BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2342
Length=85
Score E
Sequences producing significant alignments: (Bits) Value
gi|15841849|ref|NP_336886.1| hypothetical protein MT2407 [Mycoba... 168 3e-40
gi|15609479|ref|NP_216858.1| hypothetical protein Rv2342 [Mycoba... 167 5e-40
gi|340627353|ref|YP_004745805.1| hypothetical protein MCAN_23741... 165 2e-39
gi|167969898|ref|ZP_02552175.1| hypothetical protein MtubH3_1846... 155 1e-36
gi|240170986|ref|ZP_04749645.1| hypothetical protein MkanA1_1686... 138 3e-31
gi|254819370|ref|ZP_05224371.1| hypothetical protein MintA_05570... 134 5e-30
gi|296166326|ref|ZP_06848763.1| conserved hypothetical protein [... 132 2e-29
gi|118617125|ref|YP_905457.1| hypothetical protein MUL_1460 [Myc... 130 6e-29
gi|342857478|ref|ZP_08714134.1| hypothetical protein MCOL_01340 ... 129 2e-28
gi|118466919|ref|YP_881263.1| hypothetical protein MAV_2044 [Myc... 125 2e-27
gi|41408227|ref|NP_961063.1| hypothetical protein MAP2129 [Mycob... 125 3e-27
gi|254774770|ref|ZP_05216286.1| hypothetical protein MaviaA2_088... 124 4e-27
gi|15827367|ref|NP_301630.1| hypothetical protein ML0834 [Mycoba... 124 6e-27
gi|108800406|ref|YP_640603.1| hypothetical protein Mmcs_3440 [My... 102 1e-20
gi|118469010|ref|YP_888751.1| hypothetical protein MSMEG_4479 [M... 102 2e-20
gi|120404770|ref|YP_954599.1| hypothetical protein Mvan_3812 [My... 98.2 4e-19
gi|145223311|ref|YP_001133989.1| hypothetical protein Mflv_2724 ... 93.6 9e-18
gi|169628799|ref|YP_001702448.1| hypothetical protein MAB_1709c ... 83.6 9e-15
gi|333990216|ref|YP_004522830.1| hypothetical protein JDM601_157... 79.0 2e-13
gi|296140432|ref|YP_003647675.1| hypothetical protein Tpau_2738 ... 74.7 4e-12
gi|54023438|ref|YP_117680.1| hypothetical protein nfa14710 [Noca... 64.7 4e-09
gi|333918888|ref|YP_004492469.1| hypothetical protein AS9A_1217 ... 60.5 9e-08
gi|227488424|ref|ZP_03918740.1| conserved hypothetical protein [... 58.5 3e-07
gi|296119843|ref|ZP_06838397.1| conserved hypothetical protein [... 58.2 4e-07
gi|337291214|ref|YP_004630235.1| hypothetical protein CULC22_016... 58.2 4e-07
gi|312140267|ref|YP_004007603.1| hypothetical protein REQ_29060 ... 57.4 7e-07
gi|38234268|ref|NP_940035.1| hypothetical protein DIP1697 [Coryn... 57.0 9e-07
gi|237785264|ref|YP_002905969.1| hypothetical protein ckrop_0665... 56.6 1e-06
gi|300858929|ref|YP_003783912.1| hypothetical protein cpfrc_0151... 56.2 1e-06
gi|172040996|ref|YP_001800710.1| hypothetical protein cur_1316 [... 55.5 3e-06
gi|306836612|ref|ZP_07469579.1| conserved hypothetical protein [... 55.1 3e-06
gi|227503147|ref|ZP_03933196.1| conserved hypothetical protein [... 55.1 4e-06
gi|334563188|ref|ZP_08516179.1| hypothetical protein CbovD2_0132... 55.1 4e-06
gi|255323756|ref|ZP_05364884.1| conserved hypothetical protein [... 54.7 5e-06
gi|226307184|ref|YP_002767144.1| hypothetical protein RER_36970 ... 54.3 6e-06
gi|225021803|ref|ZP_03710995.1| hypothetical protein CORMATOL_01... 54.3 6e-06
gi|300780738|ref|ZP_07090592.1| conserved hypothetical protein [... 54.3 6e-06
gi|19553465|ref|NP_601467.1| hypothetical protein NCgl2187 [Cory... 53.9 7e-06
gi|145296222|ref|YP_001139043.1| hypothetical protein cgR_2139 [... 53.9 7e-06
gi|227548818|ref|ZP_03978867.1| conserved hypothetical protein [... 53.5 9e-06
gi|68535707|ref|YP_250412.1| hypothetical protein jk0635 [Coryne... 53.5 1e-05
gi|227833614|ref|YP_002835321.1| hypothetical protein cauri_1790... 52.8 2e-05
gi|227504573|ref|ZP_03934622.1| conserved hypothetical protein [... 52.4 2e-05
gi|25028724|ref|NP_738778.1| hypothetical protein CE2168 [Coryne... 51.6 4e-05
gi|111018223|ref|YP_701195.1| hypothetical protein RHA1_ro01213 ... 51.2 5e-05
gi|226360348|ref|YP_002778126.1| hypothetical protein ROP_09340 ... 50.4 9e-05
gi|72161275|ref|YP_288932.1| hypothetical protein Tfu_0871 [Ther... 47.8 6e-04
gi|297559744|ref|YP_003678718.1| hypothetical protein Ndas_0767 ... 45.4 0.003
gi|340530024|gb|AEK45229.1| hypothetical protein RAM_33780 [Amyc... 44.7 0.004
gi|333027303|ref|ZP_08455367.1| putative secreted protein [Strep... 44.7 0.005
>gi|15841849|ref|NP_336886.1| hypothetical protein MT2407 [Mycobacterium tuberculosis CDC1551]
gi|148823543|ref|YP_001288297.1| hypothetical protein TBFG_12366 [Mycobacterium tuberculosis F11]
