAPALGWRGEVRYQGDAG--GSVA-MALDAGPVERSALFEAIATRQST 115 Query 127 NRRVRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSREL 186 R + G PLS EL AL A TG G+++ +++L LV + Sbjct 116 --RCDYDGQPLSNAELRALEAAGTGA-GVRVVLLTERAPMERVLELVVEGNRAQLNDPAF 172 Query 187 HEELFSAVRFDIGWTASSDDGL---PPGSLEVEAWM-RPMFRGLRHWRVLRLLRTVGMHH 242 EL VRF+ ++ DGL G+ + AW+ R +F + + + Sbjct 173 LRELKHWVRFNTRHAKATADGLFAACTGNPSLPAWLGRALFEH---------IVSAKAEN 223 Query 243 ALGLRAAYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLG 290 A +R R + + + +D + AG FER L+ T+LG Sbjct 224 AKAVRQ----VRSSAGLAVFVSEIDEPVHWIEAGRAFERFALQATVLG 267 >gi|189347719|ref|YP_001944248.1| hypothetical protein Clim_2245 [Chlorobium limicola DSM 245] gi|189341866|gb|ACD91269.1| conserved hypothetical protein [Chlorobium limicola DSM 245] Length=377 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 57/214 (27%), Positives = 89/214 (42%), Gaps = 18/214 (8%) Query 21 LVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWRS---APEHRRIMSLVAIGAAVENVK 77 LV A LAPS+ N + + R + ++ D + R P+ + V++G A EN+ Sbjct 67 LVRYATLAPSSHNTQCWKFRIEDRSISIFPDFSRRCPVVDPDDHHL--FVSVGCATENLI 124 Query 78 LRAGRLGFETKVCWFPDS-GNPGLVAEIDVDRLP-QTRVDPIEGAIERRRTNRRVRFRGP 135 A G + P S GN + V P V P+ AI R++ R + G Sbjct 125 QAASANGLYGNAVFDPSSRGN------VRVSLEPANAVVTPLFNAIPERQSTR-AEYDGK 177 Query 136 PLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSRELHEELFSAVR 195 P+S EL L E TG G+++ + + +L V T + EEL + +R Sbjct 178 PISMNELAMLEREGTG-KGVRIIFLTERAAMESLLDYVVQGNTAQMNDSAFIEELKAWIR 236 Query 196 FDIGWTASSDDGL---PPGSLEVEAWMRPMFRGL 226 F DGL G+ V +W+ + GL Sbjct 237 FSESDAVRRGDGLYSASSGNPSVPSWLGSLLFGL 270 >gi|258655342|ref|YP_003204498.1| hypothetical protein Namu_5243 [Nakamurella multipartita DSM 44233] gi|258558567|gb|ACV81509.1| UBA/THIF-type NAD/FAD binding protein [Nakamurella multipartita DSM 44233] Length=730 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 96/359 (27%), Positives = 138/359 (39%), Gaps = 36/359 (10%) Query 20 SLVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWRSAPEHRRIMSLVAIGAAVENVKLR 79 ++V A LAPS N + L G RV + + SA + + S V IGAA N ++ Sbjct 377 AVVHAIRLAPSGGNVQPWSLRVEGDRVDVLLARERTSAMDVQFRGSYVGIGAAQFNAEVA 436 Query 80 AGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDP----IEGAIERRRTNRRVRFRGP 135 A R G V FP LV ID+ P VDP + A+ R TNR R Sbjct 437 AARHGRPACVRQFPQGPGSDLVLSIDLREGP---VDPELARLYPAMLARCTNRGFGRRR- 492 Query 136 PLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFR--SRELHEELFSA 193 P + + +A I G +LH P I + LAE++R R + LH+++ S Sbjct 493 PFDADAVASFQRQAVAI-GSRLHLISDPAGVSAIADI--LAESDRIRYLTPVLHQQMMSE 549 Query 194 VRFDIGWTASSDD--GLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGMHHALGLRAAYL 251 +R W D G+ +L+++ R V+ L ALG Sbjct 550 LR----WPEEVGDNLGIDVSTLDLDTTDLAKLGVARRSDVMDYLARWQGGAALG-DTTRD 604 Query 252 PCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASAVLSLP------ 305 + V LT + D S L G +W R G + P + + + Sbjct 605 RVNASSAVAVLTVAGDTPSDYLRGGRALALLWTRANQCGLAVHPVSPVFLFARDEQDRAG 664 Query 306 -----ACEWVAPHVR-AALVGGWNLLAPGHWPMMVFRIGHARAPSVRTMRQSVEAYCYA 358 E R AA VG L P++V R+ H AP+ R+ R S A A Sbjct 665 LSAEFTDELTDLQARFAATVG----LPAAEAPVLVVRVSHDVAPAARSRRLSDAAVLLA 719 >gi|271966171|ref|YP_003340367.1| hypothetical protein Sros_4801 [Streptosporangium roseum DSM 43021] gi|270509346|gb|ACZ87624.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021] Length=333 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 89/348 (26%), Positives = 139/348 (40%), Gaps = 62/348 (17%) Query 1 MRAGRWGPGMTGLDPAEFLSLVEAAALAPSADNRREVQL-EHAGRRVRLWGDQTWRSAPE 59 ++A W P + P F V+ +A AD+ R+++L + AGR + Sbjct 17 VQAAVWAPSVHNTQPWSFA--VDGEEIALRADSDRKLRLGDAAGREM------------- 61 Query 60 HRRIMSLVAIGAAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRL----PQTRVD 115 L++ GAA+ NV+L LG+E +V PD P L+A + + TR+ Sbjct 62 ------LISCGAALMNVRLTLSALGWEPRVRVLPDPDRPALLATVRMGEAVVADEHTRL- 114 Query 116 PIEGAIERRRTNRRVRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRL 175 + IERRRT+ R F P+ + + AL A+A +G +L S + + L Sbjct 115 -LHAEIERRRTH-RAGFTDLPVPERLIEALVAQAQA-EGARLTPVRSEAAVRVLAALTCA 171 Query 176 AETERFRSRELHEELFSAVRFDIGWT----ASSDDGLPPGSLEVEAWMRPMFRGLRHWRV 231 A+ + + R L E+ I W +S DG+P + + R R H+ Sbjct 172 AQDVQSQDRLLTLEM-------ISWAQPPGSSRGDGVP-----AQGYPREPRRTSPHF-- 217 Query 232 LRLLRTVGMHHALGLRAAYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGA 291 R H G A V LTT D +TAG +R+ L+ + Sbjct 218 --AQRDYAHGHPWGSDADQFFAASTGTVAVLTTPADAREDWITAGQALQRVLLQAS---- 271 Query 292 ELQPFAASAVLSLPACEWVAPHVRAALVGGWNLLAPGHWPMMVFRIGH 339 + A A E V H+R L L G P M+ R+G+ Sbjct 272 ---AYDVHAAFHTQALETV--HLREFL---REELLSGRHPQMIMRLGY 311 >gi|119357281|ref|YP_911925.1| hypothetical protein Cpha266_1474 [Chlorobium phaeobacteroides DSM 266] gi|119354630|gb|ABL65501.1| conserved hypothetical protein [Chlorobium phaeobacteroides DSM 266] Length=377 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 61/230 (27%), Positives = 94/230 (41%), Gaps = 18/230 (7%) Query 5 RWGPGMTGLDPAEFLSLVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWRSA---PEHR 61 R G G A LV A LAPS+ N + + R + ++ D + R P+ Sbjct 51 RHGKVEAGNRSAVLRELVRYATLAPSSHNTQCWKFRIDDRSISIFPDFSRRCPVVDPDDH 110 Query 62 RIMSLVAIGAAVENVKLRAGRLGFETKVCWFPDS-GNPGLVAEIDVDRLPQTRV-DPIEG 119 + V+IG A+EN+ A G + + P S GN + V P V P+ Sbjct 111 