BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2343c Length=639 Score E Sequences producing significant alignments: (Bits) Value gi|15609480|ref|NP_216859.1| DNA primase [Mycobacterium tubercul... 1297 0.0 gi|326903959|gb|EGE50892.1| DNA primase dnaG [Mycobacterium tube... 1296 0.0 gi|340627354|ref|YP_004745806.1| putative DNA primase DNAG [Myco... 1293 0.0 gi|121638231|ref|YP_978455.1| DNA primase [Mycobacterium bovis B... 1293 0.0 gi|183983630|ref|YP_001851921.1| DNA primase DnaG [Mycobacterium... 1101 0.0 gi|118617124|ref|YP_905456.1| DNA primase [Mycobacterium ulceran... 1100 0.0 gi|240170987|ref|ZP_04749646.1| DNA primase [Mycobacterium kansa... 1092 0.0 gi|296166325|ref|ZP_06848762.1| DNA primase [Mycobacterium paras... 1080 0.0 gi|254819371|ref|ZP_05224372.1| DNA primase [Mycobacterium intra... 1075 0.0 gi|118469474|ref|YP_888754.1| DNA primase [Mycobacterium smegmat... 1046 0.0 gi|339295247|gb|AEJ47358.1| DNA primase [Mycobacterium tuberculo... 1042 0.0 gi|342857479|ref|ZP_08714135.1| DNA primase [Mycobacterium colom... 1040 0.0 gi|41408228|ref|NP_961064.1| DNA primase [Mycobacterium avium su... 1023 0.0 gi|254774769|ref|ZP_05216285.1| DNA primase [Mycobacterium avium... 1021 0.0 gi|118467186|ref|YP_881262.1| DNA primase [Mycobacterium avium 1... 1020 0.0 gi|15827366|ref|NP_301629.1| DNA primase [Mycobacterium leprae T... 998 0.0 gi|120404772|ref|YP_954601.1| DNA primase [Mycobacterium vanbaal... 996 0.0 gi|333990215|ref|YP_004522829.1| DNA primase DnaG [Mycobacterium... 991 0.0 gi|169628798|ref|YP_001702447.1| DNA primase [Mycobacterium absc... 972 0.0 gi|126436031|ref|YP_001071722.1| DNA primase [Mycobacterium sp. ... 970 0.0 gi|108800408|ref|YP_640605.1| DNA primase [Mycobacterium sp. MCS... 967 0.0 gi|145223309|ref|YP_001133987.1| DNA primase [Mycobacterium gilv... 960 0.0 gi|343924088|ref|ZP_08763651.1| DNA primase [Gordonia alkanivora... 875 0.0 gi|111018224|ref|YP_701196.1| DNA primase [Rhodococcus jostii RH... 868 0.0 gi|312140268|ref|YP_004007604.1| DNA primase dnag [Rhodococcus e... 866 0.0 gi|262203033|ref|YP_003274241.1| DNA primase [Gordonia bronchial... 860 0.0 gi|229490245|ref|ZP_04384087.1| DNA primase [Rhodococcus erythro... 854 0.0 gi|226360349|ref|YP_002778127.1| DNA primase [Rhodococcus opacus... 853 0.0 gi|226307185|ref|YP_002767145.1| DNA primase [Rhodococcus erythr... 852 0.0 gi|333918887|ref|YP_004492468.1| DNA primase [Amycolicicoccus su... 848 0.0 gi|326381693|ref|ZP_08203387.1| DNA primase [Gordonia neofelifae... 837 0.0 gi|54023437|ref|YP_117679.1| DNA primase [Nocardia farcinica IFM... 829 0.0 gi|296140433|ref|YP_003647676.1| DNA primase [Tsukamurella pauro... 804 0.0 gi|300788424|ref|YP_003768715.1| DNA primase [Amycolatopsis medi... 786 0.0 gi|302528808|ref|ZP_07281150.1| DNA primase [Streptomyces sp. AA... 781 0.0 gi|319947857|ref|ZP_08022044.1| DNA primase [Dietzia cinnamea P4... 774 0.0 gi|256375413|ref|YP_003099073.1| DNA primase [Actinosynnema miru... 760 0.0 gi|145296223|ref|YP_001139044.1| DNA primase [Corynebacterium gl... 759 0.0 gi|19553466|ref|NP_601468.1| DNA primase [Corynebacterium glutam... 759 0.0 gi|25028725|ref|NP_738779.1| DNA primase [Corynebacterium effici... 757 0.0 gi|134098092|ref|YP_001103753.1| DNA primase [Saccharopolyspora ... 751 0.0 gi|38234270|ref|NP_940037.1| DNA primase [Corynebacterium diphth... 748 0.0 gi|213965824|ref|ZP_03394016.1| DNA primase [Corynebacterium amy... 746 0.0 gi|257055422|ref|YP_003133254.1| DNA primase [Saccharomonospora ... 743 0.0 gi|302331180|gb|ADL21374.1| DNA primase [Corynebacterium pseudot... 731 0.0 gi|300858931|ref|YP_003783914.1| DNA primase [Corynebacterium ps... 731 0.0 gi|337291216|ref|YP_004630237.1| DNA primase [Corynebacterium ul... 727 0.0 gi|334697326|gb|AEG82123.1| DNA primase [Corynebacterium ulceran... 727 0.0 gi|227833615|ref|YP_002835322.1| DNA primase [Corynebacterium au... 724 0.0 gi|311741384|ref|ZP_07715208.1| DNA primase [Corynebacterium pse... 722 0.0 >gi|15609480|ref|NP_216859.1| DNA primase [Mycobacterium tuberculosis H37Rv] gi|15841850|ref|NP_336887.1| DNA primase [Mycobacterium tuberculosis CDC1551] gi|31793528|ref|NP_856021.1| DNA primase [Mycobacterium bovis AF2122/97] 67 more sequence titles Length=639 Score = 1297 bits (3357), Expect = 0.0, Method: Compositional matrix adjust. Identities = 639/639 (100%), Positives = 639/639 (100%), Gaps = 0/639 (0%) Query 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF Sbjct 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 Query 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA 120 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA Sbjct 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA 120 Query 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF Sbjct 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 Query 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL Sbjct 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 Query 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML Sbjct 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 Query 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC Sbjct 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 Query 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR Sbjct 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 Query 421 QLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRPDPR 480 QLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRPDPR Sbjct 421 QLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRPDPR 480 Query 481 DPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQW 540 DPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQW Sbjct 481 DPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQW 540 Query 541 LDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKSKLQ 600 LDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKSKLQ Sbjct 541 LDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKSKLQ 600 Query 601 RMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA 639 RMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA Sbjct 601 RMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA 639 >gi|326903959|gb|EGE50892.1| DNA primase dnaG [Mycobacterium tuberculosis W-148] Length=639 Score = 1296 bits (3354), Expect = 0.0, Method: Compositional matrix adjust. Identities = 638/639 (99%), Positives = 639/639 (100%), Gaps = 0/639 (0%) Query 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF Sbjct 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 Query 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA 120 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA Sbjct 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA 120 Query 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF Sbjct 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 Query 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL Sbjct 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 Query 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVT+AVASCGTAFGGEHLAML Sbjct 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTSAVASCGTAFGGEHLAML 300 Query 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC Sbjct 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 Query 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR Sbjct 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 Query 421 QLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRPDPR 480 QLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRPDPR Sbjct 421 QLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRPDPR 480 Query 481 DPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQW 540 DPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQW Sbjct 481 DPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQW 540 Query 541 LDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKSKLQ 600 LDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKSKLQ Sbjct 541 LDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKSKLQ 600 Query 601 RMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA 639 RMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA Sbjct 601 RMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA 639 >gi|340627354|ref|YP_004745806.1| putative DNA primase DNAG [Mycobacterium canettii CIPT 140010059] gi|340005544|emb|CCC44706.1| putative DNA primase DNAG [Mycobacterium canettii CIPT 140010059] Length=639 Score = 1293 bits (3347), Expect = 0.0, Method: Compositional matrix adjust. Identities = 637/639 (99%), Positives = 638/639 (99%), Gaps = 0/639 (0%) Query 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF Sbjct 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 Query 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA 120 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA Sbjct 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA 120 Query 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF Sbjct 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 Query 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 +ELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL Sbjct 181 KELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 Query 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML Sbjct 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 Query 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC Sbjct 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 Query 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR Sbjct 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 Query 421 QLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRPDPR 480 QLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPP ELAVRPDPR Sbjct 421 QLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPAELAVRPDPR 480 Query 481 DPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQW 540 DPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQW Sbjct 481 DPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQW 540 Query 541 LDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKSKLQ 600 LDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKSKLQ Sbjct 541 LDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKSKLQ 600 Query 601 RMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA 639 RMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA Sbjct 601 RMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA 639 >gi|121638231|ref|YP_978455.1| DNA primase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990725|ref|YP_002645412.1| putative DNA primase [Mycobacterium bovis BCG str. Tokyo 172] gi|121493879|emb|CAL72354.1| Probable dna primase dnaG [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773838|dbj|BAH26644.1| putative DNA primase [Mycobacterium bovis BCG str. Tokyo 172] gi|341602269|emb|CCC64943.1| probable DNA primase dnaG [Mycobacterium bovis BCG str. Moreau RDJ] Length=639 Score = 1293 bits (3347), Expect = 0.0, Method: Compositional matrix adjust. Identities = 638/639 (99%), Positives = 638/639 (99%), Gaps = 0/639 (0%) Query 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF Sbjct 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 Query 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA 120 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA Sbjct 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA 120 Query 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF Sbjct 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 Query 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL Sbjct 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 Query 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML Sbjct 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 Query 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC Sbjct 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 Query 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR Sbjct 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 Query 421 QLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRPDPR 480 QLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRPDPR Sbjct 421 QLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRPDPR 480 Query 481 DPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQW 540 DPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQW Sbjct 481 DPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQW 540 Query 541 LDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKSKLQ 600 LDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWL RQIAEVKSKLQ Sbjct 541 LDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLRRQIAEVKSKLQ 600 Query 601 RMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA 639 RMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA Sbjct 601 RMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA 639 >gi|183983630|ref|YP_001851921.1| DNA primase DnaG [Mycobacterium marinum M] gi|183176956|gb|ACC42066.1| DNA primase DnaG [Mycobacterium marinum M] Length=656 Score = 1101 bits (2848), Expect = 0.0, Method: Compositional matrix adjust. Identities = 564/637 (89%), Positives = 587/637 (93%), Gaps = 1/637 (0%) Query 4 RISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHFHCF 63 RISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHFHCF Sbjct 20 RISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHFHCF 79 Query 64 GCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAANAA 123 GCGEGGDVYAF+QKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRL+AANAA Sbjct 80 GCGEGGDVYAFVQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLIAANAA 139 Query 124 AAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEFEEL 183 AAAFYA+AL+S EAA AR+YLTERSFDAAAA FGCGFAPSGWDSLTKHLQRKGFEF+EL Sbjct 140 AAAFYAEALESPEAALARKYLTERSFDAAAAHHFGCGFAPSGWDSLTKHLQRKGFEFKEL 199 Query 184 EAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETLLYK 243 EAAGLSRQGR GP+DRFHRRLLWPIR+SAGEV+GFGARRLFDDD M+AKYVNTPETLLYK Sbjct 200 EAAGLSRQGRRGPIDRFHRRLLWPIRSSAGEVIGFGARRLFDDDPMDAKYVNTPETLLYK 259 Query 244 KSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAMLRRL 303 KSSV+FGIDLAKRDIA+GHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFG EHLAMLRRL Sbjct 260 KSSVLFGIDLAKRDIARGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGDEHLAMLRRL 319 Query 304 MMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKCGDA 363 MMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQ LAGQSFVAVAPDGMDPCDLRL GD Sbjct 320 MMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQNLAGQSFVAVAPDGMDPCDLRLASGDT 379 Query 364 ALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYARQLA 423 ALRDLVARRTPLFEFAIR A+AE DL+SAEGRV ALRRCVPMVGQIKDPTLRDEYARQLA Sbjct 380 ALRDLVARRTPLFEFAIRTALAESDLESAEGRVGALRRCVPMVGQIKDPTLRDEYARQLA 439 Query 424 GWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPT-AGPPTELAVRPDPRDP 482 GWVGW DVAQVI RVRGEAK P G + T R A T G A RPDPRDP Sbjct 440 GWVGWDDVAQVIDRVRGEAKNATRPNRGGAATKTPRRVAHESTDTGSAEPAAARPDPRDP 499 Query 483 TLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQWLD 542 TLWPQREALKSALQYPALAGPVFD LTVE FTHP YAAVRAAID AGGT+ G++GAQW+D Sbjct 500 TLWPQREALKSALQYPALAGPVFDTLTVESFTHPGYAAVRAAIDAAGGTATGVTGAQWMD 559 Query 543 MVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKSKLQRM 602 MVRQQTTS +TS LISEL VE IQVD++KLPRYI GVLARLQEVW+GRQIAEVKSKLQRM Sbjct 560 MVRQQTTSPLTSGLISELTVETIQVDEEKLPRYIGGVLARLQEVWMGRQIAEVKSKLQRM 619 Query 603 SPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA 639 SPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA Sbjct 620 SPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA 656 >gi|118617124|ref|YP_905456.1| DNA primase [Mycobacterium ulcerans Agy99] gi|118569234|gb|ABL03985.1| DNA primase DnaG [Mycobacterium ulcerans Agy99] Length=656 Score = 1100 bits (2844), Expect = 0.0, Method: Compositional matrix adjust. Identities = 563/637 (89%), Positives = 586/637 (92%), Gaps = 1/637 (0%) Query 4 RISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHFHCF 63 RISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHFHCF Sbjct 20 RISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHFHCF 79 Query 64 GCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAANAA 123 GCGEGGDVYAF+QKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRL+AANAA Sbjct 80 GCGEGGDVYAFVQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLIAANAA 139 Query 124 AAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEFEEL 183 AAAFYA+AL+S EAA AR+YLTERSFDAAAA FGCGFAPSGWDSLTKHLQRKGFEF+EL Sbjct 140 AAAFYAEALESPEAALARKYLTERSFDAAAAHHFGCGFAPSGWDSLTKHLQRKGFEFKEL 199 Query 184 EAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETLLYK 243 EAAGLSRQGR GP+DRFHRRLLWPIR+SAGEV+GFGARRLFDDD M+AKYVNTPETLLYK Sbjct 200 EAAGLSRQGRRGPIDRFHRRLLWPIRSSAGEVIGFGARRLFDDDPMDAKYVNTPETLLYK 259 Query 244 KSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAMLRRL 303 KSSV+FGIDLAKRDIA+GHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFG EHLAMLRRL Sbjct 260 KSSVLFGIDLAKRDIARGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGDEHLAMLRRL 319 Query 304 MMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKCGDA 363 MMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQ LAGQSFVAVAPDGMDPCDLRL GD Sbjct 320 MMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQNLAGQSFVAVAPDGMDPCDLRLASGDT 379 Query 364 ALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYARQLA 423 ALRDLVARRTPLFEFAIR A+AE DL+SAEGRV ALRRCVPMVGQIKDPTLRDEYARQLA Sbjct 380 ALRDLVARRTPLFEFAIRTALAESDLESAEGRVGALRRCVPMVGQIKDPTLRDEYARQLA 439 Query 424 GWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPT-AGPPTELAVRPDPRDP 482 GWVGW DVAQVI RVRGEAK P G + T R A T G A RPDPRDP Sbjct 440 GWVGWDDVAQVIDRVRGEAKNATRPNRGGAATKTPRRVAHESTDTGSAEPAAARPDPRDP 499 Query 483 TLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQWLD 542 TLWPQREALKSALQYPAL GPVFD LTVE FTHP YAAVRAAID AGGT+ G++GAQW+D Sbjct 500 TLWPQREALKSALQYPALTGPVFDTLTVESFTHPGYAAVRAAIDAAGGTATGVTGAQWMD 559 Query 543 MVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKSKLQRM 602 MVRQQTTS +TS LISEL VE IQVD++KLPRYI GVLARLQEVW+GRQIAEVKSKLQRM Sbjct 560 MVRQQTTSPLTSGLISELTVETIQVDEEKLPRYIGGVLARLQEVWMGRQIAEVKSKLQRM 619 Query 603 SPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA 639 SPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA Sbjct 620 SPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA 656 >gi|240170987|ref|ZP_04749646.1| DNA primase [Mycobacterium kansasii ATCC 12478] Length=646 Score = 1092 bits (2825), Expect = 0.0, Method: Compositional matrix adjust. Identities = 563/638 (89%), Positives = 589/638 (93%), Gaps = 2/638 (0%) Query 4 RISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHFHCF 63 RISDRDIAAIR+GARIEDVVGDYVQLRRAGADSL+GLCPFHNEKSPSFHVRPNHGHFHCF Sbjct 9 RISDRDIAAIRDGARIEDVVGDYVQLRRAGADSLRGLCPFHNEKSPSFHVRPNHGHFHCF 68 Query 64 GCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAANAA 123 GCGEGGDVYAFIQKIEHVSFVEAVELLADRIG+TISYTGAATSVQRDRGSRSRLLAANAA Sbjct 69 GCGEGGDVYAFIQKIEHVSFVEAVELLADRIGYTISYTGAATSVQRDRGSRSRLLAANAA 128 Query 124 AAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEFEEL 183 AA FYA AL+SDEAAPAR YLT+R+FDA AAR+FGCGFAPSGWDSLTKHLQRKGFEF+EL Sbjct 129 AAEFYAVALESDEAAPARHYLTQRNFDAQAARRFGCGFAPSGWDSLTKHLQRKGFEFKEL 188 Query 184 EAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETLLYK 243 EAAGLSRQGRHGPMDRFHRRLLWPIR+SAGEV+GFGARRLFDDD MEAKYVNTPETLLYK Sbjct 189 EAAGLSRQGRHGPMDRFHRRLLWPIRSSAGEVIGFGARRLFDDDPMEAKYVNTPETLLYK 248 Query 244 KSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAMLRRL 303 KSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFG EHLAMLRRL Sbjct 249 KSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGDEHLAMLRRL 308 Query 304 MMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKCGDA 363 MMDDSFFRGELIYVFDGD AGRAAALKA DGEQ LAGQSFVAVAPDGMDPCDLRL GDA Sbjct 309 MMDDSFFRGELIYVFDGDAAGRAAALKALDGEQNLAGQSFVAVAPDGMDPCDLRLASGDA 368 Query 364 ALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYARQLA 423 ALRDLVARRTPLFEFAIR+A+AE DL+SAEGRVAALRRCVPMVGQIKDP LRDEYARQLA Sbjct 369 ALRDLVARRTPLFEFAIRSALAETDLNSAEGRVAALRRCVPMVGQIKDPMLRDEYARQLA 428 Query 424 GWVGWADVAQVIGRVRGEAKR-TKHPRLGRLGSTTIARAAQRPTAGPPTE-LAVRPDPRD 481 GWVGW DVAQV+ RVR +AK K P G GS RA Q+P P E A RPDPRD Sbjct 429 GWVGWDDVAQVVDRVRSQAKTPAKVPGRGHPGSKAPRRATQQPPDAPSAEPAAARPDPRD 488 Query 482 PTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQWL 541 PTLWPQREALKSALQYPALAGPVFD LTVE FTHP Y AVRAAI+ AGGTSAG++GAQW+ Sbjct 489 PTLWPQREALKSALQYPALAGPVFDTLTVESFTHPGYCAVRAAIEAAGGTSAGVTGAQWM 548 Query 542 DMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKSKLQR 601 DMV +QTTS +T+ LI+EL VEAI VDDDKLPRYI GVLARLQEVW+GRQIAEVKSKLQR Sbjct 549 DMVARQTTSPLTTGLINELAVEAIAVDDDKLPRYIGGVLARLQEVWMGRQIAEVKSKLQR 608 Query 602 MSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA 639 MSPIE GDEYHALFGDLVAMEAYRRSLLEQASG+DLTA Sbjct 609 MSPIEHGDEYHALFGDLVAMEAYRRSLLEQASGNDLTA 646 >gi|296166325|ref|ZP_06848762.1| DNA primase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898334|gb|EFG77903.1| DNA primase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=656 Score = 1080 bits (2792), Expect = 0.0, Method: Compositional matrix adjust. Identities = 551/637 (87%), Positives = 586/637 (92%), Gaps = 1/637 (0%) Query 3 GRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHFHC 62 GRI DRDIAAIRE RI++VVGDYVQLRRAGADSLKGLCPFH+EKSPSFHVRPNHGHFHC Sbjct 19 GRIPDRDIAAIRERVRIDEVVGDYVQLRRAGADSLKGLCPFHDEKSPSFHVRPNHGHFHC 78 Query 63 FGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAANA 122 FGCGEGGDVYAFIQKIEHV+FVEAVELLADRIGHTISYTG ATSVQRDRGSRSRL+AANA Sbjct 79 FGCGEGGDVYAFIQKIEHVTFVEAVELLADRIGHTISYTGPATSVQRDRGSRSRLVAANA 138 Query 123 AAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEFEE 182 AAA FYA L+SDEAAPARQYLTER+FD AAR+FGCGFAPSGWDSLTKHL RKGFEF+E Sbjct 139 AAAEFYAATLESDEAAPARQYLTERNFDGEAARRFGCGFAPSGWDSLTKHLVRKGFEFKE 198 Query 183 LEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETLLY 242 LEAAGLSRQGR GP+DRFHRRLLWPIRT+AGEV+GFGARRLFDDD MEAKY+NTPETLLY Sbjct 199 LEAAGLSRQGRRGPIDRFHRRLLWPIRTAAGEVIGFGARRLFDDDPMEAKYINTPETLLY 258 Query 243 KKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAMLRR 302 KKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHL+GVTTAVASCGTAFG EHLAMLRR Sbjct 259 KKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLSGVTTAVASCGTAFGDEHLAMLRR 318 Query 303 LMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKCGD 362 LMMDDSFFRGELIYVFDGD AGRAAALKAF GEQ LAGQSFVAVAPDGMDPCDLRL+ GD Sbjct 319 LMMDDSFFRGELIYVFDGDAAGRAAALKAFGGEQNLAGQSFVAVAPDGMDPCDLRLRSGD 378 Query 363 AALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYARQL 422 ALRDLVARRTPLFEFAIR A+AEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYARQL Sbjct 379 GALRDLVARRTPLFEFAIRTALAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYARQL 438 Query 423 AGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTEL-AVRPDPRD 481 AGWVGW DVAQVI RVR +AK++ P G + R AQ+P A ++ A RPDPRD Sbjct 439 AGWVGWDDVAQVIDRVRSQAKQSPAPVRGGTAANAARRVAQQPRAAVRSQPGATRPDPRD 498 Query 482 PTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQWL 541 PTLWPQREALKSALQYPALAGPVFD LTVE FTHP YAAVR AI+ AGGTS+G++GAQW+ Sbjct 499 PTLWPQREALKSALQYPALAGPVFDTLTVESFTHPGYAAVRGAIEAAGGTSSGVTGAQWI 558 Query 542 DMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKSKLQR 601 D VRQ+ S +T+ L+SELGVEA+QVDD+KLPRYIAGVLARLQEVW+GRQIAEVKSKLQR Sbjct 559 DAVRQKAGSDLTAGLVSELGVEAVQVDDEKLPRYIAGVLARLQEVWMGRQIAEVKSKLQR 618 Query 602 MSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLT 638 MSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLT Sbjct 619 MSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLT 655 >gi|254819371|ref|ZP_05224372.1| DNA primase [Mycobacterium intracellulare ATCC 13950] Length=650 Score = 1075 bits (2779), Expect = 0.0, Method: Compositional matrix adjust. Identities = 552/634 (88%), Positives = 589/634 (93%), Gaps = 2/634 (0%) Query 3 GRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHFHC 62 GRI DRDIAAIRE RI++VVGDYVQLRRAGADSLKGLCPFH+EKSPSFHVRPNHGHFHC Sbjct 19 GRIPDRDIAAIRERVRIDEVVGDYVQLRRAGADSLKGLCPFHDEKSPSFHVRPNHGHFHC 78 Query 63 FGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAANA 122 FGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTI+Y+G ATSVQRDRGSRSRL+AANA Sbjct 79 FGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTITYSGPATSVQRDRGSRSRLVAANA 138 Query 123 AAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEFEE 182 AAA FYA AL+SDEAAPARQYLTER+FDA AAR FGCGFAPSGWDSLTKHL RKGFEF+E Sbjct 139 AAAEFYAAALESDEAAPARQYLTERNFDAEAARHFGCGFAPSGWDSLTKHLVRKGFEFKE 198 Query 183 LEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETLLY 242 LEAAGLSRQGR GPMDRFHRRLLWPIR+SAGEV+GFGARRLFDDD MEAKY+NTPETLLY Sbjct 199 LEAAGLSRQGRRGPMDRFHRRLLWPIRSSAGEVIGFGARRLFDDDPMEAKYINTPETLLY 258 Query 243 KKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAMLRR 302 KKS+VMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFG EHLAMLRR Sbjct 259 KKSNVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGDEHLAMLRR 318 Query 303 LMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKCGD 362 LMMDDSFFRGELIYVFDGD AGRAAALKAF GEQ LAGQSFVAVAPDGMDPCDLRLK GD Sbjct 319 LMMDDSFFRGELIYVFDGDAAGRAAALKAFGGEQNLAGQSFVAVAPDGMDPCDLRLKSGD 378 Query 363 AALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYARQL 422 ALRDLVARRTPLFEFAIR+A+AEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYARQL Sbjct 379 GALRDLVARRTPLFEFAIRSALAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYARQL 438 Query 423 AGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRPDPRDP 482 AGWVGW DVAQVI RVRG++K K P G G +R A++P A + RPDPRDP Sbjct 439 AGWVGWDDVAQVIDRVRGQSKNAKTPARGGAGPKA-SRRAEQPAAAAHAAAS-RPDPRDP 496 Query 483 TLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQWLD 542 TLWPQREALKSALQYPALAGPVFD LTVE FTHP YAA+RAAI+TAGGTS+G++GAQWL+ Sbjct 497 TLWPQREALKSALQYPALAGPVFDTLTVESFTHPGYAAIRAAIETAGGTSSGVTGAQWLE 556 Query 543 MVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKSKLQRM 602 +VR + +S +T+ALISELGVEAIQVD++K+PRYIAGVLARLQEVW+GRQIAEVKSKLQRM Sbjct 557 VVRDRASSPLTAALISELGVEAIQVDEEKMPRYIAGVLARLQEVWMGRQIAEVKSKLQRM 616 Query 603 SPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDD 636 SPIEQGDEYHALFGDLVAMEAYRRSLLEQASGD+ Sbjct 617 SPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDE 650 >gi|118469474|ref|YP_888754.1| DNA primase [Mycobacterium smegmatis str. MC2 155] gi|9910813|sp|O52200.1|PRIM_MYCS2 RecName: Full=DNA primase gi|2739100|gb|AAB96635.1| primase [Mycobacterium smegmatis str. MC2 155] gi|118170761|gb|ABK71657.1| DNA primase [Mycobacterium smegmatis str. MC2 155] Length=636 Score = 1046 bits (2704), Expect = 0.0, Method: Compositional matrix adjust. Identities = 521/639 (82%), Positives = 575/639 (90%), Gaps = 10/639 (1%) Query 3 GRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHFHC 62 GRI DRDIAAIRE RIEDVVGDYVQLRRAGADSLKGLCPFH+EK+PSFHVRPNHGHFHC Sbjct 6 GRIPDRDIAAIREKVRIEDVVGDYVQLRRAGADSLKGLCPFHDEKTPSFHVRPNHGHFHC 65 Query 63 FGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATS-VQRDRGSRSRLLAAN 121 FGCGEGGDVYAFIQKIEHVSFVEAVELLAD++G+T++YTG++T+ VQRDRGSRSRLLAAN Sbjct 66 FGCGEGGDVYAFIQKIEHVSFVEAVELLADKVGYTVTYTGSSTTNVQRDRGSRSRLLAAN 125 Query 122 AAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEFE 181 AAAA FYA+ALQS+EAAPARQYLTER+FDAAAA KFGCG+APSGWD LTKHL RKGFEF+ Sbjct 126 AAAAEFYAEALQSEEAAPARQYLTERNFDAAAAAKFGCGYAPSGWDKLTKHLLRKGFEFK 185 Query 182 ELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETLL 241 ELEAAGLSR+G+ GPMDRFHRRLLWPIR S+GE +GFGARRLFDDD +AKYVNTPET+L Sbjct 186 ELEAAGLSREGKRGPMDRFHRRLLWPIRVSSGETIGFGARRLFDDDPNQAKYVNTPETVL 245 Query 242 YKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAMLR 301 YKKS V+FG+DLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFG +HL+MLR Sbjct 246 YKKSQVLFGLDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGEQHLSMLR 305 Query 302 RLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKCG 361 RLMMDD+FFRGELIYVFDGD+AGRAAA+KAF+GEQ L+GQSFVAVA DGMDPCDLRL+ G Sbjct 306 RLMMDDNFFRGELIYVFDGDDAGRAAAVKAFEGEQNLSGQSFVAVAADGMDPCDLRLRSG 365 Query 362 DAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYARQ 421 D ALRDLVARRTPLFEF IR+A+AE DLDSAEGRVAALRRCVPM+ +IKDPTLRDEYARQ Sbjct 366 DGALRDLVARRTPLFEFVIRSALAEHDLDSAEGRVAALRRCVPMLARIKDPTLRDEYARQ 425 Query 422 LAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRPDPRD 481 LAGWVGW +VAQVIGRVR EAK R G T AR +P PP + RPDP D Sbjct 426 LAGWVGWDNVAQVIGRVREEAKGGGRKDNNRRGQETAARP--KP---PPVQ---RPDPTD 477 Query 482 PTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQWL 541 PTLWPQREALK+ LQYPALAGPVFD LTVE FTHP Y AVR A++ AGGTSAG++GAQW+ Sbjct 478 PTLWPQREALKAGLQYPALAGPVFDTLTVESFTHPGYGAVRTAMEAAGGTSAGITGAQWI 537 Query 542 DMVRQQTTSTVTSALISELGVEAIQV-DDDKLPRYIAGVLARLQEVWLGRQIAEVKSKLQ 600 + VR+QTTS + L++EL VE I V DD+KLPRYI+ VLARLQEVW+GRQIAEVKSKLQ Sbjct 538 ETVREQTTSPAAANLVNELSVETINVEDDEKLPRYISSVLARLQEVWVGRQIAEVKSKLQ 597 Query 601 RMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA 639 RMSP+EQGDEYHALFGDLVAME+YRRSLLEQASGDDLTA Sbjct 598 RMSPVEQGDEYHALFGDLVAMESYRRSLLEQASGDDLTA 636 >gi|339295247|gb|AEJ47358.1| DNA primase [Mycobacterium tuberculosis CCDC5079] Length=535 Score = 1042 bits (2695), Expect = 0.0, Method: Compositional matrix adjust. Identities = 513/516 (99%), Positives = 513/516 (99%), Gaps = 0/516 (0%) Query 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF Sbjct 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 Query 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA 120 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA Sbjct 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA 120 Query 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF Sbjct 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 Query 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL Sbjct 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 Query 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML Sbjct 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 Query 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC Sbjct 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 Query 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR Sbjct 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 Query 421 QLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRPDPR 480 QLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRPDPR Sbjct 421 QLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRPDPR 480 Query 481 DPTLWPQREALKSALQYPALAGPVFDALTVEGFTHP 516 DPTLWPQREALKSALQYPALAGPVFDALTVEG P Sbjct 481 DPTLWPQREALKSALQYPALAGPVFDALTVEGLHAP 516 >gi|342857479|ref|ZP_08714135.1| DNA primase [Mycobacterium colombiense CECT 3035] gi|342134812|gb|EGT87978.1| DNA primase [Mycobacterium colombiense CECT 3035] Length=651 Score = 1040 bits (2688), Expect = 0.0, Method: Compositional matrix adjust. Identities = 542/633 (86%), Positives = 578/633 (92%), Gaps = 3/633 (0%) Query 5 ISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHFHCFG 64 I DRDIAAIRE RI++V+GDYVQLRRAGADSLKGLCPFH+EKSPSFHVRPNHGHFHCFG Sbjct 21 IPDRDIAAIRERVRIDEVIGDYVQLRRAGADSLKGLCPFHDEKSPSFHVRPNHGHFHCFG 80 Query 65 CGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAANAAA 124 CGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTI+Y+G ATSVQRDRGSRSRL+AANAAA Sbjct 81 CGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTINYSGPATSVQRDRGSRSRLVAANAAA 140 Query 125 AAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEFEELE 184 A FYA AL+S EAAPARQYLTER+FDA AAR+FGCGFAPSGWDSLTKHL RKGFEF+ELE Sbjct 141 AEFYAAALESAEAAPARQYLTERNFDAEAARRFGCGFAPSGWDSLTKHLVRKGFEFKELE 200 Query 185 AAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETLLYKK 244 AAGLSRQGR GPMDRFHRRLLWPIR+SAGEV+GFGARRLFDDD MEAKY+NTPETLLYKK Sbjct 201 AAGLSRQGRRGPMDRFHRRLLWPIRSSAGEVIGFGARRLFDDDPMEAKYINTPETLLYKK 260 Query 245 SSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAMLRRLM 304 S+VMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHL+GVTTAVASCGTAFG EHL+MLRRLM Sbjct 261 SNVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLSGVTTAVASCGTAFGDEHLSMLRRLM 320 Query 305 MDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKCGDAA 364 MDDSFFRGELIYVFDGD AGRAAALKAF GEQ LAGQSFVAVAPDGMDPCDLRLK GD A Sbjct 321 MDDSFFRGELIYVFDGDAAGRAAALKAFGGEQNLAGQSFVAVAPDGMDPCDLRLKSGDGA 380 Query 365 LRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYARQLAG 424 LRDLVARRTPLFEFAIR+A+AEMDLDSAEGRVAALRRCVPMV QIKDPTLRDEYARQLAG Sbjct 381 LRDLVARRTPLFEFAIRSALAEMDLDSAEGRVAALRRCVPMVSQIKDPTLRDEYARQLAG 440 Query 425 WVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQR-PTAGPPTELAVRPDPRDPT 483 WVGW DVAQVI RVR +AK + G RAA+ P A T A RPDPRDPT Sbjct 441 WVGWDDVAQVIDRVRSQAKSSHTQARGGSPPKAARRAAESAPAATQAT--AGRPDPRDPT 498 Query 484 LWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQWLDM 543 LWPQREALK+ALQYPA AGPVFD LTVE FTHP YAA+RAAI+TAGGTS+G+SGAQW++ Sbjct 499 LWPQREALKAALQYPAFAGPVFDTLTVESFTHPGYAAIRAAIETAGGTSSGISGAQWIEA 558 Query 544 VRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKSKLQRMS 603 VR Q +S +T+ L SELGVEAIQVD++KLPRYI GVLARLQEVW+GRQIAEVKSKLQRMS Sbjct 559 VRDQASSPLTAGLASELGVEAIQVDEEKLPRYIGGVLARLQEVWMGRQIAEVKSKLQRMS 618 Query 604 PIEQGDEYHALFGDLVAMEAYRRSLLEQASGDD 636 PIEQGDEYHALFGDLVAME+YRRSLLEQASGDD Sbjct 619 PIEQGDEYHALFGDLVAMESYRRSLLEQASGDD 651 >gi|41408228|ref|NP_961064.1| DNA primase [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396583|gb|AAS04447.1| DnaG [Mycobacterium avium subsp. paratuberculosis K-10] gi|336461676|gb|EGO40539.1| DNA primase, catalytic core [Mycobacterium avium subsp. paratuberculosis S397] Length=650 Score = 1023 bits (2646), Expect = 0.0, Method: Compositional matrix adjust. Identities = 544/632 (87%), Positives = 582/632 (93%), Gaps = 2/632 (0%) Query 5 ISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHFHCFG 64 I DRDIAAIRE RI++VVGDYVQLRRAGADSLKGLCPFH+EKSPSFHVRPNHGHFHCFG Sbjct 21 IPDRDIAAIRERVRIDEVVGDYVQLRRAGADSLKGLCPFHDEKSPSFHVRPNHGHFHCFG 80 Query 65 CGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAANAAA 124 CGEGGDVYAF+QKIEHVSFVEAVELLADRIGHTI+Y+G ATSVQRDRGSRSRL+AANAAA Sbjct 81 CGEGGDVYAFLQKIEHVSFVEAVELLADRIGHTITYSGPATSVQRDRGSRSRLIAANAAA 140 Query 125 AAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEFEELE 184 A FYA AL+SDEAAPARQYLTER+FDA AAR+FGCGFAPSGWD+LTKHLQRKGFEF+ELE Sbjct 141 AEFYAAALESDEAAPARQYLTERNFDAEAARRFGCGFAPSGWDTLTKHLQRKGFEFKELE 200 Query 185 AAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETLLYKK 244 AAGLSRQGR GPMDRFHRRLLWPIR+SAGEV+GFGARRLFDDD MEAKY+NTPETLLYKK Sbjct 201 AAGLSRQGRRGPMDRFHRRLLWPIRSSAGEVIGFGARRLFDDDPMEAKYINTPETLLYKK 260 Query 245 SSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAMLRRLM 304 S+VMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFG EHLAMLRRLM Sbjct 261 SNVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGDEHLAMLRRLM 320 Query 305 MDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKCGDAA 364 MDDSFFRGELIYVFDGD AGRAAALKAF GEQ LAGQSFVAVAPDGMDPCDLRL+ GDAA Sbjct 321 MDDSFFRGELIYVFDGDAAGRAAALKAFGGEQNLAGQSFVAVAPDGMDPCDLRLRSGDAA 380 Query 365 LRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYARQLAG 424 LRDLVARRTPLFEFAIR+A+AE+DLDSAEGRVAALRRCVPMV QIKDPTLRDEYARQLAG Sbjct 381 LRDLVARRTPLFEFAIRSALAELDLDSAEGRVAALRRCVPMVAQIKDPTLRDEYARQLAG 440 Query 425 WVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRPDPRDPTL 484 WVGW+DVAQVI RVR ++K + G G+ RA Q A RPDPRDPTL Sbjct 441 WVGWSDVAQVIDRVRSQSKHSAGAGRGGSGARVSRRAEQSAAPA--GPAASRPDPRDPTL 498 Query 485 WPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQWLDMV 544 WPQREALKSALQYPALAGPVFD+LTVE FTHP YAAVRAAI+ AGGTS+G++G QW++ V Sbjct 499 WPQREALKSALQYPALAGPVFDSLTVESFTHPGYAAVRAAIEAAGGTSSGVTGGQWIEAV 558 Query 545 RQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKSKLQRMSP 604 R + +S +T+ LISELGVEAIQVDD+KLPRYIAGVLARLQEVW+GRQIAEVKSKLQRMSP Sbjct 559 RDRASSPLTAGLISELGVEAIQVDDEKLPRYIAGVLARLQEVWMGRQIAEVKSKLQRMSP 618 Query 605 IEQGDEYHALFGDLVAMEAYRRSLLEQASGDD 636 IEQGDEYHALFGDLVAMEAYRRSLLEQASGDD Sbjct 619 IEQGDEYHALFGDLVAMEAYRRSLLEQASGDD 650 >gi|254774769|ref|ZP_05216285.1| DNA primase [Mycobacterium avium subsp. avium ATCC 25291] Length=650 Score = 1021 bits (2641), Expect = 0.0, Method: Compositional matrix adjust. Identities = 544/632 (87%), Positives = 581/632 (92%), Gaps = 2/632 (0%) Query 5 ISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHFHCFG 64 I DRDIAAIRE RI++VVGDYVQLRRAGADSLKGLCPFH+EKSPSFHVRPNHGHFHCFG Sbjct 21 IPDRDIAAIRERVRIDEVVGDYVQLRRAGADSLKGLCPFHDEKSPSFHVRPNHGHFHCFG 80 Query 65 CGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAANAAA 124 CGEGGDVYAF+QKIEHVSFVEAVELLADRIGHTI+Y+G ATSVQRDRGSRSRL+AANAAA Sbjct 81 CGEGGDVYAFLQKIEHVSFVEAVELLADRIGHTITYSGPATSVQRDRGSRSRLIAANAAA 140 Query 125 AAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEFEELE 184 A FYA AL+SDEAAPARQYLTER+FDA AAR+FGCGFAPSGWD+LTKHLQRKGFEF+ELE Sbjct 141 AEFYAAALESDEAAPARQYLTERNFDAEAARRFGCGFAPSGWDTLTKHLQRKGFEFKELE 200 Query 185 AAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETLLYKK 244 AAGLSRQGR GPMDRFHRRLLWPIR+SAGEV+GFGARRLFDDD MEAKY+NTPETLLYKK Sbjct 201 AAGLSRQGRRGPMDRFHRRLLWPIRSSAGEVIGFGARRLFDDDPMEAKYINTPETLLYKK 260 Query 245 SSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAMLRRLM 304 S+VMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFG EHLAMLRRLM Sbjct 261 SNVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGDEHLAMLRRLM 320 Query 305 MDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKCGDAA 364 MDDSFFRGELIYVFDGD AGRAAALKAF GEQ LAGQSFVAVAPDGMDPCDLRL+ GDAA Sbjct 321 MDDSFFRGELIYVFDGDAAGRAAALKAFGGEQNLAGQSFVAVAPDGMDPCDLRLRSGDAA 380 Query 365 LRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYARQLAG 424 LRDLVARRTPLFEFAIR+A+AE+DLDSAEGRVAALRRCVPMV QIKDPTLRDEYARQLAG Sbjct 381 LRDLVARRTPLFEFAIRSALAELDLDSAEGRVAALRRCVPMVAQIKDPTLRDEYARQLAG 440 Query 425 WVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRPDPRDPTL 484 WVGW+DVAQVI RVR ++K + G G RA Q A RPDPRDPTL Sbjct 441 WVGWSDVAQVIDRVRSQSKHSAGAGRGGSGGRVSRRAEQSAAPA--GPAASRPDPRDPTL 498 Query 485 WPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQWLDMV 544 WPQREALKSALQYPALAGPVFD+LTVE FTHP YAAVRAAI+ AGGTS+G++G QW++ V Sbjct 499 WPQREALKSALQYPALAGPVFDSLTVESFTHPGYAAVRAAIEAAGGTSSGVTGGQWIEAV 558 Query 545 RQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKSKLQRMSP 604 R + +S +T+ LISELGVEAIQVDD+KLPRYIAGVLARLQEVW+GRQIAEVKSKLQRMSP Sbjct 559 RDRASSPLTAGLISELGVEAIQVDDEKLPRYIAGVLARLQEVWMGRQIAEVKSKLQRMSP 618 Query 605 IEQGDEYHALFGDLVAMEAYRRSLLEQASGDD 636 IEQGDEYHALFGDLVAMEAYRRSLLEQASGDD Sbjct 619 IEQGDEYHALFGDLVAMEAYRRSLLEQASGDD 650 >gi|118467186|ref|YP_881262.1| DNA primase [Mycobacterium avium 104] gi|118168473|gb|ABK69370.1| DNA primase [Mycobacterium avium 104] Length=650 Score = 1020 bits (2637), Expect = 0.0, Method: Compositional matrix adjust. Identities = 544/632 (87%), Positives = 580/632 (92%), Gaps = 2/632 (0%) Query 5 ISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHFHCFG 64 I DRDIAAIRE RI++VVGDYVQLRRAGADSLKGLCPFH+EKSPSFHVRPNHGHFHCFG Sbjct 21 IPDRDIAAIRERVRIDEVVGDYVQLRRAGADSLKGLCPFHDEKSPSFHVRPNHGHFHCFG 80 Query 65 CGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAANAAA 124 CGEGGDVYAF+QKIEHVSFVEAVELLADRIGHTI+Y+G ATSVQRDRGSRSRL+AANAAA Sbjct 81 CGEGGDVYAFLQKIEHVSFVEAVELLADRIGHTITYSGPATSVQRDRGSRSRLIAANAAA 140 Query 125 AAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEFEELE 184 A FYA AL+SDEAAPARQYLTER+FDA AAR FGCGFAPSGWD+LTKHLQRKGFEF+ELE Sbjct 141 AEFYAAALESDEAAPARQYLTERNFDAEAARHFGCGFAPSGWDTLTKHLQRKGFEFKELE 200 Query 185 AAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETLLYKK 244 AAGLSRQGR GPMDRFHRRLLWPIR+SAGEV+GFGARRLFDDD MEAKY+NTPETLLYKK Sbjct 201 AAGLSRQGRRGPMDRFHRRLLWPIRSSAGEVIGFGARRLFDDDPMEAKYINTPETLLYKK 260 Query 245 SSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAMLRRLM 304 S+VMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFG EHLAMLRRLM Sbjct 261 SNVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGDEHLAMLRRLM 320 Query 305 MDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKCGDAA 364 MDDSFFRGELIYVFDGD AGRAAALKAF GEQ LAGQSFVAVAPDGMDPCDLRL+ GDAA Sbjct 321 MDDSFFRGELIYVFDGDAAGRAAALKAFGGEQNLAGQSFVAVAPDGMDPCDLRLRSGDAA 380 Query 365 LRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYARQLAG 424 LRDLVARRTPLFEFAIR+A+AE+DLDSAEGRVAALRRCVPMV QIKDPTLRDEYARQLAG Sbjct 381 LRDLVARRTPLFEFAIRSALAELDLDSAEGRVAALRRCVPMVAQIKDPTLRDEYARQLAG 440 Query 425 WVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRPDPRDPTL 484 WVGW+DVAQVI RVR ++K + G G RA Q A RPDPRDPTL Sbjct 441 WVGWSDVAQVIDRVRSQSKHSAGAGRGGSGGRVSRRAEQSAAPA--GPAASRPDPRDPTL 498 Query 485 WPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQWLDMV 544 WPQREALKSALQYPALAGPVFD+LTVE FTHP YAAVRAAI+ AGGTS+G++G QW++ V Sbjct 499 WPQREALKSALQYPALAGPVFDSLTVESFTHPGYAAVRAAIEAAGGTSSGVTGGQWIEAV 558 Query 545 RQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKSKLQRMSP 604 R + +S +T+ LISELGVEAIQVDD+KLPRYIAGVLARLQEVW+GRQIAEVKSKLQRMSP Sbjct 559 RDRASSPLTAGLISELGVEAIQVDDEKLPRYIAGVLARLQEVWMGRQIAEVKSKLQRMSP 618 Query 605 IEQGDEYHALFGDLVAMEAYRRSLLEQASGDD 636 IEQGDEYHALFGDLVAMEAYRRSLLEQASGDD Sbjct 619 IEQGDEYHALFGDLVAMEAYRRSLLEQASGDD 650 >gi|15827366|ref|NP_301629.1| DNA primase [Mycobacterium leprae TN] gi|221229843|ref|YP_002503259.1| DNA primase [Mycobacterium leprae Br4923] gi|18202773|sp|Q9CCG2.1|PRIM_MYCLE RecName: Full=DNA primase gi|13092915|emb|CAC30343.1| DNA primase [Mycobacterium leprae] gi|219932950|emb|CAR70928.1| DNA primase [Mycobacterium leprae Br4923] Length=642 Score = 998 bits (2580), Expect = 0.0, Method: Compositional matrix adjust. Identities = 516/642 (81%), Positives = 563/642 (88%), Gaps = 3/642 (0%) Query 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 M GRI DRDIAAIRE IE+VVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF Sbjct 1 MVGRIPDRDIAAIRERVCIEEVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 Query 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA 120 HCFGC EGGDVYAFIQKIEHVSFVEAVE+LADRIGHTI+Y G ATSVQRDRGSRSRL+AA Sbjct 61 HCFGCSEGGDVYAFIQKIEHVSFVEAVEMLADRIGHTINYFGTATSVQRDRGSRSRLIAA 120 Query 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 NAAAAAFYA AL+SDEAAPARQYL ER+FDA AAR FGCGFAPSGWDSLTK+L KGFEF Sbjct 121 NAAAAAFYAAALESDEAAPARQYLMERNFDANAARHFGCGFAPSGWDSLTKYLISKGFEF 180 Query 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 ELEAAGLSRQGR GPMDRFHRRLLWPI T AGEV+GFGARRLFDDD MEAKYVNTPETL Sbjct 181 TELEAAGLSRQGRRGPMDRFHRRLLWPILTLAGEVIGFGARRLFDDDPMEAKYVNTPETL 240 Query 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 LYKKSSVMFGIDLAKRDI KGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFG EHLAML Sbjct 241 LYKKSSVMFGIDLAKRDIVKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGDEHLAML 300 Query 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 RRL+MDD+++RGELI+VFDGD AG+AAALKAFDG+Q++AG+SFVAVA DGMDPCDLRL Sbjct 301 RRLIMDDNWYRGELIFVFDGDAAGQAAALKAFDGDQQVAGKSFVAVAADGMDPCDLRLSS 360 Query 361 GDAALRDLVARRTPLFEFAIRAAIAE-MDL-DSAEGRVAALRRCVPMVGQIKDPTLRDEY 418 GD ALRDLVA R P+FEFAIR+ I + M L D + +V ALRR VP+V +I+D LRDEY Sbjct 361 GDQALRDLVACRKPMFEFAIRSLIPDGMVLDDDPQAKVDALRRSVPLVARIRDYALRDEY 420 Query 419 ARQLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAA-QRPTAGPPTELAVRP 477 AR+LAGW GW+D QV+ RVR EA R P R S ++ ++ +P P +LA RP Sbjct 421 ARRLAGWTGWSDEGQVLARVREEANRRSVPERTRRRSVSVEQSPFMQPPGAPADQLAARP 480 Query 478 DPRDPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSG 537 DPRDPTLWPQREALKS LQYP LAGPVFD LTVE FTHP Y AVRAAID AGG SAG++G Sbjct 481 DPRDPTLWPQREALKSVLQYPVLAGPVFDTLTVESFTHPGYGAVRAAIDAAGGASAGITG 540 Query 538 AQWLDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKS 597 AQW+D+VRQQTTS + + LI+ELGVE+IQVDD+KLPRYI GVLARLQEVW+GRQIAEVKS Sbjct 541 AQWIDVVRQQTTSALIAGLINELGVESIQVDDEKLPRYIDGVLARLQEVWMGRQIAEVKS 600 Query 598 KLQRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA 639 KLQRMSPI+QGDEYH LFGDLVAMEAYRRSLLEQASGDD+TA Sbjct 601 KLQRMSPIDQGDEYHELFGDLVAMEAYRRSLLEQASGDDMTA 642 >gi|120404772|ref|YP_954601.1| DNA primase [Mycobacterium vanbaalenii PYR-1] gi|119957590|gb|ABM14595.1| DNA primase [Mycobacterium vanbaalenii PYR-1] Length=649 Score = 996 bits (2575), Expect = 0.0, Method: Compositional matrix adjust. Identities = 500/643 (78%), Positives = 563/643 (88%), Gaps = 9/643 (1%) Query 3 GRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHFHC 62 GRI DRDIAAIRE +EDVVGDYVQLRRAGADSLKGLCPFH+EKSPSFHVRPNHGHFHC Sbjct 10 GRIPDRDIAAIRERVNVEDVVGDYVQLRRAGADSLKGLCPFHDEKSPSFHVRPNHGHFHC 69 Query 63 FGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATS-VQRDRGSRSRLLAAN 121 FGCGEGGDVYAF+QKIEHVSFVEAVELLADR+G+TI+YTGA+T+ VQRDRGSRSRLLAAN Sbjct 70 FGCGEGGDVYAFLQKIEHVSFVEAVELLADRVGYTITYTGASTTNVQRDRGSRSRLLAAN 129 Query 122 AAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEFE 181 AAA FYA+ALQS EAAPARQYL +R+FDAAAA FGCGFAPSGW++LTKHLQRKGFEF+ Sbjct 130 AAAQEFYAEALQSAEAAPARQYLLDRNFDAAAAATFGCGFAPSGWETLTKHLQRKGFEFK 189 Query 182 ELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETLL 241 ELEAAGLSR+GR GPMDRFHRRLLWPIRTSAGEV+GFGARR+FDDD MEAKYVNTPET+L Sbjct 190 ELEAAGLSREGRRGPMDRFHRRLLWPIRTSAGEVIGFGARRIFDDDPMEAKYVNTPETVL 249 Query 242 YKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAMLR 301 YKKSSV+FG+DLAKRDIAK H+AVVVEGYTDVMAMHLAG TTAVASCGTAFG HL++LR Sbjct 250 YKKSSVLFGLDLAKRDIAKSHRAVVVEGYTDVMAMHLAGETTAVASCGTAFGDSHLSLLR 309 Query 302 RLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKCG 361 RLMMDD+++RGELI+VFDGD AG+AAALKAFDG+Q++AG+SFVAVA DGMDPCDLRLK G Sbjct 310 RLMMDDNWYRGELIFVFDGDAAGQAAALKAFDGDQQVAGKSFVAVAADGMDPCDLRLKSG 369 Query 362 DAALRDLVARRTPLFEFAIRAAIAEMD-LDS-AEGRVAALRRCVPMVGQIKDPTLRDEYA 419 D ALRDLVARR P+FEFA+R+ I D LD+ + +V ALR+CVP+V +I+D LRDEYA Sbjct 370 DGALRDLVARRIPMFEFAVRSLIPSGDALDNDPQAKVDALRQCVPLVARIRDYALRDEYA 429 Query 420 RQLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTEL---AVR 476 R+LAGW GW D QV+ RVR EA + P GR A AAQ P A P T R Sbjct 430 RRLAGWTGWNDEGQVLNRVREEAAKRGMPDRGRRRG---ASAAQTPPASPATSAVPPVAR 486 Query 477 PDPRDPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLS 536 PDP DPTLWPQREALKSALQYPALAGPVFD+L E FTHP Y AVRAAI+ AGGT+AG++ Sbjct 487 PDPADPTLWPQREALKSALQYPALAGPVFDSLAAESFTHPGYTAVRAAIEAAGGTAAGVT 546 Query 537 GAQWLDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVK 596 GAQW++MVR Q ++ +L++ELGVEAI DD++LPRYI GVLARLQEVW+GRQIA+VK Sbjct 547 GAQWIEMVRDQASTPEAGSLVNELGVEAINADDERLPRYIGGVLARLQEVWIGRQIADVK 606 Query 597 SKLQRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA 639 SKLQRMSP+EQGDEYHALFGDLVAMEAYRRSLLEQASG+DLTA Sbjct 607 SKLQRMSPVEQGDEYHALFGDLVAMEAYRRSLLEQASGNDLTA 649 >gi|333990215|ref|YP_004522829.1| DNA primase DnaG [Mycobacterium sp. JDM601] gi|333486183|gb|AEF35575.1| DNA primase DnaG [Mycobacterium sp. JDM601] Length=631 Score = 991 bits (2562), Expect = 0.0, Method: Compositional matrix adjust. Identities = 521/640 (82%), Positives = 566/640 (89%), Gaps = 10/640 (1%) Query 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 M GRISDRDIA IRE RIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHG F Sbjct 1 MPGRISDRDIATIRERVRIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGLF 60 Query 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGA-ATSVQRDRGSRSRLLA 119 HCFGCGEGGDVYAF+QKIEH SFVEAVELLADR+GHTI+YTGA AT++QR+RG RSRL+A Sbjct 61 HCFGCGEGGDVYAFVQKIEHASFVEAVELLADRVGHTITYTGASATNIQRERGGRSRLIA 120 Query 120 ANAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFE 179 ANAAAA FYA AL S EAAPAR+YLTER+FDAAAA++FGCGFAPSGWD LTKHL RKGFE Sbjct 121 ANAAAAEFYAAALGSPEAAPARKYLTERNFDAAAAQRFGCGFAPSGWDGLTKHLLRKGFE 180 Query 180 FEELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPET 239 F+ELE AGLSR+GR GPMDRFHRRLLWPIR+SAGEV+GFGARRLFDDD MEAKYVNTPET Sbjct 181 FKELETAGLSREGRRGPMDRFHRRLLWPIRSSAGEVIGFGARRLFDDDPMEAKYVNTPET 240 Query 240 LLYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAM 299 LYKKS+V+FG+DLAKRDIA+GHQA+VVEGYTDVMAMHLAGVTTAVASCGTAFG EHLAM Sbjct 241 TLYKKSNVLFGLDLAKRDIARGHQAIVVEGYTDVMAMHLAGVTTAVASCGTAFGDEHLAM 300 Query 300 LRRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLK 359 LRRLMMDD FFRGELIYVFDGD AGRAAA+KA +GEQ+LAGQSFVAVA DGMDPCDLRL Sbjct 301 LRRLMMDDKFFRGELIYVFDGDAAGRAAAVKALEGEQQLAGQSFVAVAADGMDPCDLRLA 360 Query 360 CGDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYA 419 GD ALRDLVARRTPLFEFA+R A+AEMDLD+AEGRVAALRRCVPMV IKDPTLRDEYA Sbjct 361 HGDEALRDLVARRTPLFEFAVRTALAEMDLDNAEGRVAALRRCVPMVAAIKDPTLRDEYA 420 Query 420 RQLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRPDP 479 RQLAGWVGW DVAQVIGRVR AK ++ R + P A RP+P Sbjct 421 RQLAGWVGWDDVAQVIGRVRAAAKDSR---------GAAKRMSNTPAAAAAQPPVARPNP 471 Query 480 RDPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQ 539 DPTLWPQREALK+ALQ+P LAGPVFD+LTVE FTHP YAAVR+AIDTAGGT+ +GAQ Sbjct 472 ADPTLWPQREALKAALQFPTLAGPVFDSLTVESFTHPGYAAVRSAIDTAGGTAGAAAGAQ 531 Query 540 WLDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKSKL 599 W++ VR+QTTS +T LI EL