BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2340c

Length=413
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15841846|ref|NP_336883.1|  PE family protein [Mycobacterium tu...   774    0.0  
gi|289447981|ref|ZP_06437725.1|  PE-PGRS family protein [Mycobact...   773    0.0  
gi|253798586|ref|YP_003031587.1|  PE-PGRS family protein [Mycobac...   773    0.0  
gi|339632365|ref|YP_004724007.1|  PE-PGRS family protein [Mycobac...   772    0.0  
gi|121638228|ref|YP_978452.1|  PE-PGRS family protein [Mycobacter...   771    0.0  
gi|289443860|ref|ZP_06433604.1|  PE-PGRS family protein [Mycobact...   771    0.0  
gi|340627351|ref|YP_004745803.1|  PE-PGRS family protein [Mycobac...   768    0.0  
gi|339295244|gb|AEJ47355.1|  PE-PGRS family protein [Mycobacteriu...   347    2e-93
gi|339295245|gb|AEJ47356.1|  PE-PGRS family protein [Mycobacteriu...   263    4e-68
gi|289762507|ref|ZP_06521885.1|  PE-PGRS family protein [Mycobact...   249    5e-64
gi|183983531|ref|YP_001851822.1|  PE-PGRS family protein, PE_PGRS...   119    1e-24
gi|118618220|ref|YP_906552.1|  PE-PGRS family protein [Mycobacter...   119    1e-24
gi|57117029|ref|YP_177909.1|  PE-PGRS family protein [Mycobacteri...   113    6e-23
gi|297635466|ref|ZP_06953246.1|  PE-PGRS family protein [Mycobact...   113    7e-23
gi|31794030|ref|NP_856523.1|  PE-PGRS family protein [Mycobacteri...   113    7e-23
gi|148824043|ref|YP_001288797.1|  PE-PGRS family protein [Mycobac...   113    7e-23
gi|121638733|ref|YP_978957.1|  PE-PGRS family protein [Mycobacter...   113    7e-23
gi|339632862|ref|YP_004724504.1|  PE-PGRS family protein [Mycobac...   113    7e-23
gi|15842394|ref|NP_337431.1|  PE_PGRS family protein [Mycobacteri...   112    8e-23
gi|340627846|ref|YP_004746298.1|  PE-PGRS family protein [Mycobac...   112    9e-23
gi|308375462|ref|ZP_07668028.1|  putative PE family protein [Myco...   112    1e-22
gi|289444404|ref|ZP_06434148.1|  predicted protein [Mycobacterium...   112    1e-22
gi|339299309|gb|AEJ51419.1|  putative PE family protein [Mycobact...   112    1e-22
gi|306777137|ref|ZP_07415474.1|  hypothetical protein TMAG_01052 ...   112    1e-22
gi|313659797|ref|ZP_07816677.1|  PE-PGRS family protein [Mycobact...   112    1e-22
gi|339295694|gb|AEJ47805.1|  PE_PGRS family protein [Mycobacteriu...   112    1e-22
gi|148662694|ref|YP_001284217.1|  PE-PGRS family protein [Mycobac...   111    2e-22
gi|31792060|ref|NP_854553.1|  PE-PGRS family protein [Mycobacteri...   110    6e-22
gi|15840285|ref|NP_335322.1|  PE_PGRS family protein [Mycobacteri...   110    6e-22
gi|306796645|ref|ZP_07434947.1|  putative PE family protein [Myco...   110    6e-22
gi|57116793|ref|YP_177763.1|  PE-PGRS family protein [Mycobacteri...   109    7e-22
gi|339297525|gb|AEJ49635.1|  PE-PGRS family protein [Mycobacteriu...   109    8e-22
gi|313657701|ref|ZP_07814581.1|  PE-PGRS family protein [Mycobact...   108    1e-21
gi|254231180|ref|ZP_04924507.1|  PE-PGRS family protein [Mycobact...   108    1e-21
gi|118619548|ref|YP_907880.1|  PE-PGRS family protein [Mycobacter...   108    2e-21
gi|183984531|ref|YP_001852822.1|  PE-PGRS family protein [Mycobac...   107    3e-21
gi|183985312|ref|YP_001853603.1|  PE-PGRS family protein [Mycobac...   105    1e-20
gi|340625955|ref|YP_004744407.1|  PE-PGRS family protein [Mycobac...   102    1e-19
gi|306798777|ref|ZP_07437079.1|  putative PE family protein [Myco...  98.6    2e-18
gi|183982655|ref|YP_001850946.1|  PE-PGRS family protein [Mycobac...  96.7    7e-18
gi|240173275|ref|ZP_04751933.1|  PE-PGRS family protein [Mycobact...  96.3    9e-18
gi|183984370|ref|YP_001852661.1|  PE-PGRS family protein [Mycobac...  96.3    9e-18
gi|340627504|ref|YP_004745956.1|  PE-PGRS family protein [Mycobac...  95.9    1e-17
gi|339632516|ref|YP_004724158.1|  PE-PGRS family protein [Mycobac...  95.9    1e-17
gi|344220317|gb|AEN00948.1|  PE-PGRS family protein [Mycobacteriu...  95.9    1e-17
gi|57116996|ref|YP_177887.1|  PE-PGRS family protein [Mycobacteri...  95.9    1e-17
gi|183984530|ref|YP_001852821.1|  PE-PGRS family protein [Mycobac...  95.9    1e-17
gi|15842017|ref|NP_337054.1|  PE_PGRS family protein [Mycobacteri...  95.5    1e-17
gi|253798432|ref|YP_003031433.1|  hypothetical protein TBMG_04024...  95.5    1e-17
gi|289553720|ref|ZP_06442930.1|  LOW QUALITY PROTEIN: predicted p...  95.5    2e-17


>gi|15841846|ref|NP_336883.1| PE family protein [Mycobacterium tuberculosis CDC1551]
 gi|31793525|ref|NP_856018.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
 gi|57116973|ref|YP_177869.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
 52 more sequence titles
 