gi|253798584|ref|YP_003031585.1| hypothetical protein TBMG_01636 [Mycobacterium tuberculosis KZN
1435]
18 more sequence titles
Length=97
Score = 168 bits (425), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/85 (100%), Positives = 85/85 (100%), Gaps = 0/85 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF 60
LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF
Sbjct 13 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF 72
Query 61 VTLAEIDNQTAVVQRGVERQPKTAR 85
VTLAEIDNQTAVVQRGVERQPKTAR
Sbjct 73 VTLAEIDNQTAVVQRGVERQPKTAR 97
>gi|15609479|ref|NP_216858.1| hypothetical protein Rv2342 [Mycobacterium tuberculosis H37Rv]
gi|31793527|ref|NP_856020.1| hypothetical protein Mb2371 [Mycobacterium bovis AF2122/97]
gi|121638230|ref|YP_978454.1| hypothetical protein BCG_2365 [Mycobacterium bovis BCG str. Pasteur
1173P2]
54 more sequence titles
Length=85
Score = 167 bits (423), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 84/85 (99%), Positives = 85/85 (100%), Gaps = 0/85 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF 60
+IGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF
Sbjct 1 MIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF 60
Query 61 VTLAEIDNQTAVVQRGVERQPKTAR 85
VTLAEIDNQTAVVQRGVERQPKTAR
Sbjct 61 VTLAEIDNQTAVVQRGVERQPKTAR 85
>gi|340627353|ref|YP_004745805.1| hypothetical protein MCAN_23741 [Mycobacterium canettii CIPT
140010059]
gi|340005543|emb|CCC44705.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=85
Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/85 (98%), Positives = 84/85 (99%), Gaps = 0/85 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF 60
+IGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF
Sbjct 1 MIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF 60
Query 61 VTLAEIDNQTAVVQRGVERQPKTAR 85
VTLAEIDNQ AVVQRGVERQPKTAR
Sbjct 61 VTLAEIDNQAAVVQRGVERQPKTAR 85
>gi|167969898|ref|ZP_02552175.1| hypothetical protein MtubH3_18469 [Mycobacterium tuberculosis
H37Ra]
Length=79
Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/79 (99%), Positives = 79/79 (100%), Gaps = 0/79 (0%)
Query 7 VLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGFVTLAEI 66
+LGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGFVTLAEI
Sbjct 1 MLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGFVTLAEI 60
Query 67 DNQTAVVQRGVERQPKTAR 85
DNQTAVVQRGVERQPKTAR
Sbjct 61 DNQTAVVQRGVERQPKTAR 79
>gi|240170986|ref|ZP_04749645.1| hypothetical protein MkanA1_16868 [Mycobacterium kansasii ATCC
12478]
Length=100
Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/88 (80%), Positives = 77/88 (88%), Gaps = 6/88 (6%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF 60
LIGYVAVLG+GYVLGAKAGRRRY+QIA TYRALTGSPVARSMIEGGRRKIANRISPD+GF
Sbjct 13 LIGYVAVLGIGYVLGAKAGRRRYQQIAGTYRALTGSPVARSMIEGGRRKIANRISPDSGF 72
Query 61 VTLAEIDNQTAVVQRG------VERQPK 82
VT+ EID QTA+++R VERQ K
Sbjct 73 VTVTEIDEQTAIIERAERVERVVERQAK 100
>gi|254819370|ref|ZP_05224371.1| hypothetical protein MintA_05570 [Mycobacterium intracellulare
ATCC 13950]
Length=92
Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/81 (81%), Positives = 73/81 (91%), Gaps = 0/81 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF 60
+I YV VLGLGYVLG+KAGRRRYEQI TYRALT SPVA+SMIEGGRRKIANRISPDAGF
Sbjct 1 MIRYVVVLGLGYVLGSKAGRRRYEQIVGTYRALTSSPVAKSMIEGGRRKIANRISPDAGF 60
Query 61 VTLAEIDNQTAVVQRGVERQP 81
VTLA+ID+QTA+++R VE P
Sbjct 61 VTLAQIDDQTAIMERDVEPLP 81
>gi|296166326|ref|ZP_06848763.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898335|gb|EFG77904.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=102
Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/84 (77%), Positives = 73/84 (87%), Gaps = 0/84 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF 60
LI YV VLGLGYVLG+KAGRRRYEQI TYRALT SPVA+SMIEGGRRK+A+RISPD GF
Sbjct 11 LIRYVVVLGLGYVLGSKAGRRRYEQIVGTYRALTSSPVAKSMIEGGRRKVASRISPDTGF 70
Query 61 VTLAEIDNQTAVVQRGVERQPKTA 84
VT+AEID+QTA+++RG ER A
Sbjct 71 VTVAEIDDQTAIMERGAERAADEA 94
>gi|118617125|ref|YP_905457.1| hypothetical protein MUL_1460 [Mycobacterium ulcerans Agy99]
gi|183983629|ref|YP_001851920.1| hypothetical protein MMAR_3649 [Mycobacterium marinum M]
gi|118569235|gb|ABL03986.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
gi|183176955|gb|ACC42065.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=81
Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/84 (78%), Positives = 73/84 (87%), Gaps = 4/84 (4%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF 60
+IGYVA+LGLGYVLGAKAGRRRYEQIA TYRALTGSP A+++I+ GRRKIANR+SPD+GF
Sbjct 1 MIGYVALLGLGYVLGAKAGRRRYEQIAGTYRALTGSPAAKTVIDAGRRKIANRVSPDSGF 60
Query 61 VTLAEIDNQTAVVQRGVERQPKTA 84
VTL EID QT V VERQPK A
Sbjct 61 VTLTEIDTQTVV----VERQPKAA 80
>gi|342857478|ref|ZP_08714134.1| hypothetical protein MCOL_01340 [Mycobacterium colombiense CECT
3035]
gi|342134811|gb|EGT87977.1| hypothetical protein MCOL_01340 [Mycobacterium colombiense CECT
3035]
Length=92
Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/78 (79%), Positives = 71/78 (92%), Gaps = 0/78 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF 60
+I YV VLGLGYVLG+KAGRRRYEQ+ TYRALT SPVA+SMIEGGRRK+ANRISPDAGF
Sbjct 1 MIRYVVVLGLGYVLGSKAGRRRYEQLVGTYRALTSSPVAKSMIEGGRRKVANRISPDAGF 60
Query 61 VTLAEIDNQTAVVQRGVE 78
VTL EID++TA+++R VE
Sbjct 61 VTLTEIDDRTAIMERDVE 78
>gi|118466919|ref|YP_881263.1| hypothetical protein MAV_2044 [Mycobacterium avium 104]
gi|118168206|gb|ABK69103.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=91
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/78 (79%), Positives = 71/78 (92%), Gaps = 0/78 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF 60
+I YV VLGLGYVLG+KAGRRRYEQI TYRALT SPVA+S+IEGGRRKIANRISPDAGF
Sbjct 1 MIRYVVVLGLGYVLGSKAGRRRYEQIVGTYRALTSSPVAKSVIEGGRRKIANRISPDAGF 60
Query 61 VTLAEIDNQTAVVQRGVE 78
VTLA+ID++TA+++R E
Sbjct 61 VTLAQIDDRTAIMEREAE 78
>gi|41408227|ref|NP_961063.1| hypothetical protein MAP2129 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396582|gb|AAS04446.1| hypothetical protein MAP_2129 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=101
Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/78 (79%), Positives = 70/78 (90%), Gaps = 0/78 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF 60
LI YV VLGLGYVLG+KAGRRRYEQI TYRALT SPVA+S+IEGGRRKIANRISPDAGF
Sbjct 11 LIRYVVVLGLGYVLGSKAGRRRYEQIVGTYRALTSSPVAKSVIEGGRRKIANRISPDAGF 70
Query 61 VTLAEIDNQTAVVQRGVE 78
VTL +ID++TA+++R E
Sbjct 71 VTLTQIDDRTAIMEREAE 88
>gi|254774770|ref|ZP_05216286.1| hypothetical protein MaviaA2_08873 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|336461675|gb|EGO40538.1| hypothetical protein MAPs_28380 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=91
Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/78 (77%), Positives = 70/78 (90%), Gaps = 0/78 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF 60
+I YV VLGLGYVLG+KAGRRRYEQI TYRALT SPVA+S+IEGGRRKIANRISPDAGF
Sbjct 1 MIRYVVVLGLGYVLGSKAGRRRYEQIVGTYRALTSSPVAKSVIEGGRRKIANRISPDAGF 60
Query 61 VTLAEIDNQTAVVQRGVE 78
VTL +ID++TA+++R E
Sbjct 61 VTLTQIDDRTAIMEREAE 78
>gi|15827367|ref|NP_301630.1| hypothetical protein ML0834 [Mycobacterium leprae TN]
gi|221229844|ref|YP_002503260.1| hypothetical protein MLBr_00834 [Mycobacterium leprae Br4923]
gi|13092916|emb|CAC30344.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219932951|emb|CAR70929.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=100
Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 61/78 (79%), Positives = 66/78 (85%), Gaps = 0/78 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF 60
LI YV VLGLGYVLGAKAGRRRYEQI YR LTGSP+A+SMI GRRK+ANRISPD GF
Sbjct 16 LIRYVIVLGLGYVLGAKAGRRRYEQIVGIYRTLTGSPMAKSMIAEGRRKVANRISPDEGF 75
Query 61 VTLAEIDNQTAVVQRGVE 78
VTLAEIDNQT V++R E
Sbjct 76 VTLAEIDNQTTVIERSAE 93
>gi|108800406|ref|YP_640603.1| hypothetical protein Mmcs_3440 [Mycobacterium sp. MCS]
gi|119869535|ref|YP_939487.1| hypothetical protein Mkms_3503 [Mycobacterium sp. KMS]
gi|126436029|ref|YP_001071720.1| hypothetical protein Mjls_3451 [Mycobacterium sp. JLS]
gi|108770825|gb|ABG09547.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119695624|gb|ABL92697.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126235829|gb|ABN99229.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=81
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/74 (65%), Positives = 59/74 (80%), Gaps = 0/74 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF 60
+IGYVAV+ +GYVLG KAGRRRYEQIA TYRA+T SP AR++I+ RRKIA R+SPD
Sbjct 1 MIGYVAVMAVGYVLGTKAGRRRYEQIAGTYRAVTSSPAARAVIDTSRRKIAERVSPDPQL 60
Query 61 VTLAEIDNQTAVVQ 74
+TL ID QT V++
Sbjct 61 MTLTPIDEQTTVLR 74
>gi|118469010|ref|YP_888751.1| hypothetical protein MSMEG_4479 [Mycobacterium smegmatis str.