HL--FVSIGCAMENLIQAASANGLDGNAVFDPSSRGN------VRVSLEPTNAVVTPLFK 162 Query 120 AIERRRTNRRVRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETE 179 AI R++ R + P+S EL L E TG G+++ + + +L V T Sbjct 163 AIPERQSTR-AEYDRKPISMNELAMLEREGTG-KGVRIIFLTERAAMESLLDYVVQGNTA 220 Query 180 RFRSRELHEELFSAVRFDIGWTASSDDGL---PPGSLEVEAWMRPMFRGL 226 + EEL + +RF DGL G+ V +W+ + GL Sbjct 221 QMNDSAFVEELKAWIRFSESDAVRRGDGLYSASSGNPSVPSWLGSLLFGL 270 >gi|339050901|ref|ZP_08647729.1| hypothetical protein imdm_588 [gamma proteobacterium IMCC2047] gi|330721891|gb|EGG99847.1| hypothetical protein imdm_588 [gamma proteobacterium IMCC2047] Length=355 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 67/294 (23%), Positives = 115/294 (40%), Gaps = 22/294 (7%) Query 72 AVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEGAIERRRTNRRVR 131 A+EN+ G +V FP+ + A+I ++ + ++ R TNR Sbjct 63 ALENILRCCEDAGVGAEVTLFPEGEGSNVYAKISLEGFEAVTNSVLPDSVAARHTNRHPY 122 Query 132 FRG--PPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSRELHEE 189 +G P ++ +E G+ + I + V++A RF+++E+HE Sbjct 123 KKGAVPKRLADKVENFGSEV----GVNVKVVSRKADIALIAKQVQVASEIRFQTQEVHEW 178 Query 190 LFSAVRFDIGWTASSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGMHHALGLRAA 249 L ++RF DGL +L + R + W ++ L +G + L + Sbjct 179 LEKSLRF-TAQEVERGDGLDVETLALPPGGGAFLRLVSCWSRMKKLNRIGAYKLLAAIDS 237 Query 250 YLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASAVLSLPACEW 309 P R AP + A++ S D G L AG V R W G P+ V+S Sbjct 238 -APVRNAPALLAISAS-DSMLGGLNAGRVMCRAWSYLNAEGLACHPY---YVISDQLERL 292 Query 310 VAPHVRAALVGGWNLLAPGHWP----------MMVFRIGHARAPSVRTMRQSVE 353 V L G + P MM+ R+G+ + ++R+ R S+E Sbjct 293 KQDRVPEVLTGQAKDMQKNCQPLFDLKGEQTLMMLLRVGYPKKKALRSRRLSLE 346 >gi|217969907|ref|YP_002355141.1| hypothetical protein Tmz1t_1487 [Thauera sp. MZ1T] gi|217507234|gb|ACK54245.1| conserved hypothetical protein [Thauera sp. MZ1T] Length=368 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 53/195 (28%), Positives = 82/195 (43%), Gaps = 11/195 (5%) Query 21 LVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWRSA---PEHRRIMSLVAIGAAVENVK 77 LV A LAPS+ N + + A R V + D + R P+ + V++G A EN+ Sbjct 58 LVRYATLAPSSHNTQCWKFALAERSVSILPDYSRRCPVVDPDDHHL--FVSLGCAAENLV 115 Query 78 LRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEGAIERRRTNRRVRFRGPPL 137 A +GF + + G V + P R E +R+ T R F PL Sbjct 116 QAAPAMGFHCEAAF---DGEAAEVLNCALAPAPSRRTALFEAIPQRQST--RGEFDSRPL 170 Query 138 SQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSRELHEELFSAVRFD 197 S EL L A +G G+ + + +++L V T + R EL + +RF+ Sbjct 171 SNEELRRLEAAGSG-RGVSVRLLTGAQALERVLEFVVAGNTAQMRDPAFVRELKAWIRFN 229 Query 198 IGWTASSDDGLPPGS 212 A + DGL G+ Sbjct 230 GSDAARTGDGLFAGA 244 >gi|271965011|ref|YP_003339207.1| hypothetical protein Sros_3528 [Streptosporangium roseum DSM 43021] gi|270508186|gb|ACZ86464.