gi|148662168|ref|YP_001283691.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
 gi|148823541|ref|YP_001288295.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|167969895|ref|ZP_02552172.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
 gi|254232484|ref|ZP_04925811.1| PE-PGRS family protein [Mycobacterium tuberculosis C]
 gi|289575032|ref|ZP_06455259.1| PE-PGRS family protein [Mycobacterium tuberculosis K85]
 gi|289745634|ref|ZP_06505012.1| predicted protein [Mycobacterium tuberculosis 02_1987]
 gi|289754447|ref|ZP_06513825.1| PE-PGRS family protein [Mycobacterium tuberculosis EAS054]
 gi|289758465|ref|ZP_06517843.1| PE-PGRS family protein [Mycobacterium tuberculosis T85]
 gi|294994558|ref|ZP_06800249.1| PE-PGRS family protein [Mycobacterium tuberculosis 210]
 gi|297634938|ref|ZP_06952718.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
 gi|297731929|ref|ZP_06961047.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN R506]
 gi|298525826|ref|ZP_07013235.1| pe-pgrs family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306776599|ref|ZP_07414936.1| hypothetical protein TMAG_00529 [Mycobacterium tuberculosis SUMu001]
 gi|306780378|ref|ZP_07418715.1| hypothetical protein TMBG_00885 [Mycobacterium tuberculosis SUMu002]
 gi|306785123|ref|ZP_07423445.1| hypothetical protein TMCG_00435 [Mycobacterium tuberculosis SUMu003]
 gi|306789488|ref|ZP_07427810.1| hypothetical protein TMDG_00817 [Mycobacterium tuberculosis SUMu004]
 gi|306793812|ref|ZP_07432114.1| hypothetical protein TMEG_02706 [Mycobacterium tuberculosis SUMu005]
 gi|306798205|ref|ZP_07436507.1| hypothetical protein TMFG_01301 [Mycobacterium tuberculosis SUMu006]
 gi|306804083|ref|ZP_07440751.1| hypothetical protein TMHG_01529 [Mycobacterium tuberculosis SUMu008]
 gi|306808656|ref|ZP_07445324.1| hypothetical protein TMGG_00898 [Mycobacterium tuberculosis SUMu007]
 gi|306968483|ref|ZP_07481144.1| hypothetical protein TMIG_01012 [Mycobacterium tuberculosis SUMu009]
 gi|306972709|ref|ZP_07485370.1| hypothetical protein TMJG_00603 [Mycobacterium tuberculosis SUMu010]
 gi|307080419|ref|ZP_07489589.1| hypothetical protein TMKG_00600 [Mycobacterium tuberculosis SUMu011]
 gi|307085010|ref|ZP_07494123.1| hypothetical protein TMLG_03305 [Mycobacterium tuberculosis SUMu012]
 gi|313659264|ref|ZP_07816144.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN V2475]
 gi|7478580|pir||E70661 probable PE protein - Mycobacterium tuberculosis (strain H37RV)
 gi|13882111|gb|AAK46697.1| PE family protein [Mycobacterium tuberculosis CDC1551]
 gi|31619118|emb|CAD97230.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
 gi|41353687|emb|CAE55475.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|124601543|gb|EAY60553.1| PE-PGRS family protein [Mycobacterium tuberculosis C]
 gi|148506320|gb|ABQ74129.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
 gi|148722068|gb|ABR06693.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|289539463|gb|EFD44041.1| PE-PGRS family protein [Mycobacterium tuberculosis K85]
 gi|289686162|gb|EFD53650.1| predicted protein [Mycobacterium tuberculosis 02_1987]
 gi|289695034|gb|EFD62463.1| PE-PGRS family protein [Mycobacterium tuberculosis EAS054]
 gi|289714029|gb|EFD78041.1| PE-PGRS family protein [Mycobacterium tuberculosis T85]
 gi|298495620|gb|EFI30914.1| pe-pgrs family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308215061|gb|EFO74460.1| hypothetical protein TMAG_00529 [Mycobacterium tuberculosis SUMu001]
 gi|308326810|gb|EFP15661.1| hypothetical protein TMBG_00885 [Mycobacterium tuberculosis SUMu002]
 gi|308330329|gb|EFP19180.1| hypothetical protein TMCG_00435 [Mycobacterium tuberculosis SUMu003]
 gi|308334162|gb|EFP23013.1| hypothetical protein TMDG_00817 [Mycobacterium tuberculosis SUMu004]
 gi|308337967|gb|EFP26818.1| hypothetical protein TMEG_02706 [Mycobacterium tuberculosis SUMu005]
 gi|308341572|gb|EFP30423.1| hypothetical protein TMFG_01301 [Mycobacterium tuberculosis SUMu006]
 gi|308345144|gb|EFP33995.1| hypothetical protein TMGG_00898 [Mycobacterium tuberculosis SUMu007]
 gi|308349447|gb|EFP38298.1| hypothetical protein TMHG_01529 [Mycobacterium tuberculosis SUMu008]
 gi|308353998|gb|EFP42849.1| hypothetical protein TMIG_01012 [Mycobacterium tuberculosis SUMu009]
 gi|308357940|gb|EFP46791.1| hypothetical protein TMJG_00603 [Mycobacterium tuberculosis SUMu010]
 gi|308361877|gb|EFP50728.1| hypothetical protein TMKG_00600 [Mycobacterium tuberculosis SUMu011]
 gi|308365461|gb|EFP54312.1| hypothetical protein TMLG_03305 [Mycobacterium tuberculosis SUMu012]
 gi|323719249|gb|EGB28394.1| PE-PGRS family protein [Mycobacterium tuberculosis CDC1551A]
 gi|326903956|gb|EGE50889.1| PE-PGRS family protein [Mycobacterium tuberculosis W-148]
 gi|344220167|gb|AEN00798.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=413

 Score =  774 bits (1998),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 413/413 (100%), Positives = 413/413 (100%), Gaps = 0/413 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ
Sbjct  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQ  120
            AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQ
Sbjct  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQ  120

Query  121  SRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAHGSGVSASHG  180
            SRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAHGSGVSASHG
Sbjct  121  SRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAHGSGVSASHG  180

Query  181  SGATGAAGVADPGGSGAGVGSAAGNGTGAGSADAVGGAGTGRDIVGSVRGDGGVGMASGD  240
            SGATGAAGVADPGGSGAGVGSAAGNGTGAGSADAVGGAGTGRDIVGSVRGDGGVGMASGD
Sbjct  181  SGATGAAGVADPGGSGAGVGSAAGNGTGAGSADAVGGAGTGRDIVGSVRGDGGVGMASGD  240

Query  241  GGLSTGAAGASAEGGLMPGFGGAPWVGGHWGLGGEGHSGAIGGVGEQVAPAVATAPAVSP  300
            GGLSTGAAGASAEGGLMPGFGGAPWVGGHWGLGGEGHSGAIGGVGEQVAPAVATAPAVSP
Sbjct  241  GGLSTGAAGASAEGGLMPGFGGAPWVGGHWGLGGEGHSGAIGGVGEQVAPAVATAPAVSP  300

Query  301  ATTSAVAAESGSTPATKAQAMHATTNPGNAAHQGNPADPGNSARRADGGRDEQLLLLPLT  360
            ATTSAVAAESGSTPATKAQAMHATTNPGNAAHQGNPADPGNSARRADGGRDEQLLLLPLT
Sbjct  301  ATTSAVAAESGSTPATKAQAMHATTNPGNAAHQGNPADPGNSARRADGGRDEQLLLLPLT  360

Query  361  SLRGLRHTLKKLSGLRARNGLLTASGDNASGSGRPWDRDQLLRALGLRPPGHE  413
            SLRGLRHTLKKLSGLRARNGLLTASGDNASGSGRPWDRDQLLRALGLRPPGHE
Sbjct  361  SLRGLRHTLKKLSGLRARNGLLTASGDNASGSGRPWDRDQLLRALGLRPPGHE  413


>gi|289447981|ref|ZP_06437725.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289420939|gb|EFD18140.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A]
Length=413

 Score =  773 bits (1997),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 412/413 (99%), Positives = 412/413 (99%), Gaps = 0/413 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ
Sbjct  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQ  120
            AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSEL QDRTGGTGTGQ
Sbjct  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELTQDRTGGTGTGQ  120

Query  121  SRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAHGSGVSASHG  180
            SRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAHGSGVSASHG
Sbjct  121  SRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAHGSGVSASHG  180

Query  181  SGATGAAGVADPGGSGAGVGSAAGNGTGAGSADAVGGAGTGRDIVGSVRGDGGVGMASGD  240
            SGATGAAGVADPGGSGAGVGSAAGNGTGAGSADAVGGAGTGRDIVGSVRGDGGVGMASGD
Sbjct  181  SGATGAAGVADPGGSGAGVGSAAGNGTGAGSADAVGGAGTGRDIVGSVRGDGGVGMASGD  240