MC2 155]
gi|118170297|gb|ABK71193.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=89
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/74 (64%), Positives = 61/74 (83%), Gaps = 0/74 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF 60
+I Y AV+ +GYVLGAKAGRRRYEQIASTYRA+T +P R++I+ GRRKIA+R+SPD F
Sbjct 1 MIRYAAVIAVGYVLGAKAGRRRYEQIASTYRAVTSNPATRAVIDAGRRKIASRVSPDPQF 60
Query 61 VTLAEIDNQTAVVQ 74
VT+ ID +T+V+
Sbjct 61 VTMTPIDAETSVLS 74
>gi|120404770|ref|YP_954599.1| hypothetical protein Mvan_3812 [Mycobacterium vanbaalenii PYR-1]
gi|119957588|gb|ABM14593.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=99
Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/74 (63%), Positives = 58/74 (79%), Gaps = 0/74 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF 60
+IGYVA +GYVLG KAGRRR+EQI+ TYRA+TGSP A+++IE GRRKIA R+SPD
Sbjct 17 VIGYVAAAAVGYVLGTKAGRRRFEQISGTYRAVTGSPAAKAVIEAGRRKIAERVSPDPAM 76
Query 61 VTLAEIDNQTAVVQ 74
V L ID+ T V++
Sbjct 77 VKLTRIDSGTEVLE 90
>gi|145223311|ref|YP_001133989.1| hypothetical protein Mflv_2724 [Mycobacterium gilvum PYR-GCK]
gi|315443771|ref|YP_004076650.1| hypothetical protein Mspyr1_21610 [Mycobacterium sp. Spyr1]
gi|145215797|gb|ABP45201.1| hypothetical protein Mflv_2724 [Mycobacterium gilvum PYR-GCK]
gi|315262074|gb|ADT98815.1| hypothetical protein Mspyr1_21610 [Mycobacterium sp. Spyr1]
Length=87
Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/74 (59%), Positives = 57/74 (78%), Gaps = 0/74 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF 60
+IGYVA +GYVLG KAGRRR+EQI+ TYRA+T SP A+++++ GRRKIA R+SPD
Sbjct 1 MIGYVAAAAVGYVLGTKAGRRRFEQISGTYRAVTESPAAKAVLDAGRRKIAERVSPDPAM 60
Query 61 VTLAEIDNQTAVVQ 74
V L ID+ T V++
Sbjct 61 VKLTRIDSGTEVLE 74
>gi|169628799|ref|YP_001702448.1| hypothetical protein MAB_1709c [Mycobacterium abscessus ATCC
19977]
gi|169240766|emb|CAM61794.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=82
Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/74 (53%), Positives = 52/74 (71%), Gaps = 0/74 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF 60
+I + VL GYVLGAKAGRRRYEQI + Y+A+TGSP + +IE RR++AN +SPD
Sbjct 1 MIRVLLVLAAGYVLGAKAGRRRYEQIVNGYQAVTGSPATKKLIEISRRRLANSLSPDPHM 60
Query 61 VTLAEIDNQTAVVQ 74
V L ID T +++
Sbjct 61 VELTPIDETTMILE 74
>gi|333990216|ref|YP_004522830.1| hypothetical protein JDM601_1576 [Mycobacterium sp. JDM601]
gi|333486184|gb|AEF35576.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=84
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/59 (63%), Positives = 46/59 (78%), Gaps = 0/59 (0%)
Query 16 AKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGFVTLAEIDNQTAVVQ 74
KAGRRRYEQI TY ALT SP+A+S+I+ GRR IANRI PD VTL E+++ TAV++
Sbjct 16 TKAGRRRYEQIVGTYHALTSSPIAKSVIDKGRRSIANRIHPDQKMVTLTELEDGTAVLR 74
>gi|296140432|ref|YP_003647675.1| hypothetical protein Tpau_2738 [Tsukamurella paurometabola DSM
20162]
gi|296028566|gb|ADG79336.1| conserved hypothetical protein [Tsukamurella paurometabola DSM
20162]
Length=80
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/72 (52%), Positives = 48/72 (67%), Gaps = 0/72 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF 60
+I V G GYVLG KAGRRRYEQI T +A+ SPV + +E GRRK+++ ++PD
Sbjct 1 MIRLVIAAGAGYVLGTKAGRRRYEQINRTAKAIATSPVTKKAVEVGRRKLSDSLNPDPKM 60
Query 61 VTLAEIDNQTAV 72
TL EID +T V
Sbjct 61 RTLREIDAETVV 72
>gi|54023438|ref|YP_117680.1| hypothetical protein nfa14710 [Nocardia farcinica IFM 10152]
gi|54014946|dbj|BAD56316.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=84
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/73 (46%), Positives = 49/73 (68%), Gaps = 4/73 (5%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF 60
LIG A GYVLG+KAGR RYEQI++ RA+TGSPV R ++ GR+K+++++S
Sbjct 5 LIGVAA----GYVLGSKAGRARYEQISAATRAVTGSPVTRKLVLVGRQKLSDKLSTRPQL 60
Query 61 VTLAEIDNQTAVV 73
+ +D +T V+
Sbjct 61 EPMVPLDERTTVL 73
>gi|333918888|ref|YP_004492469.1| hypothetical protein AS9A_1217 [Amycolicicoccus subflavus DQS3-9A1]
gi|333481109|gb|AEF39669.1| hypothetical protein AS9A_1217 [Amycolicicoccus subflavus DQS3-9A1]
