BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2345 Length=660 Score E Sequences producing significant alignments: (Bits) Value gi|15609482|ref|NP_216861.1| transmembrane protein [Mycobacteriu... 1298 0.0 gi|340627356|ref|YP_004745808.1| hypothetical protein MCAN_23771... 1296 0.0 gi|289575037|ref|ZP_06455264.1| transmembrane protein [Mycobacte... 1295 0.0 gi|339632370|ref|YP_004724012.1| hypothetical protein MAF_23580 ... 1274 0.0 gi|289447986|ref|ZP_06437730.1| conserved transmembrane protein ... 1161 0.0 gi|183983632|ref|YP_001851923.1| hypothetical protein MMAR_3652 ... 858 0.0 gi|296166322|ref|ZP_06848759.1| transmembrane protein [Mycobacte... 822 0.0 gi|254819374|ref|ZP_05224375.1| hypothetical protein MintA_05590... 818 0.0 gi|342857482|ref|ZP_08714138.1| hypothetical protein MCOL_01360 ... 797 0.0 gi|118467214|ref|YP_881259.1| hypothetical protein MAV_2041 [Myc... 760 0.0 gi|336461679|gb|EGO40542.1| beta-propeller domain-containing pro... 753 0.0 gi|240170989|ref|ZP_04749648.1| hypothetical protein MkanA1_1688... 746 0.0 gi|118471886|ref|YP_888756.1| transmembrane protein [Mycobacteri... 660 0.0 gi|126436033|ref|YP_001071724.1| hypothetical protein Mjls_3455 ... 645 0.0 gi|108800410|ref|YP_640607.1| hypothetical protein Mmcs_3444 [My... 620 2e-175 gi|119869539|ref|YP_939491.1| hypothetical protein Mkms_3507 [My... 620 2e-175 gi|120404774|ref|YP_954603.1| hypothetical protein Mvan_3816 [My... 591 2e-166 gi|254774766|ref|ZP_05216282.1| hypothetical protein MaviaA2_088... 577 3e-162 gi|145223307|ref|YP_001133985.1| hypothetical protein Mflv_2720 ... 570 4e-160 gi|41408231|ref|NP_961067.1| hypothetical protein MAP2133 [Mycob... 569 5e-160 gi|169628796|ref|YP_001702445.1| hypothetical protein MAB_1706c ... 516 4e-144 gi|333990212|ref|YP_004522826.1| transmembrane protein [Mycobact... 445 1e-122 gi|111018228|ref|YP_701200.1| sensory rhodopsin II transducer [R... 420 4e-115 gi|325676982|ref|ZP_08156653.1| sensory rhodopsin II transducer ... 415 2e-113 gi|226360353|ref|YP_002778131.1| hypothetical protein ROP_09390 ... 413 7e-113 gi|312140271|ref|YP_004007607.1| membrane protein [Rhodococcus e... 412 9e-113 gi|229490311|ref|ZP_04384153.1| putative conserved transmembrane... 404 3e-110 gi|226307189|ref|YP_002767149.1| hypothetical protein RER_37020 ... 404 3e-110 gi|54023431|ref|YP_117673.1| hypothetical protein nfa14640 [Noca... 372 1e-100 gi|333918884|ref|YP_004492465.1| sensory rhodopsin II transducer... 368 2e-99 gi|343928665|ref|ZP_08768110.1| hypothetical protein GOALK_120_0... 334 3e-89 gi|326383872|ref|ZP_08205556.1| hypothetical protein SCNU_13093 ... 313 8e-83 gi|262204593|ref|YP_003275801.1| hypothetical protein Gbro_4793 ... 281 3e-73 gi|258655344|ref|YP_003204500.1| hypothetical protein Namu_5245 ... 256 1e-65 gi|213965823|ref|ZP_03394015.1| putative conserved transmembrane... 255 2e-65 gi|332669169|ref|YP_004452177.1| methanol dehydrogenase [Cellulo... 248 3e-63 gi|300780728|ref|ZP_07090582.1| conserved hypothetical protein [... 239 1e-60 gi|152965421|ref|YP_001361205.1| hypothetical protein Krad_1453 ... 235 2e-59 gi|296119850|ref|ZP_06838404.1| putative secreted protein [Coryn... 233 9e-59 gi|284989085|ref|YP_003407639.1| hypothetical protein Gobs_0486 ... 232 1e-58 gi|331695502|ref|YP_004331741.1| hypothetical protein Psed_1652 ... 232 2e-58 gi|148272317|ref|YP_001221878.1| hypothetical protein CMM_1137 [... 229 9e-58 gi|145296229|ref|YP_001139050.1| hypothetical protein cgR_2146 [... 226 9e-57 gi|170781853|ref|YP_001710185.1| putative integral membrane prot... 225 2e-56 gi|21325046|dbj|BAB99668.1| Chromosome segregation ATPases [Cory... 223 7e-56 gi|19553473|ref|NP_601475.1| chromosome segregation ATPase [Cory... 223 8e-56 gi|269796420|ref|YP_003315875.1| methanol dehydrogenase [Sanguib... 223 1e-55 gi|344044348|gb|EGV40026.1| hypothetical protein CgS9114_10377 [... 221 4e-55 gi|227504564|ref|ZP_03934613.1| conserved transmembrane protein ... 220 5e-55 gi|225021790|ref|ZP_03710982.1| hypothetical protein CORMATOL_01... 