Query  241  GGLSTGAAGASAEGGLMPGFGGAPWVGGHWGLGGEGHSGAIGGVGEQVAPAVATAPAVSP  300
            GGLSTGAAGASAEGGLMPGFGGAPWVGGHWGLGGEGHSGAIGGVGEQVAPAVATAPAVSP
Sbjct  241  GGLSTGAAGASAEGGLMPGFGGAPWVGGHWGLGGEGHSGAIGGVGEQVAPAVATAPAVSP  300

Query  301  ATTSAVAAESGSTPATKAQAMHATTNPGNAAHQGNPADPGNSARRADGGRDEQLLLLPLT  360
            ATTSAVAAESGSTPATKAQAMHATTNPGNAAHQGNPADPGNSARRADGGRDEQLLLLPLT
Sbjct  301  ATTSAVAAESGSTPATKAQAMHATTNPGNAAHQGNPADPGNSARRADGGRDEQLLLLPLT  360

Query  361  SLRGLRHTLKKLSGLRARNGLLTASGDNASGSGRPWDRDQLLRALGLRPPGHE  413
            SLRGLRHTLKKLSGLRARNGLLTASGDNASGSGRPWDRDQLLRALGLRPPGHE
Sbjct  361  SLRGLRHTLKKLSGLRARNGLLTASGDNASGSGRPWDRDQLLRALGLRPPGHE  413


>gi|253798586|ref|YP_003031587.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|254551387|ref|ZP_05141834.1| PE-PGRS family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|289553873|ref|ZP_06443083.1| predicted protein [Mycobacterium tuberculosis KZN 605]
 gi|253320089|gb|ACT24692.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|289438505|gb|EFD20998.1| predicted protein [Mycobacterium tuberculosis KZN 605]
 gi|328458353|gb|AEB03776.1| hypothetical protein TBSG_01647 [Mycobacterium tuberculosis KZN 
4207]
 gi|339298864|gb|AEJ50974.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180]
Length=445

 Score =  773 bits (1996),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 413/413 (100%), Positives = 413/413 (100%), Gaps = 0/413 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ
Sbjct  33   MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  92

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQ  120
            AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQ
Sbjct  93   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQ  152

Query  121  SRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAHGSGVSASHG  180
            SRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAHGSGVSASHG
Sbjct  153  SRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAHGSGVSASHG  212

Query  181  SGATGAAGVADPGGSGAGVGSAAGNGTGAGSADAVGGAGTGRDIVGSVRGDGGVGMASGD  240
            SGATGAAGVADPGGSGAGVGSAAGNGTGAGSADAVGGAGTGRDIVGSVRGDGGVGMASGD
Sbjct  213  SGATGAAGVADPGGSGAGVGSAAGNGTGAGSADAVGGAGTGRDIVGSVRGDGGVGMASGD  272

Query  241  GGLSTGAAGASAEGGLMPGFGGAPWVGGHWGLGGEGHSGAIGGVGEQVAPAVATAPAVSP  300
            GGLSTGAAGASAEGGLMPGFGGAPWVGGHWGLGGEGHSGAIGGVGEQVAPAVATAPAVSP
Sbjct  273  GGLSTGAAGASAEGGLMPGFGGAPWVGGHWGLGGEGHSGAIGGVGEQVAPAVATAPAVSP  332

Query  301  ATTSAVAAESGSTPATKAQAMHATTNPGNAAHQGNPADPGNSARRADGGRDEQLLLLPLT  360
            ATTSAVAAESGSTPATKAQAMHATTNPGNAAHQGNPADPGNSARRADGGRDEQLLLLPLT
Sbjct  333  ATTSAVAAESGSTPATKAQAMHATTNPGNAAHQGNPADPGNSARRADGGRDEQLLLLPLT  392

Query  361  SLRGLRHTLKKLSGLRARNGLLTASGDNASGSGRPWDRDQLLRALGLRPPGHE  413
            SLRGLRHTLKKLSGLRARNGLLTASGDNASGSGRPWDRDQLLRALGLRPPGHE
Sbjct  393  SLRGLRHTLKKLSGLRARNGLLTASGDNASGSGRPWDRDQLLRALGLRPPGHE  445


>gi|339632365|ref|YP_004724007.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
 gi|339331721|emb|CCC27423.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=413

 Score =  772 bits (1993),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 412/413 (99%), Positives = 412/413 (99%), Gaps = 0/413 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ
Sbjct  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQ  120
            AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQ
Sbjct  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQ  120

Query  121  SRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAHGSGVSASHG  180
            SRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAHGSGVSASHG
Sbjct  121  SRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAHGSGVSASHG  180

Query  181  SGATGAAGVADPGGSGAGVGSAAGNGTGAGSADAVGGAGTGRDIVGSVRGDGGVGMASGD  240
            SGATGAAGVADPGGSGAGVGSAAGNGTGAGSADAVGGAGTGRDIVGSVRGDGGVGMASGD
Sbjct  181  SGATGAAGVADPGGSGAGVGSAAGNGTGAGSADAVGGAGTGRDIVGSVRGDGGVGMASGD  240

Query  241  GGLSTGAAGASAEGGLMPGFGGAPWVGGHWGLGGEGHSGAIGGVGEQVAPAVATAPAVSP  300
            GGLSTGAAGASAEGGLMPGFGGAPWVGGHWGLGGEGHSGAIG VGEQVAPAVATAPAVSP
Sbjct  241  GGLSTGAAGASAEGGLMPGFGGAPWVGGHWGLGGEGHSGAIGRVGEQVAPAVATAPAVSP  300

Query  301  ATTSAVAAESGSTPATKAQAMHATTNPGNAAHQGNPADPGNSARRADGGRDEQLLLLPLT  360
            ATTSAVAAESGSTPATKAQAMHATTNPGNAAHQGNPADPGNSARRADGGRDEQLLLLPLT
Sbjct  301  ATTSAVAAESGSTPATKAQAMHATTNPGNAAHQGNPADPGNSARRADGGRDEQLLLLPLT  360

Query  361  SLRGLRHTLKKLSGLRARNGLLTASGDNASGSGRPWDRDQLLRALGLRPPGHE  413
            SLRGLRHTLKKLSGLRARNGLLTASGDNASGSGRPWDRDQLLRALGLRPPGHE
Sbjct  361  SLRGLRHTLKKLSGLRARNGLLTASGDNASGSGRPWDRDQLLRALGLRPPGHE  413


>gi|121638228|ref|YP_978452.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224990722|ref|YP_002645409.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|121493876|emb|CAL72351.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224773835|dbj|BAH26641.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|341602266|emb|CCC64940.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=413

 Score =  771 bits (1992),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 412/413 (99%), Positives = 412/413 (99%), Gaps = 0/413 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ
Sbjct  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQ  120
            AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQ
Sbjct  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQ  120

Query  121  SRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAHGSGVSASHG  180
            SRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAHGSGVSASHG
Sbjct  121  SRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAHGSGVSASHG  180

Query  181  SGATGAAGVADPGGSGAGVGSAAGNGTGAGSADAVGGAGTGRDIVGSVRGDGGVGMASGD  240
            SGATGAAGVADPGGSGAGVGSAAGNGTGAGSADAVGGAGTG DIVGSVRGDGGVGMASGD
Sbjct  181  SGATGAAGVADPGGSGAGVGSAAGNGTGAGSADAVGGAGTGTDIVGSVRGDGGVGMASGD  240