VE+I+VDD+KLPRYI GVLARLQEVW+GRQIAEVKSKL Sbjct 532 WIETVREQTTSPLTIGLIHELSVESIRVDDEKLPRYIGGVLARLQEVWVGRQIAEVKSKL 591 Query 600 QRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA 639 QRMSP+E DEYHALFGDLVAMEAYRRSLLEQASGDDLTA Sbjct 592 QRMSPVEHSDEYHALFGDLVAMEAYRRSLLEQASGDDLTA 631 >gi|169628798|ref|YP_001702447.1| DNA primase [Mycobacterium abscessus ATCC 19977] gi|169240765|emb|CAM61793.1| DNA primase DnaG [Mycobacterium abscessus] Length=634 Score = 972 bits (2512), Expect = 0.0, Method: Compositional matrix adjust. Identities = 490/639 (77%), Positives = 550/639 (87%), Gaps = 7/639 (1%) Query 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 M+GRI DRDIAAIRE RIED+VGDYVQL+RAGADSLKGLCPFH+EKSPSFHVRPNHGHF Sbjct 1 MAGRIPDRDIAAIRERTRIEDIVGDYVQLKRAGADSLKGLCPFHDEKSPSFHVRPNHGHF 60 Query 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA 120 HCFGCGEGGD Y FIQKIEH++FVEAVE LADRIG+TI+Y G T+ QRDRG+R+RL+AA Sbjct 61 HCFGCGEGGDAYTFIQKIEHITFVEAVERLADRIGYTINYEGGGTAAQRDRGTRARLVAA 120 Query 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 NAAA FYA AL S EAAPARQYLTER+FD AAA+++GCGFAPSGWD+LTKHL RKGFEF Sbjct 121 NAAAQEFYAAALDSPEAAPARQYLTERNFDGAAAKQYGCGFAPSGWDTLTKHLMRKGFEF 180 Query 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 +ELEAAGLSR+GR GPMDRFHRRLLWPIR S+GEV+GFGAR++FDDD M KYVNTPET+ Sbjct 181 KELEAAGLSREGRRGPMDRFHRRLLWPIRASSGEVIGFGARKIFDDDTMPGKYVNTPETM 240 Query 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 LYKKSSV+FG+DLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFG EHL+ML Sbjct 241 LYKKSSVLFGLDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGDEHLSML 300 Query 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 RRLMMDDS+FRGELIYVFDGD AG+AAALKAF+GEQ LAGQSFVAVAPDGMDPCDLRLK Sbjct 301 RRLMMDDSYFRGELIYVFDGDAAGQAAALKAFEGEQNLAGQSFVAVAPDGMDPCDLRLKS 360 Query 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 G+ ALRDLVARR PLF FAIR+A+AE DL+ AEGRV ALRRCVPMV +IKDPTLRDEYAR Sbjct 361 GEGALRDLVARRIPLFAFAIRSALAESDLEIAEGRVDALRRCVPMVAKIKDPTLRDEYAR 420 Query 421 QLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRPDPR 480 QLAGWVGW DVAQV+ RVR EA + G + A R T PDP+ Sbjct 421 QLAGWVGWDDVAQVLARVREEAGKAAK------GGSVSADRRPRGTETAAAPKVSMPDPK 474 Query 481 DPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQW 540 DPTLWPQREALK+ALQ+PA AGPVFD+LT + FTHP Y AVR AI+ AGGT+AG+ GA+W Sbjct 475 DPTLWPQREALKAALQFPAFAGPVFDSLTTDSFTHPGYVAVRTAIEVAGGTAAGIVGAEW 534 Query 541 LDMVRQQTTSTVTSALISELGVEAIQVD-DDKLPRYIAGVLARLQEVWLGRQIAEVKSKL 599 +D+VR+Q S LI+ L E IQVD D++LPRYI VLA+LQEVW+GRQ+AEVKSKL Sbjct 535 IDVVRRQAASPHVVTLINALTAEVIQVDSDERLPRYIGSVLAKLQEVWVGRQVAEVKSKL 594 Query 600 QRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLT 638 QRMSP++ DEYHALFGDLVA+EAYRRSLLEQ SGDDL+ Sbjct 595 QRMSPVDNADEYHALFGDLVALEAYRRSLLEQVSGDDLS 633 >gi|126436031|ref|YP_001071722.1| DNA primase [Mycobacterium sp. JLS] gi|126235831|gb|ABN99231.1| DNA primase [Mycobacterium sp. JLS] Length=640 Score = 970 bits (2507), Expect = 0.0, Method: Compositional matrix adjust. Identities = 504/643 (79%), Positives = 564/643 (88%), Gaps = 7/643 (1%) Query 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 M+GRI DRDIAAIRE RIEDVVGDYVQLRRAGADSLKGLCPFH+EKSPSFHVRPNHGHF Sbjct 1 MAGRIPDRDIAAIRERVRIEDVVGDYVQLRRAGADSLKGLCPFHDEKSPSFHVRPNHGHF 60 Query 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAA-TSVQRDRGSRSRLLA 119 HCFGCGEGGDVYAF+QKIEHVSFVE+VELLADRIG+T++YTGA+ T+VQRDRGSRSRLLA Sbjct 61 HCFGCGEGGDVYAFVQKIEHVSFVESVELLADRIGYTVTYTGASNTNVQRDRGSRSRLLA 120 Query 120 ANAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFE 179 ANAAA FYA+AL SDEAAPARQYL ER+FDA AA +FGCGFAPSGWD LTKHL RKGFE Sbjct 121 ANAAAQEFYAEALTSDEAAPARQYLIERNFDAQAAARFGCGFAPSGWDKLTKHLLRKGFE 180 Query 180 FEELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPET 239 F+ELEAAGLSR+G+ GPMDRFHRRLLWPIR + GEV+GFGARR+FDDD MEAKYVNTPET Sbjct 181 FKELEAAGLSREGKRGPMDRFHRRLLWPIRAAGGEVIGFGARRIFDDDQMEAKYVNTPET 240 Query 240 LLYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAM 299 +LYKKS+V+FG+DLAKRDIAK H+AVVVEGYTDVMAMHLA TTAVASCGTAFG HLA+ Sbjct 241 VLYKKSAVLFGLDLAKRDIAKSHRAVVVEGYTDVMAMHLANETTAVASCGTAFGEGHLAL 300 Query 300 LRRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLK 359 LRRLMMDD+++RGELI+VFDGD AG+AAALKAFDG+Q++AG+SFVAVA DGMDPCDLRLK Sbjct 301 LRRLMMDDNWYRGELIFVFDGDAAGQAAALKAFDGDQQVAGKSFVAVAADGMDPCDLRLK 360 Query 360 CGDAALRDLVARRTPLFEFAIRAAIAEMDL--DSAEGRVAALRRCVPMVGQIKDPTLRDE 417 GD ALRDLVARR P+FEFAIR+ I D+ + +V ALRRCVP+V +I+D LRDE Sbjct 361 SGDNALRDLVARRIPMFEFAIRSLIPAGDVLDNDPAAQVEALRRCVPLVSRIRDYALRDE 420 Query 418 YARQLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRP 477 YAR+LAGW GWAD AQV+ RVR EA + P GR + A AQ P P ++A RP Sbjct 421 YARRLAGWTGWADEAQVLNRVREEAAKRGMPDRGRRRNGADAAPAQ-PRRAP--DVAARP 477 Query 478 DPRDPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSG 537 DP DPTLWPQREALKSALQYPALAGPVFDALTV+ FTHP Y AVR AI+ AGG +AGLSG Sbjct 478 DPADPTLWPQREALKSALQYPALAGPVFDALTVDSFTHPGYRAVRTAIEAAGGAAAGLSG 537 Query 538 AQWLDMVRQQTTSTVTSALISELGVEAIQV-DDDKLPRYIAGVLARLQEVWLGRQIAEVK 596 AQW+++VR+QT S + L++EL VEAI+V DDDKLPRYI GVLARLQEVW+GRQIAEVK Sbjct 538 AQWIEVVREQTASPQAANLVNELSVEAIRVEDDDKLPRYIGGVLARLQEVWVGRQIAEVK 597 Query 597 SKLQRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA 639 SKLQRMSP+EQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA Sbjct 598 SKLQRMSPVEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA 640 >gi|108800408|ref|YP_640605.1| DNA primase [Mycobacterium sp. MCS] gi|119869537|ref|YP_939489.1| DNA primase [Mycobacterium sp. KMS] gi|108770827|gb|ABG09549.1| DNA primase [Mycobacterium sp. MCS] gi|119695626|gb|ABL92699.1| DNA primase [Mycobacterium sp. KMS] Length=640 Score = 967 bits (2499), Expect = 0.0, Method: Compositional matrix adjust. Identities = 502/643 (79%), Positives = 563/643 (88%), Gaps = 7/643 (1%) Query 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 M+GRI DRDIAAIRE RIEDVVGDYVQLRRAGADSLKGLCPFH+EKSPSFHVRPNHGHF Sbjct 1 MAGRIPDRDIAAIRERVRIEDVVGDYVQLRRAGADSLKGLCPFHDEKSPSFHVRPNHGHF 60 Query 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAA-TSVQRDRGSRSRLLA 119 HCFGCGEGGDVYAF+QKIEHVSFVE+VELLADRIG+T++YTGA+ T+VQRDRGSRSRLLA Sbjct 61 HCFGCGEGGDVYAFVQKIEHVSFVESVELLADRIGYTVTYTGASNTNVQRDRGSRSRLLA 120 Query 120 ANAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFE 179 ANAAA FYA+AL SDEAAPARQYL ER+FDA AA +FGCGFAPSGWD LTKHL RKGFE Sbjct 121 ANAAAQEFYAEALTSDEAAPARQYLIERNFDAQAAARFGCGFAPSGWDKLTKHLLRKGFE 180 Query 180 FEELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPET 239 F+ELEAAGL+R+G+ GPMDRFHRRLLWPIR + GEV+GFGARR+FDDD MEAKYVNTPET Sbjct 181 FKELEAAGLAREGKRGPMDRFHRRLLWPIRAAGGEVIGFGARRIFDDDQMEAKYVNTPET 240 Query 240 LLYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAM 299 +LYKKS+V+FG+DLAKRDIAK H+AVVVEGYTDVMAMHLA TTAVASCGTAFG HLA+ Sbjct 241 VLYKKSAVLFGLDLAKRDIAKSHRAVVVEGYTDVMAMHLANETTAVASCGTAFGEGHLAL 300 Query 300 LRRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLK 359 LRRLMMDD+++RGELI+VFDGD AG+AAALKAFDG+Q++AG+SFVAVA DGMDPCDLRLK Sbjct 301 LRRLMMDDNWYRGELIFVFDGDAAGQAAALKAFDGDQQVAGKSFVAVAADGMDPCDLRLK 360 Query 360 CGDAALRDLVARRTPLFEFAIRAAIAEMDL--DSAEGRVAALRRCVPMVGQIKDPTLRDE 417 GD ALRDLVARR P+FEFAIR+ I D+ + +V ALRRCVP+V +I+D LRDE Sbjct 361 SGDNALRDLVARRIPMFEFAIRSLIPAGDVLDNDPAAQVEALRRCVPLVSRIRDYALRDE 420 Query 418 YARQLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRP 477 YAR+LAGW GWAD AQV+ RVR EA + P GR + A AQ P P ++A RP Sbjct 421 YARRLAGWTGWADEAQVLNRVREEAAKRGMPDRGRRRNGADAAPAQ-PRRAP--DVAARP 477 Query 478 DPRDPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSG 537 DP DPTLWPQREALKSALQYPALAGPVFDAL V+ FTHP Y AVR AI+ AGG +AGLSG Sbjct 478 DPADPTLWPQREALKSALQYPALAGPVFDALAVDSFTHPGYRAVRTAIEAAGGAAAGLSG 537 Query 538 AQWLDMVRQQTTSTVTSALISELGVEAIQV-DDDKLPRYIAGVLARLQEVWLGRQIAEVK 596 AQW+++VR+QT S + L++EL VEAI+V DDDKLPRYI GVLARLQEVW+GRQIAEVK Sbjct 538 AQWIEVVREQTASPQAANLVNELSVEAIRVEDDDKLPRYIGGVLARLQEVWVGRQIAEVK 597 Query 597 SKLQRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA 639 SKLQRMSP+EQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA Sbjct 598 SKLQRMSPVEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA 640 >gi|145223309|ref|YP_001133987.1| DNA primase [Mycobacterium gilvum PYR-GCK] gi|315443769|ref|YP_004076648.1| DNA primase [Mycobacterium sp. Spyr1] gi|145215795|gb|ABP45199.1| DNA primase [Mycobacterium gilvum PYR-GCK] gi|315262072|gb|ADT98813.1| DNA primase [Mycobacterium sp. Spyr1] Length=647 Score = 960 bits (2481), Expect = 0.0, Method: Compositional matrix adjust. Identities = 497/644 (78%), Positives = 559/644 (87%), Gaps = 13/644 (2%) Query 3 GRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHFHC 62 GRI DRDIAAIRE IEDVVGDYVQLRRAGADS+KGLCPFH+EKSPSFHVRPNHGHFHC Sbjct 10 GRIPDRDIAAIRERVNIEDVVGDYVQLRRAGADSMKGLCPFHDEKSPSFHVRPNHGHFHC 69 Query 63 FGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATS-VQRDRGSRSRLLAAN 121 FGCGEGGDVYAF+QKIEHVSFVEAVELLADR+G+T++YTG +T+ VQRDRGSRSRLLAAN Sbjct 70 FGCGEGGDVYAFLQKIEHVSFVEAVELLADRVGYTVTYTGGSTTNVQRDRGSRSRLLAAN 129 Query 122 AAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEFE 181 AAA FYA+ LQS+EAA ARQYL +R+FDAAAA KFGCGFAPSGW++LTKHL RKGFEF+ Sbjct 130 AAAQEFYAEQLQSEEAALARQYLLDRNFDAAAATKFGCGFAPSGWETLTKHLLRKGFEFK 189 Query 182 ELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETLL 241 ELEAAGLSR+GR GPMDRFHRRLLWPIR S GEV+GFGARR+FDDD MEAKYVNTPET+L Sbjct 190 ELEAAGLSREGRRGPMDRFHRRLLWPIRASGGEVIGFGARRIFDDDPMEAKYVNTPETVL 249 Query 242 YKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAMLR 301 YKKSSV+FG+DLAKRDIAK H+AVVVEGYTDVMAMHLAG TTAVASCGTAFG HL++LR Sbjct 250 YKKSSVLFGLDLAKRDIAKAHRAVVVEGYTDVMAMHLAGETTAVASCGTAFGDSHLSLLR 309 Query 302 RLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKCG 361 RLMMDD+++RGELI+VFDGD AG+AAALKAFDG+Q++AG+SFVAVA DGMDPCDLRLK G Sbjct 310 RLMMDDNWYRGELIFVFDGDAAGQAAALKAFDGDQQVAGKSFVAVAADGMDPCDLRLKSG 369 Query 362 DAALRDLVARRTPLFEFAIRAAIAEMDL--DSAEGRVAALRRCVPMVGQIKDPTLRDEYA 419 D ALRDLVARR P+FEFA+R+ I D+ + +V ALR+CVP+V +I+D LRDEYA Sbjct 370 DGALRDLVARRIPMFEFAVRSLIPSGDILDNDPHAKVDALRQCVPLVSRIRDYALRDEYA 429 Query 420 RQLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTA----GPPTELAV 475 R+LAGW GW+D +QV+ RVR EA + P GR R A++P A P A Sbjct 430 RRLAGWTGWSDESQVLSRVREEAAKRGMPERGR------RRGAEQPAAPRGVAAPAPGAS 483 Query 476 RPDPRDPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGL 535 RPDP DPTLWPQREALKSALQ+PALAGPVFD+LT E FTHP YAAVRAAI AGGTSAGL Sbjct 484 RPDPADPTLWPQREALKSALQFPALAGPVFDSLTAESFTHPGYAAVRAAIGAAGGTSAGL 543 Query 536 SGAQWLDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEV 595 SGAQW++ VR Q TS S+LI+ELGVEAI DD++LPRYI VLARLQEVW+GRQIAEV Sbjct 544 SGAQWIEAVRDQATSPPASSLINELGVEAINADDERLPRYIGSVLARLQEVWIGRQIAEV 603 Query 596 KSKLQRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA 639 KSKLQRMSP+EQGDEYHALFGDLVAMEAYRRSLLEQASG+DLTA Sbjct 604 KSKLQRMSPVEQGDEYHALFGDLVAMEAYRRSLLEQASGNDLTA 647 >gi|343924088|ref|ZP_08763651.1| DNA primase [Gordonia alkanivorans NBRC 16433] gi|343765893|dbj|GAA10577.1| DNA primase [Gordonia alkanivorans NBRC 16433] Length=662 Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust. Identities = 432/636 (68%), Positives = 518/636 (82%), Gaps = 7/636 (1%) Query 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 ++GRI DRDI AIRE RIED+VGDYV LRRAGADSLKGLCPFH+EKSPSFHVRPNHGHF Sbjct 22 VAGRIPDRDITAIREQTRIEDIVGDYVALRRAGADSLKGLCPFHDEKSPSFHVRPNHGHF 81 Query 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA 120 HCFGCGEGGDVY+F+QK EHVSFVEAVE LADR+G+ I+Y G T+++RDRG+R+RL+AA Sbjct 82 HCFGCGEGGDVYSFLQKQEHVSFVEAVEQLADRLGYQINYEGGGTAIKRDRGTRARLVAA 141 Query 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 NAAAA FY ALQ+ EA AR YL+ER FDAAAA +FGCG+AP+GWD++TK L +GFEF Sbjct 142 NAAAAKFYQAALQTPEAQAARDYLSERDFDAAAAVQFGCGYAPAGWDTMTKALLSQGFEF 201 Query 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 ELEAAGLS+QGR GP+DRFHRRLLWPIR G+++GFGAR+L+DDD + KY+NTPET+ Sbjct 202 SELEAAGLSKQGRKGPIDRFHRRLLWPIRNLGGDIIGFGARKLYDDDNL-GKYMNTPETM 260 Query 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 LYKKS V+FG+D AK+ IAKGHQ VVVEGYTDVMAMHLAGVTTAVASCGTAFG +HLA++ Sbjct 261 LYKKSQVLFGLDHAKKSIAKGHQVVVVEGYTDVMAMHLAGVTTAVASCGTAFGEDHLALI 320 Query 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 RRLMMDDS+FRGE+IY FDGD+AG+AAALKAF+GEQ ++GQ+FVA+APDGMDPC+LR Sbjct 321 RRLMMDDSYFRGEVIYTFDGDDAGKAAALKAFEGEQSISGQTFVAIAPDGMDPCELRQAR 380 Query 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 GD A+RDL+ARR P+FEFAI+ + E DLD+AEGRV ALR VP+V +IKD LRDEYAR Sbjct 381 GDTAVRDLIARRVPMFEFAIKTLLTEHDLDTAEGRVHALRDTVPVVARIKDIALRDEYAR 440 Query 421 QLAGWVGWADVAQVIGRVRGEA---KRTKHPRLGRLGSTTIARAAQRPTA-GPPTELAVR 476 QLAGWVGW +V+QV+GRVR E ++ K A A RP A PT + R Sbjct 441 QLAGWVGWEEVSQVLGRVREEGAKIRKAKGGGDSGRSGRRGAPARNRPEAEAAPT--SAR 498 Query 477 PDPRDPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLS 536 P P DP LWPQREALK+ALQYPA+AG VFD+L VE F P YA VR A+ + GGTS+GL Sbjct 499 PQPNDPRLWPQREALKAALQYPAIAGTVFDSLPVECFDEPAYAIVRQAMISIGGTSSGLG 558 Query 537 GAQWLDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVK 596 GA W+D VR V L++EL VE++ VD+D + RYI VLARLQEVW+G QIA++K Sbjct 559 GAAWVDAVRNAVDDPVIDPLVTELAVESMPVDEDNIARYITSVLARLQEVWVGSQIADIK 618 Query 597 SKLQRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQA 632 S+L+RM+P + D Y+A+FGDLVA+EAYRRSLLEQA Sbjct 619 SRLRRMAPSDDPDGYNAVFGDLVALEAYRRSLLEQA 654 >gi|111018224|ref|YP_701196.1| DNA primase [Rhodococcus jostii RHA1] gi|110817754|gb|ABG93038.1| DNA primase [Rhodococcus jostii RHA1] Length=644 Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust. Identities = 434/638 (69%), Positives = 524/638 (83%), Gaps = 5/638 (0%) Query 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 M+GRI DRD+AAIRE RIED+VG+YV L+RAG DS+KGLCPFH+EKSPSFHVRPNHGH+ Sbjct 1 MAGRIPDRDVAAIRERTRIEDIVGEYVSLKRAGGDSMKGLCPFHDEKSPSFHVRPNHGHY 60 Query 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA 120 HCFGCGEGGDVY+F+QKI+H+SFVEAVE LADR+ +TISY G TSVQRDRG+RSRL+AA Sbjct 61 HCFGCGEGGDVYSFLQKIDHISFVEAVEQLADRLNYTISYEGGGTSVQRDRGTRSRLVAA 120 Query 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 NAAA FY+ LQ +A AR YLTER+FDA AA++FGCG+AP GWD LTKHL KGF+ Sbjct 121 NAAAQEFYSARLQEPDAQAARDYLTERNFDAQAAQQFGCGYAPDGWDILTKHLLGKGFDV 180 Query 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 +ELEAAGLS+ GR G +DRFHRRLLWPIR +G+V+GFGAR+LFDDD M KYVNTPET+ Sbjct 181 KELEAAGLSKAGRRGHIDRFHRRLLWPIRNLSGDVIGFGARKLFDDDTMPGKYVNTPETM 240 Query 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 LYKKS V+FG+DLAKRDIAKGHQAVVVEGYTDVMAMHLAGV TAVA+CGTAFG +HLAML Sbjct 241 LYKKSQVLFGLDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVKTAVAACGTAFGEDHLAML 300 Query 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 RRL+MDDS+FRGE+IY FDGD AG+AAA+KAF+G+QK+AGQ+FVAVAP+GMDPC+LR K Sbjct 301 RRLLMDDSYFRGEIIYTFDGDAAGQAAAMKAFEGDQKMAGQTFVAVAPEGMDPCELRQKS 360 Query 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 GDAA+RDLVARRTP+FEF +++ + E DL++AEGRV ALRR VP+V QIK+ TLRD YA Sbjct 361 GDAAVRDLVARRTPMFEFVVKSILTEHDLETAEGRVEALRRTVPVVAQIKEATLRDSYAV 420 Query 421 QLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAV---RP 477 QL+GWVGW D+A V RVR EA++ R G L + +AA+ P +L V RP Sbjct 421 QLSGWVGWDDIAAVRQRVRDEARKRASTR-GSLPAPPKKKAARDEDQDTP-QLPVGLTRP 478 Query 478 DPRDPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSG 537 P DPTLW QREALK ALQYPA+AG VFD+L VE FTHP Y +R ++ +GGTSAGL G Sbjct 479 RPNDPTLWAQREALKGALQYPAIAGTVFDSLPVETFTHPTYVVIRESMIASGGTSAGLGG 538 Query 538 AQWLDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKS 597 +W+D V + ++L+SEL VE + ++D +PRYI+GV+ARLQEVW+G Q+AE+KS Sbjct 539 GEWVDAVSRGVDDVTAASLVSELAVEPLPAEEDTVPRYISGVIARLQEVWVGEQVAELKS 598 Query 598 KLQRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGD 635 KLQR+SP DE+H+L GDLVA+E YRRSLL+QA GD Sbjct 599 KLQRISPATASDEFHSLLGDLVALEQYRRSLLDQAIGD 636 >gi|312140268|ref|YP_004007604.1| DNA primase dnag [Rhodococcus equi 103S] gi|325676985|ref|ZP_08156656.1| DNA primase [Rhodococcus equi ATCC 33707] gi|311889607|emb|CBH48924.1| DNA primase DnaG [Rhodococcus equi 103S] gi|325552147|gb|EGD21838.1| DNA primase [Rhodococcus equi ATCC 33707] Length=643 Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust. Identities = 443/640 (70%), Positives = 522/640 (82%), Gaps = 10/640 (1%) Query 