BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2338c
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
gi|339295242|gb|AEJ47353.1| hypothetical protein CCDC5079_2163 [... 652 0.0
gi|15609475|ref|NP_216854.1| hypothetical protein Rv2338c [Mycob... 652 0.0
gi|254551385|ref|ZP_05141832.1| hypothetical protein Mtube_13140... 650 0.0
gi|308232105|ref|ZP_07414934.2| molybdopterin biosynthesis prote... 588 5e-166
gi|254232482|ref|ZP_04925809.1| molybdopterin biosynthesis prote... 535 3e-150
gi|289750944|ref|ZP_06510322.1| molybdopterin biosynthesis prote... 525 4e-147
gi|289443855|ref|ZP_06433599.1| possible molybdopterin biosynthe... 522 3e-146
gi|294994560|ref|ZP_06800251.1| hypothetical protein Mtub2_08588... 327 2e-87
gi|224371717|ref|YP_002605881.1| hypothetical protein HRM2_46610... 255 5e-66
gi|292493252|ref|YP_003528691.1| UBA/THIF-type NAD/FAD binding p... 255 6e-66
gi|254471277|ref|ZP_05084679.1| dinucleotide-utilizing enzyme in... 254 9e-66
gi|88704017|ref|ZP_01101732.1| molybdopterin biosynthesis protei... 251 9e-65
gi|77165461|ref|YP_343986.1| molybdopterin/thiamine biosynthesis... 250 2e-64
gi|114319313|ref|YP_740996.1| hypothetical protein Mlg_0151 [Alk... 249 6e-64
gi|121998307|ref|YP_001003094.1| hypothetical protein Hhal_1525 ... 244 1e-62
gi|334132898|ref|ZP_08506653.1| MoeB/ThiF-like protein [Methylov... 242 6e-62
gi|332525229|ref|ZP_08401403.1| hypothetical protein RBXJA2T_053... 241 1e-61
gi|217970040|ref|YP_002355274.1| hypothetical protein Tmz1t_1623... 240 2e-61
gi|46562213|ref|YP_009074.1| hypothetical protein DVUA0034 [Desu... 239 4e-61
gi|120586929|ref|YP_961274.1| hypothetical protein Dvul_3075 [De... 239 5e-61
gi|78223253|ref|YP_385000.1| hypothetical protein Gmet_2046 [Geo... 238 1e-60
gi|224369119|ref|YP_002603283.1| hypothetical protein HRM2_20180... 236 5e-60
gi|323698630|ref|ZP_08110542.1| UBA/THIF-type NAD/FAD binding pr... 235 8e-60
gi|251771764|gb|EES52339.1| UBA/THIF-type NAD/FAD binding protei... 234 1e-59
gi|256830000|ref|YP_003158728.1| UBA/THIF-type NAD/FAD binding p... 234 2e-59
gi|82701508|ref|YP_411074.1| UBA/THIF-type NAD/FAD binding domai... 232 5e-59
gi|88799463|ref|ZP_01115040.1| hypothetical protein MED297_03742... 231 9e-59
gi|22535384|gb|AAM97302.1| FeeI [uncultured bacterium] 231 2e-58
gi|56479527|ref|YP_161116.1| hypothetical protein ebA7215 [Aroma... 230 3e-58
gi|289209662|ref|YP_003461728.1| UBA/THIF-type NAD/FAD binding p... 229 3e-58
gi|333984838|ref|YP_004514048.1| UBA/THIF-type NAD/FAD binding p... 227 2e-57
gi|183238965|gb|ACC61053.1| NAD/FAD-binding protein [uncultured ... 226 3e-57
gi|257094485|ref|YP_003168126.1| hypothetical protein CAP2UW1_29... 225 8e-57
gi|71908015|ref|YP_285602.1| hypothetical protein Daro_2396 [Dec... 223 3e-56
gi|344342660|ref|ZP_08773531.1| UBA/THIF-type NAD/FAD binding pr... 222 6e-56
gi|78355869|ref|YP_387318.1| hypothetical protein Dde_0822 [Desu... 221 1e-55
gi|342906343|gb|ABB37623.2| UBA/THIF-type NAD/FAD binding protei... 221 1e-55
gi|333983030|ref|YP_004512240.1| UBA/THIF-type NAD/FAD binding p... 218 9e-55
gi|88812577|ref|ZP_01127825.1| UBA/THIF-type NAD/FAD binding fol... 218 1e-54
gi|218885796|ref|YP_002435117.1| hypothetical protein DvMF_0692 ... 214 1e-53
gi|337286752|ref|YP_004626225.1| UBA/THIF-type NAD/FAD binding p... 209 3e-52
gi|333892213|ref|YP_004466088.1| hypothetical protein ambt_03680... 203 2e-50
gi|74316209|ref|YP_313949.1| hypothetical protein Tbd_0191 [Thio... 200 2e-49
gi|290973313|ref|XP_002669393.1| predicted protein [Naegleria gr... 199 6e-49
gi|149911231|ref|ZP_01899854.1| Dinucleotide-utilizing enzyme in... 167 2e-39
gi|301385898|ref|ZP_07234316.1| hypothetical protein PsyrptM_248... 146 3e-33
gi|213970232|ref|ZP_03398363.1| conserved hypothetical protein [... 140 2e-31
gi|333986396|ref|YP_004519003.1| UBA/THIF-type NAD/FAD binding p... 110 2e-22
gi|229079506|ref|ZP_04212045.1| Molybdopterin biosynthesis prote... 109 5e-22
gi|229079507|ref|ZP_04212046.1| Molybdopterin biosynthesis prote... 109 7e-22
>gi|339295242|gb|AEJ47353.1| hypothetical protein CCDC5079_2163 [Mycobacterium tuberculosis
CCDC5079]
Length=345
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/318 (100%), Positives = 318/318 (100%), Gaps = 0/318 (0%)
Query 1 MRAGADAPDSGRVKESAPWSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVA 60
MRAGADAPDSGRVKESAPWSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVA
Sbjct 28 MRAGADAPDSGRVKESAPWSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVA 87
Query 61 LARMGIGKFTIADPDVFEIRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEP 120
LARMGIGKFTIADPDVFEIRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEP
Sbjct 88 LARMGIGKFTIADPDVFEIRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEP 147
Query 121 IGKENAATFLEGADVLVDGIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPK 180
IGKENAATFLEGADVLVDGIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPK
Sbjct 148 IGKENAATFLEGADVLVDGIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPK 207
Query 181 GMTFDRYFDLSDAMNTVDKFVAFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLAS 240
GMTFDRYFDLSDAMNTVDKFVAFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLAS
Sbjct 208 GMTFDRYFDLSDAMNTVDKFVAFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLAS 267
Query 241 GVVAAEVLKILLGHGRVYAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYINR 300
GVVAAEVLKILLGHGRVYAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYINR
Sbjct 268 GVVAAEVLKILLGHGRVYAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYINR 327
Query 301 RSAGVIPGLRYHRTEPSY 318
RSAGVIPGLRYHRTEPSY
Sbjct 328 RSAGVIPGLRYHRTEPSY 345
>gi|15609475|ref|NP_216854.1| hypothetical protein Rv2338c [Mycobacterium tuberculosis H37Rv]
gi|15841842|ref|NP_336879.1| hypothetical protein MT2401 [Mycobacterium tuberculosis CDC1551]
gi|31793522|ref|NP_856015.1| hypothetical protein Mb2366c [Mycobacterium bovis AF2122/97]
45 more sequence titles
Length=318
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/318 (100%), Positives = 318/318 (100%), Gaps = 0/318 (0%)
Query 1 MRAGADAPDSGRVKESAPWSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVA 60
MRAGADAPDSGRVKESAPWSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVA
Sbjct 1 MRAGADAPDSGRVKESAPWSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVA 60
Query 61 LARMGIGKFTIADPDVFEIRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEP 120
LARMGIGKFTIADPDVFEIRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEP
Sbjct 61 LARMGIGKFTIADPDVFEIRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEP 120
Query 121 IGKENAATFLEGADVLVDGIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPK 180
IGKENAATFLEGADVLVDGIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPK
Sbjct 121 IGKENAATFLEGADVLVDGIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPK 180
Query 181 GMTFDRYFDLSDAMNTVDKFVAFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLAS 240
GMTFDRYFDLSDAMNTVDKFVAFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLAS
Sbjct 181 GMTFDRYFDLSDAMNTVDKFVAFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLAS 240
Query 241 GVVAAEVLKILLGHGRVYAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYINR 300
GVVAAEVLKILLGHGRVYAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYINR
Sbjct 241 GVVAAEVLKILLGHGRVYAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYINR 300
Query 301 RSAGVIPGLRYHRTEPSY 318
RSAGVIPGLRYHRTEPSY
Sbjct 301 RSAGVIPGLRYHRTEPSY 318
>gi|254551385|ref|ZP_05141832.1| hypothetical protein Mtube_13140 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
Length=318
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/318 (99%), Positives = 317/318 (99%), Gaps = 0/318 (0%)
Query 1 MRAGADAPDSGRVKESAPWSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVA 60
MRAGADAPDSGRVKESAPWSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVA
Sbjct 1 MRAGADAPDSGRVKESAPWSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVA 60
Query 61 LARMGIGKFTIADPDVFEIRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEP 120
LARMGIGKFTIADPDVFEIRNSNR YGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEP
Sbjct 61 LARMGIGKFTIADPDVFEIRNSNRHYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEP 120
Query 121 IGKENAATFLEGADVLVDGIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPK 180
IGKENAATFLEGADVLVDGIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPK
Sbjct 121 IGKENAATFLEGADVLVDGIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPK 180
Query 181 GMTFDRYFDLSDAMNTVDKFVAFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLAS 240
GMTFDRYFDLSDAMNTVDKFVAFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLAS
Sbjct 181 GMTFDRYFDLSDAMNTVDKFVAFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLAS 240
Query 241 GVVAAEVLKILLGHGRVYAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYINR 300
GVVAAEVLKILLGHGRVYAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYINR
Sbjct 241 GVVAAEVLKILLGHGRVYAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYINR 300
Query 301 RSAGVIPGLRYHRTEPSY 318
RSAGVIPGLRYHRTEPSY
Sbjct 301 RSAGVIPGLRYHRTEPSY 318
>gi|308232105|ref|ZP_07414934.2| molybdopterin biosynthesis protein moeW [Mycobacterium tuberculosis
SUMu001]
gi|308369692|ref|ZP_07418713.2| molybdopterin biosynthesis protein moeW [Mycobacterium tuberculosis
SUMu002]
gi|308370979|ref|ZP_07423443.2| molybdopterin biosynthesis protein moeW [Mycobacterium tuberculosis
SUMu003]
13 more sequence titles
Length=288
Score = 588 bits (1515), Expect = 5e-166, Method: Compositional matrix adjust.
Identities = 287/288 (99%), Positives = 288/288 (100%), Gaps = 0/288 (0%)
Query 31 LISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFEIRNSNRQYGAMR 90
+ISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFEIRNSNRQYGAMR
Sbjct 1 MISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFEIRNSNRQYGAMR 60
Query 91 STNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVDGIDAFEIDLRRL 150
STNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVDGIDAFEIDLRRL
Sbjct 61 STNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVDGIDAFEIDLRRL 120
Query 151 LYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVDKFVAFIAGIAPS 210
LYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVDKFVAFIAGIAPS
Sbjct 121 LYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVDKFVAFIAGIAPS 180
Query 211 ATHRRSIDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRVYAAPYFHQFDAYR 270
ATHRRSIDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRVYAAPYFHQFDAYR
Sbjct 181 ATHRRSIDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRVYAAPYFHQFDAYR 240
Query 271 SIYVRKRLRCGNRHPLQRVKRRLLARYINRRSAGVIPGLRYHRTEPSY 318
SIYVRKRLRCGNRHPLQRVKRRLLARYINRRSAGVIPGLRYHRTEPSY
Sbjct 241 SIYVRKRLRCGNRHPLQRVKRRLLARYINRRSAGVIPGLRYHRTEPSY 288
>gi|254232482|ref|ZP_04925809.1| molybdopterin biosynthesis protein moeW [Mycobacterium tuberculosis
C]
gi|124601541|gb|EAY60551.1| molybdopterin biosynthesis protein moeW [Mycobacterium tuberculosis
C]
Length=261
Score = 535 bits (1379), Expect = 3e-150, Method: Compositional matrix adjust.