Length=90
Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/72 (41%), Positives = 46/72 (64%), Gaps = 0/72 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF 60
+IG + + GYVLG +AGR R+EQI+ T R + SP + IE GR+K+++ +S
Sbjct 1 MIGLLVGVAAGYVLGTRAGRERFEQISRTARTVATSPATKKAIEVGRQKLSDALSTTPKL 60
Query 61 VTLAEIDNQTAV 72
+A+ID+ T+V
Sbjct 61 ERIADIDDSTSV 72
>gi|227488424|ref|ZP_03918740.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227543036|ref|ZP_03973085.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51866]
gi|227091638|gb|EEI26950.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227181258|gb|EEI62230.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51866]
Length=82
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/57 (46%), Positives = 38/57 (67%), Gaps = 0/57 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPD 57
+I +V GYVLG KAGR+R++QI Y A SPVA++ ++ GR +ANR+ P+
Sbjct 3 MIQFVVGAAAGYVLGTKAGRKRFDQIKRAYTAAVNSPVAQNAVKAGRTALANRLDPN 59
>gi|296119843|ref|ZP_06838397.1| conserved hypothetical protein [Corynebacterium ammoniagenes
DSM 20306]
gi|295966997|gb|EFG80268.1| conserved hypothetical protein [Corynebacterium ammoniagenes
DSM 20306]
Length=89
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/67 (36%), Positives = 40/67 (60%), Gaps = 0/67 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF 60
+ +V GYVLG KAGR+R+ QI + Y SP+A++ ++ R+ IANR+ PD
Sbjct 1 MFQFVVGAAAGYVLGTKAGRKRFHQIKNAYEKTINSPMAKNAVKATRKTIANRLDPDPRM 60
Query 61 VTLAEID 67
+ +++
Sbjct 61 REIKDLN 67
>gi|337291214|ref|YP_004630235.1| hypothetical protein CULC22_01606 [Corynebacterium ulcerans BR-AD22]
gi|334697324|gb|AEG82121.1| hypothetical protein CULC809_01589 [Corynebacterium ulcerans
809]
gi|334699520|gb|AEG84316.1| hypothetical protein CULC22_01606 [Corynebacterium ulcerans BR-AD22]
Length=80
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/56 (49%), Positives = 35/56 (63%), Gaps = 0/56 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISP 56
+I +V GYV G KAGRRRYEQI Y+A SPV + +E R+ IAN++ P
Sbjct 1 MIQFVVGAAAGYVFGTKAGRRRYEQIKKGYQAAVSSPVTQKAVEVTRKAIANKLDP 56
>gi|312140267|ref|YP_004007603.1| hypothetical protein REQ_29060 [Rhodococcus equi 103S]
gi|325676986|ref|ZP_08156657.1| hypothetical protein HMPREF0724_14440 [Rhodococcus equi ATCC
33707]
gi|311889606|emb|CBH48923.1| conserved hypothetical protein [Rhodococcus equi 103S]
gi|325552148|gb|EGD21839.1| hypothetical protein HMPREF0724_14440 [Rhodococcus equi ATCC
33707]
Length=82
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/73 (40%), Positives = 43/73 (59%), Gaps = 4/73 (5%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF 60
L+G A GYVLG +AGR RYEQI+ +A+ SP + IE GR+K+++ +S
Sbjct 5 LVGVAA----GYVLGTRAGRARYEQISKAAKAVATSPATKKAIEVGRQKLSDSLSTQPKL 60
Query 61 VTLAEIDNQTAVV 73
+ ID QT ++
Sbjct 61 EPMKPIDEQTTIL 73
>gi|38234268|ref|NP_940035.1| hypothetical protein DIP1697 [Corynebacterium diphtheriae NCTC
13129]
gi|38200530|emb|CAE50226.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
Length=80
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/56 (47%), Positives = 33/56 (59%), Gaps = 0/56 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISP 56
+I +V GYV G KAGRRRYEQI Y+A SPV + R+ IAN++ P
Sbjct 1 MIQFVVGAAAGYVFGTKAGRRRYEQIKKGYQAAVSSPVTHKAVSATRKAIANKLDP 56
>gi|237785264|ref|YP_002905969.1| hypothetical protein ckrop_0665 [Corynebacterium kroppenstedtii
DSM 44385]
gi|237758176|gb|ACR17426.1| hypothetical protein ckrop_0665 [Corynebacterium kroppenstedtii
DSM 44385]
Length=87
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/57 (46%), Positives = 37/57 (65%), Gaps = 0/57 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPD 57
L ++A GYV+G KAGR+RY+QI Y A SPVA+S + GR+ +AN + P+
Sbjct 3 LTTFIAGATAGYVMGTKAGRKRYDQIRRGYEAAINSPVAKSALHAGRKALANALDPE 59
>gi|300858929|ref|YP_003783912.1| hypothetical protein cpfrc_01512 [Corynebacterium pseudotuberculosis
FRC41]
gi|300686383|gb|ADK29305.1| hypothetical protein cpfrc_01512 [Corynebacterium pseudotuberculosis
FRC41]