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021] Length=330 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 88/348 (26%), Positives = 137/348 (40%), Gaps = 62/348 (17%) Query 1 MRAGRWGPGMTGLDPAEFLSLVEAAALAPSADNRREVQL-EHAGRRVRLWGDQTWRSAPE 59 ++A W P + P F V+ +A AD+ R+++L + AGR + Sbjct 17 VQAAVWAPSVHNTQPWSFA--VDGEEIALRADSDRKLRLGDAAGREM------------- 61 Query 60 HRRIMSLVAIGAAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRL----PQTRVD 115 L++ GAA+ NV+L LG++ V PD P L+A + + TR+ Sbjct 62 ------LISCGAALMNVRLTLSALGWQPHVRVLPDPDRPALLATVRMGEAVVADEHTRL- 114 Query 116 PIEGAIERRRTNRRVRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRL 175 + IERRRT+ R F P+ + + AL A+A +G +L S + + L Sbjct 115 -LHAEIERRRTH-RAGFTDLPVPERLIEALVAQAQA-EGARLTPVRSEAAVRVLAALTCA 171 Query 176 AETERFRSRELHEELFSAVRFDIGWT----ASSDDGLPPGSLEVEAWMRPMFRGLRHWRV 231 A+ + + R L E+ I W +S DG+P + + R R H+ Sbjct 172 AQDVQSQDRLLTLEM-------ISWAQPPGSSRGDGVP-----AQGYPREPRRTSPHF-- 217 Query 232 LRLLRTVGMHHALGLRAAYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGA 291 R H G A V LTT D +TAG +R+ L + Sbjct 218 --AQRDYAHGHPWGSDADQFFAASTGTVAVLTTPADAREDWITAGQALQRVLLHAS---- 271 Query 292 ELQPFAASAVLSLPACEWVAPHVRAALVGGWNLLAPGHWPMMVFRIGH 339 + A A E V H+R L L G P M+ R+G+ Sbjct 272 ---AYDVHAAFHTQALEMV--HLREFL---REELLSGRHPQMIMRLGY 311 >gi|240171846|ref|ZP_04750505.1| hypothetical protein MkanA1_21200 [Mycobacterium kansasii ATCC 12478] Length=335 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/161 (25%), Positives = 79/161 (50%), Gaps = 8/161 (4%) Query 14 DPAEFLSLVEAAALAPSADNRREVQLEHAGRRVRLWGD---QTWRSAPEHRRIMSLVAIG 70 D +++ A+ APS N + + + L+ D Q + PE R + +++ G Sbjct 9 DAGTVRTVLTLASRAPSVHNTQPWRWRVGDASLHLYADTSLQLPNTDPEGRDL--ILSCG 66 Query 71 AAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDP-IEGAIERRRTNRR 129 AA+ + + G++ KVC P+ +P +A I+V R ++D + AI RRRT+RR Sbjct 67 AALNHCIIALAATGWQAKVCRLPNPADPSHLASIEVSRQNADQLDIMLAAAIPRRRTDRR 126 Query 130 VRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQIL 170 + P+ ++ ++A A +G+ +H D+ + ++ Sbjct 127 -HYSFWPVPVSDIALMAARA-ARNGVTVHQVDAMDKLNAVV 165 >gi|120403535|ref|YP_953364.1| hypothetical protein Mvan_2547 [Mycobacterium vanbaalenii PYR-1] gi|119956353|gb|ABM13358.