Identities = 261/261 (100%), Positives = 261/261 (100%), Gaps = 0/261 (0%)
Query 58 MVALARMGIGKFTIADPDVFEIRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAF 117
MVALARMGIGKFTIADPDVFEIRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAF
Sbjct 1 MVALARMGIGKFTIADPDVFEIRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAF 60
Query 118 CEPIGKENAATFLEGADVLVDGIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVF 177
CEPIGKENAATFLEGADVLVDGIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVF
Sbjct 61 CEPIGKENAATFLEGADVLVDGIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVF 120
Query 178 DPKGMTFDRYFDLSDAMNTVDKFVAFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACH 237
DPKGMTFDRYFDLSDAMNTVDKFVAFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACH
Sbjct 121 DPKGMTFDRYFDLSDAMNTVDKFVAFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACH 180
Query 238 LASGVVAAEVLKILLGHGRVYAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARY 297
LASGVVAAEVLKILLGHGRVYAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARY
Sbjct 181 LASGVVAAEVLKILLGHGRVYAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARY 240
Query 298 INRRSAGVIPGLRYHRTEPSY 318
INRRSAGVIPGLRYHRTEPSY
Sbjct 241 INRRSAGVIPGLRYHRTEPSY 261
>gi|289750944|ref|ZP_06510322.1| molybdopterin biosynthesis protein moeW [Mycobacterium tuberculosis
T92]
gi|289754443|ref|ZP_06513821.1| molybdopterin biosynthesis protein moeW [Mycobacterium tuberculosis
EAS054]
gi|308404730|ref|ZP_07494121.2| molybdopterin biosynthesis protein moeW [Mycobacterium tuberculosis
SUMu012]
gi|289691531|gb|EFD58960.1| molybdopterin biosynthesis protein moeW [Mycobacterium tuberculosis
T92]
gi|289695030|gb|EFD62459.1| molybdopterin biosynthesis protein moeW [Mycobacterium tuberculosis
EAS054]
gi|308365459|gb|EFP54310.1| molybdopterin biosynthesis protein moeW [Mycobacterium tuberculosis
SUMu012]
gi|323719247|gb|EGB28392.1| molybdopterin biosynthesis protein moeW [Mycobacterium tuberculosis
CDC1551A]
gi|339298862|gb|AEJ50972.1| hypothetical protein CCDC5180_2135 [Mycobacterium tuberculosis
CCDC5180]
Length=255
Score = 525 bits (1352), Expect = 4e-147, Method: Compositional matrix adjust.
Identities = 255/255 (100%), Positives = 255/255 (100%), Gaps = 0/255 (0%)
Query 64 MGIGKFTIADPDVFEIRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGK 123
MGIGKFTIADPDVFEIRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGK
Sbjct 1 MGIGKFTIADPDVFEIRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGK 60
Query 124 ENAATFLEGADVLVDGIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMT 183
ENAATFLEGADVLVDGIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMT
Sbjct 61 ENAATFLEGADVLVDGIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMT 120
Query 184 FDRYFDLSDAMNTVDKFVAFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLASGVV 243
FDRYFDLSDAMNTVDKFVAFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLASGVV
Sbjct 121 FDRYFDLSDAMNTVDKFVAFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLASGVV 180
Query 244 AAEVLKILLGHGRVYAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYINRRSA 303
AAEVLKILLGHGRVYAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYINRRSA
Sbjct 181 AAEVLKILLGHGRVYAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYINRRSA 240
Query 304 GVIPGLRYHRTEPSY 318
GVIPGLRYHRTEPSY
Sbjct 241 GVIPGLRYHRTEPSY 255
>gi|289443855|ref|ZP_06433599.1| possible molybdopterin biosynthesis protein moew [Mycobacterium
tuberculosis T46]
gi|289570472|ref|ZP_06450699.1| molybdopterin biosynthesis protein moeW [Mycobacterium tuberculosis
T17]
gi|289416774|gb|EFD14014.1| possible molybdopterin biosynthesis protein moew [Mycobacterium
tuberculosis T46]
gi|289544226|gb|EFD47874.1| molybdopterin biosynthesis protein moeW [Mycobacterium tuberculosis
T17]
Length=255
Score = 522 bits (1344), Expect = 3e-146, Method: Compositional matrix adjust.
Identities = 254/255 (99%), Positives = 254/255 (99%), Gaps = 0/255 (0%)
Query 64 MGIGKFTIADPDVFEIRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGK 123
MGIGKFTIADPDVFEIRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGK
Sbjct 1 MGIGKFTIADPDVFEIRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGK 60
Query 124 ENAATFLEGADVLVDGIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMT 183
ENAATFLEGADVLVDGIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMT
Sbjct 61 ENAATFLEGADVLVDGIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMT 120
Query 184 FDRYFDLSDAMNTVDKFVAFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLASGVV 243
FDRYFDLSDAMNTVDKFVAFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLASGVV
Sbjct 121 FDRYFDLSDAMNTVDKFVAFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLASGVV 180
Query 244 AAEVLKILLGHGRVYAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYINRRSA 303
AAEVLKILL HGRVYAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYINRRSA
Sbjct 181 AAEVLKILLRHGRVYAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYINRRSA 240
Query 304 GVIPGLRYHRTEPSY 318
GVIPGLRYHRTEPSY
Sbjct 241 GVIPGLRYHRTEPSY 255
>gi|294994560|ref|ZP_06800251.1| hypothetical protein Mtub2_08588 [Mycobacterium tuberculosis
210]
Length=188
Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 158/159 (99%), Positives = 159/159 (100%), Gaps = 0/159 (0%)
Query 137 VDGIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNT 196
+DGIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNT
Sbjct 1 MDGIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNT 60
Query 197 VDKFVAFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGR 256
VDKFVAFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGR
Sbjct 61 VDKFVAFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGR 120
Query 257 VYAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLA 295
VYAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLA
Sbjct 121 VYAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLA 159
>gi|224371717|ref|YP_002605881.1| hypothetical protein HRM2_46610 [Desulfobacterium autotrophicum
HRM2]
gi|223694434|gb|ACN17717.1| UBA/THIF-type NAD/FAD binding family protein [Desulfobacterium
autotrophicum HRM2]
Length=681
Score = 255 bits (652), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 120/281 (43%), Positives = 179/281 (64%), Gaps = 1/281 (0%)
Query 23 EAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFEIRNS 82
EAF RN+GL++P EQ+ L S++AI GMGGVG ++ + R GIG+F IAD D++E N
Sbjct 24 EAFSRNIGLLTPEEQEILAKSKIAIPGMGGVGSAHLITMVRTGIGRFNIADFDIYEPANV 83
Query 83 NRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVDGIDA 142
NRQ+GA G+ K +VM+ INP EI F + I EN FL+G V++D +D
Sbjct 84 NRQFGARVPDFGRPKLDVMKEQALSINPFLEITEFPDGINAENMDLFLDGVSVVIDSLDF 143
Query 143 FEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDP-KGMTFDRYFDLSDAMNTVDKFV 201
F D+RR L+ A+++GIY + AGPLGF +A +VF P +G+ FD YF++ + M D+++
Sbjct 144 FAFDIRRQLFNRAREKGIYVITAGPLGFGSAMLVFAPDRGIAFDDYFNIIEDMKPEDQYL 203
Query 202 AFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRVYAAP 261
AF G+AP A + +D S + ++R GPS+ +AC L +G+ E ++I+LG G + P
Sbjct 204 AFAMGLAPKALQFKYMDTSKLSFKSRKGPSLNIACQLCTGMAGTEAVRIILGKGMIKPVP 263
Query 262 YFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYINRRS 302
Y+ QFD Y Y K+L GN+HP QR+K L+ + + R +
Sbjct 264 YYSQFDPYLRKYCIKKLNMGNKHPWQRIKTVLVKKMLTRNT 304
>gi|292493252|ref|YP_003528691.1| UBA/THIF-type NAD/FAD binding protein [Nitrosococcus halophilus
Nc4]
gi|291581847|gb|ADE16304.1| UBA/THIF-type NAD/FAD binding protein [Nitrosococcus halophilus
Nc4]
Length=669
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 131/293 (45%), Positives = 186/293 (64%), Gaps = 2/293 (0%)
Query 14 KESAPWSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIAD 73
++S+ + ++EAF RN+G +S EQQ LR +VAIAGMGGVGG ++ L R+G+G F +AD
Sbjct 16 RKSSSFVFEEAFSRNIGWLSEWEQQILRTKKVAIAGMGGVGGTHLLTLVRLGVGAFHVAD 75
Query 74 PDVFEIRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGA 133
D+FE+ N NRQ GA ST Q KAEV+ + DINPE ++ F I ++N FL+ A
Sbjct 76 FDIFELPNFNRQVGATVSTISQPKAEVVAQMARDINPELDLTLFPAGINQDNIDAFLKDA 135
Query 134 DVLVDGIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDA 193
D+ VDG D F +D+R ++ + GI A+ A P+G TA++VF P MTF+ YF L +
Sbjct 136 DLFVDGFDFFVLDMRAQVFARCAELGIPAITAAPIGMGTAYLVFMPGHMTFEEYFRL-EG 194
Query 194 MNTVDKFVAFIAGIAPSATHRRS-IDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILL 252
+ ++V F+ G+AP A HR +D S +D+ R GPS + C L +GV AE LKILL
Sbjct 195 LPIEQQYVNFLVGLAPKAFHRSYLVDPSRLDLAARRGPSTAMGCQLCAGVTGAEALKILL 254
Query 253 GHGRVYAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYINRRSAGV 305