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 ++GRI DRDIAA+RE RIED+VG+YV L+RAG DS+KGLCPFH+EKSPSFHVRPNHGHF Sbjct 2 VAGRIPDRDIAAVRERTRIEDIVGEYVSLKRAGGDSMKGLCPFHDEKSPSFHVRPNHGHF 61 Query 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA 120 HCFGCGEGGDVY+F+QKIEHVSFVEAVE LADRIG+ ISY G SVQRDRG+R+RL+AA Sbjct 62 HCFGCGEGGDVYSFLQKIEHVSFVEAVEQLADRIGYQISYEGGGPSVQRDRGTRARLVAA 121 Query 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 NAAA FYA L+ +A AR YLTER+FDAAAA +FGCG+AP GWD+LTKHL KGFE Sbjct 122 NAAAQEFYAARLKEPDAQAARDYLTERNFDAAAAAQFGCGYAPDGWDTLTKHLMAKGFEA 181 Query 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 +ELEAAGLS++GR GP+DRFHRRLLWPIR AG+V+GFGAR+LFDDD M KYVNTPET+ Sbjct 182 KELEAAGLSKEGRRGPIDRFHRRLLWPIRNLAGDVIGFGARKLFDDDTMPGKYVNTPETI 241 Query 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 LYKKS+V+FG+DLAKRDIAKGHQAVVVEGYTDVMAMHLAGV TAVASCGTAFG EHLAML Sbjct 242 LYKKSNVLFGLDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVKTAVASCGTAFGDEHLAML 301 Query 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 RRL+MDDS+FRGE+IY FDGD AG+AAA+KAF+G+QK+AGQ+FVA+APDGMDPC+LR K Sbjct 302 RRLLMDDSYFRGEVIYTFDGDAAGQAAAMKAFEGDQKMAGQTFVAIAPDGMDPCELRQKS 361 Query 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 GDAA+RDLVARRTP+FEF +++ +AE DLD+AEGRV ALRR VP+V +IK+PTLRD YA Sbjct 362 GDAAVRDLVARRTPMFEFVVKSLLAEHDLDTAEGRVEALRRTVPVVARIKEPTLRDGYAV 421 Query 421 QLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIAR-----AAQRPTAGPPTELAV 475 QL+GWVGW D+ V RVR EA+ + R G A+ AQ P Sbjct 422 QLSGWVGWDDIPAVRRRVRDEAR-----KFARGGGAPAAKRRPVDPAQVEAFPAPAPGIA 476 Query 476 RPDPRDPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGL 535 RP P DP LWPQR+ALK+ALQYPA+AG VFD+L E FTHP YAAVR A+ AGGTSAGL Sbjct 477 RPRPNDPALWPQRDALKAALQYPAIAGTVFDSLPPESFTHPAYAAVREAVAAAGGTSAGL 536 Query 536 SGAQWLDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEV 595 GA+W+D V + +++ EL V+ + D+D PRYI GVLARLQEVW+G Q+AE+ Sbjct 537 GGAEWVDAVGRAAGEGTVHSIVMELAVDPLPTDEDVAPRYIRGVLARLQEVWVGEQVAEL 596 Query 596 KSKLQRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGD 635 KSKLQR+SP DE+H+L GDLVA+E YRRSLL+QA GD Sbjct 597 KSKLQRISPTTDSDEFHSLLGDLVALEQYRRSLLDQAIGD 636 >gi|262203033|ref|YP_003274241.1| DNA primase [Gordonia bronchialis DSM 43247] gi|262086380|gb|ACY22348.1| DNA primase [Gordonia bronchialis DSM 43247] Length=639 Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/634 (68%), Positives = 516/634 (82%), Gaps = 1/634 (0%) Query 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 M+GRI DRDI AIR+ RIED+VG+YV LRRAGADSLKGLCPFH+EK+PSFHVRPNHGHF Sbjct 1 MAGRIPDRDITAIRDQTRIEDIVGEYVALRRAGADSLKGLCPFHDEKTPSFHVRPNHGHF 60 Query 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA 120 HCFGCGEGGDVY+F+QK EHVSFVEAVE LADRIG+ I+Y G T+++RDRG+R+RL+AA Sbjct 61 HCFGCGEGGDVYSFLQKQEHVSFVEAVEQLADRIGYRINYEGGGTAIKRDRGTRARLVAA 120 Query 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 NAAA FY ALQ+ EA AR YLTER FDAAAA +FGCG+AP GWD+++K L +GFEF Sbjct 121 NAAAHKFYVAALQTPEAQKARDYLTERDFDAAAAAQFGCGYAPDGWDTMSKALLSQGFEF 180 Query 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 EL+AAGLS +GR GP+DRF RRLLWPIR G+++GFGAR+LFDDD M KY+NTPET+ Sbjct 181 SELKAAGLSTEGRKGPIDRFRRRLLWPIRNLGGDIIGFGARKLFDDDTM-GKYMNTPETM 239 Query 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 LYKKS V+FG+D AK++IA+GHQ VVVEGYTDVMAMHL+GVTTAVASCGTAFG +HL+++ Sbjct 240 LYKKSQVLFGLDHAKKNIARGHQVVVVEGYTDVMAMHLSGVTTAVASCGTAFGEDHLSLI 299 Query 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 RRLMMDDS+FRGE+IY FDGD+AG+AAALKAF+GEQ ++GQ+FVA+APDGMDPC+LR Sbjct 300 RRLMMDDSYFRGEVIYTFDGDDAGKAAALKAFEGEQSISGQTFVAIAPDGMDPCELRQAK 359 Query 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 GDAA+RDL+ARR P+FEFAIR + E DLD+AEGRV ALR VP+V +IKD LRDEYAR Sbjct 360 GDAAVRDLIARRVPMFEFAIRTLLTEHDLDTAEGRVHALREAVPVVARIKDIALRDEYAR 419 Query 421 QLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRPDPR 480 QLAGWVGW +V QV+ RVR E + + + R STT+ A + G + RP Sbjct 420 QLAGWVGWEEVGQVLARVREEGAKVQRTSVSRDRSTTVNGARRGRPEGESRPVMARPLAT 479 Query 481 DPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQW 540 DP LWPQREALK+ALQYP +AG VFD+L VE FT P YAAVR A+ GGTS+GL GA W Sbjct 480 DPRLWPQREALKAALQYPGIAGTVFDSLPVECFTEPAYAAVRQAMTALGGTSSGLGGAGW 539 Query 541 LDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKSKLQ 600 +D VR L++EL VE + VD+D +PRYI+GVLARLQEVW+G QIA++KS+L+ Sbjct 540 VDAVRTAVDDQSIEPLVTELAVEGMPVDEDNIPRYISGVLARLQEVWVGAQIADIKSRLR 599 Query 601 RMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASG 634 RM+P E D Y+A+FGDLVA+EAYRRSLLEQA G Sbjct 600 RMAPGEDPDGYNAVFGDLVALEAYRRSLLEQAVG 633 >gi|229490245|ref|ZP_04384087.1| DNA primase [Rhodococcus erythropolis SK121] gi|229322777|gb|EEN88556.1| DNA primase [Rhodococcus erythropolis SK121] Length=639 Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust. Identities = 430/640 (68%), Positives = 516/640 (81%), Gaps = 9/640 (1%) Query 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 M+GRISDRDIAAIRE RIED+VG+YV L+RAG DS+KGLCPFH+EKSPSFHVRPNHG + Sbjct 1 MAGRISDRDIAAIRERTRIEDIVGEYVSLKRAGGDSIKGLCPFHDEKSPSFHVRPNHGLY 60 Query 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA 120 HCFGCGEGGDVY+F+QK++H+SFVEAVE LADR+ +TISY G SVQRDRG+R+RL+AA Sbjct 61 HCFGCGEGGDVYSFLQKMDHISFVEAVEQLADRLSYTISYEGGGPSVQRDRGTRARLIAA 120 Query 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 NAAA FYA L+ +A AR YLTER+FD AAA +FGCG+AP GWD+LTKHL KGFEF Sbjct 121 NAAAQEFYAARLREPDAQAARDYLTERNFDGAAALQFGCGYAPEGWDTLTKHLMSKGFEF 180 Query 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 +ELEAAGLS++GR GP+DRFHRRLLWPIR+ AG+V+GFGAR+LFDDD M KYVNTPET+ Sbjct 181 KELEAAGLSKEGRRGPIDRFHRRLLWPIRSVAGDVIGFGARKLFDDDTMPGKYVNTPETI 240 Query 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 LYKKS V+FG+DLAKRDIAKGHQAVVVEGYTDVMAMHLAGV TAVASCGTAFG EHLAML Sbjct 241 LYKKSQVLFGLDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVKTAVASCGTAFGEEHLAML 300 Query 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 RRL+MDDS+FRGE+IY FDGD AG+AAA+KAF+G+QK+AGQ+FVAVAPDGMDPCDLRLK Sbjct 301 RRLLMDDSYFRGEIIYTFDGDAAGQAAAMKAFEGDQKMAGQTFVAVAPDGMDPCDLRLKS 360 Query 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 GDAA+RDLVARRTP+FEF +++ + E DL++AEGRV ALRR VP+V QIK+ TLRD YA Sbjct 361 GDAAVRDLVARRTPMFEFVVKSILTEHDLETAEGRVEALRRTVPVVAQIKESTLRDSYAN 420 Query 421 QLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAV----- 475 L GWVGW D+ V RVR EA++ R GS+ + Q A LA+ Sbjct 421 LLCGWVGWDDLPSVRRRVRDEARKRASTR----GSSPAPKRRQVVEAPAADALALPIGIS 476 Query 476 RPDPRDPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGL 535 RP P DP L QR LK+ALQ+P +AG VFD+L E FTHP Y +R A+ AGGTS GL Sbjct 477 RPRPNDPALSTQRAVLKAALQHPGIAGSVFDSLPPETFTHPAYVVIRQAMADAGGTSKGL 536 Query 536 SGAQWLDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEV 595 GA+W+++V + ++++SEL VE + D+D +PRYI GVLARLQE W+G Q+A++ Sbjct 537 GGAEWIEVVTKGVEDMTVASVVSELAVEPMPCDEDTVPRYINGVLARLQEAWVGEQVADL 596 Query 596 KSKLQRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGD 635 KSKLQR+SP +EY++LFGDLVA+E YRR L EQA GD Sbjct 597 KSKLQRVSPAAAPEEYNSLFGDLVALEQYRRQLREQAVGD 636 >gi|226360349|ref|YP_002778127.1| DNA primase [Rhodococcus opacus B4] gi|226238834|dbj|BAH49182.1| DNA primase [Rhodococcus opacus B4] Length=644 Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust. Identities = 432/638 (68%), Positives = 524/638 (83%), Gaps = 5/638 (0%) Query 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 M+GRI DRD+AAIRE RIED+VG+YV L+RAG DS+KGLCPFH+EKSPSFHVRPNHGHF Sbjct 1 MAGRIPDRDVAAIRERTRIEDIVGEYVSLKRAGGDSMKGLCPFHDEKSPSFHVRPNHGHF 60 Query 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA 120 HCFGCGEGGDVY+F+QKI+H+SFVEAVE LADR+ +TISY G TSVQRDRG+R+RL+AA Sbjct 61 HCFGCGEGGDVYSFLQKIDHISFVEAVEQLADRLNYTISYEGGGTSVQRDRGTRARLVAA 120 Query 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 NAAA FY+ LQ +A AR YLTER+FDAAAA++FGCG+AP GWD LTKHL KGF+ Sbjct 121 NAAAQEFYSARLQEPDAQAARDYLTERNFDAAAAQQFGCGYAPDGWDVLTKHLLGKGFDV 180 Query 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 +ELEAAGLS+ GR G +DRFHRRLLWPIR +G+V+GFGAR+LFDDD M KYVNTPET+ Sbjct 181 KELEAAGLSKAGRRGHIDRFHRRLLWPIRNLSGDVIGFGARKLFDDDTMPGKYVNTPETM 240 Query 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 LYKKS V+FG+DLAKR+IAKGHQAVVVEGYTDVMAMHLAGV TAVA+CGTAFG +HL+ML Sbjct 241 LYKKSQVLFGLDLAKREIAKGHQAVVVEGYTDVMAMHLAGVKTAVAACGTAFGEDHLSML 300 Query 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 RRL+MDDS+FRGE+IY FDGD AG+AAA+KAF+G+QK+AGQ+FVAVAP+GMDPC+LR K Sbjct 301 RRLLMDDSYFRGEIIYTFDGDAAGQAAAMKAFEGDQKMAGQTFVAVAPEGMDPCELRQKS 360 Query 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 GDAA+RDLVARRTP+FEF +++ + E DL++AEGRV ALRR VP+V QIK+ TLRD YA Sbjct 361 GDAAVRDLVARRTPMFEFVVKSILTEHDLETAEGRVEALRRTVPVVAQIKEATLRDSYAV 420 Query 421 QLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAV---RP 477 QL+GWVGW D+A V RVR EA++ R G + + +AA+ P +L V RP Sbjct 421 QLSGWVGWDDIAAVRQRVRDEARKRASTR-GSVSAPPKKKAARGDNKDAP-QLPVGLSRP 478 Query 478 DPRDPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSG 537 P DPTLW QREALK ALQYPA+AG VFD+L VE FTHP Y +R ++ AGG SAGL G Sbjct 479 RPNDPTLWAQREALKGALQYPAIAGTVFDSLPVETFTHPTYVVIRESMIAAGGASAGLGG 538 Query 538 AQWLDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKS 597 +W+D V + ++L+SEL VE + ++D +PRYI+GV+ARLQEVW+G Q+AE+KS Sbjct 539 GEWVDAVGRGVEDVTAASLVSELAVEPLPAEEDTVPRYISGVIARLQEVWVGEQVAELKS 598 Query 598 KLQRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGD 635 KLQR+SP DE+H+L GDLVA+E YRRSLL+QA GD Sbjct 599 KLQRISPATASDEFHSLLGDLVALEQYRRSLLDQAIGD 636 >gi|226307185|ref|YP_002767145.1| DNA primase [Rhodococcus erythropolis PR4] gi|226186302|dbj|BAH34406.1| DNA primase [Rhodococcus erythropolis PR4] Length=641 Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust. Identities = 429/640 (68%), Positives = 516/640 (81%), Gaps = 9/640 (1%) Query 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 ++GRISDRDIAAIRE RIED+VG+YV L+RAG DS+KGLCPFH+EKSPSFHVRPNHG + Sbjct 3 VAGRISDRDIAAIRERTRIEDIVGEYVSLKRAGGDSIKGLCPFHDEKSPSFHVRPNHGLY 62 Query 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA 120 HCFGCGEGGDVY+F+QK++H+SFVEAVE LADR+ +TISY G SVQRDRG+R+RL+AA Sbjct 63 HCFGCGEGGDVYSFLQKMDHISFVEAVEQLADRLSYTISYEGGGPSVQRDRGTRARLIAA 122 Query 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 NAAA FYA L+ +A AR YLTER+FD AAA +FGCG+AP GWD+LTKHL KGFEF Sbjct 123 NAAAQEFYAARLREPDAQAARDYLTERNFDGAAALQFGCGYAPEGWDTLTKHLMSKGFEF 182 Query 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 +ELEAAGLS++GR GP+DRFHRRLLWPIR+ AG+V+GFGAR+LFDDD M KYVNTPET+ Sbjct 183 KELEAAGLSKEGRRGPIDRFHRRLLWPIRSVAGDVIGFGARKLFDDDTMPGKYVNTPETI 242 Query 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 LYKKS V+FG+DLAKRDIAKGHQAVVVEGYTDVMAMHLAGV TAVASCGTAFG EHLAML Sbjct 243 LYKKSQVLFGLDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVKTAVASCGTAFGEEHLAML 302 Query 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 RRL+MDDS+FRGE+IY FDGD AG+AAA+KAF+G+QK+AGQ+FVAVAPDGMDPCDLRLK Sbjct 303 RRLLMDDSYFRGEIIYTFDGDAAGQAAAMKAFEGDQKMAGQTFVAVAPDGMDPCDLRLKS 362 Query 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 GDAA+RDLVARRTP+FEF +++ + E DL++AEGRV ALRR VP+V QIK+ TLRD YA Sbjct 363 GDAAVRDLVARRTPMFEFVVKSILTEHDLETAEGRVEALRRTVPVVAQIKESTLRDSYAN 422 Query 421 QLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAV----- 475 L GWVGW D+ V RVR EA++ R GS+ + Q A LA+ Sbjct 423 LLCGWVGWDDLPSVRRRVRDEARKRASTR----GSSPAPKRRQVVEAPAADALALPIGIS 478 Query 476 RPDPRDPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGL 535 RP P DP L QR LK+ALQ+P +AG VFD+L E FTHP Y +R A+ AGGTS GL Sbjct 479 RPRPNDPALSTQRAVLKAALQHPGIAGSVFDSLPPETFTHPAYVVIRQAMADAGGTSKGL 538 Query 536 SGAQWLDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEV 595 GA+W+++V + ++++SEL VE + D+D +PRYI GVLARLQE W+G Q+A++ Sbjct 539 GGAEWIEVVTKGVEDMTVASVVSELAVEPMPCDEDTVPRYINGVLARLQEAWVGEQVADL 598 Query 596 KSKLQRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGD 635 KSKLQR+SP +EY++LFGDLVA+E YRR L EQA GD Sbjct 599 KSKLQRVSPAAAPEEYNSLFGDLVALEQYRRQLREQAVGD 638 >gi|333918887|ref|YP_004492468.1| DNA primase [Amycolicicoccus subflavus DQS3-9A1] gi|333481108|gb|AEF39668.1| DNA primase [Amycolicicoccus subflavus DQS3-9A1] Length=633 Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust. Identities = 419/636 (66%), Positives = 515/636 (81%), Gaps = 11/636 (1%) Query 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 M+GRI +RDIAAIR+ I+++VG+YV LRRAG SLKGLCPFH+EK+PSFHVRP+HGHF Sbjct 1 MAGRIPERDIAAIRDRVPIDELVGEYVSLRRAGT-SLKGLCPFHDEKTPSFHVRPSHGHF 59 Query 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA 120 HCFGCGEGGD+Y+F+QKIEH+SF EAVE LADR G+ I+Y G TSVQRDRG+R+RL+AA Sbjct 60 HCFGCGEGGDIYSFLQKIEHISFAEAVEQLADRSGYRITYEGGGTSVQRDRGTRTRLVAA 119 Query 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 NAAA FYA+ L + EA ARQYL ER FD AAA +FGCG+APSGWDSLTKHL +GFEF Sbjct 120 NAAAQQFYARQLSTPEAEVARQYLKERHFDGAAAVQFGCGYAPSGWDSLTKHLLTQGFEF 179 Query 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 +ELEAAGLS+QG+ GP+DRFHRRLLWPIR +G+V+GFGARRLFDDD +AKY+NTPET+ Sbjct 180 KELEAAGLSKQGKRGPIDRFHRRLLWPIRNLSGDVIGFGARRLFDDDVQQAKYLNTPETV 239 Query 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 LYKKS V+FG+DLAKR+IAK HQ V+VEGYTDVMAMHLAGVTTAVA+CGTAFG EH+ +L Sbjct 240 LYKKSQVLFGLDLAKREIAKSHQVVIVEGYTDVMAMHLAGVTTAVAACGTAFGDEHVGLL 299 Query 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 RRL+MDDS+FRGE+I+ FDGDEAG+ AALKAF+G+QK+AG++FVAVAP GMDPCDLR++ Sbjct 300 RRLLMDDSYFRGEVIFTFDGDEAGQKAALKAFEGDQKVAGKTFVAVAPAGMDPCDLRVER 359 Query 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 GDAA+RDLVARR+PLF F +R+ + E DL+++EGRV ALRR VP+V +IKD LRD+YA+ Sbjct 360 GDAAVRDLVARRSPLFAFVVRSILGEHDLETSEGRVEALRRAVPVVAKIKDTALRDDYAK 419 Query 421 QLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRPDPR 480 QLA WVGW AQV RVR A+ +H G T R + + A RPDPR Sbjct 420 QLADWVGWEKEAQVRQRVREYAQ--QHSGGAAQGPTQSKRNGK-------SGAASRPDPR 470 Query 481 DPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQW 540 DP++WP+REALK+ LQYP +AG VFD+L E F HP Y +R A+ AGG +G +GA W Sbjct 471 DPSVWPEREALKAGLQYPGVAGTVFDSLPDESFRHPAYLRIRRAMADAGGAGSGHAGATW 530 Query 541 LDMV-RQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKSKL 599 L++V R+ +L+SEL VE++ V++ +PRYI GVLARLQEVW+GRQ+A++KS+L Sbjct 531 LELVMRELDDDDPLRSLVSELAVESMPVEEASVPRYIGGVLARLQEVWVGRQVADLKSRL 590 Query 600 QRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGD 635 QRMSP E EYHALFGDLVA+E YRRSLL +A GD Sbjct 591 QRMSPSEDPGEYHALFGDLVALEEYRRSLLHKAVGD 626 >gi|326381693|ref|ZP_08203387.1| DNA primase [Gordonia neofelifaecis NRRL B-59395] gi|326199940|gb|EGD57120.1| DNA primase [Gordonia neofelifaecis NRRL B-59395] Length=636 Score = 837 bits (2162), Expect = 0.0, Method: Compositional matrix adjust. Identities = 430/635 (68%), Positives = 517/635 (82%), Gaps = 10/635 (1%) Query 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 M GRI DRDIAAIRE RIED+VGDYV LRRAGAD L GLCPFH+EK+PSFHVRP+HGHF Sbjct 1 MPGRIPDRDIAAIREQTRIEDIVGDYVTLRRAGADRLTGLCPFHDEKTPSFHVRPHHGHF 60 Query 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA 120 HCFGCGEGGDVY F+QK+EHVSFVEAVE LADRIG+TI+Y G T+++RDRG+R+RL+AA Sbjct 61 HCFGCGEGGDVYTFLQKLEHVSFVEAVEQLADRIGYTINYEGGGTAIKRDRGTRARLVAA 120 Query 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 NAAA +YA+ L + +A AR +LTER FD AA FGCG+AP+GWD++TK L ++GF+F Sbjct 121 NAAAQKYYAEQLATPDAQVARDFLTERGFDGNAAAHFGCGYAPAGWDTMTKALLKQGFQF 180 Query 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 ELEAAGLS+QGR GP+DRFHRRLLWPIR G+V+GFGAR+LFDDD + KY+NTPET+ Sbjct 181 SELEAAGLSKQGRKGPIDRFHRRLLWPIRNLGGDVIGFGARKLFDDDNL-GKYMNTPETM 239 Query 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 LYKKS V+FG+DLAKRDIAKGHQ V+VEGYTDVMAMH AGVTTAVASCGTAFG +HLA++ Sbjct 240 LYKKSQVLFGLDLAKRDIAKGHQVVIVEGYTDVMAMHQAGVTTAVASCGTAFGEDHLALI 299 Query 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 RRLMMDDS+FRGE+IY FDGD AG+AAALKAF+GEQ +AGQ+FVAVAPDGMDPC+LR + Sbjct 300 RRLMMDDSYFRGEVIYTFDGDAAGQAAALKAFEGEQSIAGQTFVAVAPDGMDPCELRQRS 359 Query 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 GD A+RDL+ARR P+F+FAI+ IA+ +LD+AEGRVAALR VP+V +I+D LRDEYAR Sbjct 360 GDPAVRDLIARRIPMFQFAIKTLIAQQNLDTAEGRVAALRETVPVVARIRDVALRDEYAR 419 Query 421 QLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTA--GPPTELAVRPD 478 QLAGWVGW DVAQV+ RVRG+AKR G+ G + RP A PPT RP