Query  241  GGLSTGAAGASAEGGLMPGFGGAPWVGGHWGLGGEGHSGAIGGVGEQVAPAVATAPAVSP  300
            GGLSTGAAGASAEGGLMPGFGGAPWVGGHWGLGGEGHSGAIGGVGEQVAPAVATAPAVSP
Sbjct  241  GGLSTGAAGASAEGGLMPGFGGAPWVGGHWGLGGEGHSGAIGGVGEQVAPAVATAPAVSP  300

Query  301  ATTSAVAAESGSTPATKAQAMHATTNPGNAAHQGNPADPGNSARRADGGRDEQLLLLPLT  360
            ATTSAVAAESGSTPATKAQAMHATTNPGNAAHQGNPADPGNSARRADGGRDEQLLLLPLT
Sbjct  301  ATTSAVAAESGSTPATKAQAMHATTNPGNAAHQGNPADPGNSARRADGGRDEQLLLLPLT  360

Query  361  SLRGLRHTLKKLSGLRARNGLLTASGDNASGSGRPWDRDQLLRALGLRPPGHE  413
            SLRGLRHTLKKLSGLRARNGLLTASGDNASGSGRPWDRDQLLRALGLRPPGHE
Sbjct  361  SLRGLRHTLKKLSGLRARNGLLTASGDNASGSGRPWDRDQLLRALGLRPPGHE  413


>gi|289443860|ref|ZP_06433604.1| PE-PGRS family protein [Mycobacterium tuberculosis T46]
 gi|289570479|ref|ZP_06450706.1| PE-PGRS family protein [Mycobacterium tuberculosis T17]
 gi|289750947|ref|ZP_06510325.1| PE-PGRS family protein [Mycobacterium tuberculosis T92]
 gi|289416779|gb|EFD14019.1| PE-PGRS family protein [Mycobacterium tuberculosis T46]
 gi|289544233|gb|EFD47881.1| PE-PGRS family protein [Mycobacterium tuberculosis T17]
 gi|289691534|gb|EFD58963.1| PE-PGRS family protein [Mycobacterium tuberculosis T92]
Length=413

 Score =  771 bits (1990),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 412/413 (99%), Positives = 412/413 (99%), Gaps = 0/413 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ
Sbjct  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQ  120
            AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQ
Sbjct  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQ  120

Query  121  SRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAHGSGVSASHG  180
            SRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAHGSGVSASHG
Sbjct  121  SRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAHGSGVSASHG  180

Query  181  SGATGAAGVADPGGSGAGVGSAAGNGTGAGSADAVGGAGTGRDIVGSVRGDGGVGMASGD  240
            SGATGAAGVADPGGSGAGVGSAAGNGTGAGSADAVGGAGTGRDIVGSVRGDGGVGMASGD
Sbjct  181  SGATGAAGVADPGGSGAGVGSAAGNGTGAGSADAVGGAGTGRDIVGSVRGDGGVGMASGD  240

Query  241  GGLSTGAAGASAEGGLMPGFGGAPWVGGHWGLGGEGHSGAIGGVGEQVAPAVATAPAVSP  300
            GGLSTGAAGASAEGGLMPGFGGAPWVGGHWGLGGEGHSGAIGGVGEQVAPAVATAPAVSP
Sbjct  241  GGLSTGAAGASAEGGLMPGFGGAPWVGGHWGLGGEGHSGAIGGVGEQVAPAVATAPAVSP  300

Query  301  ATTSAVAAESGSTPATKAQAMHATTNPGNAAHQGNPADPGNSARRADGGRDEQLLLLPLT  360
            ATTSAVAAESGSTPATKAQAMHATTNPGNAAHQGNPADPGNSARRADGGRDEQLLLLPLT
Sbjct  301  ATTSAVAAESGSTPATKAQAMHATTNPGNAAHQGNPADPGNSARRADGGRDEQLLLLPLT  360

Query  361  SLRGLRHTLKKLSGLRARNGLLTASGDNASGSGRPWDRDQLLRALGLRPPGHE  413
            SLRGLRHTLKKLSGLRARNGLLTASGDNASGSGRPWD DQLLRALGLRPPGHE
Sbjct  361  SLRGLRHTLKKLSGLRARNGLLTASGDNASGSGRPWDGDQLLRALGLRPPGHE  413


>gi|340627351|ref|YP_004745803.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
 gi|340005541|emb|CCC44703.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=413

 Score =  768 bits (1982),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 409/413 (99%), Positives = 409/413 (99%), Gaps = 0/413 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ
Sbjct  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQ  120
            AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQ
Sbjct  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQ  120

Query  121  SRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAHGSGVSASHG  180
            SRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAHGSGVSASHG
Sbjct  121  SRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAHGSGVSASHG  180

Query  181  SGATGAAGVADPGGSGAGVGSAAGNGTGAGSADAVGGAGTGRDIVGSVRGDGGVGMASGD  240
            SGATGAAGVADPGGSGAG GSAAGNGTGAGSADAVGGAGTGRDIVGSVRGDGGV MASGD
Sbjct  181  SGATGAAGVADPGGSGAGAGSAAGNGTGAGSADAVGGAGTGRDIVGSVRGDGGVSMASGD  240

Query  241  GGLSTGAAGASAEGGLMPGFGGAPWVGGHWGLGGEGHSGAIGGVGEQVAPAVATAPAVSP  300
            GGLSTGAAGASAEGGLMPGFGG PWVGGHWGLGGEGHSGAIGGVGEQVAPAVATAPAVSP
Sbjct  241  GGLSTGAAGASAEGGLMPGFGGTPWVGGHWGLGGEGHSGAIGGVGEQVAPAVATAPAVSP  300

Query  301  ATTSAVAAESGSTPATKAQAMHATTNPGNAAHQGNPADPGNSARRADGGRDEQLLLLPLT  360
            ATTSAVAAESGSTPATKAQAMHATTNPGNAAHQGNPADPGNSARRADGGRDEQLLLLPLT
Sbjct  301  ATTSAVAAESGSTPATKAQAMHATTNPGNAAHQGNPADPGNSARRADGGRDEQLLLLPLT  360

Query  361  SLRGLRHTLKKLSGLRARNGLLTASGDNASGSGRPWDRDQLLRALGLRPPGHE  413
            SLRGLRHTLKKLSGLRARNGLLTASGDNAS SGRPWDRDQLLRALGLRPPGHE
Sbjct  361  SLRGLRHTLKKLSGLRARNGLLTASGDNASASGRPWDRDQLLRALGLRPPGHE  413


>gi|339295244|gb|AEJ47355.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5079]
Length=178

 Score =  347 bits (891),  Expect = 2e-93, Method: Compositional matrix adjust.
 Identities = 178/178 (100%), Positives = 178/178 (100%), Gaps = 0/178 (0%)

Query  236  MASGDGGLSTGAAGASAEGGLMPGFGGAPWVGGHWGLGGEGHSGAIGGVGEQVAPAVATA  295
            MASGDGGLSTGAAGASAEGGLMPGFGGAPWVGGHWGLGGEGHSGAIGGVGEQVAPAVATA
Sbjct  1    MASGDGGLSTGAAGASAEGGLMPGFGGAPWVGGHWGLGGEGHSGAIGGVGEQVAPAVATA  60

Query  296  PAVSPATTSAVAAESGSTPATKAQAMHATTNPGNAAHQGNPADPGNSARRADGGRDEQLL  355
            PAVSPATTSAVAAESGSTPATKAQAMHATTNPGNAAHQGNPADPGNSARRADGGRDEQLL
Sbjct  61   PAVSPATTSAVAAESGSTPATKAQAMHATTNPGNAAHQGNPADPGNSARRADGGRDEQLL  120