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=330 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/162 (28%), Positives = 74/162 (46%), Gaps = 8/162 (4%) Query 14 DPAEFLSLVEAAALAPSADNRREVQLEHAGRRVRLWGDQTW---RSAPEHRRIMSLVAIG 70 D S + A APS N + Q + L+ + P+ R M ++ G Sbjct 7 DSVTLRSALSLANRAPSVHNSQPWQWRVGDHSLHLFANPDLLLPHIDPDARDFM--LSCG 64 Query 71 AAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVD-PIEGAIERRRTNRR 129 A+ + + LG+++KV FP+ +P VA I V R P +D + AI RRRT+RR Sbjct 65 TALNHCVVALAALGWQSKVHRFPNPADPNHVAAIQVHRYPAAELDITLAAAIPRRRTDRR 124 Query 130 VRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILR 171 + P+ +G++ + A A G+ L D + K+++ Sbjct 125 -HYSPWPVPRGDIALMGARAARA-GVMLRRVDDLDALKRLVN 164 >gi|256376040|ref|YP_003099700.1| nitroreductase [Actinosynnema mirum DSM 43827] gi|255920343|gb|ACU35854.1| nitroreductase [Actinosynnema mirum DSM 43827] Length=349 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 84/300 (28%), Positives = 121/300 (41%), Gaps = 30/300 (10%) Query 9 GMTGLDPAEFLSLVEAAALAPSADNRREVQLEHAGRRVRLWGDQTWR---SAPEHRRIMS 65 G+ GL E S++ AAALAPS N + + R+ L D R + PE R + Sbjct 15 GVLGLSEDEVESVLTAAALAPSVHNTQPWRFRLEEDRIELHADLDRRLPATDPEDRELR- 73 Query 66 LVAIGAAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEI--DVDRLPQTRVDPIEGAIER 123 +A GAA+ N++L G V P PG +A + L + A+ Sbjct 74 -LACGAALFNLRLALQGHGIRPLVTLMPGHDAPGALAVVRRGGKLLLDDETHQLLNAVPA 132 Query 124 RRTNRRVRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRS 183 RR+NR+ F P+ AL A + LH PE R ++ R V A + Sbjct 133 RRSNRKP-FHDVPVPVRHRQAL-LRAAERERSWLHVVVDPEERARLQRYVSKAHRIQQAD 190 Query 184 RELHEELFSAVRFDIGWTA--SSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGMH 241 R + +EL WT ++ DG+PP S A RP + W + L G Sbjct 191 RSVLDELGE-------WTGERTAGDGVPPRS----AGPRPAPQD--EWAMRDFLAADG-- 235 Query 242 HALGLRAAYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASAV 301 G RA+ P V L + D + AG +R+ L T LG + F + AV Sbjct 236 ---GERASGKDYESDPLVLVLCSFYDGPLAEVQAGQALQRVLLTATTLGLAVS-FMSQAV 291 >gi|120402964|ref|YP_952793.1| hypothetical protein Mvan_1968 [Mycobacterium vanbaalenii PYR-1] gi|119955782|gb|ABM12787.1| UBA/THIF-type NAD/FAD binding protein [Mycobacterium vanbaalenii PYR-1] Length=726 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 97/369 (27%), Positives = 145/369 (40%), Gaps = 42/369 (11%) Query 6 WGPGMTGLDPAEFLSLVEAAALA----PSADNRREVQLEHAGRRVRLWGDQTWRSAPEHR 61 W P +T DPA+ V A ALA PS N + +E +GR V T R APE + Sbjct 366 WDP-VTVEDPADVRDAVHAVALAANRAPSGGNVQPWHIE-SGRDV-----VTIRVAPEFQ 418 Query 62 RIM------SLVAIGAAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVD 115 + S VA+GAA N ++ A +V + L A + + + Sbjct 419 STIDVGFRGSAVAVGAATFNARVAAAAHQLSGEVTFVEGDDRSPLTAVVTLAEGRDEHLA 478 Query 116 PIEGAIERRRTNRRVRFRGPP--LSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLV 173 + A+ R TNRR G P L + AL A A +G ++ + E + L Sbjct 479 SLYPALAARETNRR---HGTPSELPPATVAALDA-AGRREGARVQLLEDREVIDALGTL- 533 Query 