Sbjct 420 QLAGWVGWDDVAQVLSRVRGDAKRYGR---GKGGHSRQQSTRNRPEAMSAPPT---ARPL 473 Query 479 PRDPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGA 538 P DP LWPQREALK+ALQYPA+AG VFD+L E FT P Y A+R +I AGG ++GL GA Sbjct 474 PNDPRLWPQREALKAALQYPAIAGTVFDSLPGECFTDPSYLAIRESIAAAGGAASGLGGA 533 Query 539 QWLDMVRQQTT-STVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKS 597 W+D V + L++EL VE + V+DD++P+YI+ VLAR QE+W+G QIA++KS Sbjct 534 AWVDAVHNGVVDDPAVAPLVTELAVEPLPVEDDRVPQYISSVLARSQEIWVGSQIADIKS 593 Query 598 KLQRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQA 632 KL+RMSP D Y+ALFGDLVA+EAYRRSLLEQA Sbjct 594 KLRRMSPGNDPDGYNALFGDLVALEAYRRSLLEQA 628 >gi|54023437|ref|YP_117679.1| DNA primase [Nocardia farcinica IFM 10152] gi|54014945|dbj|BAD56315.1| putative DNA primase [Nocardia farcinica IFM 10152] Length=635 Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust. Identities = 430/642 (67%), Positives = 504/642 (79%), Gaps = 11/642 (1%) Query 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 M+GR+ DRDIAAIR+ RIEDVVG+YV L+RAGADS+KGLCPFH+EKSPSFHVRPNHG F Sbjct 1 MAGRLPDRDIAAIRDRVRIEDVVGEYVALKRAGADSMKGLCPFHDEKSPSFHVRPNHGLF 60 Query 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA 120 HCFGCGEGGDVY F+QKIEH+ FVEAVE LADR+G+ I+Y G TSVQRDRG+R+RL+AA Sbjct 61 HCFGCGEGGDVYKFLQKIEHIGFVEAVEQLADRVGYQINYEGGGTSVQRDRGTRARLVAA 120 Query 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 NAAA FY L EA AR+YLT+R FDAAAAR FGCG+AP+GWD+LTKHL RKGFEF Sbjct 121 NAAAHEFYMAQLAEPEAEAARKYLTDRDFDAAAARLFGCGYAPAGWDTLTKHLLRKGFEF 180 Query 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 +ELEAAGLSRQG+ GP+DRFHRRLLWPIR GEV+GFGAR+LFDDD M KYVNTPETL Sbjct 181 KELEAAGLSRQGKRGPIDRFHRRLLWPIRNLGGEVIGFGARKLFDDDTMPGKYVNTPETL 240 Query 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 LYKKS V+FG+D AKR+IAK QAVVVEGYTDVMAMHLAGV TAVASCGTAFG EH+A+L Sbjct 241 LYKKSQVLFGLDHAKREIAKSRQAVVVEGYTDVMAMHLAGVKTAVASCGTAFGDEHMAIL 300 Query 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 RRL+MDD+F+RGE+IY FDGD AG+AAA+KAF G+QKLAGQ+++A+APDG DPC+LR + Sbjct 301 RRLLMDDNFWRGEIIYTFDGDAAGQAAAIKAFSGDQKLAGQTYIAIAPDGQDPCELRQRS 360 Query 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 GDAA+RDLVARRTPL+EF IR +AE DLD+ EG+V ALRR VP+V QIKD R YA Sbjct 361 GDAAVRDLVARRTPLYEFVIRGLLAEHDLDTVEGQVEALRRAVPVVAQIKDNATRKAYAT 420 Query 421 QLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRPDPR 480 +LAGWVGW D+ V+ RV EAKR + R A A+ P A RP+P Sbjct 421 RLAGWVGWDDIQTVVRRVGEEAKRGRTGIAPRRAPAAPAEVAEHPAA--------RPNPN 472 Query 481 DPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQW 540 DP L PQR++L +ALQYPA+AG VFDAL E FTHP YAA+R I AGG S GLSGA+W Sbjct 473 DPVLLPQRQSLCAALQYPAIAGAVFDALEPEVFTHPAYAAIRTMIAEAGGASCGLSGAEW 532 Query 541 LDMVRQQTTSTVTSALISELGVEAIQVDD-DKLPRYIAGVLARLQEVWLGRQIAEVKSKL 599 ++ V T AL+SEL + V + +PR+I GVLAR QE ++GRQIA +KSKL Sbjct 533 VNAVADATDDLTLRALVSELAGAQLPVKSVNDIPRFITGVLARAQEAYVGRQIATLKSKL 592 Query 600 QRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASG--DDLTA 639 QR+S EQ DEY ALFGDLVA+E YR+SL QA G DD A Sbjct 593 QRLSANEQTDEYLALFGDLVALEQYRKSLEAQAMGNSDDFAA 634 >gi|296140433|ref|YP_003647676.1| DNA primase [Tsukamurella paurometabola DSM 20162] gi|296028567|gb|ADG79337.1| DNA primase [Tsukamurella paurometabola DSM 20162] Length=641 Score = 804 bits (2077), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/641 (64%), Positives = 500/641 (79%), Gaps = 9/641 (1%) Query 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 M GRI +RDIAAIR+ ARIEDVVG+YV LR AG S+KGLCPFH+EK+PSFHVRP G F Sbjct 1 MVGRIPERDIAAIRDRARIEDVVGEYVALRPAGVGSMKGLCPFHDEKTPSFHVRPTQGFF 60 Query 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA 120 HCFGCGEGGDV +F+QKIEHV FVEAVE LAD++G ISY G ++DRG+R RL+AA Sbjct 61 HCFGCGEGGDVISFLQKIEHVPFVEAVEQLADKVGIQISYEGGTPGPKQDRGTRMRLVAA 120 Query 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 NAAA FYA+ L++ EA ARQYL +R F A A +GCG+APSGWD++TK L R+GFE Sbjct 121 NAAAQKFYAEQLRTPEAETARQYLQDRDFTAEDAEFYGCGYAPSGWDTMTKALLRQGFEV 180 Query 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 +ELEAAGL++QG+ GP+DRFHRRLLWPI+ G+V+GFGAR+LFDDD + KY+NT ET+ Sbjct 181 KELEAAGLTKQGQRGPIDRFHRRLLWPIKNLGGDVIGFGARKLFDDDNL-GKYMNTTETM 239 Query 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 LYKKS V+FG+D AK+ IAKGHQ VVVEGYTDVMAMH AGV TAVASCGTAFG +H++++ Sbjct 240 LYKKSQVLFGLDHAKKHIAKGHQVVVVEGYTDVMAMHAAGVETAVASCGTAFGEDHVSLV 299 Query 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 RRLMMDDS+FRGE+IY FDGDEAGRAAA+KAFDG+QK+AG++FVAVAPDGMDPC+LR K Sbjct 300 RRLMMDDSYFRGEVIYTFDGDEAGRAAAMKAFDGDQKIAGRTFVAVAPDGMDPCELRQKH 359 Query 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 GD A+RDL+A+R P+FEFA++ I+E DLD+AEGRV ALRR VP+V +IKD LRDEYAR Sbjct 360 GDEAVRDLIAQRVPMFEFAVKTLISEFDLDTAEGRVHALRRSVPVVARIKDMALRDEYAR 419 Query 421 QLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLG------STTIARAAQRPTAGPPTELA 474 QLAGWVGW DV QV+ RVR E+ R + GR G S R + P Sbjct 420 QLAGWVGWDDVGQVLRRVREESARIRRGE-GRPGPGAPAPSNNRFREPENPVPQARPTGP 478 Query 475 VRPDPRDPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAG 534 RP+P DP LW QRE LK ALQ PALAG VFDAL+ + FT P Y A+R AI+ AGG +AG Sbjct 479 QRPNPTDPVLWVQREVLKCALQAPALAGTVFDALSDDMFTDPAYRAIRLAIEGAGGIAAG 538 Query 535 LSGAQWLDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAE 594 L GA+W+D V + V AL++EL VE ++V + PRY+ VLARLQEVW+G Q+A+ Sbjct 539 LGGAEWVDTVVRHADGPVLEALVTELAVEPLEVQGEPSPRYVESVLARLQEVWVGGQVAD 598 Query 595 VKSKLQRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGD 635 +KSKL+RMSP D+Y+ LFGDLVA+E+YR+SLL+ A GD Sbjct 599 LKSKLKRMSP-NADDDYNRLFGDLVALESYRQSLLKLAVGD 638 >gi|300788424|ref|YP_003768715.1| DNA primase [Amycolatopsis mediterranei U32] gi|299797938|gb|ADJ48313.1| DNA primase [Amycolatopsis mediterranei U32] gi|340530027|gb|AEK45232.1| DNA primase [Amycolatopsis mediterranei S699] Length=637 Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust. Identities = 386/633 (61%), Positives = 475/633 (76%), Gaps = 4/633 (0%) Query 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 ++GRI + DIA +RE RI++VVG+YV LRRAG SLKGLCPFHNEK+PSF+VRP HG F Sbjct 4 VAGRIRESDIAEVRERNRIDEVVGEYVALRRAGGGSLKGLCPFHNEKTPSFNVRPTHGTF 63 Query 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA 120 HCFGCGEGGDV F+QKI+ ++FVEAVE LADR+G ++Y G ++QRDRGSR+RL+ A Sbjct 64 HCFGCGEGGDVIKFVQKIDLITFVEAVERLADRVGIRLTYEGGGATIQRDRGSRTRLVEA 123 Query 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 + A FYA+ L +DEA PAR +L+ER FDAA A+ FGCG+AP GWD LTK L +GFE Sbjct 124 HRLAQEFYAEQLVTDEARPARDFLSERGFDAAMAKTFGCGYAPGGWDKLTKFLLNRGFEV 183 Query 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 +EL AGLS++G+ GPMDRFHRRL+WPIR +VVGFGARRLFDDD + AKY+NT E+ Sbjct 184 KELLTAGLSKEGQRGPMDRFHRRLVWPIRDVGNDVVGFGARRLFDDDRISAKYLNTAESP 243 Query 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 +YKKS VMFG+DLAKR+IAK HQ VVVEGYTDVMAMH +GV TAVAS GTAFG +H+ +L Sbjct 244 IYKKSQVMFGLDLAKREIAKRHQVVVVEGYTDVMAMHASGVPTAVASSGTAFGEDHMKVL 303 Query 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 RRLMMDD FRGE+I+ FDGDEAG+ AALKAF+G+Q AGQ+++AVAPDGMDPC+LRL Sbjct 304 RRLMMDDDAFRGEVIFTFDGDEAGQKAALKAFEGDQTFAGQTYIAVAPDGMDPCELRLAK 363 Query 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 GD+A++DLVARRTPLFEF IR+ + DLDS +G+VAAL++ VPMV IKD RD YA Sbjct 364 GDSAVKDLVARRTPLFEFVIRSTLKNYDLDSVDGQVAALQKTVPMVASIKDRAARDGYAS 423 Query 421 QLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRPDPR 480 +LA WVGW DVAQV+ RVRG A T R G+ A P + RP P+ Sbjct 424 KLAWWVGWQDVAQVVNRVRGSAGATDK----RGGAPLRQPARVGAPEAPAAQDVARPAPK 479 Query 481 DPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQW 540 DP QREALK+ALQ PA+AGP +DAL +E FTHP Y AV A+ AGG +GL+G Sbjct 480 DPRFAVQREALKAALQQPAIAGPEYDALPLEAFTHPVYVAVHEAVLKAGGAGSGLTGPAL 539 Query 541 LDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKSKLQ 600 LD ++SEL VE +Q D+ RYI+ +LARLQE +GRQIAE+K KLQ Sbjct 540 LDAAAPHCPEGTVRRVLSELAVEPLQAKDEVDSRYISSILARLQEGLVGRQIAEIKGKLQ 599 Query 601 RMSPIEQGDEYHALFGDLVAMEAYRRSLLEQAS 633 R+SP+E D+Y ALFGDLVA+E Y++SL EQA+ Sbjct 600 RLSPVEAPDDYRALFGDLVALEQYKKSLGEQAA 632 >gi|302528808|ref|ZP_07281150.1| DNA primase [Streptomyces sp. AA4] gi|302437703|gb|EFL09519.1| DNA primase [Streptomyces sp. AA4] Length=637 Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/633 (62%), Positives = 476/633 (76%), Gaps = 0/633 (0%) Query 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 M+GRI + DIA +RE RI++VVG+YV LRRAG SLKGLCPFH+EK+PSF+VRP HG F Sbjct 1 MAGRIRESDIAEVRERNRIDEVVGEYVALRRAGGGSLKGLCPFHDEKTPSFNVRPTHGTF 60 Query 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA 120 HCFGCGEGGDV FIQKI+ VSFVEAVE LADR+G ++Y G SVQRDRG+RSRL+ A Sbjct 61 HCFGCGEGGDVIKFIQKIDLVSFVEAVERLADRVGIRLTYEGGGASVQRDRGTRSRLIEA 120 Query 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 + AAA FY + L +DEA AR +LTER FDAAAA++FGCGFAP GWD LTKHL +GFE Sbjct 121 HRAAAEFYVEQLGTDEARAARDFLTERGFDAAAAKQFGCGFAPGGWDKLTKHLLNRGFEV 180 Query 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 +EL A+GLS++G+ GP+DRFHRRL+WPIR +VVGFGARRLFDDD + AKY+NT ET Sbjct 181 KELIASGLSKEGQRGPIDRFHRRLVWPIRDVGNDVVGFGARRLFDDDRISAKYLNTSETP 240 Query 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 +YKKS VMFG+D AKR+IAK HQ VVVEGYTDVMAMH AGV TAVAS GTAFG +H+ +L Sbjct 241 IYKKSHVMFGLDQAKREIAKRHQVVVVEGYTDVMAMHAAGVPTAVASSGTAFGEDHMKVL 300 Query 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 RRLMMDD FRGE+I+ FDGDEAG+ AALKAF+G+Q AGQ+++AVAPDGMDPC+LR+ Sbjct 301 RRLMMDDDAFRGEVIFTFDGDEAGQKAALKAFEGDQTFAGQTYIAVAPDGMDPCELRIAK 360 Query 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 GDAA+RDLVARRTPLFEF I++ + + DLDS +G+VAAL++ VPMV IKD RD YA Sbjct 361 GDAAVRDLVARRTPLFEFVIKSMLKQFDLDSVDGQVAALQKTVPMVAAIKDRASRDGYAS 420 Query 421 QLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRPDPR 480 +LA WVGW DVAQV+ RVRG A + A + P P + RP P Sbjct 421 KLAWWVGWQDVAQVVNRVRGAAGAAARRGPVEVQPRRSAARQEAPAPEPEKQDLPRPAPN 480 Query 481 DPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQW 540 DP QREALK+ALQ PA+AGP +D+L E FTHP Y AV A+ AGG ++GL+G Sbjct 481 DPRFVGQREALKAALQQPAIAGPEYDSLPEEAFTHPVYVAVHLAVLKAGGAASGLTGPAL 540 Query 541 LDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKSKLQ 600 LD ++SEL VE ++ + RYI+GVLA +QE +GRQI E+KSKLQ Sbjct 541 LDAASAHCPEGTVRRVLSELAVEPLRALGEVDSRYISGVLAGVQENLVGRQIGEIKSKLQ 600 Query 601 RMSPIEQGDEYHALFGDLVAMEAYRRSLLEQAS 633 R+SP+E D+Y ALFGDLVA+E YR+SL EQA+ Sbjct 601 RLSPVEAPDDYRALFGDLVALEQYRKSLREQAA 633 >gi|319947857|ref|ZP_08022044.1| DNA primase [Dietzia cinnamea P4] gi|319438463|gb|EFV93396.1| DNA primase [Dietzia cinnamea P4] Length=675 Score = 774 bits (1999), Expect = 0.0, Method: Compositional matrix adjust. Identities = 400/676 (60%), Positives = 489/676 (73%), Gaps = 49/676 (7%) Query 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 M+GRI ++DIAAIRE RIE++VG+YV L+ AGADSLKGL PF +EK+PSFHVRP HG+F Sbjct 1 MAGRIPEQDIAAIRERTRIEEIVGEYVALKPAGADSLKGLSPFKDEKTPSFHVRPQHGYF 60 Query 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA 120 HCF GEGGDV+AF+ K+EH+ FVEAVE LADRIG+ ISY G VQRDRG+RSRL A Sbjct 61 HCFSTGEGGDVFAFLMKMEHIGFVEAVEQLADRIGYRISYEGGGQVVQRDRGTRSRLAQA 120 Query 121 NAAAAAFYAQALQSD-EAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFE 179 NAAA FYA+ L D EA AR +LT+R FD A A+ FGCG+AP+GWD+++KHL R+GFE Sbjct 121 NAAAQKFYAERLAQDPEAETARTFLTDRGFDMAQAQHFGCGYAPAGWDTMSKHLMRQGFE 180 Query 180 FEELEAAGLSRQGRHGPM-DRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPE 238 +ELEAAGLS+ G + DRFHRRLLWPIR AGEV+GFGAR+LF+DD + KY+NTPE Sbjct 181 PKELEAAGLSKTSSRGTLIDRFHRRLLWPIRNLAGEVIGFGARKLFEDDTL-GKYMNTPE 239 Query 239 TLLYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLA 298 T+LYKKS V+FG+DLAKR+IA +AVVVEGYTDVMAMH AGVTTAVA+CGTAFG +HL+ Sbjct 240 TMLYKKSQVLFGLDLAKREIASQRRAVVVEGYTDVMAMHAAGVTTAVAACGTAFGEDHLS 299 Query 299 MLRRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRL 358 LRRLM+DD++FRGE+IY FDGDEAG+ AAL+AF G+Q+ +G++FVAVAP G+DPCDLR Sbjct 300 TLRRLMLDDNYFRGEIIYTFDGDEAGKKAALRAFSGDQQFSGRTFVAVAPPGLDPCDLRQ 359 Query 359 KCGDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEY 418 GDAA+RDLV+ R P+FEFAIR+ + + DLD AEGRV ALRR VP+V I+D +LRDEY Sbjct 360 TKGDAAVRDLVSARVPMFEFAIRSMLEDYDLDHAEGRVEALRRTVPVVADIRDSSLRDEY 419 Query 419 ARQLAGWVGWADVAQVIGRVRGEAKRTKHPRLG--------------------------- 451 ARQLAGWVGW D A V+ RVR E+++ R Sbjct 420 ARQLAGWVGWDDPATVVRRVREESRKKGRARSAGAGPGPRRRGPGGPGGGARPGWDAAER 479 Query 452 -------------RLGSTTIARAAQRPTAGPPTELAVRPDPRDPTLWPQREALKSALQYP 498 +G R + P P P P DP LWPQREA+K+ALQYP Sbjct 480 AGGGRGRGGYDDDEVGGGDAPRTPEVPKGVPI------PAPGDPVLWPQREAVKAALQYP 533 Query 499 ALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQWLDMVRQQTTSTVTSALIS 558 LAGP+FD+L E +THP YAA+ A+ AGG SAG SG W+ V Q L+ Sbjct 534 GLAGPLFDSLPDECYTHPAYAAIAEALSRAGGCSAGKSGVNWVSEVSQGLEDEGLRRLVG 593 Query 559 ELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKSKLQRMSPIEQGDEYHALFGDL 618 L VE ++V ++ LPRYI+GVLARLQEVW+ QIA++KSK+QRMSP E + Y ALFGDL Sbjct 594 VLAVETLRVSEEALPRYISGVLARLQEVWVSGQIADLKSKVQRMSPAEDPEGYSALFGDL 653 Query 619 VAMEAYRRSLLEQASG 634 VA+E YRR LLEQA G Sbjct 654 VALEEYRRGLLEQAVG 669 >gi|256375413|ref|YP_003099073.1| DNA primase [Actinosynnema mirum DSM 43827] gi|255919716|gb|ACU35227.1| DNA primase [Actinosynnema mirum DSM 43827] Length=629 Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust. Identities = 380/639 (60%), Positives = 476/639 (75%), Gaps = 23/639 (3%) Query 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 M+GRI + DIA +R+ + IEDVVGD+V LRRAG SLKGLCPFH+EKSPSF+VRP+HG F Sbjct 1 MAGRIRETDIALVRDRSSIEDVVGDHVSLRRAGGGSLKGLCPFHDEKSPSFNVRPSHGTF 60 Query 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA 120 HCFGCGEGGDV AFI KIEH+ FVE+VE LADR G ++Y G ++QRDRG+RSRLL A Sbjct 61 HCFGCGEGGDVIAFIMKIEHLGFVESVERLADRAGIQLTYEGGGATIQRDRGTRSRLLEA 120 Query 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 + AAA FYA+ L + +A PAR++L +R FD AAAR+FGCGFAP GWD LTKHL +GFE Sbjct 121 HRAAAEFYAEQLATPDAMPAREFLAQRGFDEAAARQFGCGFAPHGWDKLTKHLLGRGFEL 180 Query 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 EL A L+++GR GP+DRFHRRLLWPIR G+VVGFGARR+FDDD ++AKY+NT E+ Sbjct 181 TELIKAQLTKEGRQGPIDRFHRRLLWPIRDLGGDVVGFGARRIFDDDPIQAKYLNTSESP 240 Query 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 +YKKS V+FG+DLAKR+IAK QAVVVEGYTDVMAMHLAGV TAVASCGTAFG +H+ +L Sbjct 241 IYKKSHVLFGLDLAKREIAKRRQAVVVEGYTDVMAMHLAGVPTAVASCGTAFGADHMNVL 300 Query 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 RRL++DDS GE+I+ FDGD AG+ AALKAF+GEQ+ + Q+++AVAPDGMDPC+LR + Sbjct 301 RRLLIDDS-VNGEVIFTFDGDAAGQKAALKAFEGEQQFSAQTYIAVAPDGMDPCELRQEK 359 Query 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 GD A+RDLVARRTPL EFAI+A + + DLDS +GR ALR+ VP V QIKD + RD YA Sbjct 360 GDVAVRDLVARRTPLVEFAIKAQLRDYDLDSVDGRAEALRKMVPFVAQIKDSSKRDGYAT 419 Query 421 QLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAV----- 475 +LA WVGW D A V+ RVR A T A+AA R P + A+ Sbjct 420 RLAWWVGWEDEASVVRRVRETA-------------TGTAKAAPRRRPVDPNQGALDVAVD 466 Query 476 ---RPDPRDPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTS 532 RP+PRDP LW QREALK+ALQ P + P +D+L E FT+P Y A+ A+ AGGT+ Sbjct 467 APPRPNPRDPALWHQREALKAALQVPEMVSPYYDSLPDEAFTNPLYLALHRALREAGGTA 526 Query 533 AGLSGAQWLDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQI 592 +GL+G +D V Q L++EL VE ++ D+ RY+ VLARLQ+V +G QI Sbjct 527 SGLTGPALVDAVGQACPVPSARPLLTELAVEPLRTKGDEY-RYVQSVLARLQQVLVGAQI 585 Query 593 AEVKSKLQRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQ 631 E+KS+L+R+SPIE+ DEY ALFGDL+A+E Y + L +Q Sbjct 586 TEIKSRLRRVSPIEEADEYRALFGDLIALEEYHKELGQQ 624 >gi|145296223|ref|YP_001139044.1| DNA primase [Corynebacterium glutamicum R] gi|140846143|dbj|BAF55142.1| hypothetical protein [Corynebacterium glutamicum R] Length=633 Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust. Identities = 367/634 (58%), Positives = 468/634 (74%), Gaps = 11/634 (1%) Query 2 SGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHFH 61 GRI + DI AIRE IE++VGDYVQL+ AGADSLKGL PF +EK+PSFHVRPN G++H Sbjct 5 KGRIPESDIQAIRERTPIEEIVGDYVQLKSAGADSLKGLSPFKDEKTPSFHVRPNRGYYH 64 Query 62 CFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAAN 121 CF G+GGDV++F+ ++EH+SF EAVE+ A++IG+ I+Y G + + G+R RL+ AN Sbjct 65 CFSTGKGGDVFSFLMEMEHISFPEAVEVCAEKIGYQINYQGGGPGRREEPGTRQRLILAN 124 Query 122 AAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEFE 181 AA FY + L++ EA P R++L +R F F CG+AP+GWD+LTKHL +KGFEF+ Sbjct 125 KAAHQFYREQLETPEAQPGREFLLQRGFGQQHIYHFECGYAPAGWDTLTKHLLKKGFEFK 184 Query 182 ELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETLL 241 ELEAAGLS+ G+ GP+D+F RRLLWPI+ +G+V+GFGAR+LFDDD M KY+NTPETLL Sbjct 185 ELEAAGLSKMGKRGPIDQFQRRLLWPIKNLSGDVIGFGARKLFDDDKM-GKYMNTPETLL 243 Query 242 YKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAMLR 301 YKKS V+FG+D AK+ IA GHQAVVVEGYTDVMAMH AG+ TAVASCGTAFG EHL MLR Sbjct 244 YKKSKVLFGLDSAKKAIAAGHQAVVVEGYTDVMAMHAAGIETAVASCGTAFGEEHLQMLR 303 Query 302 RLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKCG 361 RLM+DD++FRGELIY FDGDEAG+ AA++AF+G+QK GQSFV+VAP+GMDPCDLRL+ G Sbjct 304 RLMLDDNYFRGELIYTFDGDEAGQKAAMRAFEGDQKFTGQSFVSVAPNGMDPCDLRLERG 363 Query 362 DAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYARQ 421 DAA+RDLVARR P+FEF I++ I+E LD+ EGR+AALRR VP+V I+D TL+ EYAR Sbjct 364 DAAVRDLVARRIPMFEFVIQSIISEYTLDTVEGRLAALRRAVPIVADIRDKTLQSEYARL 423 Query 422 LAGWVGWADVAQVIGRVRGEA---KRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRPD 478 L+GWVGW+D ++V+ +V EA KR K P + + + RPT P+ Sbjct 424 LSGWVGWSDPSEVLRQVHEEARRPKRDKKPVRAKRFDQPLEDQSLRPTMA-------LPN 476 Query 479 PRDPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGA 538 PR+P LW +RE+LK ALQYP LAG FD L + FT+P Y VR AI AGG L G Sbjct 477 PRNPVLWQERESLKIALQYPELAGSYFDGLPTDSFTNPAYRMVRDAISAAGGCERALDGT 536 Query 539 QWLDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKSK 598 WL V + T + ++L+SEL +E I+V+ L Y GVL+RLQE +G QIA +K + Sbjct 537 DWLPAVSENMTDILGTSLVSELAMEPIEVEAQDLESYTDGVLSRLQETRVGNQIAILKGQ 596 Query 599 LQRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQA 632 LQRM P E Y++LF DLVA+E RR LL +A Sbjct 597 LQRMRPSEDEQAYNSLFSDLVALEQARRELLARA 630 >gi|19553466|ref|NP_601468.1| DNA primase [Corynebacterium glutamicum ATCC 13032] gi|62391109|ref|YP_226511.1| DNA primase [Corynebacterium glutamicum ATCC 13032] gi|21325039|dbj|BAB99661.1| DNA primase (bacterial type) [Corynebacterium glutamicum ATCC 13032] gi|41326448|emb|CAF20610.1| DNA PRIMASE [Corynebacterium glutamicum ATCC 13032] gi|344044342|gb|EGV40020.1| DNA primase [Corynebacterium glutamicum S9114] Length=633 Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust. Identities = 367/634 (58%), Positives = 468/634 (74%), Gaps = 11/634 (1%) Query 2 SGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHFH 61 GRI + DI AIRE IE++VGDYVQL+ AGADSLKGL PF +EK+PSFHVRPN G++H Sbjct 5 KGRIPESDIQAIRERTPIEEIVGDYVQLKSAGADSLKGLSPFKDEKTPSFHVRPNRGYYH 64 Query 62 CFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAAN 121 CF G+GGDV++F+ ++EH+SF EAVE+ A++IG+ I+Y G + + G+R RL+ AN Sbjct 65 CFSTGKGGDVFSFLMEMEHISFPEAVEVCAEKIGYQINYQGGGPGRREEPGTRQRLILAN 124 Query 122 AAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEFE 181 AA FY + L++ EA P R++L +R F F CG+AP+GWD+LTKHL +KGFEF+ Sbjct 125 KAAHQFYREQLETPEAQPGREFLLQRGFGQQHIYHFECGYAPAGWDTLTKHLLKKGFEFK 184 Query 182 ELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETLL 241 ELEAAGLS+ G+ GP+D+F RRLLWPI+ +G+V+GFGAR+LFDDD M KY+NTPETLL Sbjct 185 ELEAAGLSKMGKRGPIDQFQRRLLWPIKNLSGDVIGFGARKLFDDDKM-GKYMNTPETLL 243 Query 242 YKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAMLR 301 YKKS V+FG+D AK+ IA GHQAVVVEGYTDVMAMH AG+ TAVASCGTAFG EHL MLR Sbjct 244 YKKSKVLFGLDSAKKAIAAGHQAVVVEGYTDVMAMHAAGIDTAVASCGTAFGEEHLQMLR 303 Query 302 RLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKCG 361 RLM+DD++FRGELIY FDGDEAG+ AA++AF+G+QK GQSFV+VAP+GMDPCDLRL+ G Sbjct 304 RLMLDDNYFRGELIYTFDGDEAGQKAAMRAFEGDQKFTGQSFVSVAPNGMDPCDLRLERG 363 Query 362 DAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYARQ 421 DAA+RDLVARR P+FEF I++ I+E LD+ EGR+AALRR VP+V I+D TL+ EYAR Sbjct 364 DAAVRDLVARRIPMFEFVIQSIISEYTLDTVEGRLAALRRAVPIVADIRDKTLQSEYARL 423 Query 422 LAGWVGWADVAQVIGRVRGEA---KRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRPD 478 L+GWVGW+D ++V+ +V EA KR K P + + + RPT P+ Sbjct 424 LSGWVGWSDPSEVLRQVHEEARRPKRDKKPVRAKRFDQPLEDQSLRPTMA-------LPN 476 Query 479 PRDPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGA 538 PR+P LW +RE+LK ALQYP LAG FD L + FT+P Y VR AI AGG L G Sbjct 477 PRNPVLWQERESLKIALQYPELAGSYFDGLPTDSFTNPAYRMVRDAISAAGGCERALDGT 536 Query 539 QWLDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKSK 598 WL V + T + ++L+SEL +E I+V+ L Y GVL+RLQE +G QIA +K + Sbjct 537 DWLPAVSENMTDILGTSLVSELAMEPIEVEAQDLESYTDGVLSRLQETRVGNQIAILKGQ 596 Query 599 LQRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQA 632 LQRM P E Y++LF DLVA+E RR LL +A Sbjct 597 LQRMRPSEDEQAYNSLFSDLVALEQARRELLARA 630 >gi|25028725|ref|NP_738779.1| DNA primase [Corynebacterium efficiens YS-314] gi|259507786|ref|ZP_05750686.1| DNA primase [Corynebacterium efficiens YS-314] gi|23494011|dbj|BAC18979.1| putative DNA primase DnaG [Corynebacterium efficiens YS-314] gi|259164579|gb|EEW49133.1| DNA primase [Corynebacterium efficiens YS-314] Length=645 Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust. Identities = 368/635 (58%), Positives = 463/635 (73%), Gaps = 12/635 (1%) Query 2 SGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHFH 61 GRI + DI AIRE IE++VGDYVQL+ AGADSLKGL PF +EK+PSFHVRPN G++H Sbjct 16 KGRIPESDIQAIRERTPIEEIVGDYVQLKSAGADSLKGLSPFKDEKTPSFHVRPNRGYYH 75 Query 62 CFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAAN 121 CF G+GGDVY+F+ ++EH+SF EAVE+ A++IG+ I+Y G + + G+R RL+AAN Sbjct 76 CFSTGKGGDVYSFLMEMEHISFPEAVEVCAEKIGYQINYQGGGPGRREEPGTRQRLIAAN 135 Query 122 AAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEFE 181 AA FY + L++ EA P R +L +R F F CG+AP+GWD+LTKHL +KGFEF Sbjct 136 KAAHQFYREQLETPEAQPGRDFLLQRGFSKEHIYHFECGYAPAGWDTLTKHLLKKGFEFR 195 Query 182 ELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETLL 241 ELEAAGLS+ GR GP+D+F RRLLWPI+ AG+V+GFGAR+LFDDD M KY+NTPETLL Sbjct 196 ELEAAGLSKMGRRGPIDQFQRRLLWPIKNLAGDVIGFGARKLFDDDKM-GKYMNTPETLL 254 Query 242 YKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAMLR 301 YKKS V+FG+D AKR IA+ HQAVVVEGYTDVMAMH AG+ TAVASCGTAFG EHL MLR Sbjct 255 YKKSKVLFGLDTAKRAIAQSHQAVVVEGYTDVMAMHAAGINTAVASCGTAFGDEHLQMLR 314 Query 302 RLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKCG 361 RLM+DD++FRGELIY FDGDEAG+ AA++AF+G+QK GQS+VAVAP GMDPCDLRL+ G Sbjct 315 RLMLDDNYFRGELIYTFDGDEAGQKAAMRAFEGDQKFTGQSYVAVAPQGMDPCDLRLERG 374 Query 362 DAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYARQ 421 DAA+RDLVA R P+FEF I++ I+E LD+ EGR+ ALRR VP+V I+D TL+ EYAR Sbjct 375 DAAVRDLVASRVPMFEFVIQSIISEYPLDTVEGRLNALRRAVPIVAGIRDRTLQSEYARL 434 Query 422 LAGWVGWADVAQVIGRVRGEAKRTK----HPRLGRLGSTTIARAAQRPTAGPPTELAVRP 477 LAGWVGW D A+V+ +V E +R K R R + + + RP V P Sbjct 435 LAGWVGWPDPAEVLQQVHEEVRRPKPQKRQMRATRFDAQNLEDQSSRPQ-------MVMP 487 Query 478 DPRDPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSG 537 DPR+P LW +RE+LK ALQ+P LAG FD L V+ FT+P Y VR AI AGG G Sbjct 488 DPRNPALWQERESLKIALQHPELAGSYFDGLAVDCFTNPAYRMVRDAITAAGGCEQATGG 547 Query 538 AQWLDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKS 597 WL V + + ++L+SEL +E I+V+ L Y GVL+RLQE +G QIA +KS Sbjct 548 VDWLPRVSENMADILGTSLVSELAMEPIEVEAQDLESYTDGVLSRLQETRVGNQIAVLKS 607 Query 598 KLQRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQA 632 +LQRM P + Y++LF DLVA+E RR L+ +A Sbjct 608 QLQRMRPSDDEQAYNSLFADLVALEQARRELMARA 642 >gi|134098092|ref|YP_001103753.1| DNA primase [Saccharopolyspora erythraea NRRL 2338] gi|291007449|ref|ZP_06565422.1| DNA primase [Saccharopolyspora erythraea NRRL 2338] gi|133910715|emb|CAM00828.1| DNA primase (bacterial type) [Saccharopolyspora erythraea NRRL 2338] Length=630 Score = 751 bits (1938), Expect = 0.0, Method: Compositional matrix adjust. Identities = 374/638 (59%), Positives = 469/638 (74%), Gaps = 20/638 (3%) Query 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 M+GRI + DIA +RE RI+DVVG+YV LR AG +LKGLCPFH+EK+PSF+VRP HG F Sbjct 1 MAGRIRESDIAEVRERNRIDDVVGEYVALRNAGGGALKGLCPFHDEKTPSFNVRPGHGTF 60 Query 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA 120 HCFGCGEGGDV AF+ K EH+ FVE+VE LADR+G + Y G +RDRG+R+R++ A Sbjct 61 HCFGCGEGGDVIAFLMKSEHLGFVESVERLADRVGIQLQYEGGVAPSKRDRGTRTRMVEA 120 Query 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 + AA FYA+ L+S EA PAR+YL R FD AAA KFGCGFAP GWD LTK L KGFE Sbjct 121 HRIAAEFYAEQLRSPEAQPAREYLARRGFDEAAATKFGCGFAPGGWDKLTKLLLGKGFEL 180 Query 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 +EL GL+++GR GP+DRFHRRLLWP++ G+VVGFGARR+FDDD +EAKYVNT T Sbjct 181 DELYKCGLAKEGRRGPIDRFHRRLLWPLKDLGGDVVGFGARRIFDDDPIEAKYVNTSATP 240 Query 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 L+ KS V+FGIDLAKR+IAK QAVVVEGYTDVMAMHLAGV TA+ASCGTAFG EH+++L Sbjct 241 LFNKSQVLFGIDLAKREIAKRRQAVVVEGYTDVMAMHLAGVPTAIASCGTAFGDEHISVL 300 Query 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 RRLMMD+ F GE+I+ FDGDEAG+ AALKAF+G+Q+ +++A+ PDGMDPC+LR Sbjct 301 RRLMMDNDRFSGEVIFTFDGDEAGQKAALKAFEGDQQFTTHTYIAITPDGMDPCELREAR 360 Query 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 GD A++D+VARR LFEFAIR+ + DLDS +GRVAAL+ VP+V +IKD RD +A Sbjct 361 GDTAVKDVVARRRELFEFAIRSKLKGFDLDSVDGRVAALQETVPLVARIKDVERRDGFAA 420 Query 421 QLAGWVGWADVAQVIGRVRGEA------KRTKHPRLGRLGSTTIARAAQRPTAGPPTELA 474 +LA W GW D QV+ RVR A R + PR Q P G +L Sbjct 421 KLAWWAGWTDENQVVRRVREAAGTAPAKPRRRAPR------------GQEPL-GIEVDLP 467 Query 475 VRPDPRDPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAG 534 RP DP W +RE LK+ALQ PALAGP++D+L E FT P YA + A+ AGGTS+G Sbjct 468 KRPPRHDPR-WLERETLKAALQVPALAGPLYDSLPEEAFTEPAYAELHRAVLAAGGTSSG 526 Query 535 LSGAQWLDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAE 594 L+G +D V + S+VT +L++EL VE ++ PRY+ GV+ARLQE + RQIA+ Sbjct 527 LAGVALVDAVGRHCESSVTRSLLTELAVETPDTKSEEDPRYVGGVIARLQECLVSRQIAD 586 Query 595 VKSKLQRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQA 632 +KS++QRMSP+E DEY+ALFGDLVA+E YR+SLL+QA Sbjct 587 IKSRVQRMSPLEDPDEYNALFGDLVALEGYRKSLLDQA 624 >gi|38234270|ref|NP_940037.1| DNA primase [Corynebacterium diphtheriae NCTC 13129] gi|38200533|emb|CAE50228.1| DNA primase [Corynebacterium diphtheriae] Length=632 Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/632 (59%), Positives = 463/632 (74%), Gaps = 8/632 (1%) Query 2 SGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHFH 61 GRI D DI AIRE IE++VG+YVQL+ AGADSLKGL PF EK+PSFHVRPNHG+FH Sbjct 4 KGRIPDSDIQAIRERTPIEEIVGEYVQLKPAGADSLKGLSPFKEEKTPSFHVRPNHGYFH 63 Query 62 CFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDR-GSRSRLLAA 120 CF G+GGDV++F+ ++E ++F EAVE+ A++IG+ I+Y G T +R+ G+R RL+ A Sbjct 64 CFSTGKGGDVFSFLMEMEQLTFPEAVEVCAEKIGYQINYQGGTTGARREEPGTRKRLIEA 123 Query 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 N A FY Q L++ EAA ARQ+L +R F F CG+AP GWD++TK + RKGFEF Sbjct 124 NRVAHQFYRQQLETPEAAVARQFLLDRGFSQQHIYGFECGYAPEGWDTMTKFMLRKGFEF 183 Query 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 +ELEAAGLS GR GP+DRFHRRLLWPI++ +G+V+GFGAR+LFDDD + KY+NTPETL Sbjct 184 KELEAAGLSTMGRRGPIDRFHRRLLWPIKSVSGDVIGFGARKLFDDDKL-GKYMNTPETL 242 Query 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 LYKKS V+FG+DLAK+ IA HQAVVVEGYTDVMAMH AG+TTAVA+CGTAFG EHL +L Sbjct 243 LYKKSKVLFGLDLAKKSIASQHQAVVVEGYTDVMAMHAAGITTAVAACGTAFGEEHLQIL 302 Query 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 RR M+DD++F G LIY FDGDEAG+ AA++AF+G+QK +GQS+VAVAPDGMDPCDLRL Sbjct 303 RRYMLDDAYFAGSLIYTFDGDEAGQKAAMRAFEGDQKFSGQSYVAVAPDGMDPCDLRLAK 362 Query 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 GDAA+RDLVA+R P+FEF IR I+E LDS EGR+ ALRR VP+V I+D L+ EYAR Sbjct 363 GDAAVRDLVAQRVPMFEFIIRTLISEYPLDSVEGRLQALRRAVPIVASIRDRALKTEYAR 422 Query 421 QLAGWVGWADVAQVIGRVRGEAKRTK-HPRLGRLGSTTIARAAQRPTAGPPTELAVRPDP 479 LAGWVGW D +V+ +VR E +R K PR R +T I +Q + V PD Sbjct 423 LLAGWVGWPDPNEVLQQVRAEERRPKTQPRQRR--ATRIDSNSQPAMI---QSMLVMPDR 477 Query 480 RDPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQ 539 ++P LWPQREALK ALQYP AG FD+L + FTH YAAVR AI AGG S + G+ Sbjct 478 KEPRLWPQREALKIALQYPEHAGEYFDSLPDDAFTHESYAAVRKAIVAAGGCSDAIRGST 537 Query 540 WLDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKSKL 599 WLD VR V +L+SEL VE I +D+ L + LARL E +G QIA++K + Sbjct 538 WLDAVRDNVYDMVGKSLVSELAVEHIILDEWGLAAHTDTTLARLMEQRIGNQIAQLKGAM 597 Query 600 QRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQ 631 QRM P E Y++LF DLVA+E RR LLE+ Sbjct 598 QRMRPSEDMQAYNSLFADLVALEQTRRELLEK 629 >gi|213965824|ref|ZP_03394016.1| DNA primase [Corynebacterium amycolatum SK46] gi|213951583|gb|EEB62973.1| DNA primase [Corynebacterium amycolatum SK46] Length=652 Score = 746 bits (1926), Expect = 0.0, Method: Compositional matrix adjust. Identities = 368/638 (58%), Positives = 458/638 (72%), Gaps = 12/638 (1%) Query 3 GRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHFHC 62 GRI D DIAAIRE IE++V +YV L+ AGADSLKGL PF +E++PSFHVRPNHG++HC Sbjct 13 GRIPDSDIAAIRERTPIEEIVAEYVNLKPAGADSLKGLSPFKDERTPSFHVRPNHGYYHC 72 Query 63 FGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAANA 122 F G+GGDV++F+ ++EH+SF EAVE A++IG I+Y G T + + G+R RL+AAN Sbjct 73 FSTGKGGDVFSFLMEMEHLSFPEAVEACAEKIGFHINYEGGGTGRREEPGTRQRLIAANR 132 Query 123 AAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEFEE 182 A FY + + AAPAR++L R F A A +FGCG++P+GWD+LTKHLQR GF FEE Sbjct 133 EAQKFYREQFSTPAAAPAREFLENRGFTAEHAAQFGCGYSPAGWDTLTKHLQRLGFSFEE 192 Query 183 LEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETLLY 242 L+ AGLS+ GR GP+DRFHRRL+WPIR +G+V+GFGAR+LFDDD + KY+NTPET+LY Sbjct 193 LDKAGLSKMGRMGPIDRFHRRLMWPIRNMSGDVIGFGARKLFDDDNL-GKYMNTPETMLY 251 Query 243 KKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAMLRR 302 KKS V+FG+DLAK+DIA GHQAV+VEGYTDVMAMH +GVTTAVASCGTAFG EHL +LRR Sbjct 252 KKSKVLFGLDLAKKDIAAGHQAVIVEGYTDVMAMHASGVTTAVASCGTAFGEEHLQLLRR 311 Query 303 LMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKCGD 362 LM+DD+FFRGELIY FDGDEAG+ AA++AF+GEQ GQS+VAVAPDGMDPCDLR K G+ Sbjct 312 LMLDDNFFRGELIYTFDGDEAGQKAAMRAFEGEQNFTGQSYVAVAPDGMDPCDLRQKKGE 371 Query 363 AALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYARQL 422 AA+RDLVA R PL EF +R +A+ DL +A GRV+ LRR VP++ Q+KD LRDEYAR++ Sbjct 372 AAVRDLVASRRPLIEFVLRTLLADYDLTTANGRVSGLRRVVPVLAQLKDAALRDEYAREV 431 Query 423 AGWVGWADVAQVIGRVRGEA------KRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVR 476 AGW+GW D A+++ RVR EA KRT + R R P Sbjct 432 AGWIGWNDEAELVQRVREEASRPQNEKRTPYQRRQEEARAREEAEEARRRRNPALPY--- 488 Query 477 PDPRDPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAI--DTAGGTSAG 534 P+PRDP L+ QREALK A+Q PA GPVFDAL E F HP Y AV AI A Sbjct 489 PNPRDPVLYAQREALKLAIQEPATTGPVFDALAPETFGHPTYRAVFDAIMAAGGACGEAA 548 Query 535 LSGAQWLDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAE 594 W + Q V L++ELGVE I VD + L Y +LARLQEVW+G QIA+ Sbjct 549 TQPHSWATAIMDQAREDVVKHLVTELGVEQIAVDTETLRPYAQAILARLQEVWVGDQIAQ 608 Query 595 VKSKLQRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQA 632 +K+ L RM P + Y++LF DL+AME YRR L +A Sbjct 609 LKAMLSRMRPSDDETAYNSLFADLLAMEQYRRELQAEA 646 >gi|257055422|ref|YP_003133254.1| DNA primase [Saccharomonospora viridis DSM 43017] gi|256585294|gb|ACU96427.1| DNA primase [Saccharomonospora viridis DSM 43017] Length=657 Score = 743 bits (1917), Expect = 0.0, Method: Compositional matrix adjust. Identities = 377/634 (60%), Positives = 471/634 (75%), Gaps = 0/634 (0%) Query 1 MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHF 60 ++GRI + DIA +RE RI+++VG+YV LRRAG +LKGLCPFH EK+PSF+VRP HG F Sbjct 21 VAGRIRESDIAQVRERNRIDEIVGEYVALRRAGGGALKGLCPFHEEKTPSFNVRPTHGTF 80 Query 61 HCFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDRGSRSRLLAA 120 HCFGCGEGGDV F+ +IEH+ FVEAVE LADRIG ++Y G +SV+RDRG+R RL+ A Sbjct 81 HCFGCGEGGDVIKFVMQIEHLGFVEAVERLADRIGLQLTYEGGGSSVRRDRGTRLRLVEA 140 Query 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 + AA AFYA+ L + EA AR +LTER FD + KFGCG+AP+GWD LTKHL R GFE Sbjct 141 HKAAQAFYAEQLTTPEAEAARAFLTERGFDQSTWTKFGCGYAPAGWDRLTKHLLRSGFEL 200 Query 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 EL A LS++GR GP+DRFHRRL+WPI+ G+VVGFGARRLFDDD ++AKY+NT E+ Sbjct 201 SELYRAQLSKEGRRGPIDRFHRRLVWPIKDRGGDVVGFGARRLFDDDPIQAKYLNTSESP 260 Query 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 +YKKS V+FG+D AKR+IA+ HQ VVVEGYTDVMAMH AGV TAVA+ GTAFG +H+ +L Sbjct 261 IYKKSQVLFGLDQAKREIARRHQVVVVEGYTDVMAMHAAGVPTAVATSGTAFGEDHMRVL 320 Query 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 R+LMMDD FRGE+I+ FDGDEAG+ AALKAF+G+Q AGQ+++A+APDGMDPC+LRL Sbjct 321 