Query  356  LLPLTSLRGLRHTLKKLSGLRARNGLLTASGDNASGSGRPWDRDQLLRALGLRPPGHE  413
            LLPLTSLRGLRHTLKKLSGLRARNGLLTASGDNASGSGRPWDRDQLLRALGLRPPGHE
Sbjct  121  LLPLTSLRGLRHTLKKLSGLRARNGLLTASGDNASGSGRPWDRDQLLRALGLRPPGHE  178


>gi|339295245|gb|AEJ47356.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5079]
Length=232

 Score =  263 bits (672),  Expect = 4e-68, Method: Compositional matrix adjust.
 Identities = 184/193 (96%), Positives = 184/193 (96%), Gaps = 0/193 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ
Sbjct  33   MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  92

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQ  120
            AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQ
Sbjct  93   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQ  152

Query  121  SRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAHGSGVSASHG  180
            SRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAHGSGVSASHG
Sbjct  153  SRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAHGSGVSASHG  212

Query  181  SGATGAAGVADPG  193
            SG         PG
Sbjct  213  SGRNRCRRCRGPG  225


>gi|289762507|ref|ZP_06521885.1| PE-PGRS family protein [Mycobacterium tuberculosis GM 1503]
 gi|289710013|gb|EFD74029.1| PE-PGRS family protein [Mycobacterium tuberculosis GM 1503]
Length=200

 Score =  249 bits (637),  Expect = 5e-64, Method: Compositional matrix adjust.
 Identities = 174/174 (100%), Positives = 174/174 (100%), Gaps = 0/174 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ
Sbjct  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQ  120
            AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQ
Sbjct  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQ  120

Query  121  SRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAHGSG  174
            SRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAHGSG
Sbjct  121  SRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAHGSG  174


>gi|183983531|ref|YP_001851822.1| PE-PGRS family protein, PE_PGRS39 [Mycobacterium marinum M]
 gi|183176857|gb|ACC41967.1| PE-PGRS family protein, PE_PGRS39 [Mycobacterium marinum M]
Length=426

 Score =  119 bits (298),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 75/115 (66%), Positives = 88/115 (77%), Gaps = 0/115 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            M HVT +PN+LAA+AG+LAAI STMR A+AAAAAPTA V  AGGD VSAGIA+LFGA A 
Sbjct  1    MPHVTTSPNLLAATAGDLAAIASTMRQASAAAAAPTAAVQPAGGDIVSAGIASLFGAHAY  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGG  115
             YQ +SA+AA FHDRFV+ILQ  A AY   EA NA PL+KA GV +  A+ + GG
Sbjct  61   NYQVLSAKAAEFHDRFVEILQTSAQAYGSTEATNASPLEKAIGVFTAPAEGQAGG  115


>gi|118618220|ref|YP_906552.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
 gi|118570330|gb|ABL05081.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
Length=426

 Score =  119 bits (297),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 75/115 (66%), Positives = 88/115 (77%), Gaps = 0/115 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            M HVT +PN+LAA+AG+LAAI STMR A+AAAAAPTA V  AGGD VSAGIA+LFGA A 
Sbjct  1    MPHVTTSPNLLAATAGDLAAIASTMRQASAAAAAPTAAVQPAGGDVVSAGIASLFGAHAY  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGG  115
             YQ +SA+AA FHDRFV+ILQ  A AY   EA NA PL+KA GV +  A+ + GG
Sbjct  61   NYQVLSAKAAEFHDRFVEILQTSAQAYGSTEATNASPLEKAIGVFTAPAEGQAGG  115


>gi|57117029|ref|YP_177909.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
 gi|7476147|pir||H70589 hypothetical glycine-rich protein Rv2853 - Mycobacterium tuberculosis 
(strain H37RV)
 gi|41352758|emb|CAE55525.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|344220685|gb|AEN01316.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=615

 Score =  113 bits (282),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 62/114 (55%), Positives = 77/114 (68%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            M +V A+P+++ A+A  LA IGS +  AN AAA PT  V+AA  D+VS  IAALFGA A+
Sbjct  1    MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
            +YQ +S QAA FH RFVQ L   AA+YA  EAANA PLQ A  V++  AQ   G
Sbjct  61   SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLG  114


>gi|297635466|ref|ZP_06953246.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
 gi|297732465|ref|ZP_06961583.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN R506]
Length=615

 Score =  113 bits (282),  Expect = 7e-23, Method: Compositional matrix adjust.
 Identities = 62/114 (55%), Positives = 77/114 (68%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            M +V A+P+++ A+A  LA IGS +  AN AAA PT  V+AA  D+VS  IAALFGA A+
Sbjct  1    MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
            +YQ +S QAA FH RFVQ L   AA+YA  EAANA PLQ A  V++  AQ   G
Sbjct  61   SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLG  114


>gi|31794030|ref|NP_856523.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
 gi|31619624|emb|CAD95063.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=615

 Score =  113 bits (282),  Expect = 7e-23, Method: Compositional matrix adjust.
 Identities = 62/114 (55%), Positives = 77/114 (68%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            M +V A+P+++ A+A  LA IGS +  AN AAA PT  V+AA  D+VS  IAALFGA A+
Sbjct  1    MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
            +YQ +S QAA FH RFVQ L   AA+YA  EAANA PLQ A  V++  AQ   G
Sbjct  61   SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLG  114


>gi|148824043|ref|YP_001288797.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|253798061|ref|YP_003031062.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|254232947|ref|ZP_04926274.1| PE-PGRS family protein [Mycobacterium tuberculosis C]
 6 more sequence titles
 
gi|289553359|ref|ZP_06442569.1| predicted protein [Mycobacterium tuberculosis KZN 605]
 gi|124602006|gb|EAY61016.1| PE-PGRS family protein [Mycobacterium tuberculosis C]
 gi|148722570|gb|ABR07195.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|253319564|gb|ACT24167.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|289437991|gb|EFD20484.1| predicted protein [Mycobacterium tuberculosis KZN 605]
 gi|328457834|gb|AEB03257.1| hypothetical protein TBSG_01128 [Mycobacterium tuberculosis KZN 
4207]
Length=663

 Score =  113 bits (282),  Expect = 7e-23, Method: Compositional matrix adjust.
 Identities = 62/114 (55%), Positives = 77/114 (68%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            M +V A+P+++ A+A  LA IGS +  AN AAA PT  V+AA  D+VS  IAALFGA A+
Sbjct  49   MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR  108

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
            +YQ +S QAA FH RFVQ L   AA+YA  EAANA PLQ A  V++  AQ   G
Sbjct  109  SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLG  162


>gi|121638733|ref|YP_978957.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224991225|ref|YP_002645914.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|121494381|emb|CAL72862.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224774340|dbj|BAH27146.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|341602771|emb|CCC65449.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=597

 Score =  113 bits (282),  Expect = 7e-23, Method: Compositional matrix adjust.
 Identities = 62/114 (55%), Positives = 77/114 (68%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            M +V A+P+++ A+A  LA IGS +  AN AAA PT  V+AA  D+VS  IAALFGA A+
Sbjct  1    MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
            +YQ +S QAA FH RFVQ L   AA+YA  EAANA PLQ A  V++  AQ   G
Sbjct  61   SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLG  114


>gi|339632862|ref|YP_004724504.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
 gi|339332218|emb|CCC27928.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=615