G G + AP +HQ+DAYR + L GNR+P+Q KR++ R + + S GV
Sbjct 255 GRGPIRPAPRYHQYDAYRGKWHLGWLPAGNRNPIQVFKRKMGYRMLTQLSHGV 307
>gi|254471277|ref|ZP_05084679.1| dinucleotide-utilizing enzyme involved in molybdopterin and thiamine
biosynthesis family 1 [Pseudovibrio sp. JE062]
gi|211959423|gb|EEA94621.1| dinucleotide-utilizing enzyme involved in molybdopterin and thiamine
biosynthesis family 1 [Pseudovibrio sp. JE062]
Length=300
Score = 254 bits (650), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 132/286 (47%), Positives = 182/286 (64%), Gaps = 3/286 (1%)
Query 3 AGADAPDSGRVKESAPWSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALA 62
A + P+ V SA +SY+ AF RN+G ++ EQQ LR RVAIAGMGGVGGI V LA
Sbjct 5 AASQVPEVSPVA-SAGFSYEAAFSRNIGWVTEEEQQLLRGKRVAIAGMGGVGGIHAVTLA 63
Query 63 RMGIGKFTIADPDVFEIRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIG 122
R+GIG F++AD D F+I N NRQ GA ST + K VM V +INPEA++R F + +
Sbjct 64 RLGIGAFSVADFDHFDIVNFNRQIGATVSTLQEPKVSVMSEQVRNINPEADLRVFPDGVT 123
Query 123 KENAATFLEGADVLVDGIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGM 182
EN FLEG D+ VDG D F + +RR ++ + ++ GI A+ A PLG TA++ F P GM
Sbjct 124 DENIDAFLEGVDMFVDGFDFFVLGMRRKVFAKCRELGIPAVTAAPLGMGTAYLCFTPDGM 183
Query 183 TFDRYFDLSDAMNTVDKFVAFIAGIAPSATHRRS-IDLSYVDIENRTGPSVGLACHLASG 241
+F+ YF + + + ++ F+ G+APSA HR S +D S +++ GPS C LA+G
Sbjct 184 SFEDYFQF-EGEDELHQYFKFLLGLAPSALHRHSLVDTSQLNLSEERGPSTAAGCQLAAG 242
Query 242 VVAAEVLKILLGHGRVYAAPYFHQFDAYRSIYVRKRLRCGNRHPLQ 287
VV A+ +K+LLG G + AP++H FDAY +V KRL GN + Q
Sbjct 243 VVGAQAVKLLLGRGPLKPAPWYHHFDAYEGKFVTKRLPSGNSNFFQ 288
>gi|88704017|ref|ZP_01101732.1| molybdopterin biosynthesis protein MoeB [Congregibacter litoralis
KT71]
gi|88701844|gb|EAQ98948.1| molybdopterin biosynthesis protein MoeB [Congregibacter litoralis
KT71]
Length=292
Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 127/272 (47%), Positives = 171/272 (63%), Gaps = 1/272 (0%)
Query 19 WSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFE 78
+ Y++AF RN+G +S EQQ LRN R+AIAGMGGVGG V +AR+G G+FTI+D DVFE
Sbjct 5 FDYEDAFSRNIGWLSLEEQQLLRNKRIAIAGMGGVGGDHAVRMARLGAGRFTISDLDVFE 64
Query 79 IRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVD 138
N NRQYGA T Q K EVM ++ INPEA+IR F + + EN FL GAD+ +D
Sbjct 65 QANFNRQYGATMDTVDQTKVEVMEKLLLSINPEADIRNFPDGVSDENVDDFLAGADLYID 124
Query 139 GIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVD 198
+D F +D+RR ++R ++ GI A+ A P+G TA +VF P ++FD YFD + D
Sbjct 125 SLDFFALDIRRTVFRRCRELGIPAITAAPMGMGTALLVFTPDSISFDDYFDFDSVESWED 184
Query 199 KFVAFIAGIAPSATHRRS-IDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRV 257
K + F+ G++PS R + S +D R PS GL LA+GV +K+LLG G +
Sbjct 185 KMIKFLIGLSPSMQQRHYLVGDSAIDFNTRKVPSTGLGISLAAGVACTTAVKLLLGRGPI 244
Query 258 YAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRV 289
AP FDAYR+ YV+ GNR+PLQR+
Sbjct 245 VTAPSGLHFDAYRNKYVKTWRPGGNRNPLQRI 276
>gi|77165461|ref|YP_343986.1| molybdopterin/thiamine biosynthesis family protein [Nitrosococcus
oceani ATCC 19707]
gi|254433883|ref|ZP_05047391.1| ThiF family protein [Nitrosococcus oceani AFC27]
gi|76883775|gb|ABA58456.1| Dinucleotide-utilizing enzymes involved in molybdopterin and
thiamine biosynthesis family 1 [Nitrosococcus oceani ATCC 19707]
gi|207090216|gb|EDZ67487.1| ThiF family protein [Nitrosococcus oceani AFC27]
Length=672
Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/286 (47%), Positives = 176/286 (62%), Gaps = 2/286 (0%)
Query 21 YDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFEIR 80
Y EAF RN G ++ EQQ LR +VAIAGMGGVGG+ ++ LAR+GIG F IAD D FE+
Sbjct 26 YQEAFSRNTGWVTEWEQQILRGKKVAIAGMGGVGGVHLLTLARLGIGVFHIADFDDFELP 85
Query 81 NSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVDGI 140
N NRQ GAM ST G+ K EV+ I DINPE ++ F + I + N FLEG D+ VDG
Sbjct 86 NFNRQVGAMVSTLGRPKVEVLAEIARDINPEVDLNIFNKGINRNNVDAFLEGVDLFVDGF 145
Query 141 DAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVDKF 200
D F +D R ++ + GI A+ A P+G TA++VF P MTF+ YF L + + ++
Sbjct 146 DFFVLDRRAHVFARCAELGIPAITAAPIGIGTAYLVFMPGHMTFEEYFCL-EGLPIEQQY 204
Query 201 VAFIAGIAPSATHRRS-IDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRVYA 259
V F+AG+ P HR +D S +D+ R GPS + CHL +G AE LKILLG G V +
Sbjct 205 VNFLAGLTPKGFHRAYLVDSSRLDLAARRGPSTAMGCHLCAGATGAEALKILLGRGPVRS 264
Query 260 APYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYINRRSAGV 305
AP +HQ+DAYR + L GN +P Q KR+ R + + S +
Sbjct 265 APRYHQYDAYRGKWHLGWLPGGNNNPFQLFKRKRGYRMLEQLSQKI 310
>gi|114319313|ref|YP_740996.1| hypothetical protein Mlg_0151 [Alkalilimnicola ehrlichii MLHE-1]
gi|114225707|gb|ABI55506.1| UBA/THIF-type NAD/FAD binding protein [Alkalilimnicola ehrlichii
MLHE-1]
Length=300
Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 134/285 (48%), Positives = 179/285 (63%), Gaps = 5/285 (1%)
Query 17 APWSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDV 76
A + Y AF RN+G ++ E QRLR +RVAIAG+GGVGG ++ LAR+G+G F I+D D
Sbjct 2 AGFDYRTAFTRNVGWVTEEELQRLRRARVAIAGLGGVGGAHLLTLARLGVGAFHISDFDH 61
Query 77 FEIRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVL 136
FE+ N NRQ GA S GQ K EV+ + DINPE ++ F E +G+ N A FL+G DV
Sbjct 62 FELHNMNRQAGACMSRLGQPKVEVLAEMARDINPELDLTLFPEGVGRGNLADFLDGVDVY 121
Query 137 VDGIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNT 196
VDG+D F + RR ++ E +RGI A+ PLG A + FDP+GM+FD YFDL D ++
Sbjct 122 VDGLDFFAFEARRQVFAEVARRGIPAVTVAPLGMGGALLNFDPQGMSFDAYFDLRDGLSD 181
Query 197 VDKFVAFIAGIAPSATHRRSI-DLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHG 255
D + F+ G+AP+ H + D + VD+ + GPS +AC L +G++ EVLKILLG G
Sbjct 182 EDLALRFMMGLAPAMLHMGYLADAAAVDLGAQRGPSTPMACDLCAGIMGTEVLKILLGRG 241
Query 256 RVYAAPYFHQFDAYRSIYVRKRLRCGNRHPLQR----VKRRLLAR 296
RV AP FDAYR GNR+PLQR + RR LA+
Sbjct 242 RVVWAPRGMHFDAYRQRLAHTWRPGGNRNPLQRLLMAIARRRLAK 286
>gi|121998307|ref|YP_001003094.1| hypothetical protein Hhal_1525 [Halorhodospira halophila SL1]
gi|121589712|gb|ABM62292.1| UBA/THIF-type NAD/FAD binding protein [Halorhodospira halophila
SL1]
Length=287
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 136/287 (48%), Positives = 182/287 (64%), Gaps = 8/287 (2%)
Query 17 APWSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDV 76
A + Y AF R LG I+ EQ LR + VAIAG+GGVGG ++ LAR+GIG+F +AD DV
Sbjct 2 ALFEYQTAFKRTLGWITEQEQDTLRKATVAIAGLGGVGGSHLLTLARLGIGRFAVADYDV 61
Query 77 FEIRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVL 136
FE+ N NRQ GA S G+ K +V+ DINPE EI F I N FL+GADV
Sbjct 62 FELHNMNRQAGATISALGRPKVDVLCEKALDINPELEIERFPNGIDAGNVDRFLDGADVY 121
Query 137 VDGIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNT 196
VDG+D F D+R+L++R+A R I A A PLG S A++ F P G++F+RYF L +
Sbjct 122 VDGLDFFVYDIRQLVFRQAATRHIPAFTAAPLGMSVAFLAFHPGGISFERYFQLDPELEE 181
Query 197 VDKFVAFIAGIAPSATHRRS-IDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHG 255
+K + F+ G+APS H S I+ S +D++ ++GPS +AC L +GV+ EVLK LL G
Sbjct 182 DEKALRFMLGLAPSGLHAASLINPSAIDLKGQSGPSTPMACELCAGVMGTEVLKWLLQRG 241
Query 256 RVYAAPYFHQFDAYRSIYVRKRLR-CGNRHPLQRV-----KRRLLAR 296
Y AP+ QFDAYR + VR+ R GN HP+QR+ +RRLL +
Sbjct 242 TTYWAPWAVQFDAYR-MRVRRTWRPGGNAHPVQRLGLWLARRRLLGQ 287
>gi|334132898|ref|ZP_08506653.1| MoeB/ThiF-like protein [Methyloversatilis universalis FAM5]
gi|333441808|gb|EGK69780.1| MoeB/ThiF-like protein [Methyloversatilis universalis FAM5]
Length=291
Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 129/290 (45%), Positives = 182/290 (63%), Gaps = 6/290 (2%)
Query 16 SAPWSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPD 75
+ +SY+EAF RNLG + EQ RLR S +AIAG+GGVGGI ++ LAR+GI +F IAD D
Sbjct 2 TTQFSYEEAFSRNLGWFTEAEQARLRRSTIAIAGLGGVGGIHLLTLARLGISRFRIADFD 61
Query 76 VFEIRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADV 135
F + N NRQ GA ST + K EV+ DINP+ EI F + + ++ +FL+GADV
Sbjct 62 TFGVHNFNRQVGATMSTLDRPKIEVLAEQARDINPDIEIECFPQGVSPDDPDSFLKGADV 121
Query 136 LVDGIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMN 195
VDG+D F RR + + GI A+ A PLG T +VF P+GM+F+ YF L + +
Sbjct 122 YVDGLDFFAFSARRATFAACHRLGIPAVTAAPLGMGTGLLVFSPQGMSFEEYFRL-EGCD 180
Query 196 TVDKFVAFIAGIAPSATHRRS-IDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGH 254
++ + F+ G+AP+ HR ++ S +D+ N+ GPS +AC+L +GV AAE +K+LLG
Sbjct 181 ETEQALRFLVGLAPAGLHRPYLVEPSRIDLANKRGPSTMIACNLCAGVAAAETVKLLLGR 240
Query 255 GRVYAAPYFHQFDAYRSIYVRKRLRCGNRHPLQR----VKRRLLARYINR 300
G V AP+ QFDA+R+ VR GN +P+QR + RR L + I R
Sbjct 241 GDVRPAPWGLQFDAFRNRMVRTWRPGGNNNPIQRLIIAIGRRQLLKQITR 290
>gi|332525229|ref|ZP_08401403.1| hypothetical protein RBXJA2T_05373 [Rubrivivax benzoatilyticus
JA2]
gi|332108512|gb|EGJ09736.1| hypothetical protein RBXJA2T_05373 [Rubrivivax benzoatilyticus