gi|302206629|gb|ADL10971.1| Hypothetical protein CpC231_1505 [Corynebacterium pseudotuberculosis
C231]
gi|302331178|gb|ADL21372.1| Hypothetical protein Cp1002_1502 [Corynebacterium pseudotuberculosis
1002]
gi|308276872|gb|ADO26771.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis
I19]
gi|341825315|gb|AEK92836.1| Hypothetical protein CpPAT10_1505 [Corynebacterium pseudotuberculosis
PAT10]
Length=80
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/56 (47%), Positives = 35/56 (63%), Gaps = 0/56 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISP 56
+I +V GYV G KAGRRRYEQI Y+A SPV + ++ R+ IAN++ P
Sbjct 1 MIQFVVGAAAGYVFGTKAGRRRYEQIKKGYQAAVSSPVTQKAMQVTRKAIANKLDP 56
>gi|172040996|ref|YP_001800710.1| hypothetical protein cur_1316 [Corynebacterium urealyticum DSM
7109]
gi|171852300|emb|CAQ05276.1| hypothetical protein cu1316 [Corynebacterium urealyticum DSM
7109]
Length=109
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/70 (39%), Positives = 40/70 (58%), Gaps = 0/70 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF 60
+I +V GY++G KAGRRRYEQI Y S VA+S + R+ +ANR+ PD
Sbjct 1 MIQFVVGAAAGYLMGTKAGRRRYEQIRRGYETAINSEVAQSALRASRKALANRLDPDPRM 60
Query 61 VTLAEIDNQT 70
+ +++ T
Sbjct 61 HEVRDLNAST 70
>gi|306836612|ref|ZP_07469579.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
gi|304567534|gb|EFM43132.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
Length=93
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/57 (41%), Positives = 34/57 (60%), Gaps = 0/57 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPD 57
+I +V GYV G KAGR+RY Q+ S Y+ SP +S + R+ +ANR+ P+
Sbjct 1 MIQFVFGAAAGYVFGTKAGRKRYHQMKSAYQKTVNSPATKSAVRSARKMVANRLDPE 57
>gi|227503147|ref|ZP_03933196.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49725]
gi|227076208|gb|EEI14171.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49725]
Length=93
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/57 (41%), Positives = 34/57 (60%), Gaps = 0/57 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPD 57
+I +V GYV G KAGR+RY Q+ S Y+ SP +S + R+ +ANR+ P+
Sbjct 1 MIQFVFGAAAGYVFGTKAGRKRYHQMKSAYQKTVNSPATKSAVRSARKMVANRLDPE 57
>gi|334563188|ref|ZP_08516179.1| hypothetical protein CbovD2_01326 [Corynebacterium bovis DSM
20582]
Length=142
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/57 (46%), Positives = 35/57 (62%), Gaps = 0/57 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPD 57
+I V GY++G KAGRRRYEQI Y A SP R+ + GR+ IA+R+ P+
Sbjct 37 MIQLVVGAAAGYLMGTKAGRRRYEQIRRGYEAAVNSPATRAAVRAGRKAIADRLDPE 93
>gi|255323756|ref|ZP_05364884.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
SK141]
gi|311741385|ref|ZP_07715209.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
gi|255299246|gb|EET78535.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
SK141]
gi|311303555|gb|EFQ79634.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
Length=93
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/57 (43%), Positives = 33/57 (58%), Gaps = 0/57 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPD 57
+I +V GYV G KAGR+RY QI Y SPV +S + R+ +ANR+ P+
Sbjct 1 MIQFVFGAAAGYVFGTKAGRKRYHQIKGAYEKAVNSPVTKSAVTSARKAVANRLDPE 57
>gi|226307184|ref|YP_002767144.1| hypothetical protein RER_36970 [Rhodococcus erythropolis PR4]
gi|229490237|ref|ZP_04384079.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|226186301|dbj|BAH34405.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
gi|229322769|gb|EEN88548.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=83
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/73 (37%), Positives = 43/73 (59%), Gaps = 4/73 (5%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF 60
LIG A GYVLG KAGR RYEQI+ +A+ SP + +++ R+K+A+ +S
Sbjct 5 LIGVAA----GYVLGTKAGRARYEQISRAAKAVATSPATKKVLDASRQKLADSLSTQPKL 60
Query 61 VTLAEIDNQTAVV 73
+ I+ +T ++
Sbjct 61 EPMKPINEETTIL 73
>gi|225021803|ref|ZP_03710995.1| hypothetical protein CORMATOL_01831 [Corynebacterium matruchotii
ATCC 33806]
gi|305681217|ref|ZP_07404024.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