 Score =  113 bits (282),  Expect = 7e-23, Method: Compositional matrix adjust.
 Identities = 62/114 (55%), Positives = 77/114 (68%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            M +V A+P+++ A+A  LA IGS +  AN AAA PT  V+AA  D+VS  IAALFGA A+
Sbjct  1    MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
            +YQ +S QAA FH RFVQ L   AA+YA  EAANA PLQ A  V++  AQ   G
Sbjct  61   SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLG  114


>gi|15842394|ref|NP_337431.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
 gi|13882694|gb|AAK47245.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=663

 Score =  112 bits (281),  Expect = 8e-23, Method: Compositional matrix adjust.
 Identities = 62/114 (55%), Positives = 77/114 (68%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            M +V A+P+++ A+A  LA IGS +  AN AAA PT  V+AA  D+VS  IAALFGA A+
Sbjct  49   MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR  108

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
            +YQ +S QAA FH RFVQ L   AA+YA  EAANA PLQ A  V++  AQ   G
Sbjct  109  SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLG  162


>gi|340627846|ref|YP_004746298.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
 gi|340006036|emb|CCC45206.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=615

 Score =  112 bits (281),  Expect = 9e-23, Method: Compositional matrix adjust.
 Identities = 62/114 (55%), Positives = 77/114 (68%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            M +V A+P+++ A+A  LA IGS +  AN AAA PT  V+AA  D+VS  IAALFGA A+
Sbjct  1    MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
            +YQ +S QAA FH RFVQ L   AA+YA  EAANA PLQ A  V++  AQ   G
Sbjct  61   SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLG  114


>gi|308375462|ref|ZP_07668028.1| putative PE family protein [Mycobacterium tuberculosis SUMu007]
 gi|308346264|gb|EFP35115.1| putative PE family protein [Mycobacterium tuberculosis SUMu007]
Length=525

 Score =  112 bits (281),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 62/114 (55%), Positives = 77/114 (68%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            M +V A+P+++ A+A  LA IGS +  AN AAA PT  V+AA  D+VS  IAALFGA A+
Sbjct  49   MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR  108

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
            +YQ +S QAA FH RFVQ L   AA+YA  EAANA PLQ A  V++  AQ   G
Sbjct  109  SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLG  162


>gi|289444404|ref|ZP_06434148.1| predicted protein [Mycobacterium tuberculosis T46]
 gi|289417323|gb|EFD14563.1| predicted protein [Mycobacterium tuberculosis T46]
Length=516

 Score =  112 bits (280),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 62/114 (55%), Positives = 77/114 (68%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            M +V A+P+++ A+A  LA IGS +  AN AAA PT  V+AA  D+VS  IAALFGA A+
Sbjct  49   MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR  108

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
            +YQ +S QAA FH RFVQ L   AA+YA  EAANA PLQ A  V++  AQ   G
Sbjct  109  SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLG  162


>gi|339299309|gb|AEJ51419.1| putative PE family protein [Mycobacterium tuberculosis CCDC5180]
Length=479

 Score =  112 bits (280),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 62/114 (55%), Positives = 77/114 (68%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            M +V A+P+++ A+A  LA IGS +  AN AAA PT  V+AA  D+VS  IAALFGA A+
Sbjct  1    MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
            +YQ +S QAA FH RFVQ L   AA+YA  EAANA PLQ A  V++  AQ   G
Sbjct  61   SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLG  114


>gi|306777137|ref|ZP_07415474.1| hypothetical protein TMAG_01052 [Mycobacterium tuberculosis SUMu001]
 gi|308214506|gb|EFO73905.1| hypothetical protein TMAG_01052 [Mycobacterium tuberculosis SUMu001]
Length=390

 Score =  112 bits (280),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 62/114 (55%), Positives = 77/114 (68%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            M +V A+P+++ A+A  LA IGS +  AN AAA PT  V+AA  D+VS  IAALFGA A+
Sbjct  1    MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
            +YQ +S QAA FH RFVQ L   AA+YA  EAANA PLQ A  V++  AQ   G
Sbjct  61   SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLG  114


>gi|313659797|ref|ZP_07816677.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN V2475]
Length=408

 Score =  112 bits (280),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 62/114 (55%), Positives = 77/114 (68%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            M +V A+P+++ A+A  LA IGS +  AN AAA PT  V+AA  D+VS  IAALFGA A+
Sbjct  1    MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
            +YQ +S QAA FH RFVQ L   AA+YA  EAANA PLQ A  V++  AQ   G
Sbjct  61   SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLG  114


>gi|339295694|gb|AEJ47805.1| PE_PGRS family protein [Mycobacterium tuberculosis CCDC5079]
Length=558

 Score =  112 bits (279),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 62/114 (55%), Positives = 77/114 (68%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            M +V A+P+++ A+A  LA IGS +  AN AAA PT  V+AA  D+VS  IAALFGA A+
Sbjct  1    MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
            +YQ +S QAA FH RFVQ L   AA+YA  EAANA PLQ A  V++  AQ   G
Sbjct  61   SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLG  114


>gi|148662694|ref|YP_001284217.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
 gi|148506846|gb|ABQ74655.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=614

 Score =  111 bits (278),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 61/112 (55%), Positives = 76/112 (68%), Gaps = 0/112 (0%)

Query  3    HVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQAY  62
            +V A+P+++ A+A  LA IGS +  AN AAA PT  V+AA  D+VS  IAALFGA A++Y
Sbjct  2    YVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHARSY  61

Query  63   QAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
            Q +S QAA FH RFVQ L   AA+YA  EAANA PLQ A  V++  AQ   G
Sbjct  62   QTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLG  113


>gi|31792060|ref|NP_854553.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
 gi|31617647|emb|CAD93757.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=608

 Score =  110 bits (274),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 66/114 (58%), Positives = 80/114 (71%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            MS+V A P ++AA+A  LA IGST+ AANAAA APT GVLAAG D+VSA +A+LF   AQ
Sbjct  1    MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
            AYQ +  QAA FH+RF+Q L   A AY  AEAANA PLQ+A  V++   Q   G
Sbjct  61   AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLG  114


>gi|15840285|ref|NP_335322.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
 gi|121636795|ref|YP_977018.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|148822080|ref|YP_001286834.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 18 more sequence titles
 
gi|224989266|ref|YP_002643953.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253800106|ref|YP_003033107.1| hypothetical protein TBMG_03118 [Mycobacterium tuberculosis KZN 
1435]
 gi|289555347|ref|ZP_06444557.1| predicted protein [Mycobacterium tuberculosis KZN 605]
 gi|294996352|ref|ZP_06802043.1| PE-PGRS family protein [Mycobacterium tuberculosis 210]
 gi|297633389|ref|ZP_06951169.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
 gi|297730374|ref|ZP_06959492.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN R506]
 gi|339630937|ref|YP_004722579.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
 gi|13880446|gb|AAK45136.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
 gi|121492442|emb|CAL70910.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|148720607|gb|ABR05232.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|224772379|dbj|BAH25185.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253321609|gb|ACT26212.1| predicted protein [Mycobacterium tuberculosis KZN 1435]
 gi|289439979|gb|EFD22472.1| predicted protein [Mycobacterium tuberculosis KZN 605]
 gi|328459844|gb|AEB05267.1| hypothetical protein TBSG_03138 [Mycobacterium tuberculosis KZN 
4207]
 gi|339293884|gb|AEJ45995.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5079]
 gi|339330293|emb|CCC25953.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
 gi|341600811|emb|CCC63482.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
 gi|344218699|gb|AEM99329.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=609