JA2]
Length=284
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 129/281 (46%), Positives = 173/281 (62%), Gaps = 6/281 (2%)
Query 19 WSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFE 78
+ YD A RN+G ++P EQQRLR +RVAIAG+GGVGG ++ LAR+G+G+F IAD D FE
Sbjct 2 FDYDAAISRNIGWLTPAEQQRLRGARVAIAGLGGVGGAHLLTLARLGLGRFRIADFDCFE 61
Query 79 IRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVD 138
+ N NRQ GA ST GQ K EVM + DINPEAE+ F + ++N FL+G DV VD
Sbjct 62 VHNFNRQAGAFMSTVGQPKCEVMARMARDINPEAEVVGFERGVDEDNLDAFLDGVDVYVD 121
Query 139 GIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVD 198
ID F ++ RR+L+ RGI A+ A PLG + + F P+GM+F+ YF L D + +
Sbjct 122 AIDFFAVEARRMLFAACHARGIPAVTAAPLGMGVSLLYFSPRGMSFEDYFRL-DGCDRQE 180
Query 199 KFVAFIAGIAPSATHR-RSIDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRV 257
+F FIAG++P+ R + V+ + GPS +AC L +GV VLK+L G G +
Sbjct 181 QFARFIAGLSPAMLQRGYLVHPEAVNFAAQRGPSTIMACELCAGVTGTAVLKLLCGRGEL 240
Query 258 YAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYI 298
AP+ QFDAYR GN +PLQ RLL R+I
Sbjct 241 KPAPWAMQFDAYRQKLSFTWRPGGNANPLQ----RLLLRFI 277
>gi|217970040|ref|YP_002355274.1| hypothetical protein Tmz1t_1623 [Thauera sp. MZ1T]
gi|217507367|gb|ACK54378.1| UBA/THIF-type NAD/FAD binding protein [Thauera sp. MZ1T]
Length=295
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/286 (45%), Positives = 179/286 (63%), Gaps = 2/286 (0%)
Query 19 WSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFE 78
+ YD AF RN+G ++ EQ RLR SR+AIAGMGGVGG+ ++ LAR G+G FTIAD D F+
Sbjct 5 FDYDTAFTRNIGWLTVAEQARLRASRIAIAGMGGVGGVHLLTLARFGVGAFTIADYDRFD 64
Query 79 IRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVD 138
+ N NRQ GA+ ST GQ KAEV+ +V DINPE ++R F + + A FLEG D+ VD
Sbjct 65 LANLNRQAGALMSTLGQPKAEVLARMVRDINPEVDLRCFDDGVDPARADVFLEGVDLYVD 124
Query 139 GIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVD 198
+D F D RR ++ ++RGI A+ A PLG A +VF M+F+ YF + + +
Sbjct 125 ALDFFAFDARRAVFAACRRRGIPAITAAPLGMGAAVMVFTADSMSFEDYFGF-EGCDDDE 183
Query 199 KFVAFIAGIAPSATHRRS-IDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRV 257
+ V F+ G++P R +D + V++ R GPS AC + +GV A E +K+LLG G+V
Sbjct 184 RAVRFLLGLSPGMLQRAYLVDPTRVNLSRREGPSTIAACQICAGVTATETIKLLLGRGKV 243
Query 258 YAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYINRRSA 303
+AP+ +QFDAYR+ R G R+PLQR+ L R + R A
Sbjct 244 LSAPWAYQFDAYRNRLKRTWRPGGWRNPLQRIGLWLGRRQLERMKA 289
>gi|46562213|ref|YP_009074.1| hypothetical protein DVUA0034 [Desulfovibrio vulgaris str. Hildenborough]
gi|46447750|gb|AAS94416.1| conserved domain protein [Desulfovibrio vulgaris str. Hildenborough]
gi|311235413|gb|ADP88266.1| UBA/THIF-type NAD/FAD binding protein [Desulfovibrio vulgaris
RCH1]
Length=989
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 126/277 (46%), Positives = 171/277 (62%), Gaps = 0/277 (0%)
Query 22 DEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFEIRN 81
D AF RNLGL+ Q+RL SRVAIAG+GGVGGI ++ LAR GIG F +AD D + N
Sbjct 312 DIAFSRNLGLVDYAGQRRLLRSRVAIAGLGGVGGIHLMTLARTGIGNFNLADFDAYSPVN 371
Query 82 SNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVDGID 141
NRQYGA ++ G+ K +VM +NP +IR+F E + E FL+ D+LVDGID
Sbjct 372 LNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSFPEGVAAETIDAFLKDVDLLVDGID 431
Query 142 AFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVDKFV 201
F +D+RR L+ A + GI + AGPLG+S A +VF P GM FD YF + D ++ ++
Sbjct 432 FFALDIRRRLFNRALELGIPVITAGPLGYSCALLVFMPGGMNFDSYFGIDDDTPPMEGYL 491
Query 202 AFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRVYAAP 261
F G+AP H +D +V + +R GPS+ +ACHL +G+ A E ++ILL + P
Sbjct 492 RFGMGLAPRPAHLGYMDRRFVSLHDRRGPSLDIACHLCAGMAATEAVRILLHRRGIRPVP 551
Query 262 YFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYI 298
YF QFD +VR RLR G R PLQR+K + R+
Sbjct 552 YFRQFDPLTGRHVRGRLRKGLRSPLQRLKLAIARRFF 588
>gi|120586929|ref|YP_961274.1| hypothetical protein Dvul_3075 [Desulfovibrio vulgaris subsp.
vulgaris DP4]
gi|120564343|gb|ABM30086.1| UBA/THIF-type NAD/FAD binding protein [Desulfovibrio vulgaris
DP4]
Length=989
Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 126/277 (46%), Positives = 171/277 (62%), Gaps = 0/277 (0%)
Query 22 DEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFEIRN 81
D AF RNLGL+ Q+RL SRVAIAG+GGVGGI ++ LAR GIG F +AD D + N
Sbjct 312 DIAFSRNLGLVDYAGQRRLLRSRVAIAGLGGVGGIHLMTLARTGIGNFNLADFDAYSPVN 371
Query 82 SNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVDGID 141
NRQYGA ++ G+ K +VM +NP +IR+F E + E FL+ D+LVDGID
Sbjct 372 LNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSFPEGVTAETIDAFLKDVDLLVDGID 431
Query 142 AFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVDKFV 201
F +D+RR L+ A + GI + AGPLG+S A +VF P GM FD YF + D ++ ++
Sbjct 432 FFALDIRRRLFNRALELGIPVITAGPLGYSCALLVFMPGGMNFDSYFGIDDDTPPMEGYL 491
Query 202 AFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRVYAAP 261
F G+AP H +D +V + +R GPS+ +ACHL +G+ A E ++ILL + P
Sbjct 492 RFGMGLAPRPAHLGYMDRRFVSLHDRRGPSLDIACHLCAGMAATEAVRILLHRRGIRPVP 551
Query 262 YFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYI 298
YF QFD +VR RLR G R PLQR+K + R+
Sbjct 552 YFRQFDPLTGRHVRGRLRKGLRSPLQRLKLAIARRFF 588
>gi|78223253|ref|YP_385000.1| hypothetical protein Gmet_2046 [Geobacter metallireducens GS-15]
gi|78194508|gb|ABB32275.1| UBA/THIF-type NAD/FAD binding fold protein [Geobacter metallireducens
GS-15]
Length=290
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 129/278 (47%), Positives = 180/278 (65%), Gaps = 0/278 (0%)
Query 25 FCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFEIRNSNR 84
F RN+GL++ EQ+RL SRVA+AG GGVGGI ++ LAR+G+G FTIAD D F++ N +R
Sbjct 11 FARNIGLLTVEEQKRLLASRVAVAGAGGVGGIHVLTLARLGVGCFTIADHDSFDVVNISR 70
Query 85 QYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVDGIDAFE 144
Q+GA ST + KA+V+ +V DINP AE+R E + ++N FL+G DV VD ID FE
Sbjct 71 QFGAFHSTLNRNKAQVLAEMVKDINPNAEVRVMEEGVTEDNINAFLDGVDVYVDSIDFFE 130
Query 145 IDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVDKFVAFI 204
ID+RRL++ + +GIYAL A PLGF VFDP+GM+FD YF + D ++K AF
Sbjct 131 IDMRRLIFNSCRAKGIYALTAAPLGFGATLQVFDPEGMSFDDYFGIDDQTPPLEKIAAFA 190
Query 205 AGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRVYAAPYFH 264
AG+ P+ H +D S V + RTGP+V AC LA+ +VA E++KIL G G + P +
Sbjct 191 AGLTPNPYHLSYMDASRVSFKRRTGPAVSPACTLAASLVATEIVKILTGKGELRPIPCYL 250
Query 265 QFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYINRRS 302
QFD + ++ G + P Q+ KRRL+ + +S
Sbjct 251 QFDMLLNKVKMGKIALGAKSPSQKKKRRLIMENLLMKS 288
>gi|224369119|ref|YP_002603283.1| hypothetical protein HRM2_20180 [Desulfobacterium autotrophicum
HRM2]
gi|223691836|gb|ACN15119.1| putative dinucleotide-utilizing biosynthesis family protein (molybdopterin
and thiamine biosynthesis family protein) [Desulfobacterium
autotrophicum HRM2]
Length=679
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 120/297 (41%), Positives = 188/297 (64%), Gaps = 6/297 (2%)
Query 21 YDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFEIR 80
+ +AF RN+GL + EQ+ L ++VAI GMGGVGG ++ + R GIG+F IAD D FE
Sbjct 22 FAQAFSRNIGLFTDQEQKMLAQAKVAIPGMGGVGGGHLITMVRTGIGRFAIADFDRFEPV 81
Query 81 NSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVDGI 140
N NRQ+GA G+ K EVM+ INP E+ F E I + N FL+G DV++DG+
Sbjct 82 NVNRQFGARVPEFGRPKLEVMKKQALSINPFLEMDLFPEGINETNLDRFLDGVDVVLDGL 141
Query 141 DAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVDKF 200
D FE ++RR+L+++A ++GI+ + AGP+G+S+A +VFDP GM FD YF+++ M +K+
Sbjct 142 DFFEFEVRRMLFKKAAEKGIFVITAGPMGYSSAMLVFDPGGMGFDEYFNITKGMQDKEKY 201
Query 201 VAFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRVYAA 260
++F G+AP TH + +D VD++ + GPS+ LAC + SG+ E +KI+L G+V
Sbjct 202 LSFALGLAPRPTHVKYMDFKKVDLDLKAGPSLNLACQICSGMAGTEAVKIILKKGKVRTV 261
Query 261 PYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYINRRSAGVIPGLRYHRTEPS 317
P + Q+D + R L GN++P+Q+VK +++ + R ++++ EP
Sbjct 262 PSYVQYDPFLQKLKRGTLVRGNKNPVQKVKLKVVNYLLERNK------IKFYTPEPE 312
>gi|323698630|ref|ZP_08110542.1| UBA/THIF-type NAD/FAD binding protein [Desulfovibrio sp. ND132]
gi|323458562|gb|EGB14427.1| UBA/THIF-type NAD/FAD binding protein [Desulfovibrio desulfuricans
ND132]
Length=677
Score = 235 bits (599), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 125/289 (44%), Positives = 187/289 (65%), Gaps = 1/289 (0%)
Query 20 SYDEA-FCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFE 78
+Y EA FCRNLGL+ EQ RL+++ VA+AG+GGVGG ++ALAR G+G F +AD D F+
Sbjct 20 TYQEAAFCRNLGLLDANEQNRLQHAVVAVAGLGGVGGGHLIALARSGVGGFRLADFDRFD 79
Query 79 IRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVD 138
N NRQYGA S G+ K VM ++NP + F + + +EN FL+GAD+++D