RQLMMDDDAFRGEVIFTFDGDEAGQKAALKAFEGDQTFAGQTYIAIAPDGMDPCELRLAK 380 Query 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 GDAA+RDLVARR PLFEFAI++ +A DLDS +G+VAAL+R VP+V QIKD RD YA Sbjct 381 GDAAVRDLVARRIPLFEFAIKSLLASYDLDSVDGQVAALQRTVPLVAQIKDRAKRDGYAT 440 Query 421 QLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRPDPR 480 +LA WVGW D A V+ RVR A G S+ A A RPDPR Sbjct 441 KLAWWVGWQDEAMVVRRVRETADGAPARTNGTRRSSARAGRAGGARGNGTGGQLERPDPR 500 Query 481 DPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQW 540 +P L QRE LK+ALQ PALAGP +DAL + FTHP Y V A+ AGGT +GLSG+ Sbjct 501 NPDLRAQREVLKAALQEPALAGPEYDALPEDAFTHPAYVGVHRALLAAGGTGSGLSGSAL 560 Query 541 LDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAEVKSKLQ 600 ++ + +L+SEL VE +Q DD RY++ VLA +QE +GRQI E+KS+LQ Sbjct 561 IEAASAHASDRTVVSLLSELAVEPLQAKDDADVRYVSSVLAAVQENLVGRQIGELKSRLQ 620 Query 601 RMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASG 634 R+SP++ +EY ALFGDLVA+E YR++L EQA G Sbjct 621 RLSPVDAAEEYRALFGDLVALEQYRKALREQAMG 654 >gi|302331180|gb|ADL21374.1| DNA primase [Corynebacterium pseudotuberculosis 1002] gi|308276874|gb|ADO26773.1| DNA primase [Corynebacterium pseudotuberculosis I19] gi|341825317|gb|AEK92838.1| DNA primase [Corynebacterium pseudotuberculosis PAT10] Length=640 Score = 731 bits (1887), Expect = 0.0, Method: Compositional matrix adjust. Identities = 366/637 (58%), Positives = 462/637 (73%), Gaps = 11/637 (1%) Query 2 SGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHFH 61 GRI D DI AIRE IE++VG+YVQL+ AGADSLKGL PF EK+PSFHVRPNHG+FH Sbjct 5 KGRIPDSDIQAIRERTPIEEIVGEYVQLKPAGADSLKGLSPFKEEKTPSFHVRPNHGYFH 64 Query 62 CFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDR-GSRSRLLAA 120 CF G+GGDV++F+ ++EH++F EAVE A++I + I+Y G T +R+ G+R RL+ A Sbjct 65 CFSTGKGGDVFSFLMEMEHLTFPEAVEACAEKIHYQINYQGGTTGARREEPGTRRRLIEA 124 Query 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 N A AFY + L++ EAA ARQ+L +R F F CG+AP GWD LTK+L RKGF+F Sbjct 125 NKTAHAFYREQLETPEAATARQFLLDRGFSQQHIYAFECGYAPEGWDVLTKYLLRKGFDF 184 Query 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 +ELEAAGLS GR GP+DRFHRRLLWPI++ +G+V+GFGAR+LFDDD + KY+NTPETL Sbjct 185 KELEAAGLSTMGRRGPIDRFHRRLLWPIKSVSGDVIGFGARKLFDDDKL-GKYMNTPETL 243 Query 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 LYKKS V+FG+D AK+DIA+ HQAVVVEGYTDVMAMH AG+TTAVA+CGTAFG EHL +L Sbjct 244 LYKKSKVLFGLDNAKKDIAQNHQAVVVEGYTDVMAMHAAGITTAVAACGTAFGEEHLQIL 303 Query 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 RR M+DDS+F G LIY FDGDEAG+ AA++AF+G+QK GQS+VAVAP+GMDPCDLRL Sbjct 304 RRYMLDDSYFSGSLIYTFDGDEAGQKAAMRAFEGDQKFTGQSYVAVAPEGMDPCDLRLSK 363 Query 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 GDAA+RDLVA+R P+FEF IR IA LDS EGR+ ALRR VP+V IKD L+ EYAR Sbjct 364 GDAAVRDLVAQRVPMFEFIIRTLIAGYSLDSVEGRLQALRRAVPIVADIKDRALKTEYAR 423 Query 421 QLAGWVGWADVAQVIGRVRGEAKRTKH-PRLGRLGSTTIARAAQRPTAGPPTELAVRPDP 479 L+GWVGW D +VI +VR +R ++ P+ R T A + G T L V PD Sbjct 424 LLSGWVGWPDPNEVIQQVRVAERRPRNAPKAKR---ATRFDANSNSSEGIATALMVLPDR 480 Query 480 RDPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQ 539 +DP LWPQREALK ALQYP +AG FD L + F++ YAA+ AI AGG + GA Sbjct 481 KDPRLWPQREALKLALQYPHVAGRYFDDLPDDAFSNETYAALNVAIAQAGGCANADGGAA 540 Query 540 WLDMVRQQTTSTVTSALISELGVEAIQVD-----DDKLPRYIAGVLARLQEVWLGRQIAE 594 WL V V +L+SEL VE + ++ ++ L ++I L+RLQE +G QIA Sbjct 541 WLAAVSDCVHDLVGKSLVSELAVEPVHIETEDEVENGLLKHIDKTLSRLQEQRVGNQIAL 600 Query 595 VKSKLQRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQ 631 +K KLQRM P + Y+++F DLVA+E RR LL++ Sbjct 601 LKGKLQRMRPSDDEVAYNSMFADLVALEQSRRELLKR 637 >gi|300858931|ref|YP_003783914.1| DNA primase [Corynebacterium pseudotuberculosis FRC41] gi|300686385|gb|ADK29307.1| DNA primase [Corynebacterium pseudotuberculosis FRC41] gi|302206631|gb|ADL10973.1| DNA primase [Corynebacterium pseudotuberculosis C231] Length=638 Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust. Identities = 366/637 (58%), Positives = 462/637 (73%), Gaps = 11/637 (1%) Query 2 SGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHFH 61 GRI D DI AIRE IE++VG+YVQL+ AGADSLKGL PF EK+PSFHVRPNHG+FH Sbjct 3 KGRIPDSDIQAIRERTPIEEIVGEYVQLKPAGADSLKGLSPFKEEKTPSFHVRPNHGYFH 62 Query 62 CFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDR-GSRSRLLAA 120 CF G+GGDV++F+ ++EH++F EAVE A++I + I+Y G T +R+ G+R RL+ A Sbjct 63 CFSTGKGGDVFSFLMEMEHLTFPEAVEACAEKIHYQINYQGGTTGARREEPGTRRRLIEA 122 Query 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 N A AFY + L++ EAA ARQ+L +R F F CG+AP GWD LTK+L RKGF+F Sbjct 123 NKTAHAFYREQLETPEAATARQFLLDRGFSQQHIYAFECGYAPEGWDVLTKYLLRKGFDF 182 Query 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 +ELEAAGLS GR GP+DRFHRRLLWPI++ +G+V+GFGAR+LFDDD + KY+NTPETL Sbjct 183 KELEAAGLSTMGRRGPIDRFHRRLLWPIKSVSGDVIGFGARKLFDDDKL-GKYMNTPETL 241 Query 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 LYKKS V+FG+D AK+DIA+ HQAVVVEGYTDVMAMH AG+TTAVA+CGTAFG EHL +L Sbjct 242 LYKKSKVLFGLDNAKKDIAQNHQAVVVEGYTDVMAMHAAGITTAVAACGTAFGEEHLQIL 301 Query 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 RR M+DDS+F G LIY FDGDEAG+ AA++AF+G+QK GQS+VAVAP+GMDPCDLRL Sbjct 302 RRYMLDDSYFSGSLIYTFDGDEAGQKAAMRAFEGDQKFTGQSYVAVAPEGMDPCDLRLSK 361 Query 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 GDAA+RDLVA+R P+FEF IR IA LDS EGR+ ALRR VP+V IKD L+ EYAR Sbjct 362 GDAAVRDLVAQRVPMFEFIIRTLIAGYSLDSVEGRLQALRRAVPIVADIKDRALKTEYAR 421 Query 421 QLAGWVGWADVAQVIGRVRGEAKRTKH-PRLGRLGSTTIARAAQRPTAGPPTELAVRPDP 479 L+GWVGW D +VI +VR +R ++ P+ R T A + G T L V PD Sbjct 422 LLSGWVGWPDPNEVIQQVRVAERRPRNAPKAKR---ATRFDANSNSSEGIATALMVLPDR 478 Query 480 RDPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQ 539 +DP LWPQREALK ALQYP +AG FD L + F++ YAA+ AI AGG + GA Sbjct 479 KDPRLWPQREALKLALQYPHVAGRYFDDLPDDAFSNETYAALNVAIAQAGGCANADGGAA 538 Query 540 WLDMVRQQTTSTVTSALISELGVEAIQVD-----DDKLPRYIAGVLARLQEVWLGRQIAE 594 WL V V +L+SEL VE + ++ ++ L ++I L+RLQE +G QIA Sbjct 539 WLAAVSDCVHDLVGKSLVSELAVEPVHIETEDEVENGLLKHIDKTLSRLQEQRVGNQIAL 598 Query 595 VKSKLQRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQ 631 +K KLQRM P + Y+++F DLVA+E RR LL++ Sbjct 599 LKGKLQRMRPSDDEVAYNSMFADLVALEQSRRELLKR 635 >gi|337291216|ref|YP_004630237.1| DNA primase [Corynebacterium ulcerans BR-AD22] gi|334699522|gb|AEG84318.1| DNA primase [Corynebacterium ulcerans BR-AD22] Length=638 Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/637 (58%), Positives = 463/637 (73%), Gaps = 11/637 (1%) Query 2 SGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHFH 61 GRI D DI AIRE IE++VG+YVQL+ AGADSLKGL PF EK+PSFHVRPNHG+FH Sbjct 3 KGRIPDSDIQAIRERTPIEEIVGEYVQLKPAGADSLKGLSPFKEEKTPSFHVRPNHGYFH 62 Query 62 CFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDR-GSRSRLLAA 120 CF G+GGDV++F+ ++EH++F EAVE A++I + I+Y G T +R+ G+R RL+ A Sbjct 63 CFSTGKGGDVFSFLMEMEHLTFPEAVEACAEKIHYQINYQGGTTGARREEPGTRRRLIEA 122 Query 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 N AA AFY + L++ EAA ARQ+L +R F F CG+AP GWD LTKHL RKGF+F Sbjct 123 NKAAHAFYREQLETPEAATARQFLLDRGFSQQHIYAFECGYAPDGWDILTKHLLRKGFDF 182 Query 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 +ELEAAGLS GR GP+DRFHRRLLWPI++ +G+V+GFGAR+LFDDD + KY+NTPETL Sbjct 183 KELEAAGLSTMGRRGPIDRFHRRLLWPIKSVSGDVIGFGARKLFDDDKL-GKYMNTPETL 241 Query 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 LYKKS V+FG+D AK+DIA+ HQAVVVEGYTDVMAMH AG+TTAVA+CGTAFG EHL +L Sbjct 242 LYKKSKVLFGLDNAKKDIAQNHQAVVVEGYTDVMAMHAAGITTAVAACGTAFGEEHLQIL 301 Query 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 RR M+DDS+F G LIY FDGDEAG+ AA++AF+G+QK GQS+VAVAPDGMDPCDLRL+ Sbjct 302 RRYMLDDSYFAGSLIYTFDGDEAGQKAAMRAFEGDQKFTGQSYVAVAPDGMDPCDLRLRK 361 Query 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 GDAA+RDLVA+R P+FEF IR IA LDS EGR+ ALRR VP+V IKD L+ EYAR Sbjct 362 GDAAVRDLVAQRVPMFEFIIRTLIAGYSLDSVEGRLQALRRAVPIVADIKDQALKTEYAR 421 Query 421 QLAGWVGWADVAQVIGRVRGEAKRTKH-PRLGRLGSTTIARAAQRPTAGPPTELAVRPDP 479 L+GWVGW D +VI +VR +R ++ P+ R T A P AG T L V PD Sbjct 422 LLSGWVGWPDPNEVIQQVRVAERRPRNAPKPKR---ATRFDANNDPAAGVATTLMVLPDR 478 Query 480 RDPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQ 539 +DP LWPQREALK ALQYP +AG FD L + F++ YAA+ +AI AGG + G Sbjct 479 KDPRLWPQREALKLALQYPQVAGQHFDDLPDDAFSNEAYAALNSAIAQAGGCAHTDEGPA 538 Query 540 WLDMVRQQTTSTVTSALISELG-----VEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAE 594 WL V V +L+SEL VE + ++ L ++I L+RLQE +G QIA Sbjct 539 WLAAVSDSVHDLVGKSLVSELAVEPVHVETEEEVENGLLKHIDKTLSRLQEQRVGNQIAL 598 Query 595 VKSKLQRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQ 631 +K KLQRM P + Y+++F +LVA+E RR LL++ Sbjct 599 LKGKLQRMRPSDDEVMYNSMFAELVALEQSRRELLKR 635 >gi|334697326|gb|AEG82123.1| DNA primase [Corynebacterium ulcerans 809] Length=638 Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/637 (58%), Positives = 464/637 (73%), Gaps = 11/637 (1%) Query 2 SGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHFH 61 GRI D DI AIRE IE++VG+YVQL+ AGADSLKGL PF EK+PSFHVRPNHG+FH Sbjct 3 KGRIPDSDIQAIRERTPIEEIVGEYVQLKPAGADSLKGLSPFKEEKTPSFHVRPNHGYFH 62 Query 62 CFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDR-GSRSRLLAA 120 CF G+GGDV++F+ ++EH++F EAVE A++I + I+Y G T +R+ G+R RL+ A Sbjct 63 CFSTGKGGDVFSFLMEMEHLTFPEAVEACAEKIHYQINYQGGTTGARREEPGTRRRLIEA 122 Query 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 N AA AFY + L++ EAA ARQ+L +R F F CG+AP GWD LTKHL RKGF+F Sbjct 123 NKAAHAFYREQLETPEAATARQFLLDRGFSQQHIYAFECGYAPDGWDILTKHLLRKGFDF 182 Query 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 +ELEAAGLS GR GP+DRFHRRLLWPI++ +G+V+GFGAR+LFDDD + KY+NTPETL Sbjct 183 KELEAAGLSTMGRRGPIDRFHRRLLWPIKSVSGDVIGFGARKLFDDDKL-GKYMNTPETL 241 Query 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 LYKKS V+FG+D AK+DIA+ HQAVVVEGYTDVMAMH AG+TTAVA+CGTAFG EHL +L Sbjct 242 LYKKSKVLFGLDNAKKDIAQNHQAVVVEGYTDVMAMHAAGITTAVAACGTAFGEEHLQIL 301 Query 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 RR M+DDS+F G LIY FDGDEAG+ AA++AF+G+QK GQS+VAVAPDGMDPCDLRL+ Sbjct 302 RRYMLDDSYFAGSLIYTFDGDEAGQKAAMRAFEGDQKFTGQSYVAVAPDGMDPCDLRLRK 361 Query 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 GDAA+RDLVA+R P+FEF IR IA LDS EGR+ ALRR VP+V IKD L+ EYAR Sbjct 362 GDAAVRDLVAQRVPMFEFIIRTLIAGYSLDSVEGRLQALRRAVPIVADIKDQALKTEYAR 421 Query 421 QLAGWVGWADVAQVIGRVRGEAKRTKH-PRLGRLGSTTIARAAQRPTAGPPTELAVRPDP 479 L+GWVGW D +VI +VR +R ++ P+ R T A P AG T L V PD Sbjct 422 LLSGWVGWPDPNEVIQQVRVAERRPRNAPKPKR---ATRFDANNDPAAGVATTLMVLPDR 478 Query 480 RDPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLSGAQ 539 +DP LWPQREALK ALQYP +AG FD L + F++ YAA+ +AI AGG + G Sbjct 479 KDPRLWPQREALKLALQYPQVAGQHFDDLPDDAFSNEAYAALNSAIAQAGGCAHTDEGPA 538 Query 540 WLDMVRQQTTSTVTSALISELG-----VEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAE 594 WL V + V +L+SEL VE + ++ L ++I L+RLQE +G QIA Sbjct 539 WLAAVSDRVHDLVGKSLVSELAVEPVHVETEEEVENGLLKHIDKTLSRLQEQRVGNQIAL 598 Query 595 VKSKLQRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQ 631 +K KLQRM P + Y+++F +LVA+E RR LL++ Sbjct 599 LKGKLQRMRPSDDEVMYNSMFAELVALEQSRRELLKR 635 >gi|227833615|ref|YP_002835322.1| DNA primase [Corynebacterium aurimucosum ATCC 700975] gi|262184617|ref|ZP_06044038.1| DNA primase [Corynebacterium aurimucosum ATCC 700975] gi|227454631|gb|ACP33384.1| DNA primase [Corynebacterium aurimucosum ATCC 700975] Length=642 Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/638 (56%), Positives = 466/638 (74%), Gaps = 12/638 (1%) Query 3 GRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHFHC 62 GRI D DI AIRE A I+++VG+YVQL+ AG DSLKGL PF +EK+PSFHVRP G++HC Sbjct 4 GRIPDSDIQAIRERAPIDEIVGEYVQLKPAGYDSLKGLSPFKDEKTPSFHVRPQRGYYHC 63 Query 63 FGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDR-GSRSRLLAAN 121 F G+GGDV++F+ ++E VSF EAVE +A +IG+ I+Y G +T + ++ G+R RL+AAN Sbjct 64 FSTGKGGDVFSFLMEMEQVSFPEAVEAVAQKIGYHINYQGGSTGARDEKPGTRRRLIAAN 123 Query 122 AAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEFE 181 AA FY Q L++ +AA R++L +R F +F CG+AP GWD+ TKHL R GF FE Sbjct 124 KAAHEFYRQQLETPQAAAGREFLLDRGFSKEIIYEFECGYAPEGWDTATKHLLRMGFSFE 183 Query 182 ELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETLL 241 EL+AAG+S+ G+ GP+DRFHRRLLWPI+ +G V+GFGAR+LFDDD + KY+NTPET+L Sbjct 184 ELDAAGISKMGKRGPIDRFHRRLLWPIKDLSGNVIGFGARKLFDDDKL-GKYMNTPETML 242 Query 242 YKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAMLR 301 Y KS V+FG+DLAKR+IA+ HQAVVVEGYTDVMAM+ AGV TAVASCGTAFG +HL +LR Sbjct 243 YHKSKVLFGLDLAKRNIAEQHQAVVVEGYTDVMAMYAAGVKTAVASCGTAFGADHLQVLR 302 Query 302 RLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKCG 361 RLM+DDS+F GELIY FDGDEAG+ AA++AF+GEQK GQSFV+VAPDGMDPCDLRL+ G Sbjct 303 RLMLDDSYFHGELIYTFDGDEAGQKAAMRAFEGEQKFTGQSFVSVAPDGMDPCDLRLERG 362 Query 362 DAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYARQ 421 DAA+RDLVA R P+FEF IR+ I++ +DSAEGR+ ALRR VP+V QI+D L+ EYAR+ Sbjct 363 DAAVRDLVADRIPMFEFVIRSVISDFSIDSAEGRLQALRRAVPVVAQIRDEPLQREYARR 422 Query 422 LAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRPDPRD 481 LAGWVGW D +V+ +VR EA++ K + R S +A + P + P PR+ Sbjct 423 LAGWVGWPDPEEVLHQVRQEARKPKKEQRPRFASLEQTSSAPAQSNAPVMHI---PGPRE 479 Query 482 PTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLS--GAQ 539 P LWPQREALK ALQYP +AG FD +T + +++ Y +R AI T GG +AG G + Sbjct 480 PHLWPQREALKLALQYPQIAGSYFDGITEDAYSNEAYRTIRRAISTLGGVTAGAEQPGVE 539 Query 540 WLDMVRQQTTSTVTSALISELGVEAIQV-----DDDKLPRYIAGVLARLQEVWLGRQIAE 594 WL V + + +SEL VE I++ D L Y VL+RLQE +G Q+A+ Sbjct 540 WLAAVAGEMPDLMARNFVSELAVEPIKLGETGNPDTDLEAYADSVLSRLQEARVGDQVAQ 599 Query 595 VKSKLQRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQA 632 +K++L RM P + + Y++LF DLVA+E RR L ++A Sbjct 600 LKAQLGRMRPSDDEESYNSLFADLVALEQARRELNDRA 637 >gi|311741384|ref|ZP_07715208.1| DNA primase [Corynebacterium pseudogenitalium ATCC 33035] gi|311303554|gb|EFQ79633.1| DNA primase [Corynebacterium pseudogenitalium ATCC 33035] Length=640 Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust. Identities = 360/638 (57%), Positives = 462/638 (73%), Gaps = 15/638 (2%) Query 2 SGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHFH 61 GRI D DI AIRE A +E++VG+YVQL+ AG DSLKGL PF +EK+PSFHVRP G++H Sbjct 3 KGRIPDSDIQAIRERAPLEEIVGEYVQLKPAGHDSLKGLSPFKDEKTPSFHVRPQRGYYH 62 Query 62 CFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQRDR-GSRSRLLAA 120 CF G+GGDV++F+ ++E VSF EAVE +A +IG+ I+Y G +T + ++ G+R RL+AA Sbjct 63 CFSTGKGGDVFSFLMEMEQVSFPEAVEAVAQKIGYHINYQGGSTGARTEKPGTRQRLIAA 122 Query 121 NAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFEF 180 N AA FY Q L++ +AA AR +L +R F F CG+AP GWD+ TKHL R GF F Sbjct 123 NKAAHEFYRQQLETPQAATARDFLLDRGFSREVIYDFECGYAPEGWDTATKHLLRLGFSF 182 Query 181 EELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETL 240 EELEAAG+S+ G+ GP+DRFHRRLLWPI+ +G V+GFGAR+LFDDD + KY+NTPET+ Sbjct 183 EELEAAGISKMGKRGPIDRFHRRLLWPIKDLSGNVIGFGARKLFDDDKL-GKYMNTPETM 241 Query 241 LYKKSSVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGGEHLAML 300 LY KS V+FG+DLAKR+IA HQAVVVEGYTDVMAM+ AGV TAVASCGTAFGGEHL +L Sbjct 242 LYHKSKVLFGLDLAKRNIADNHQAVVVEGYTDVMAMYAAGVKTAVASCGTAFGGEHLQVL 301 Query 301 RRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKC 360 RRLM+DDS+F GELIY FDGDEAG+ AA++AFDGEQK GQSFV+VAPDGMDPCDLRL+ Sbjct 302 RRLMLDDSYFNGELIYTFDGDEAGQKAAMRAFDGEQKFTGQSFVSVAPDGMDPCDLRLQK 361 Query 361 GDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYAR 420 GDAA+R+L+A R P+FEF I++ IAE +D+AEGR+ ALRR VP+V QI+D L+ EYAR Sbjct 362 GDAAVRELIADRIPMFEFVIQSVIAEYRIDTAEGRLQALRRAVPVVAQIRDQPLQREYAR 421 Query 421 QLAGWVGWADVAQVIGRVRGEAKRTK---HPRLGRLGSTTIARAAQR-PTAGPPTELAVR 476 +LAGWVGWA+ +V+ +VR EA++ K P + R + A Q P PP+ Sbjct 422 RLAGWVGWANPEEVLQQVRAEARKPKKAEKPTIRRFDNAKQQPAQQDVPMIHPPS----- 476 Query 477 PDPRDPTLWPQREALKSALQYPALAGPVFDALTVEGFTHPEYAAVRAAIDTAGGTSAGLS 536 P++ LWPQREALK ALQ P +AG FD +T + +T+ Y VR AI TAGG + G S Sbjct 477 --PKETHLWPQREALKLALQMPQVAGSYFDGITADAYTNDAYRLVRQAISTAGGAAQGAS 534 Query 537 --GAQWLDMVRQQTTSTVTSALISELGVEAIQVDDDKLPRYIAGVLARLQEVWLGRQIAE 594 +W+ V + +SEL VEAI D +Y VL+RLQE +G QIA+ Sbjct 535 MPAVEWIAAVAGEMQDLTGRNFVSELAVEAILPTDVGPEKYADSVLSRLQETVVGDQIAQ 594 Query 595 VKSKLQRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQA 632 +K++L RM P + Y++LF DLVA+E RR L ++A Sbjct 595 LKARLGRMRPSDDEASYNSLFADLVALEQARRELNDRA 632 Lambda K H 0.321 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1477200037280 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40