14266]
gi|224945499|gb|EEG26708.1| hypothetical protein CORMATOL_01831 [Corynebacterium matruchotii
ATCC 33806]
gi|305659422|gb|EFM48922.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
14266]
Length=85
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/56 (43%), Positives = 33/56 (59%), Gaps = 0/56 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISP 56
+I +V GYV G KAGRRRYEQI Y+ SP + ++ R+ IAN++ P
Sbjct 1 MIQFVIGAAAGYVFGTKAGRRRYEQIKKGYQVAINSPATKQILTATRKAIANKLDP 56
>gi|300780738|ref|ZP_07090592.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
33030]
gi|300532445|gb|EFK53506.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
33030]
Length=87
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/57 (41%), Positives = 35/57 (62%), Gaps = 0/57 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPD 57
+I +V GYV G KAGR+RY QI T + + SPV + ++ R+ IAN++ P+
Sbjct 1 MIQFVVGAAAGYVFGTKAGRKRYHQIVDTTQKVVNSPVTQQVVRSTRKAIANQLDPE 57
>gi|19553465|ref|NP_601467.1| hypothetical protein NCgl2187 [Corynebacterium glutamicum ATCC
13032]
gi|62391108|ref|YP_226510.1| hypothetical protein cg2488 [Corynebacterium glutamicum ATCC
13032]
gi|21325038|dbj|BAB99660.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032]
gi|41326447|emb|CAF20609.1| conserved hypothetical protein [Corynebacterium glutamicum ATCC
13032]
Length=80
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (64%), Gaps = 0/46 (0%)
Query 11 GYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISP 56
GYVLG KAGR+RY QI Y A SP +S + R+ IAN++ P
Sbjct 11 GYVLGTKAGRKRYHQIKKGYEAAINSPATKSAVNAARKAIANKLDP 56
>gi|145296222|ref|YP_001139043.1| hypothetical protein cgR_2139 [Corynebacterium glutamicum R]
gi|140846142|dbj|BAF55141.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344044341|gb|EGV40019.1| hypothetical protein CgS9114_10342 [Corynebacterium glutamicum
S9114]
Length=80
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (64%), Gaps = 0/46 (0%)
Query 11 GYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISP 56
GYVLG KAGR+RY QI Y A SP +S + R+ IAN++ P
Sbjct 11 GYVLGTKAGRKRYHQIKKGYEAAINSPATKSAVNAARKAIANKLDP 56
>gi|227548818|ref|ZP_03978867.1| conserved hypothetical protein [Corynebacterium lipophiloflavum
DSM 44291]
gi|227079148|gb|EEI17111.1| conserved hypothetical protein [Corynebacterium lipophiloflavum
DSM 44291]
Length=95
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/57 (39%), Positives = 35/57 (62%), Gaps = 0/57 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPD 57
+I +V GYV G KAGR+RY QI RA+ SP+ + ++ R+ +AN++ P+
Sbjct 1 MIQFVVGAAAGYVFGTKAGRKRYHQIVDASRAVANSPITKQVVTSTRKALANQLDPE 57
>gi|68535707|ref|YP_250412.1| hypothetical protein jk0635 [Corynebacterium jeikeium K411]
gi|260578208|ref|ZP_05846127.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC
43734]
gi|68263306|emb|CAI36794.1| hypothetical protein jk0635 [Corynebacterium jeikeium K411]
gi|258603664|gb|EEW16922.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC
43734]
Length=104
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/70 (35%), Positives = 42/70 (60%), Gaps = 0/70 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF 60
+I V GY++G KAGRRRYEQI Y++ S + ++++ GR+ +ANR+ P+
Sbjct 1 MIQLVVGAAAGYLMGTKAGRRRYEQIRRGYQSAVNSDITKAVVRSGRKALANRLDPEPRM 60
Query 61 VTLAEIDNQT 70
+ +++ T
Sbjct 61 HEVRDLNRST 70
>gi|227833614|ref|YP_002835321.1| hypothetical protein cauri_1790 [Corynebacterium aurimucosum
ATCC 700975]
gi|262184616|ref|ZP_06044037.1| hypothetical protein CaurA7_11532 [Corynebacterium aurimucosum
ATCC 700975]
gi|227454630|gb|ACP33383.1| hypothetical protein cauri_1790 [Corynebacterium aurimucosum
ATCC 700975]
Length=94
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/57 (39%), Positives = 32/57 (57%), Gaps = 0/57 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPD 57
+I +V GYV G KAGR+RY QI Y SP ++ + R+ +ANR+ P+
Sbjct 1 MIQFVVGAAAGYVFGTKAGRKRYHQIKGAYEKAVNSPATKAAVRSARKAVANRLDPE 57
>gi|227504573|ref|ZP_03934622.1| conserved hypothetical protein [Corynebacterium striatum ATCC