Sbjct 80 PVNGNRQYGATVSAFGREKLRVMAENALEVNPHLSLTLFEDGVTEENVDAFLDGADLVLD 139
Query 139 GIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVD 198
G+D F ++RR+++++A ++GI + AGP+GFS+A +VF P GM FD YFD+ + ++
Sbjct 140 GLDFFVFEVRRMVFKKALEKGIPVITAGPMGFSSALLVFTPDGMGFDEYFDIREEDTYIE 199
Query 199 KFVAFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRVY 258
+ + F G+AP TH +++ +VD+ + GPS+G AC L + + E L++LLG V
Sbjct 200 RILKFAMGLAPRPTHFGYVNMDFVDLRAKRGPSLGCACQLCASLAVTEALRLLLGRKGVK 259
Query 259 AAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYINRRSAGVIP 307
PYF QFD Y V+ RLR GNRHP+QR+K + Y+ R+ + P
Sbjct 260 PVPYFLQFDPYVRKLVKGRLRMGNRHPVQRLKLWIAKNYMLDRNKVIGP 308
>gi|251771764|gb|EES52339.1| UBA/THIF-type NAD/FAD binding protein [Leptospirillum ferrodiazotrophum]
Length=291
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/270 (46%), Positives = 172/270 (64%), Gaps = 3/270 (1%)
Query 21 YDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFEIR 80
Y+ AF R +G ++ +E LR R+AIAGMGGVGGI ++ L R+GIG F ++DPD F++
Sbjct 7 YETAFSRTIGWVTRSELATLRGKRIAIAGMGGVGGIHLLTLTRLGIGGFALSDPDTFDLV 66
Query 81 NSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVDGI 140
N NRQ GAM ST GQ K E M + DINPE ++R F I +ENA FL G D+ +DG+
Sbjct 67 NFNRQAGAMMSTLGQPKVETMAAMARDINPELDLRIFGA-ITRENAEAFLAGCDLYLDGM 125
Query 141 DAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVDKF 200
D F + R L+ A++ GI A AGPLG TA + F P GM+F+ YF + +K
Sbjct 126 DFFAFEAREALFSAARRLGIPATTAGPLGMGTAALNFLPGGMSFEEYFGW-EGQPEEEKS 184
Query 201 VAFIAGIAPSATH-RRSIDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRVYA 259
+ F+ G++P+ +D + V++ R GPS +AC L +GV A EVLKILLG G V +
Sbjct 185 LRFLLGLSPARLQFTYLVDPTAVNLAERRGPSTPMACQLCAGVAATEVLKILLGRGPVLS 244
Query 260 APYFHQFDAYRSIYVRKRLRCGNRHPLQRV 289
AP+ QFDAYR+ +V+ G+R+PLQ++
Sbjct 245 APWGLQFDAYRNRFVKTWRPGGHRNPLQKI 274
>gi|256830000|ref|YP_003158728.1| UBA/THIF-type NAD/FAD binding protein [Desulfomicrobium baculatum
DSM 4028]
gi|256579176|gb|ACU90312.1| UBA/THIF-type NAD/FAD binding protein [Desulfomicrobium baculatum
DSM 4028]
Length=679
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/269 (45%), Positives = 167/269 (63%), Gaps = 0/269 (0%)
Query 22 DEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFEIRN 81
+ AF RN+GL SP EQ+RL +RVAI GMGGVGG+ ++ L R GIG+F +AD D FE N
Sbjct 23 EAAFSRNIGLFSPGEQERLAEARVAIPGMGGVGGVHLINLVRTGIGRFHLADFDQFEPVN 82
Query 82 SNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVDGID 141
NRQ+GA + G+ K VM H INP +I + + +N FL DV++DG+D
Sbjct 83 VNRQFGAKVPSFGRPKLAVMIEEAHSINPFLDITPYPAGLTADNMEAFLTDVDVVLDGLD 142
Query 142 AFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVDKFV 201
F+ ++RR L+ A+ G+ + AGPLG+S+A +VF P+GM FD YFD+ + K++
Sbjct 143 FFQFEIRRTLFNMARSMGVPVITAGPLGYSSALLVFTPQGMGFDDYFDVGGKLPEEQKYL 202
Query 202 AFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRVYAAP 261
F G+AP TH +DLS VD++ GPS+ +AC L S + A E ++I+LG + AP
Sbjct 203 RFAMGLAPRPTHIGYMDLSRVDLKGGKGPSLNIACQLCSSLAATEAVRIILGKPGLRPAP 262
Query 262 YFHQFDAYRSIYVRKRLRCGNRHPLQRVK 290
F QFD +R + + RL GNR QR K
Sbjct 263 CFLQFDPFRQVLRKGRLSRGNRTFSQRAK 291
>gi|82701508|ref|YP_411074.1| UBA/THIF-type NAD/FAD binding domain-containing protein [Nitrosospira
multiformis ATCC 25196]
gi|82409573|gb|ABB73682.1| UBA/THIF-type NAD/FAD binding fold protein [Nitrosospira multiformis
ATCC 25196]
Length=684
Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 121/291 (42%), Positives = 178/291 (62%), Gaps = 2/291 (0%)
Query 19 WSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFE 78
+SY EA RN+G ++P EQ+ LR R+AIAG+GGVGGI ++ LAR+GIG F IAD DVF+
Sbjct 5 FSYREATSRNIGWVTPVEQEILRYKRIAIAGLGGVGGIHLLTLARLGIGAFHIADFDVFD 64
Query 79 IRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVD 138
+ N NRQ GA S+ + K+EV+ + DINPE I+ F + +N F E D+ +D
Sbjct 65 LVNFNRQVGATVSSLNRPKSEVLAAMARDINPELNIKIFPRGVNPDNLPEFFEDVDLYID 124
Query 139 GIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVD 198
G+D F R + + ++RGI A+ A PLG +A + F P MTF+ YF D + V+
Sbjct 125 GLDFFAFSARAVTFSACEERGIPAITAAPLGMGSALLNFLPGKMTFEEYFQWGD-LPEVE 183
Query 199 KFVAFIAGIAPSATHRRS-IDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRV 257
K + F+ G+AP+ H R +D S ++++ R GPS + C L +G+ A E LKILL G V
Sbjct 184 KALRFLIGLAPTGLHARYLLDPSSINLKERRGPSTIMGCQLCAGIAATEALKILLNRGTV 243
Query 258 YAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYINRRSAGVIPG 308
AAP+ FDAYR+ +R GN +PLQ+ + R +++++ + G
Sbjct 244 LAAPHGVHFDAYRNKLIRTWRPGGNSNPLQQFSLAIARRRLSKKNTNKLFG 294
>gi|88799463|ref|ZP_01115040.1| hypothetical protein MED297_03742 [Reinekea sp. MED297]
gi|88777773|gb|EAR08971.1| hypothetical protein MED297_03742 [Reinekea sp. MED297]
Length=298
Score = 231 bits (590), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 115/279 (42%), Positives = 174/279 (63%), Gaps = 1/279 (0%)
Query 19 WSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFE 78
+S D+AF RN GLIS EQQRL V I G GG+G LAR+G+G+F + DPD F+
Sbjct 3 FSTDKAFSRNRGLISDHEQQRLLTQLVVIPGCGGIGSTVAETLARLGVGRFRLCDPDTFD 62
Query 79 IRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVD 138
+ N NRQ GA +T GQ KAE + + INPEA+I +P+ ++NA+ F+ GA +++D
Sbjct 63 VANFNRQLGATLTTVGQNKAEAVAERIWQINPEAQIEIVNQPVSRDNASDFVAGASLVLD 122
Query 139 GIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDP-KGMTFDRYFDLSDAMNTV 197
G+D F + RR L++ A GI A+ A PLGFS VF P +G++FDR++D ++
Sbjct 123 GLDFFALTARRALFKAASDTGIPAMTAAPLGFSGTLQVFLPDRGLSFDRFYDFRAEDSSA 182
Query 198 DKFVAFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRV 257
++ + F+ G++P+ HR +D S V I+++ GPS L +A+ ++ + L++LL V
Sbjct 183 EQVIKFLVGLSPAGLHRPYMDFSRVSIQDKNGPSSILGTQMAASLIGGQALQLLLNRQAV 242
Query 258 YAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLAR 296
+AP+ Q D YR VR+ + GNR PLQ++K L+ R
Sbjct 243 RSAPWCLQMDVYRQKAVRRFVPGGNRFPLQKLKIALVRR 281
>gi|22535384|gb|AAM97302.1| FeeI [uncultured bacterium]
Length=308
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/283 (43%), Positives = 166/283 (59%), Gaps = 2/283 (0%)
Query 19 WSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFE 78
WSY EAF RN GLI Q LR + +AIAG+GGVGG+ LAR+GIG F+IAD DVFE
Sbjct 27 WSYREAFVRNRGLIPDGHQDILREAHIAIAGLGGVGGVYATTLARLGIGNFSIADSDVFE 86
Query 79 IRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVD 138
+ N NRQ GA T GQ KA+++ N++ DINP A + F I +N FLEG DVL+D
Sbjct 87 LVNMNRQAGATTKTLGQEKAKIIENMILDINPSARVTRF-PAITSDNVGAFLEGVDVLID 145
Query 139 GIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVD 198
GID F I+ RRLL++EA+ R I + P+GF + + F P+ M+FD YF + D+M+ +
Sbjct 146 GIDFFSIEARRLLFKEARARRIPTITCAPIGFGASLLTFAPETMSFDTYFRIDDSMSRHE 205
Query 199 KFVAFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRVY 258
+ ++F G++P HR D+ PS +A + +V +V KI L
Sbjct 206 QLLSFALGLSPLLIHRSYFKPKSFDLHGEVAPSSVIATMACANLVTTQVYKI-LNSLEYD 264
Query 259 AAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYINRR 301
AP QFD Y + R L GNR+PLQ +K+ R +N +
Sbjct 265 TAPLSAQFDPYVQQFQRFTLWGGNRNPLQLLKKWYFKRILNLK 307
>gi|56479527|ref|YP_161116.1| hypothetical protein ebA7215 [Aromatoleum aromaticum EbN1]
gi|56315570|emb|CAI10215.1| similar to MoeB and ThiF [Aromatoleum aromaticum EbN1]
Length=294
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 129/287 (45%), Positives = 176/287 (62%), Gaps = 3/287 (1%)
Query 19 WSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFE 78
+ YD AF RNLG ++ EQ +LR R+AIAGMGGVGG+ + LAR+GIG F IAD D F+
Sbjct 4 FDYDAAFVRNLGWVTALEQAQLRRKRIAIAGMGGVGGVHLTTLARLGIGAFNIADFDSFD 63
Query 79 IRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVD 138
+ N NRQ GA S+ G+ K +V+ + DINPE +IR F + + N FL+G D+ VD
Sbjct 64 LANFNRQAGATMSSLGRPKVDVLAELALDINPELDIRRFPKGVSDANLDKFLDGVDLYVD 123
Query 139 GIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVD 198
G+D F RR + + GI A+ A PLG TA + F P GM+F+ YF L + + +
Sbjct 124 GLDFFSFAARRATFAACHRLGIPAVTAAPLGMGTAVLTFIPDGMSFEEYFCL-EGCDEEE 182
Query 199 KFVAFIAGIAPSATHRRSI-DLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRV 257
+ F+ G++P R + D S VD+ + GPS AC L +GV A E LK+LLG G+V
Sbjct 183 MAIRFLLGLSPGMLQRGYLADPSRVDLSEQRGPSTIAACQLCAGVTATEALKLLLGRGKV 242
Query 258 YAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYINRRSAG 304
AAP +QFDAYR+ +++ GNR+PLQR+ LAR RR G
Sbjct 243 LAAPRGYQFDAYRNSFIKTWRPGGNRNPLQRLG-LWLARKQLRRMKG 288
>gi|289209662|ref|YP_003461728.1| UBA/THIF-type NAD/FAD binding protein [Thioalkalivibrio sp. K90mix]
gi|288945293|gb|ADC72992.1| UBA/THIF-type NAD/FAD binding protein [Thioalkalivibrio sp. K90mix]
Length=292
Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 124/272 (46%), Positives = 167/272 (62%), Gaps = 1/272 (0%)