218 2e-54 >gi|15609482|ref|NP_216861.1| transmembrane protein [Mycobacterium tuberculosis H37Rv] gi|15841852|ref|NP_336889.1| hypothetical protein MT2410 [Mycobacterium tuberculosis CDC1551] gi|31793530|ref|NP_856023.1| transmembrane protein [Mycobacterium bovis AF2122/97] 71 more sequence titles Length=660 Score = 1298 bits (3360), Expect = 0.0, Method: Compositional matrix adjust. Identities = 660/660 (100%), Positives = 660/660 (100%), Gaps = 0/660 (0%) Query 1 MRLVRLLGMVLTILAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYA 60 MRLVRLLGMVLTILAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYA Sbjct 1 MRLVRLLGMVLTILAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYA 60 Query 61 DRRIRLWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVS 120 DRRIRLWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVS Sbjct 61 DRRIRLWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVS 120 Query 121 EGQVDNVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLV 180 EGQVDNVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLV Sbjct 121 EGQVDNVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLV 180 Query 181 VMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELAL 240 VMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELAL Sbjct 181 VMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELAL 240 Query 241 AIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHAD 300 AIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHAD Sbjct 241 AIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHAD 300 Query 301 RELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSI 360 RELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSI Sbjct 301 RELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSI 360 Query 361 AGNVTTATERLAFADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSA 420 AGNVTTATERLAFADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSA Sbjct 361 AGNVTTATERLAFADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSA 420 Query 421 ATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGA 480 ATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGA Sbjct 421 ATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGA 480 Query 481 ADPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRR 540 ADPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRR Sbjct 481 ADPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRR 540 Query 541 GSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQRA 600 GSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQRA Sbjct 541 GSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQRA 600 Query 601 YTRRGGNNAGAILGGIIIGDLLSGGTRGGLGGWIPTSFGGSSNAPGSSPDGGFLGGGGRF 660 YTRRGGNNAGAILGGIIIGDLLSGGTRGGLGGWIPTSFGGSSNAPGSSPDGGFLGGGGRF Sbjct 601 YTRRGGNNAGAILGGIIIGDLLSGGTRGGLGGWIPTSFGGSSNAPGSSPDGGFLGGGGRF 660 >gi|340627356|ref|YP_004745808.1| hypothetical protein MCAN_23771 [Mycobacterium canettii CIPT 140010059] gi|340005546|emb|CCC44708.1| putative conserved transmembrane protein [Mycobacterium canettii CIPT 140010059] Length=660 Score = 1296 bits (3353), Expect = 0.0, Method: Compositional matrix adjust. Identities = 658/660 (99%), Positives = 659/660 (99%), Gaps = 0/660 (0%) Query 1 MRLVRLLGMVLTILAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYA 60 MRLVRLLGMVLTILAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYA Sbjct 1 MRLVRLLGMVLTILAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYA 60 Query 61 DRRIRLWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVS 120 DRRIRLWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVS Sbjct 61 DRRIRLWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVS 120 Query 121 EGQVDNVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLV 180 EGQVDNVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLV Sbjct 121 EGQVDNVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLV 180 Query 181 VMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELAL 240 VMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELAL Sbjct 181 VMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELAL 240 Query 241 AIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHAD 300 AIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDD+TPETPAQRRELLTRVIVSAAHAD Sbjct 241 AIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDSTPETPAQRRELLTRVIVSAAHAD 300 Query 301 RELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSI 360 RELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSI Sbjct 301 RELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSI 360 Query 361 AGNVTTATERLAFADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSA 420 AGNVTTATERLAFADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSA Sbjct 361 AGNVTTATERLAFADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSA 420 Query 421 ATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGA 480 ATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGA Sbjct 421 ATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGA 480 Query 481 ADPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRR 540 ADPLTAFDQLTK DADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRR Sbjct 481 ADPLTAFDQLTKADADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRR 540 Query 541 GSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQRA 600 GSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQRA Sbjct 541 GSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQRA 600 Query 601 YTRRGGNNAGAILGGIIIGDLLSGGTRGGLGGWIPTSFGGSSNAPGSSPDGGFLGGGGRF 660 YTRRGGNNAGAILGGIIIGDLLSGGTRGGLGGWIPTSFGGSSNAPGSSPDGGFLGGGGRF Sbjct 601 YTRRGGNNAGAILGGIIIGDLLSGGTRGGLGGWIPTSFGGSSNAPGSSPDGGFLGGGGRF 660 >gi|289575037|ref|ZP_06455264.1| transmembrane protein [Mycobacterium tuberculosis K85] gi|289539468|gb|EFD44046.1| transmembrane protein [Mycobacterium tuberculosis K85] Length=660 Score = 1295 bits (3350), Expect = 0.0, Method: Compositional matrix adjust. Identities = 658/660 (99%), Positives = 659/660 (99%), Gaps = 0/660 (0%) Query 1 MRLVRLLGMVLTILAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYA 60 MRLVRLLGMVLTILAAGLLLGPPAGAQPPFRL NYVTDNAGVLTSSGRTAVTAAVDRLYA Sbjct 1 MRLVRLLGMVLTILAAGLLLGPPAGAQPPFRLPNYVTDNAGVLTSSGRTAVTAAVDRLYA 60 Query 61 DRRIRLWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVS 120 DRRIRLWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVS Sbjct 61 DRRIRLWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVS 120 Query 121 EGQVDNVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLV 180 EGQVDNVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLV Sbjct 121 EGQVDNVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLV 180 Query 181 VMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELAL 240 VMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELAL Sbjct 181 VMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELAL 240 Query 241 AIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHAD 300 AIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHAD Sbjct 241 AIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHAD 300 Query 301 RELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSI 360 RELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSI Sbjct 301 RELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSI 360 Query 361 AGNVTTATERLAFADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSA 420 AGNVTTATERLAFA+RNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSA Sbjct 361 AGNVTTATERLAFAERNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSA 420 Query 421 ATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGA 480 ATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGA Sbjct 421 ATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGA 480 Query 481 ADPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRR 540 ADPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRR Sbjct 481 ADPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRR 540 Query 541 GSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQRA 600 GSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQRA Sbjct 541 GSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQRA 600 Query 601 YTRRGGNNAGAILGGIIIGDLLSGGTRGGLGGWIPTSFGGSSNAPGSSPDGGFLGGGGRF 660 YTRRGGNNAGAILGGIIIGDLLSGGTRGGLGGWIPTSFGGSSNAPGSSPDGGFLGGGGRF Sbjct 601 YTRRGGNNAGAILGGIIIGDLLSGGTRGGLGGWIPTSFGGSSNAPGSSPDGGFLGGGGRF 660 >gi|339632370|ref|YP_004724012.1| hypothetical protein MAF_23580 [Mycobacterium africanum GM041182] gi|339331726|emb|CCC27428.1| putative