6940]
gi|227198833|gb|EEI78881.1| conserved hypothetical protein [Corynebacterium striatum ATCC
6940]
Length=89
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/57 (39%), Positives = 33/57 (58%), Gaps = 0/57 (0%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPD 57
+I +V GYV G KAGR+RY QI Y SPV ++ + R+ +AN++ P+
Sbjct 1 MIQFVVGAAAGYVFGTKAGRKRYHQIKGAYEKAINSPVTKNALNATRKAVANKLDPE 57
>gi|25028724|ref|NP_738778.1| hypothetical protein CE2168 [Corynebacterium efficiens YS-314]
gi|259507785|ref|ZP_05750685.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|23494010|dbj|BAC18978.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259164578|gb|EEW49132.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length=80
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/47 (47%), Positives = 29/47 (62%), Gaps = 0/47 (0%)
Query 11 GYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPD 57
GYVLG KAGR+RY QI Y SP ++ + RR IAN++ P+
Sbjct 11 GYVLGTKAGRKRYHQIKKGYETAINSPATKAAVNATRRAIANKLDPE 57
>gi|111018223|ref|YP_701195.1| hypothetical protein RHA1_ro01213 [Rhodococcus jostii RHA1]
gi|110817753|gb|ABG93037.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=82
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/73 (33%), Positives = 43/73 (59%), Gaps = 4/73 (5%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF 60
LIG A GYVLG +AGR RYEQI+ +A+ SP + +++ R+K+++ ++
Sbjct 5 LIGIAA----GYVLGTRAGRARYEQISRATKAVATSPATKKVLQMSRQKLSDSLNTQPKL 60
Query 61 VTLAEIDNQTAVV 73
+ +D +T ++
Sbjct 61 EPMKPLDEETTIL 73
>gi|226360348|ref|YP_002778126.1| hypothetical protein ROP_09340 [Rhodococcus opacus B4]
gi|226238833|dbj|BAH49181.1| hypothetical protein [Rhodococcus opacus B4]
Length=82
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/73 (33%), Positives = 42/73 (58%), Gaps = 4/73 (5%)
Query 1 LIGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRISPDAGF 60
LIG A GYVLG +AGR RYEQI+ +A+ SP + +++ R+K+++ ++
Sbjct 5 LIGIAA----GYVLGTRAGRARYEQISRATKAVATSPATKKVLQMSRQKLSDSLNTQPKL 60
Query 61 VTLAEIDNQTAVV 73
+ +D T ++
Sbjct 61 EPMKPLDEDTTIL 73
>gi|72161275|ref|YP_288932.1| hypothetical protein Tfu_0871 [Thermobifida fusca YX]
gi|71915007|gb|AAZ54909.1| hypothetical protein Tfu_0871 [Thermobifida fusca YX]
Length=101
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/51 (44%), Positives = 32/51 (63%), Gaps = 0/51 (0%)
Query 2 IGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIAN 52
I ++A +GY+LGAKAGR RYEQIA R+L +P R + R ++ +
Sbjct 5 IVFIAGFAIGYILGAKAGRERYEQIARAARSLVENPTVRETADRVRSQVTD 55
>gi|297559744|ref|YP_003678718.1| hypothetical protein Ndas_0767 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844192|gb|ADH66212.1| hypothetical protein Ndas_0767 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length=113
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/41 (54%), Positives = 29/41 (71%), Gaps = 0/41 (0%)
Query 2 IGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSM 42
I + A L +GYVLGA+AGR RYEQ+A T R + SPV + +
Sbjct 5 ITFAAGLAIGYVLGARAGRARYEQLARTARKVADSPVVQEV 45
>gi|340530024|gb|AEK45229.1| hypothetical protein RAM_33780 [Amycolatopsis mediterranei S699]
Length=56
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/47 (49%), Positives = 29/47 (62%), Gaps = 0/47 (0%)
Query 9 GLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIEGGRRKIANRIS 55
GLGYVLGAKAGR RYEQ+ TYR + P+ + R KI ++
Sbjct 9 GLGYVLGAKAGRGRYEQLVRTYRRVVDHPMVQGAAGVARAKIGEKLK 55
>gi|333027303|ref|ZP_08455367.1| putative secreted protein [Streptomyces sp. Tu6071]
gi|332747155|gb|EGJ77596.1| putative secreted protein [Streptomyces sp. Tu6071]
Length=120
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/43 (49%), Positives = 28/43 (66%), Gaps = 0/43 (0%)
Query 2 IGYVAVLGLGYVLGAKAGRRRYEQIASTYRALTGSPVARSMIE 44
I + A LGYVLG KAGR RYEQ+A R ++ +P R++ E
Sbjct 28 IAFAAGAALGYVLGTKAGRERYEQLAKYARQVSHNPAVRNVTE 70
Lambda K H
0.320 0.136 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 131466506940
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40