Query 19 WSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFE 78
+ Y AF R G ++ E +RLR +RVAIAG+GGVGG ++ LAR+G+G+F IAD D FE
Sbjct 4 FDYHAAFRRTHGWVTWPELERLRGARVAIAGLGGVGGSHLLTLARLGVGRFHIADFDCFE 63
Query 79 IRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVD 138
+ N NRQ GA S G+ K EV+R + DINPE EI F E + + N FL+G D+ VD
Sbjct 64 LHNMNRQAGAGMSRLGRPKVEVLREMALDINPELEITTFPEGVHQHNLEAFLQGVDLYVD 123
Query 139 GIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVD 198
G+D F RR ++ +RGI A+ PLG A + F P G++FD YFDL D + +
Sbjct 124 GLDFFVFQARREVFAVCAERGIPAITVAPLGMGAALLNFRPGGVSFDDYFDLRDGLPDEE 183
Query 199 KFVAFIAGIAPSATHRRSI-DLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRV 257
+ F+ G+APS + D + VD++ + GPS +AC L +GV+ E LKILLG GRV
Sbjct 184 LALRFMMGLAPSMMQMGYLADPAAVDLKAQHGPSTVMACELCAGVMGTEALKILLGRGRV 243
Query 258 YAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRV 289
AP+ FDAYR R GNR+PLQR+
Sbjct 244 VWAPHGVHFDAYRQRLARTWRPGGNRNPLQRL 275
>gi|333984838|ref|YP_004514048.1| UBA/THIF-type NAD/FAD binding protein [Methylomonas methanica
MC09]
gi|333808879|gb|AEG01549.1| UBA/THIF-type NAD/FAD binding protein [Methylomonas methanica
MC09]
Length=289
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/284 (42%), Positives = 171/284 (61%), Gaps = 2/284 (0%)
Query 19 WSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFE 78
++YD AF RN+G ++ TEQ LR+ ++AIAG+GGVGG ++ L R+GIGKF I+D D+FE
Sbjct 5 FNYDLAFSRNIGWVTETEQTLLRDKKIAIAGLGGVGGSHLITLTRLGIGKFHISDLDIFE 64
Query 79 IRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVD 138
+ N NRQ GA S + K EVM+ + DINPE EI F + EN FL+G D+ VD
Sbjct 65 LANFNRQAGASISHLEKPKVEVMKQLALDINPELEISTFPAGVHDENIDAFLDGVDLYVD 124
Query 139 GIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVD 198
G+D F + RR+++ +R I A+ A PLG +++ F P MTF+ YF T +
Sbjct 125 GLDFFALTARRIVFAACAERNIPAITAAPLGMGVSFLCFMPGKMTFEEYFQWEGQTET-E 183
Query 199 KFVAFIAGIAPSATHRRSI-DLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRV 257
+ + F+ G++P+A + D S +DI N GPS +AC L +G+V LKILL G +
Sbjct 184 QLLRFLVGLSPTALQMTYLADDSRLDIANHKGPSTPMACDLCAGMVGTYALKILLNRGEI 243
Query 258 YAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYINRR 301
AAP FDAY++ V GN +PLQ++ +L R I +
Sbjct 244 VAAPKAVHFDAYKNKCVITWRPGGNSNPLQQLGLLMLRRKIQAK 287
>gi|183238965|gb|ACC61053.1| NAD/FAD-binding protein [uncultured bacterium]
Length=319
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 120/287 (42%), Positives = 175/287 (61%), Gaps = 6/287 (2%)
Query 19 WSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFE 78
+SY EAF RN+G ++ EQQ LR R+AIAG+GGVG ++ +AR+G+G F IAD D F+
Sbjct 5 FSYSEAFSRNIGWVTRAEQQDLRGKRIAIAGLGGVGSSHLLTMARLGVGAFHIADFDDFD 64
Query 79 IRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVD 138
I N NRQ GA S+ G+ KAEVM + +INPE +I+ F + ++N FL+G D+ +D
Sbjct 65 IHNFNRQVGATMSSIGRPKAEVMAEMAREINPELDIKVFPHGVTQDNVREFLDGVDLYID 124
Query 139 GIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVD 198
+D F R++ + + GI A A PLG + + F P MTF+ YF D + +
Sbjct 125 SLDFFVFAARQMTFAACAELGIPATTAAPLGMGSGMLNFMPGKMTFEEYFQWGD-LPESE 183
Query 199 KFVAFIAGIAPSATHRRS-IDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRV 257
K + F+ G+AP+ HRR +D + V++ R GPS +A L +G+ AA+ LKILL G+V
Sbjct 184 KAIRFLVGLAPAGLHRRYLVDPTAVNLAERRGPSTFIAVQLCAGLAAAQALKILLKRGKV 243
Query 258 YAAPYFHQFDAYRSIYVRKRLRCGNRHPLQR----VKRRLLARYINR 300
AAP+ QFD YR V GNR+P+QR + RR +A+ + +
Sbjct 244 VAAPHGLQFDGYRDKLVHTWRPGGNRNPIQRLAIMIGRRQMAKLLRQ 290
>gi|257094485|ref|YP_003168126.1| hypothetical protein CAP2UW1_2918 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047009|gb|ACV36197.1| UBA/THIF-type NAD/FAD binding protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length=298
Score = 225 bits (573), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 134/299 (45%), Positives = 188/299 (63%), Gaps = 5/299 (1%)
Query 19 WSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFE 78
+ Y EAF RN+G ++ +EQQ+LR SRVAI G+GGVGG+ ++ LAR+GIG+F+IAD DVFE
Sbjct 4 FDYHEAFSRNVGWVTESEQQKLRQSRVAIGGLGGVGGVHLLTLARLGIGRFSIADFDVFE 63
Query 79 IRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVD 138
N NRQ GA T G+ K +VM ++ +INPE ++RAF + I ++ FL+G DV VD
Sbjct 64 TANFNRQIGAGVDTLGRPKIDVMGQMLRNINPEVDLRAFADGIQADSIDAFLDGVDVYVD 123
Query 139 GIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVD 198
G+D F RR+ + +++GI + A PLG TA VVF P GM+F+ YF D + ++
Sbjct 124 GLDFFAFGARRMTFAACERKGIPVVTAAPLGLGTALVVFGPGGMSFEDYFGWDDG-DELE 182
Query 199 KFVAFIAGIAPSATHRRSI-DLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRV 257
V F+ G++P+ R + D + +++ R GPS AC L +GV A +VLK+LLG G V
Sbjct 183 MSVRFLVGLSPAMLQRGYVADSTRINLAERRGPSSMAACQLCAGVTAVDVLKLLLGRGGV 242
Query 258 YAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYINRRSAGVIPGLRYHRTEP 316
AP+ QFDAYR VR G R+PLQR+ L+ +N A P R+H EP
Sbjct 243 RLAPWASQFDAYRMRLVRTWRPLGYRNPLQRLMIMLVKAQLN-GMAKTPPSGRHH--EP 298
>gi|71908015|ref|YP_285602.1| hypothetical protein Daro_2396 [Dechloromonas aromatica RCB]
gi|71847636|gb|AAZ47132.1| UBA/THIF-type NAD/FAD binding fold protein [Dechloromonas aromatica
RCB]
Length=290
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 126/288 (44%), Positives = 179/288 (63%), Gaps = 2/288 (0%)
Query 19 WSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFE 78
+ Y+ AF RN+G ++ EQ RLRN RVAIAG+GGVGG+ ++ LAR+GIGKF +AD D F+
Sbjct 4 FDYNTAFSRNIGWVTEDEQARLRNCRVAIAGLGGVGGVHLLTLARLGIGKFNVADFDKFD 63
Query 79 IRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVD 138
N NRQ GA S+ + K +V+ + DINPE E+R F + I +N FL+G DV VD
Sbjct 64 FVNFNRQVGATMSSIDRPKIDVLEEMARDINPELELRLFPDGISTKNLDEFLDGVDVYVD 123
Query 139 GIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVD 198
G+D F D+RR + Q +GI + A PLG TA +VF P GM+ + YF + + ++
Sbjct 124 GLDFFVFDIRRKTFAACQAKGIPVVTAAPLGLGTAVLVFSPTGMSSEDYFGF-EGCDELE 182
Query 199 KFVAFIAGIAPSATHRRSI-DLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRV 257
+ F+ G++P+ R + D+S + + R GPS +C L +GV A E LK+LLG G +
Sbjct 183 MAIRFLVGLSPAVLQRGYVADMSRISLPERRGPSSIASCQLCAGVAAVETLKLLLGRGEI 242
Query 258 YAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYINRRSAGV 305
AP+ QFDAYR YVR G R+PLQR+ R LL + + + S +
Sbjct 243 RYAPWGSQFDAYRMKYVRTWRPGGYRNPLQRLMRFLLRKQLEKISKSM 290
>gi|344342660|ref|ZP_08773531.1| UBA/THIF-type NAD/FAD binding protein [Marichromatium purpuratum
984]
gi|343805996|gb|EGV23891.1| UBA/THIF-type NAD/FAD binding protein [Marichromatium purpuratum
984]
Length=292
Score = 222 bits (566), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 118/272 (44%), Positives = 166/272 (62%), Gaps = 2/272 (0%)
Query 19 WSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFE 78
+ ++ AF RN+G ++ EQQ LR RVAIAG+GGVGG ++ L R+G+G F I+D D F
Sbjct 6 FEFETAFSRNIGWLTQQEQQDLRQRRVAIAGLGGVGGSHLMTLTRLGLGAFNISDFDTFG 65
Query 79 IRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVD 138
+ N NRQ GA + + K EV+ + D+NPE EIRAF E I +N FLEG DV VD
Sbjct 66 LVNFNRQAGASLRSIDRPKIEVVSEMARDVNPELEIRAFPEGIKADNVDAFLEGVDVYVD 125
Query 139 GIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVD 198
G+D F ++ RRL++ ++ I A+ A PLG A +VF P GM F+ YF L + + +
Sbjct 126 GLDYFAVEARRLVFAACARKSIPAVTAAPLGMGAAVLVFVPGGMGFEDYFQL-EGYSEDE 184
Query 199 KFVAFIAGIAPSATHRRS-IDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRV 257
+ + F+ G++P+ R + VD + GPS +AC L +G+ A +VLK+L G GRV
Sbjct 185 QLIRFLLGLSPAMLQRSYLVAPEAVDFDRHLGPSTPMACELCAGIAATQVLKLLTGRGRV 244
Query 258 YAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRV 289
AAP FDAYR+ GNR+PLQR+
Sbjct 245 IAAPRALHFDAYRNKLSITWRPGGNRNPLQRI 276
>gi|78355869|ref|YP_387318.1| hypothetical protein Dde_0822 [Desulfovibrio alaskensis G20]
Length=1006
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/272 (47%), Positives = 174/272 (64%), Gaps = 0/272 (0%)
Query 22 DEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFEIRN 81
D AFCRNLGL++ EQ++L +SRVA+AG+GGVGG +V LAR G GKFTIA+ D F N
Sbjct 357 DTAFCRNLGLLTYDEQRKLLDSRVAVAGLGGVGGEHLVTLARTGFGKFTIAEFDEFSPVN 416
Query 82 SNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVDGID 141
NRQYGA S G+AK +VM +NP +IR F I +EN FL+G DV+VDGID
Sbjct 417 VNRQYGATVSAFGRAKLDVMLEYAMGVNPFLDIRKFPSGISEENLDDFLDGVDVVVDGID 476
Query 142 AFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVDKFV 201
F D+R L+ A ++GI + AGP+G+S A +VF P GM F +YFD+ D M+ +K +
Sbjct 477 FFAFDIRCALFMRAYKKGIPVITAGPMGYSCALLVFMPGGMDFIKYFDIRDDMDMQEKLL 536
Query 202 AFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRVYAAP 261
F G+AP A H R +D +VD+ R GPS+ +AC + +G+ E ++++LG V A P
Sbjct 537 RFALGLAPRALHVRYLDRRFVDMRERRGPSLDIACRVCAGMATTEAVRLVLGKKGVRAVP 596
Query 262 YFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRL 293