 Score =  110 bits (274),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 66/114 (58%), Positives = 80/114 (71%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            MS+V A P ++AA+A  LA IGST+ AANAAA APT GVLAAG D+VSA +A+LF   AQ
Sbjct  1    MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
            AYQ +  QAA FH+RF+Q L   A AY  AEAANA PLQ+A  V++   Q   G
Sbjct  61   AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLG  114


>gi|306796645|ref|ZP_07434947.1| putative PE family protein [Mycobacterium tuberculosis SUMu006]
 gi|308342904|gb|EFP31755.1| putative PE family protein [Mycobacterium tuberculosis SUMu006]
Length=320

 Score =  110 bits (274),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 67/114 (59%), Positives = 79/114 (70%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            MS+V A P ++AA A  LA IGST+ AANAAA APT GVLAAG DDVSA +A+LF   AQ
Sbjct  1    MSYVLATPEMVAAVANNLAQIGSTLSAANAAALAPTTGVLAAGADDVSAAVASLFSGHAQ  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
            AYQ +  QAA FH+RF+Q L   A AY  AEAANA PLQ+A  V++   Q   G
Sbjct  61   AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLG  114


>gi|57116793|ref|YP_177763.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
 gi|148660649|ref|YP_001282172.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
 gi|7476127|pir||H70816 hypothetical glycine-rich protein Rv0872c - Mycobacterium tuberculosis 
(strain H37RV)
 gi|38490245|emb|CAE55332.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|148504801|gb|ABQ72610.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=606

 Score =  109 bits (273),  Expect = 7e-22, Method: Compositional matrix adjust.
 Identities = 66/114 (58%), Positives = 80/114 (71%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            MS+V A P ++AA+A  LA IGST+ AANAAA APT GVLAAG D+VSA +A+LF   AQ
Sbjct  1    MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
            AYQ +  QAA FH+RF+Q L   A AY  AEAANA PLQ+A  V++   Q   G
Sbjct  61   AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLG  114


>gi|339297525|gb|AEJ49635.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180]
Length=650

 Score =  109 bits (273),  Expect = 8e-22, Method: Compositional matrix adjust.
 Identities = 64/106 (61%), Positives = 78/106 (74%), Gaps = 0/106 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            MS+V A P ++AA+A  LA IGST+ AANAAA APT GVLAAG D+VSA +A+LF   AQ
Sbjct  1    MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVS  106
            AYQ +  QAA FH+RF+Q L   A AY  AEAANA PLQ+A  V++
Sbjct  61   AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVIN  106


>gi|313657701|ref|ZP_07814581.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN V2475]
Length=406

 Score =  108 bits (271),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 66/114 (58%), Positives = 80/114 (71%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            MS+V A P ++AA+A  LA IGST+ AANAAA APT GVLAAG D+VSA +A+LF   AQ
Sbjct  1    MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
            AYQ +  QAA FH+RF+Q L   A AY  AEAANA PLQ+A  V++   Q   G
Sbjct  61   AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLG  114


>gi|254231180|ref|ZP_04924507.1| PE-PGRS family protein [Mycobacterium tuberculosis C]
 gi|124600239|gb|EAY59249.1| PE-PGRS family protein [Mycobacterium tuberculosis C]
Length=417

 Score =  108 bits (271),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 66/114 (58%), Positives = 80/114 (71%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            MS+V A P ++AA+A  LA IGST+ AANAAA APT GVLAAG D+VSA +A+LF   AQ
Sbjct  1    MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
            AYQ +  QAA FH+RF+Q L   A AY  AEAANA PLQ+A  V++   Q   G
Sbjct  61   AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLG  114


>gi|118619548|ref|YP_907880.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
 gi|118571658|gb|ABL06409.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
Length=350

 Score =  108 bits (269),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 66/114 (58%), Positives = 83/114 (73%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            MS + AAP+ +AA A +LA+IGS++ AA+ AAAAPT G+LAAG D+VS  IA +F A AQ
Sbjct  1    MSFLYAAPDFVAAGATDLASIGSSINAASVAAAAPTTGILAAGSDEVSTAIAGMFAAHAQ  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
            AYQA+S QA LFH +FVQ+L  GA+AY  AEAANA PLQ     V+  +Q  TG
Sbjct  61   AYQALSTQADLFHAQFVQLLNSGASAYTGAEAANASPLQPVLDAVNAPSQALTG  114


>gi|183984531|ref|YP_001852822.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183177857|gb|ACC42967.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=569

 Score =  107 bits (268),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 64/114 (57%), Positives = 84/114 (74%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            MS++ AAP ++A++A +LA IGS++ AA+ AAAAPT GVLAAG D++SA +A +F A AQ
Sbjct  1    MSYLFAAPELVASAATDLAGIGSSINAASVAAAAPTTGVLAAGADEISAAVAGMFAAHAQ  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
            AYQA+S QA  FH +FVQ+L  GA+AY  AEAAN  PLQ+A   V+   Q  TG
Sbjct  61   AYQALSQQADTFHAQFVQLLNSGASAYTGAEAANVSPLQQALDAVNAPVQQLTG  114


>gi|183985312|ref|YP_001853603.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183178638|gb|ACC43748.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=846

 Score =  105 bits (263),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 58/101 (58%), Positives = 75/101 (75%), Gaps = 1/101 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAA-GGDDVSAGIAALFGARA  59
            MS+V A+P VL A+A E++ IGS+++ ANA+AAAPT  +L+A G D+VSA + A+FG  A
Sbjct  1    MSYVFASPEVLNAAAAEVSTIGSSLQTANASAAAPTTALLSALGADEVSAAVTAMFGNHA  60

Query  60   QAYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQK  100
            QAYQA+S QAA FHDRFV  L  GA AY+ AEA+ A  LQ 
Sbjct  61   QAYQAVSTQAAEFHDRFVAALTAGADAYSSAEASTAATLQS  101


>gi|340625955|ref|YP_004744407.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
 gi|340004145|emb|CCC43283.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=470

 Score =  102 bits (254),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 77/134 (58%), Positives = 91/134 (68%), Gaps = 2/134 (1%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            MS V AAP  +AA+A +LA IGST+  ANAAAAAP   VL AG D+VSAGIAALF A AQ
Sbjct  1    MSWVIAAPEYVAAAANDLAGIGSTISQANAAAAAPITAVLPAGADEVSAGIAALFSAHAQ  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQ  120
            AYQ +SAQAALFH +FV ++  GA  YA  EA NALP+Q+AQ + ++     TG    G 
Sbjct  61   AYQVLSAQAALFHQQFVALMSAGAGQYATTEALNALPMQQAQALATDPVLALTGRPLIG-  119

Query  121  SRGAGGFGGVGQAG  134
              GA G  G GQAG
Sbjct  120  -NGANGAPGTGQAG  132


>gi|306798777|ref|ZP_07437079.1| putative PE family protein [Mycobacterium tuberculosis SUMu006]
 gi|308340988|gb|EFP29839.1| putative PE family protein [Mycobacterium tuberculosis SUMu006]
Length=354

 Score = 98.6 bits (244),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 71/164 (44%), Positives = 86/164 (53%), Gaps = 36/164 (21%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            M +V A+P+++ A+A  LA IGS +  AN AAA PT  V+AA  D+VS  IAALFGA A+
Sbjct  1    MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQ  120
            +YQ +S QAA FH RFVQ L   AA+YA  EAANA PLQ A  V++  AQ          
Sbjct  61   SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQT---------  111