174 RLAETERFR--SRELHEELFSAVRFDIGWTASS--DDGLPPGSLEVEAWMRPMFRGLRHW 229 LAET+R R + LH ++ S +R W D G+ SLE+ A LR Sbjct 534 -LAETDRIRYLTPHLHTDMASELR----WPGDGLPDSGIDVRSLELGAAELVTLDILRRP 588 Query 230 RVLRLLRTVGMHHALGLRAAYLPCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLL 289 V+ LL LG LT + L +G G+ E +W+ Sbjct 589 EVMSLLTAWNAGAVLGADTRARIVNSGALALILTDDISL-TGYARGGSAAEAVWIAAQQH 647 Query 290 GAELQPFAASAVLSLPACEW--VAPHVRAALVG------GWNLLAPGHWPMMVFRIGHAR 341 G +QP + + + A E ++P L + PG ++ R+ A Sbjct 648 GLSVQPISPVFLYAHTADELHELSPRFADRLADLQRRFRQLTAVGPGEATALILRLTSAP 707 Query 342 APSVRTMRQ 350 PSVR+ R+ Sbjct 708 PPSVRSRRR 716 >gi|82701508|ref|YP_411074.1| UBA/THIF-type NAD/FAD binding domain-containing protein [Nitrosospira multiformis ATCC 25196] gi|82409573|gb|ABB73682.1| UBA/THIF-type NAD/FAD binding fold protein [Nitrosospira multiformis ATCC 25196] Length=684 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 64/240 (27%), Positives = 97/240 (41%), Gaps = 20/240 (8%) Query 65 SLVAIGAAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEGAIERR 124 S ++IGA +E + + A G +T + PD + +I P + DP+ I R Sbjct 378 SQISIGALLETISIAATGHGLKTSIQRRPDCSDTKPTFDIHFGSDPHLKPDPLIPYIRYR 437 Query 125 RTNRRVRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSR 184 RR PL+ E AL EA + W + R ++ R + + + R Sbjct 438 SVQRRP-MSTRPLTGREKSAL--EAAVKPQYDILWLEGFSRRLEMARFL----FDNAKLR 490 Query 185 ELHEELFSAVRFDIGWTA-SSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGMHHA 243 + E + R I W + S D +P +L V+ P L HW + R + Sbjct 491 LIMPEAYQVHRAIIQWNSRYSADKVPDQALGVD----PFTARLMHWIMGSWDRVEFFNTF 546 Query 244 L-GLRAAYLPCRLAPHVGALTTSLDLASGA-------LTAGAVFERIWLRTTLLGAELQP 295 L G A L L P + + LA A ++AG V +R WL T LG +LQP Sbjct 547 LAGTWAPRLQMDLIPAMACGGHFVILAPHAPRSIDDYVSAGRVMQRFWLTATKLGLQLQP 606 >gi|331700104|ref|YP_004336343.1| hypothetical protein Psed_6394 [Pseudonocardia dioxanivorans CB1190] gi|326954793|gb|AEA28490.1| hypothetical protein Psed_6394 [Pseudonocardia dioxanivorans CB1190] Length=413 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 80/297 (27%), Positives = 109/297 (37%), Gaps = 36/297 (12%) Query 67 VAIGAAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEGAIERRRT 126 V +G AVEN+ + G G V PD G G R DP+ I+RR T Sbjct 134 VGLGCAVENLVIGCGPRGLAPSVELLPD-GAGGARVAHVALVAAAPRTDPLHDVIDRRHT 192 Query 127 NRRVRFRGPPLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSREL 186 NR GP ++ AL+ G+ LHW P+ R + L+ A R + Sbjct 193 NRGPFLTGP----VDVSALAVPPP--PGLALHWITDPQPRAALGTLLVDAAEALCRDEQQ 246 Query 187 HEELFSAVRFDIGWTASSDD-------GLPPGSLEVEAWMRPMFR--GLRHWRVLRLLRT 237 + F+ R D GL P L V + R G R W + RT Sbjct 247 