+ QFD + Y R +L+ G Q++K RL
Sbjct 597 EYTQFDPFTGKYHRGKLKKGLASFPQKLKLRL 628
>gi|342906343|gb|ABB37623.2| UBA/THIF-type NAD/FAD binding protein [Desulfovibrio alaskensis
G20]
Length=965
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/272 (47%), Positives = 174/272 (64%), Gaps = 0/272 (0%)
Query 22 DEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFEIRN 81
D AFCRNLGL++ EQ++L +SRVA+AG+GGVGG +V LAR G GKFTIA+ D F N
Sbjct 316 DTAFCRNLGLLTYDEQRKLLDSRVAVAGLGGVGGEHLVTLARTGFGKFTIAEFDEFSPVN 375
Query 82 SNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVDGID 141
NRQYGA S G+AK +VM +NP +IR F I +EN FL+G DV+VDGID
Sbjct 376 VNRQYGATVSAFGRAKLDVMLEYAMGVNPFLDIRKFPSGISEENLDDFLDGVDVVVDGID 435
Query 142 AFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVDKFV 201
F D+R L+ A ++GI + AGP+G+S A +VF P GM F +YFD+ D M+ +K +
Sbjct 436 FFAFDIRCALFMRAYKKGIPVITAGPMGYSCALLVFMPGGMDFIKYFDIRDDMDMQEKLL 495
Query 202 AFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRVYAAP 261
F G+AP A H R +D +VD+ R GPS+ +AC + +G+ E ++++LG V A P
Sbjct 496 RFALGLAPRALHVRYLDRRFVDMRERRGPSLDIACRVCAGMATTEAVRLVLGKKGVRAVP 555
Query 262 YFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRL 293
+ QFD + Y R +L+ G Q++K RL
Sbjct 556 EYTQFDPFTGKYHRGKLKKGLASFPQKLKLRL 587
>gi|333983030|ref|YP_004512240.1| UBA/THIF-type NAD/FAD binding protein [Methylomonas methanica
MC09]
gi|333807071|gb|AEF99740.1| UBA/THIF-type NAD/FAD binding protein [Methylomonas methanica
MC09]
Length=285
Score = 218 bits (555), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 165/280 (59%), Gaps = 0/280 (0%)
Query 19 WSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFE 78
+ YD AF RN G+ + EQ RL+N+ AIAGMGGVGG ++ LAR GIG F I+D D FE
Sbjct 4 FDYDLAFSRNNGITNAEEQSRLKNATFAIAGMGGVGGDYLITLARAGIGNFKISDFDDFE 63
Query 79 IRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVD 138
+ N NRQYGA S+ G+ K +VMR + DINP+A+I+ + + I N FL+G DV +D
Sbjct 64 MGNFNRQYGATMSSIGRKKMDVMRELAIDINPDAQIKTYGDGINPNNIEDFLQGVDVFID 123
Query 139 GIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVD 198
++ FEI+ +L+ +RGI A+ PLGF +++ KG++FD YFDL
Sbjct 124 AVEFFEIEAHKLMIDACMERGIPAIFGVPLGFGVGVLIYTSKGISFDDYFDLDYTAPLEH 183
Query 199 KFVAFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRVY 258
+ + G AP+ H + +D S VD+ NR PS+ C LA+G+V + + LL +
Sbjct 184 QVLKMSLGCAPAGFHLKYVDPSSVDLANRKAPSIASGCKLATGIVITQAIVALLHPNELK 243
Query 259 AAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYI 298
P + +DA + + L GN++P+QR+K L R +
Sbjct 244 PLPRYTCYDARSNRLKKGYLWLGNKNPIQRLKFFLAKRML 283
>gi|88812577|ref|ZP_01127825.1| UBA/THIF-type NAD/FAD binding fold protein [Nitrococcus mobilis
Nb-231]
gi|88790171|gb|EAR21290.1| UBA/THIF-type NAD/FAD binding fold protein [Nitrococcus mobilis
Nb-231]
Length=672
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/270 (43%), Positives = 162/270 (60%), Gaps = 2/270 (0%)
Query 21 YDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFEIR 80
Y AF R +G ++ EQ LR+ RVAIAG+GGVGG ++ L R+GIG FT+A+ D FE+
Sbjct 12 YQLAFSRTVGWVTREEQAILRSKRVAIAGLGGVGGSHLLTLTRLGIGAFTLAEMDHFELE 71
Query 81 NSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVDGI 140
N NRQ GA ST G+ K +V+ + INPE IR F E I EN FL D+ VD +
Sbjct 72 NFNRQAGAFLSTVGRPKLDVLSGMAQGINPELNIRTFPEGISGENLDDFLANVDLYVDSL 131
Query 141 DAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVDKF 200
D FE+D+RR ++ + GI A+ PLG TA + F P GMTF++YF L + +++
Sbjct 132 DFFELDIRRKVFAACAEHGIPAITTAPLGMGTAVLAFLPGGMTFEQYFRL-EGHPPEEQY 190
Query 201 VAFIAGIAPSATHR-RSIDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRVYA 259
+ F+ G++P+ ++ S VD+ GPS +AC L +G+ E LKILL GRV
Sbjct 191 LRFLLGLSPARLQMGYLVEPSAVDLAAHRGPSTPMACALCAGIAGTEALKILLRRGRVIM 250
Query 260 APYFHQFDAYRSIYVRKRLRCGNRHPLQRV 289
AP+ + FDAYR R GNR+P+Q+
Sbjct 251 APHGYHFDAYRQRLARTWRPLGNRNPIQQT 280
>gi|218885796|ref|YP_002435117.1| hypothetical protein DvMF_0692 [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218756750|gb|ACL07649.1| UBA/THIF-type NAD/FAD binding protein [Desulfovibrio vulgaris
str. 'Miyazaki F']
Length=968
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 120/277 (44%), Positives = 170/277 (62%), Gaps = 0/277 (0%)
Query 22 DEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFEIRN 81
D AFCRNLGL+ Q++L SRVAIAG+GGVGG+ ++ LAR GIG F +AD D + N
Sbjct 312 DVAFCRNLGLVDYAGQRKLLGSRVAIAGLGGVGGVHLMTLARTGIGNFNLADFDAYSPVN 371
Query 82 SNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVDGID 141
NRQYGA ++ G+ K +VM +NP +IRAF I + FL+ D++VDGID
Sbjct 372 INRQYGASIASFGRNKLDVMTERALSVNPFMDIRAFPGGISATSLDDFLKDVDLVVDGID 431
Query 142 AFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVDKFV 201
F +D+RR L+ A GI + A PLGFS A +VF P M+FD YFD+++ ++ ++
Sbjct 432 FFALDIRRQLFNRALALGIPVITAAPLGFSCALLVFTPGAMSFDDYFDITEHTEKMEGYL 491
Query 202 AFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRVYAAP 261
F G+AP H +D +V + +R GPS+ +ACH+ +G+ E +++LLG V AP
Sbjct 492 RFGMGLAPRPAHLGYMDRRFVSLHDRRGPSLDIACHICAGMAGTEAVRLLLGKKGVRPAP 551
Query 262 YFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYI 298
YF QFD + +LR G R PLQR+K + R+
Sbjct 552 YFRQFDPLTGRFTTGKLRRGLRSPLQRLKLAIARRFF 588
>gi|337286752|ref|YP_004626225.1| UBA/THIF-type NAD/FAD binding protein [Thermodesulfatator indicus
DSM 15286]
gi|335359580|gb|AEH45261.1| UBA/THIF-type NAD/FAD binding protein [Thermodesulfatator indicus
DSM 15286]
Length=306
Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 109/269 (41%), Positives = 162/269 (61%), Gaps = 1/269 (0%)
Query 21 YDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFEIR 80
++E F GL S +Q++LR + VAIAG+GGVGG +V+L R G+G+F +A+ DVFE R
Sbjct 26 FEEVFKPQRGLFSEEDQKKLRQATVAIAGLGGVGGTHLVSLIRTGVGRFKLAEFDVFEPR 85
Query 81 NSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVDGI 140
N +RQYGA T G+ K EVM +NP +I + E I EN FL+G DV++DG+
Sbjct 86 NISRQYGARVDTLGRPKGEVMLEEAFRLNPFLQIEYYKEGITPENIDAFLDGVDVVLDGV 145
Query 141 DAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDP-KGMTFDRYFDLSDAMNTVDK 199
+ F ++ R+LLY A+ + I + AGPLGFS + ++FDP K +FD YF + M+ V+K
Sbjct 146 EFFAVEARKLLYDTARAKKIPLITAGPLGFSASLLIFDPEKSPSFDEYFAIKPDMSPVEK 205
Query 200 FVAFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRVYA 259
+ F G+AP R ID ++++ GP+ +AC+L S + A E ++I+LG +
Sbjct 206 AILFALGLAPKPIFLRYIDFKSLNLKAGQGPASVIACYLCSALAAMEAVRIILGRPGLKP 265
Query 260 APYFHQFDAYRSIYVRKRLRCGNRHPLQR 288
P++ Q D Y L+ GNR QR
Sbjct 266 VPHYLQIDLYLRKLYEGYLKKGNRSATQR 294
>gi|333892213|ref|YP_004466088.1| hypothetical protein ambt_03680 [Alteromonas sp. SN2]
gi|332992231|gb|AEF02286.1| hypothetical protein ambt_03680 [Alteromonas sp. SN2]
Length=284
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/265 (40%), Positives = 155/265 (59%), Gaps = 1/265 (0%)
Query 19 WSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFE 78
+ Y +AF RN+G ++ +EQ ++ +VAIAG GGVG V LAR+GI +F+++D D FE
Sbjct 2 FDYSKAFSRNIGWLTESEQHVIKTKKVAIAGAGGVGFEHAVTLARLGIERFSVSDFDTFE 61
Query 79 IRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVD 138
I N NRQ GA ST + K +V+ ++ DINP I F + + +N A FL D+ +D
Sbjct 62 IHNMNRQAGAFASTLDEPKVQVLERVLKDINPNCAIDVFPDGVHPDNVAEFLSDVDIYID 121
Query 139 GIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVD 198
+D F ID+RR ++ Q+ I A+ A PLG T+ + F + M+FD YFD+ D+ +
Sbjct 122 SLDFFVIDIRRQVFSYCQKNRIPAITAAPLGMGTSVICFTAESMSFDNYFDIIDSDEENE 181
Query 199 KFVAFIAGIAPSATHRRSIDL-SYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRV 257
K + F+ G++P R + + + + + GPS +A L +GV A LKILL G V
Sbjct 182 KCLKFLVGLSPKMLQRDYLVVPDAANFKEKRGPSTPMAVKLCAGVAATNALKILLNRGEV 241
Query 258 YAAPYFHQFDAYRSIYVRKRLRCGN 282
+AP FDAYR+ + LR GN
Sbjct 242 LSAPKGIHFDAYRNKFKVTNLRYGN 266
>gi|74316209|ref|YP_313949.1| hypothetical protein Tbd_0191 [Thiobacillus denitrificans ATCC
25259]
gi|74055704|gb|AAZ96144.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
25259]
Length=291
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/284 (45%), Positives = 163/284 (58%), Gaps = 6/284 (2%)
Query 19 WSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFE 78
+ YDEAF RNLG ++P EQ+ LR ++AIAG+GG GG+ ++ LAR+GIG+F +AD D F
Sbjct 6 FDYDEAFSRNLGWLTPDEQRTLRGKKIAIAGLGGAGGVHLLTLARLGIGRFHLADLDRFA 65
Query 79 IRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVD 138
+ N NRQ GA + G+ K EVM + DINPE +I F E + N FL+G D+ VD
Sbjct 66 LVNFNRQAGAGMGSIGEPKVEVMARLARDINPELDIATFDEGVQPHNVDAFLDGVDLYVD 125
Query 139 GIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVD 198
G+D F RRL+Y + RGI A PLG A + F P G +FD YF L D +
Sbjct 126 GLDYFVFPARRLVYDACRARGIPITFAVPLGMGAAVLNFLPGGPSFDDYFQL-DGTPEEE 184