Query  121  SRGAGGFGGVGQAGGKGWDGGP-IGNGQVGEQHGAGQLGSTDGN  163
                               G P IGNG  G         ST G 
Sbjct  112  -----------------LLGRPLIGNGADG---------STPGQ  129


>gi|183982655|ref|YP_001850946.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183175981|gb|ACC41091.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=625

 Score = 96.7 bits (239),  Expect = 7e-18, Method: Compositional matrix adjust.
 Identities = 65/106 (62%), Positives = 87/106 (83%), Gaps = 0/106 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            MS++ AAP ++AA+A +LA++GS++ AANAAAAAPT  VLAAG D+VSA +AALF A AQ
Sbjct  1    MSYLIAAPEMVAAAATDLASVGSSISAANAAAAAPTMSVLAAGADEVSAVVAALFDAHAQ  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVS  106
            AYQ++SAQAALFH++FVQ L  GA +YA+AEAA+  PLQ A  +++
Sbjct  61   AYQSLSAQAALFHEQFVQALNAGAGSYALAEAASVSPLQDALNLIN  106


>gi|240173275|ref|ZP_04751933.1| PE-PGRS family protein [Mycobacterium kansasii ATCC 12478]
Length=370

 Score = 96.3 bits (238),  Expect = 9e-18, Method: Compositional matrix adjust.
 Identities = 67/114 (59%), Positives = 82/114 (72%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            MS V AAP  +AA+A +LA IGST+  AN AA AP +GVL AG D+VS  I+ALF A AQ
Sbjct  1    MSWVIAAPEYVAAAANDLAGIGSTLSQANMAALAPISGVLPAGADEVSFAISALFDAHAQ  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
            AYQA+SAQAALFH +FVQ++  GA  YA AEAAN LP+Q A   +++  Q  TG
Sbjct  61   AYQALSAQAALFHQQFVQLMSGGAGQYAAAEAANVLPMQVAAAAINDPVQALTG  114


>gi|183984370|ref|YP_001852661.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183177696|gb|ACC42806.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=910

 Score = 96.3 bits (238),  Expect = 9e-18, Method: Compositional matrix adjust.
 Identities = 61/114 (54%), Positives = 77/114 (68%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            MS+V A P+++A +A ELA +GST+  A  AAAA T GVLAA GD+VSA IAA+F A  Q
Sbjct  1    MSYVIAVPDLVAGAASELAGVGSTLSTATTAAAAQTTGVLAAAGDEVSAAIAAVFSAHGQ  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
            +YQ +SAQA  FH +FVQ L  GA+AY  AEAA+A PL      ++   Q  TG
Sbjct  61   SYQTLSAQAETFHAQFVQALSAGASAYTQAEAASASPLAGLLAAINAPVQSLTG  114


>gi|340627504|ref|YP_004745956.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
 gi|340005694|emb|CCC44860.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=1660

 Score = 95.9 bits (237),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 60/114 (53%), Positives = 74/114 (65%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            MS+V A P ++A +A +LA IGS + AA+A AA PT  V+AAG D+VSAGIAALF A AQ
Sbjct  1    MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
             YQA+SAQAA FHD+FV  L   A  Y   E ANA  ++   G V+   Q   G
Sbjct  61   EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRAVLGAVNAPTQTLLG  114


>gi|339632516|ref|YP_004724158.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
 gi|339331872|emb|CCC27575.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=1657

 Score = 95.9 bits (237),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 60/114 (53%), Positives = 74/114 (65%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            MS+V A P ++A +A +LA IGS + AA+A AA PT  V+AAG D+VSAGIAALF A AQ
Sbjct  1    MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
             YQA+SAQAA FHD+FV  L   A  Y   E ANA  ++   G V+   Q   G
Sbjct  61   EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLG  114


>gi|344220317|gb|AEN00948.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=1644

 Score = 95.9 bits (237),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 60/114 (53%), Positives = 74/114 (65%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            MS+V A P ++A +A +LA IGS + AA+A AA PT  V+AAG D+VSAGIAALF A AQ
Sbjct  1    MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
             YQA+SAQAA FHD+FV  L   A  Y   E ANA  ++   G V+   Q   G
Sbjct  61   EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLG  114


>gi|57116996|ref|YP_177887.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
 gi|148662325|ref|YP_001283848.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
 gi|7441223|pir||A70869 hypothetical glycine-rich protein Rv2490c - Mycobacterium tuberculosis 
(strain H37RV)
 gi|41353424|emb|CAE55496.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|148506477|gb|ABQ74286.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=1660

 Score = 95.9 bits (237),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 60/114 (53%), Positives = 74/114 (65%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            MS+V A P ++A +A +LA IGS + AA+A AA PT  V+AAG D+VSAGIAALF A AQ
Sbjct  1    MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
             YQA+SAQAA FHD+FV  L   A  Y   E ANA  ++   G V+   Q   G
Sbjct  61   EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLG  114


>gi|183984530|ref|YP_001852821.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183177856|gb|ACC42966.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=353

 Score = 95.9 bits (237),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 58/98 (60%), Positives = 72/98 (74%), Gaps = 0/98 (0%)

Query  17   ELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQAYQAISAQAALFHDRF  76
            +LA+IGS++ AA+ AAAAPT G+LAAG D+VS  IA +F A AQAYQA+S QA LFH +F
Sbjct  17   DLASIGSSINAASVAAAAPTTGILAAGSDEVSTAIAGMFAAHAQAYQALSTQADLFHAQF  76

Query  77   VQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
            VQ+L  GA+AY  AEAANA PLQ     V+  +Q  TG
Sbjct  77   VQLLNSGASAYTGAEAANASPLQPVLDAVNAPSQALTG  114


>gi|15842017|ref|NP_337054.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
 gi|13882294|gb|AAK46868.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=1665

 Score = 95.5 bits (236),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 60/114 (53%), Positives = 74/114 (65%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            MS+V A P ++A +A +LA IGS + AA+A AA PT  V+AAG D+VSAGIAALF A AQ
Sbjct  6    MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ  65

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
             YQA+SAQAA FHD+FV  L   A  Y   E ANA  ++   G V+   Q   G
Sbjct  66   EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLG  119


>gi|253798432|ref|YP_003031433.1| hypothetical protein TBMG_04024 [Mycobacterium tuberculosis KZN 
1435]
 gi|253319935|gb|ACT24538.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|328458200|gb|AEB03623.1| hypothetical protein TBSG_01494 [Mycobacterium tuberculosis KZN 
4207]
Length=1616

 Score = 95.5 bits (236),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 60/114 (53%), Positives = 74/114 (65%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            MS+V A P ++A +A +LA IGS + AA+A AA PT  V+AAG D+VSAGIAALF A AQ
Sbjct  1    MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ  60

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
             YQA+SAQAA FHD+FV  L   A  Y   E ANA  ++   G V+   Q   G
Sbjct  61   EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLG  114


>gi|289553720|ref|ZP_06442930.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis 
KZN 605]
 gi|289438352|gb|EFD20845.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis 
KZN 605]
Length=1323

 Score = 95.5 bits (236),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 60/114 (53%), Positives = 74/114 (65%), Gaps = 0/114 (0%)

Query  1    MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ  60
            MS+V A P ++A +A +LA IGS + AA+A AA PT  V+AAG D+VSAGIAALF A AQ
Sbjct  6    MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ  65

Query  61   AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTG  114
             YQA+SAQAA FHD+FV  L   A  Y   E ANA  ++   G V+   Q   G
Sbjct  66   EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLG  119



Lambda     K      H
   0.310    0.130    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 828519148872


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40