SIDNFAWFRATNDEVQRHRDGLVLDGQGLSPVELGVAKLLPASSRTAGDRFW----IDRT 302 Query 238 VGMHHALGLRAAYLPCRLAPHVGALTTS-LDLASGALTAGAVFERIWLRTTLLGAELQPF 296 +H A AAY G +T + D L AG + +R+ LR TL G L Sbjct 303 RDVHTATA--AAY---------GVITVADPDDRRIRLDAGRLLQRVHLRATLAGIGLHHM 351 Query 297 -AASAVLSLPACEWVAPHVRAALVGGWNLLAPGHWPMMVFRIGHARAPSVRTMRQSV 352 + + A P LL G P++ FR+G T R+SV Sbjct 352 NQVTERIDREAATGATPTFGPRFAA---LLPAGGHPLLTFRVGRPVRDGRPTPRRSV 405 >gi|296170987|ref|ZP_06852482.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894423|gb|EFG74170.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=336 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 82/331 (25%), Positives = 131/331 (40%), Gaps = 50/331 (15%) Query 22 VEAAALAPSADNRREVQLEHAGRRVRLWGDQTWRSAPEHRRIMSLVAIGAAVENVKLRAG 81 V +A APS N + Q G RV L+ D + + +L++ GAA++++++ Sbjct 26 VRSACRAPSLHNSQPWQWVAGGGRVDLFLDASRAMVSDRSGREALISCGAALDHLRVALA 85 Query 82 RLGFETKVCWFPDSGNPGLVAEIDVDRLP-QTRVDPIE---GAIERRRTNRRVRFRGP-- 135 G+ ++ FPD +P +A +DV +P Q D + GAI RRT+ R+ F P Sbjct 86 AAGWRARISRFPDPADPNHLASVDV--IPAQDVTDDVRRRAGAIWTRRTD-RLPFVAPMN 142 Query 136 --PLSQGELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSRELHEELFSA 193 GA+ +A +D + + E R + + +AE+ R + EEL Sbjct 143 WEAFEPSLRGAIDGDAVHLDVM------ADEMRDMLAQASSVAESVRLYDQAYQEELH-- 194 Query 194 VRFDIGWTA--SSDDGLPPGSLEVEAWMRPMFRGLRHWRVLRLLRTVGMHHALGLRAAYL 251 WTA + +G+P +L A + G RT H R Sbjct 195 -----WWTAPFEATEGVPYSALVSPAERERVDVG----------RTFPTTHDPERRTEV- 238 Query 252 PCRLAPHVGALTTSLDLASGALTAGAVFERIWLRTTLLGAELQPFAASAVLSLPACEWVA 311 R + L+T D AL +G + L T+ P L + E +A Sbjct 239 -PRDESTILVLSTDDDTRLAALVSGEALSAVLLECTMANLATCPVTHVTELKV-TREMIA 296 Query 312 PHVRAALVGGWNLLAPGHWPMMVFRIGHARA 342 NLL G P ++ R+G A A Sbjct 297 -----------NLLDEGRRPQVLVRVGLAPA 316 >gi|297196861|ref|ZP_06914258.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gi|197711545|gb|EDY55579.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] Length=400 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 42/144 (30%), Positives = 60/144 (42%), Gaps = 13/144 (9%) Query 66 LVAIGAAVENVKLRAGRLGFETKVCWFPDSGNPGLVAEIDVDRLPQTRVDPIEGAIERRR 125 +G AVEN+ + AG GF V FPD VA I + + + + AI R Sbjct 118 FAGLGCAVENMVIAAGPAGFSADVTLFPDGIASDRVARIALQKGGTGQDRDLAAAIPHRH 177 Query 126 TNRRVRFRGPPLSQG-ELGALSAEATGIDGIQLHWFDSPETRKQILRLVRLAETERFRSR 184 TN RGP S +L + +++ I+G + W TR+Q+ RL A Sbjct 178 TN-----RGPYTSAPVDLSGFTEQSSRIEGANVLWIADRTTREQLGRLYVEATEAITADT 232 Query 185 ELHEELFSAVRFDIGWTASSDDGL 208 + E F GW SS D + Sbjct 233 DQSTEAF-------GWFRSSRDSI 249 Lambda K H 0.323 0.136 0.431 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 709746472050 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40