Query 199 KFVAFIAGIAPSATHRRSIDL-SYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRV 257
V F+ G+AP+ HR + VD + PS GLAC L +G+ E LKILLG G V
Sbjct 185 WPVRFLVGLAPALQHRSYLVYPQIVDFSIQRVPSTGLACQLCAGMAGTEALKILLGRGPV 244
Query 258 YAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYINRR 301
P+ QFDAY V GNRHPL RL Y+N R
Sbjct 245 KGVPHSMQFDAYTGKRVATWRPGGNRHPLN----RLAIGYVNWR 284
>gi|290973313|ref|XP_002669393.1| predicted protein [Naegleria gruberi]
gi|284082940|gb|EFC36649.1| predicted protein [Naegleria gruberi]
Length=338
Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 113/294 (39%), Positives = 169/294 (58%), Gaps = 0/294 (0%)
Query 7 APDSGRVKESAPWSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGI 66
+ D V P++ EAFCRN+GL+S EQ ++ + VAIAG GG GG ALAR G+
Sbjct 22 SSDVATVGLDRPYTTAEAFCRNIGLVSKEEQAKIERTCVAIAGCGGAGGGYASALARTGV 81
Query 67 GKFTIADPDVFEIRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENA 126
F AD D +E+ N NRQYGA ++ G+ KA V IV INP A+ +AF I + N
Sbjct 82 SNFKFADFDHYELVNFNRQYGATVNSIGRNKAIVTSEIVLAINPLAKTKAFTNGIDESNI 141
Query 127 ATFLEGADVLVDGIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDR 186
FL+G +V++D +D F RRLLY+ A ++GI AGP+G+S AW ++ P G TFD
Sbjct 142 DDFLDGVNVVMDALDLFAPRTRRLLYKHAHKKGIAVFTAGPIGYSCAWQIYLPTGPTFDD 201
Query 187 YFDLSDAMNTVDKFVAFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLASGVVAAE 246
+ ++D+M+ D V + AP+ TH + + VD+ PS+G C + G++ E
Sbjct 202 FCCMNDSMSDEDLIVRHLITAAPAGTHLKYMKAKNVDLSGHAAPSLGPVCTMLHGILVIE 261
Query 247 VLKILLGHGRVYAAPYFHQFDAYRSIYVRKRLRCGNRHPLQRVKRRLLARYINR 300
V+ + G + P++ QFD + + LR GNR+P+Q++K L R + +
Sbjct 262 VINFVTGKKPIKGVPHYFQFDMMTNQFKTGYLRWGNRNPIQKLKIWYLNRLLEK 315
>gi|149911231|ref|ZP_01899854.1| Dinucleotide-utilizing enzyme involved in molybdopterin andthiamine
biosynthesis family 1 [Moritella sp. PE36]
gi|149805685|gb|EDM65684.1| Dinucleotide-utilizing enzyme involved in molybdopterin andthiamine
biosynthesis family 1 [Moritella sp. PE36]
Length=267
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/256 (36%), Positives = 141/256 (56%), Gaps = 5/256 (1%)
Query 29 LGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFEIRNSNRQYGA 88
LG++S E L+N ++A+ G GGVG L RMG+G IAD D F N NRQ+G
Sbjct 2 LGIVSEEELSILKNKKIAVPGAGGVGFTHAETLVRMGVGAVNIADFDTFGPENMNRQFGC 61
Query 89 MRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVDGIDAFEIDLR 148
ST G+ KA+V+ V DINP + + F + + EN FL+G D++ D +D F I+ R
Sbjct 62 TLSTIGKEKAKVLDERVKDINPSIKTKVF-DGVSIENVDAFLDGVDLVCDAMDYFVIEPR 120
Query 149 RLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVDKFVAFIAGIA 208
++Y+ A++ GI + +GP+GF + VFDP+GM F+ +FDL+ T +K + F G+
Sbjct 121 IIMYKRARELGIPVIVSGPVGFGASLHVFDPEGMPFEEFFDLNPEDTTEEKLMKFGMGLT 180
Query 209 PSATHRRSIDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRVYAAPYFHQFD- 267
PS + D + +D + + S+ +C LAS + + + LLG + PY +Q D
Sbjct 181 PSELYLDYQDSANLDFKAQKVASISSSCLLASTLTGSASILQLLGKQSFKSVPYCYQLDL 240
Query 268 ---AYRSIYVRKRLRC 280
+ + V + C
Sbjct 241 RAFKFEEVLVEGGVAC 256
>gi|301385898|ref|ZP_07234316.1| hypothetical protein PsyrptM_24823 [Pseudomonas syringae pv.
tomato Max13]
gi|302059244|ref|ZP_07250785.1| hypothetical protein PsyrptK_04582 [Pseudomonas syringae pv.
tomato K40]
gi|302130862|ref|ZP_07256852.1| hypothetical protein PsyrptN_05672 [Pseudomonas syringae pv.
tomato NCPPB 1108]
Length=267
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/266 (32%), Positives = 137/266 (52%), Gaps = 2/266 (0%)
Query 13 VKESAPWSYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIA 72
+++ +S D F R +GL+S E L R+A+ G GG G L RMG+G IA
Sbjct 1 MQQPNDFSRDVLFSRMIGLVSQQELDILAGKRIAVPGCGGTGYTYAECLVRMGVGGVNIA 60
Query 73 DPDVFEIRNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEG 132
D D F N NRQ+G +T G+ K+EV+ + INP+ ++A + + + N + +L
Sbjct 61 DADTFGPENMNRQFGCSTNTIGRKKSEVLSERLLSINPQVSVKAI-DYLDEFNVSDYLTD 119
Query 133 ADVLVDGIDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSD 192
DV+ D +D F I R LLY+EA++R I + P+ + VF P TF+ +FD+SD
Sbjct 120 VDVVCDTLDFFVIKPRLLLYKEARRRNIPVVLCCPVAYGVTVHVFLPNSPTFEEFFDISD 179
Query 193 AMNTVDKFVAFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILL 252
++ F +APS +++ ID +D E + S+ C +A+ + +LL
Sbjct 180 QDTELESLKKFGGKLAPSKLYKQYIDSPKLDFEKQKVSSLSATCLMATSFGSMIAHMLLL 239
Query 253 GH-GRVYAAPYFHQFDAYRSIYVRKR 277
G V + P+ ++FD I+ +
Sbjct 240 GQTSNVKSIPHSYEFDLRALIFTENK 265
>gi|213970232|ref|ZP_03398363.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato
T1]
gi|213925113|gb|EEB58677.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato
T1]
Length=252
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 129/250 (52%), Gaps = 2/250 (0%)
Query 29 LGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFEIRNSNRQYGA 88
+GL+S E L R+A+ G GG G L RMG+G IAD D F N NRQ+G
Sbjct 2 IGLVSQQELDILAGKRIAVPGCGGTGYTYAECLVRMGVGGVNIADADTFGPENMNRQFGC 61
Query 89 MRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVDGIDAFEIDLR 148
+T G+ K+EV+ + INP+ ++A + + + N + +L DV+ D +D F I R
Sbjct 62 STNTIGRKKSEVLSERLLSINPQVSVKAI-DYLDEFNVSDYLTDVDVVCDTLDFFVIKPR 120
Query 149 RLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVDKFVAFIAGIA 208
LLY+EA++R I + P+ + VF P TF+ +FD+SD ++ F +A
Sbjct 121 LLLYKEARRRNIPVVLCCPVAYGVTVHVFLPNSPTFEEFFDISDQDTELESLKKFGGKLA 180
Query 209 PSATHRRSIDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGH-GRVYAAPYFHQFD 267
PS +++ ID +D E + S+ C +A+ + +LLG V + P+ ++FD
Sbjct 181 PSKLYKQYIDSPKLDFEKQKVSSLSATCLMATSFGSMIAHMLLLGQTSNVKSIPHSYEFD 240
Query 268 AYRSIYVRKR 277
I+ +
Sbjct 241 LRALIFTENK 250
>gi|333986396|ref|YP_004519003.1| UBA/THIF-type NAD/FAD binding protein [Methanobacterium sp. SWAN-1]
gi|333824540|gb|AEG17202.1| UBA/THIF-type NAD/FAD binding protein [Methanobacterium sp. SWAN-1]
Length=250
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/251 (29%), Positives = 114/251 (46%), Gaps = 18/251 (7%)
Query 20 SYDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFEI 79
+Y E R G+++ EQ +L++S++ + G GG+GG + LARMG+G I D D F++
Sbjct 9 NYWEIIDRQKGILNKKEQLKLKDSKITVIGCGGIGGAVIEMLARMGVGNLRIVDKDSFDL 68
Query 80 RNSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVDG 139
N NRQ + + G+ K EV + I+ I P E+ AF + + N LEG+DV+VD
Sbjct 69 SNINRQLMSSTESIGRPKTEVTKEIISSITPFTEVEAFNTELNENNVQKILEGSDVIVDA 128
Query 140 IDAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDPKGMTFDRYFDLSDAMNTVDK 199
+D I R L R A + GI + G P+ +++ F L A
Sbjct 129 LD--NIISRILTSRCAVKLGIPFVHGAIHGTMGQITTLTPETPSYEETFKLPSAGK---- 182
Query 200 FVAFIAGIAPSATHRRSIDLSYVDIENRTGPSVGLACHLASGVVAAEVLKILLGHGRVYA 259
+ P + + P +G ++ + A EV+KIL G +
Sbjct 183 ------DLTPEIISKVQ------KLNKEVPPVIGPVPNIIGCLQAFEVVKILTGRENIIT 230
Query 260 APYFHQFDAYR 270
AP FD +
Sbjct 231 APDVLMFDLLK 241
>gi|229079506|ref|ZP_04212045.1| Molybdopterin biosynthesis protein MoeB [Bacillus cereus Rock4-2]
gi|228703785|gb|EEL56232.1| Molybdopterin biosynthesis protein MoeB [Bacillus cereus Rock4-2]
Length=292
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/172 (35%), Positives = 100/172 (59%), Gaps = 3/172 (1%)
Query 21 YDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFEIR 80
Y E +N+G+ S EQ+ LRN +V I G+GGVGG + + +RMGIG T DPD FE+
Sbjct 17 YWEMVKKNIGVYSEQEQECLRNKKVIIFGLGGVGGYEAILFSRMGIGHITGVDPDEFEVS 76
Query 81 NSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVDGI 140
N NRQ A+ S G+ KA+V +V DI+P + ++N + ++G D++V+ +
Sbjct 77 NINRQMLALSSVVGEPKAKVAEQVVKDIHPYISTNFIQTRVDEDNVSELIKGHDIVVEAV 136
Query 141 DAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWV-VFDPKGMTFDRYFDLS 191
D ++ R +++R A++ GI ++G + +V F P G+ ++ ++S
Sbjct 137 D--DMPSRVIIHRTARELGIPSVGMSGSPPTRGFVSTFFPTGIPYEEALNIS 186
>gi|229079507|ref|ZP_04212046.1| Molybdopterin biosynthesis protein MoeB [Bacillus cereus Rock4-2]
gi|228703786|gb|EEL56233.1| Molybdopterin biosynthesis protein MoeB [Bacillus cereus Rock4-2]
Length=288
Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/159 (41%), Positives = 94/159 (60%), Gaps = 12/159 (7%)
Query 21 YDEAFCRNLGLISPTEQQRLRNSRVAIAGMGGVGGIDMVALARMGIGKFTIADPDVFEIR 80
Y+E+F RN+G+IS EQ++L+NSRV + G GGVGGI ++ LARMG+G + D DVFE
Sbjct 12 YEESFTRNIGVISVAEQEKLKNSRVTVVGAGGVGGITLIQLARMGVGSLHVIDQDVFEAS 71
Query 81 NSNRQYGAMRSTNGQAKAEVMRNIVHDINPEAEIRAFCEPIGKENAATFLEGADVLVDGI 140
N NRQ + S GQ KA+V ++ DINP +I E + ++NA FL DV++D
Sbjct 72 NINRQMLSSNSKLGQPKADVALEVLQDINPLLQIEITKEFVTEDNALEFLTNTDVIIDAT 131
Query 141 DAFEIDLRRLLYREAQQRGIYALGAGPLGFSTAWVVFDP 179
D + R +++R AQ+ LG + W+ P
Sbjct 132 D--NLVARVIIHRTAQK----------LGIPSIWIAVTP 158
Lambda K H
0.323 0.139 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 555428799294
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40