conserved transmembrane protein [Mycobacterium africanum GM041182] Length=661 Score = 1274 bits (3296), Expect = 0.0, Method: Compositional matrix adjust. Identities = 649/658 (99%), Positives = 650/658 (99%), Gaps = 0/658 (0%) Query 1 MRLVRLLGMVLTILAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYA 60 MRLVRLLGMVLTILAAGLLLGPPAGAQPPFRL NYVTDNAGVLTSSGRTAVTAAVDRLYA Sbjct 1 MRLVRLLGMVLTILAAGLLLGPPAGAQPPFRLPNYVTDNAGVLTSSGRTAVTAAVDRLYA 60 Query 61 DRRIRLWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVS 120 DRRIRLWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVS Sbjct 61 DRRIRLWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVS 120 Query 121 EGQVDNVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLV 180 EGQVDNVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLV Sbjct 121 EGQVDNVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLV 180 Query 181 VMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELAL 240 VMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELAL Sbjct 181 VMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELAL 240 Query 241 AIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHAD 300 AIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHAD Sbjct 241 AIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHAD 300 Query 301 RELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSI 360 RELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSI Sbjct 301 RELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSI 360 Query 361 AGNVTTATERLAFADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSA 420 AGNVTTATERLAFA+RNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSA Sbjct 361 AGNVTTATERLAFAERNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSA 420 Query 421 ATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGA 480 ATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGA Sbjct 421 ATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGA 480 Query 481 ADPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRR 540 ADPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRR Sbjct 481 ADPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRR 540 Query 541 GSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQRA 600 GSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQRA Sbjct 541 GSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQRA 600 Query 601 YTRRGGNNAGAILGGIIIGDLLSGGTRGGLGGWIPTSFGGSSNAPGSSPDGGFLGGGG 658 YTRRGGNNAGAILGGIIIGDLLSGGTRGGLGGWIPTSFGGSSNAPGSSP G G Sbjct 601 YTRRGGNNAGAILGGIIIGDLLSGGTRGGLGGWIPTSFGGSSNAPGSSPTAGSWAAAG 658 >gi|289447986|ref|ZP_06437730.1| conserved transmembrane protein [Mycobacterium tuberculosis CPHL_A] gi|289420944|gb|EFD18145.1| conserved transmembrane protein [Mycobacterium tuberculosis CPHL_A] Length=622 Score = 1161 bits (3004), Expect = 0.0, Method: Compositional matrix adjust. Identities = 596/596 (100%), Positives = 596/596 (100%), Gaps = 0/596 (0%) Query 1 MRLVRLLGMVLTILAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYA 60 MRLVRLLGMVLTILAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYA Sbjct 1 MRLVRLLGMVLTILAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYA 60 Query 61 DRRIRLWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVS 120 DRRIRLWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVS Sbjct 61 DRRIRLWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVS 120 Query 121 EGQVDNVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLV 180 EGQVDNVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLV Sbjct 121 EGQVDNVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLV 180 Query 181 VMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELAL 240 VMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELAL Sbjct 181 VMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELAL 240 Query 241 AIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHAD 300 AIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHAD Sbjct 241 AIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHAD 300 Query 301 RELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSI 360 RELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSI Sbjct 301 RELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSI 360 Query 361 AGNVTTATERLAFADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSA 420 AGNVTTATERLAFADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSA Sbjct 361 AGNVTTATERLAFADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSA 420 Query 421 ATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGA 480 ATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGA Sbjct 421 ATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGA 480 Query 481 ADPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRR 540 ADPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRR Sbjct 481 ADPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRR 540 Query 541 GSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQS 596 GSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQS Sbjct 541 GSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQS 596 >gi|183983632|ref|YP_001851923.1| hypothetical protein MMAR_3652 [Mycobacterium marinum M] gi|183176958|gb|ACC42068.1| conserved hypothetical secreted protein [Mycobacterium marinum M] Length=662 Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust. Identities = 464/638 (73%), Positives = 551/638 (87%), Gaps = 2/638 (0%) Query 1 MRLVRLLGMVLTILAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYA 60 MR+ RLLG++L I GLLL PP+GAQPPFRL++YVTDNA LTSSGR VT AV++LY Sbjct 1 MRIPRLLGVILMIFTTGLLLAPPSGAQPPFRLASYVTDNADALTSSGRAKVTTAVNQLYT 60 Query 61 DRRIRLWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVS 120 +R +RLWVVYV++FSGQSA NWAQRT +TSELG+YDA+LAVAT R YAFLVPS + G++ Sbjct 61 ERHVRLWVVYVDDFSGQSATNWAQRTMQTSELGDYDAILAVATVARSYAFLVPSTVDGIT 120 Query 121 EGQVDNVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLV 180 QV+++RR +IEP L DGD++GAAVAAA+GLN+SP S + LLV + ++ + VA+ + Sbjct 121 SSQVESLRRNKIEPKLRDGDWAGAAVAAADGLNKSPRPSGGIPLLVVLSVLAVAVAIFWI 180 Query 181 VMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELAL 240 VMR+R RRR + LAAARRVDPT+ ALAAVPL LD+LSRSMVVDVDNAVRTS+NELA+ Sbjct 181 VMRYRASRRRTNALAAARRVDPTDARALAAVPLDVLDELSRSMVVDVDNAVRTSSNELAV 240 Query 241 AIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHAD 300 AI+EFGE+RTAPF+QAV+NAKAALSQAF+VRQQLDD+TPETPAQRR+LLTRVIVSAA+AD Sbjct 241 AIDEFGEQRTAPFSQAVSNAKAALSQAFSVRQQLDDSTPETPAQRRDLLTRVIVSAANAD 300 Query 301 RELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSI 360 REL SQTEAFEKLRDLVINAPARLDLLTQ+Y+ELTTRI PT+QRL ELH EF A A++SI Sbjct 301 RELESQTEAFEKLRDLVINAPARLDLLTQRYIELTTRIAPTEQRLVELHDEFGATALSSI 360 Query 361 AGNVTTATERLAFADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSA 420 + NV +A E LAFAD NIS+AR+L+ +AVSG+Q GLVDAVRAAESALGQAR+LLDAVDSA Sbjct 361 SANVASAHELLAFADSNISSARELSAKAVSGQQTGLVDAVRAAESALGQARSLLDAVDSA 420 Query 421 ATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRAR-- 478 A DIRHAVA++P+V+ADIQ GI+ AN+ LQ++ ++ +LIAARDAAARA+D AR Sbjct 421 AGDIRHAVATMPSVLADIQAGIQHANEQLQKSPANKSAYAAELIAARDAAARAVDNARVT 480 Query 479 GAADPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDT 538 GAADPL+AF QLT DADLDRLLA +A+EQA A+ L RSLEQALFTAESR+RAVS+YIDT Sbjct 481 GAADPLSAFAQLTTADADLDRLLAAIAQEQANAEHLRRSLEQALFTAESRIRAVSDYIDT 540 Query 539 RRGSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQ 598 RRGSIGPEARTRLAEA R+L+AA +S+NPTEAIA ANAASTLAA+AQSLAN+DVQ+AQ Sbjct 541 RRGSIGPEARTRLAEAGRRLDAAQSYRSTNPTEAIAQANAASTLAANAQSLANSDVQAAQ 600 Query 599 RAYTRRGGNNAGAILGGIIIGDLLSGGTRGGLGGWIPT 636 RAYTR+GGNN GA+LGGIIIGDLLSGG RGG GGW PT Sbjct 601 RAYTRQGGNNTGAVLGGIIIGDLLSGGMRGGFGGWSPT 638 >gi|296166322|ref|ZP_06848759.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898331|gb|EFG77900.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=665 Score = 822 bits (2123), Expect = 0.0, Method: Compositional matrix adjust. Identities = 472/642 (74%), Positives = 547/642 (86%), Gaps = 6/642 (0%) Query 1 MRLVRLLGMVLTILA----AGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVD 56 MR RLLG++ ILA GLL+ P AGAQ PFRL++YVTDNAGVL+ SGRTAVT+AV Sbjct 3 MRTARLLGVIGAILAVGFGGGLLVAPAAGAQAPFRLADYVTDNAGVLSDSGRTAVTSAVG 62 Query 57 RLYADRRIRLWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAM 116 LY DR IRLWVVYV++FSGQ A+NWAQRT R S+LG+YDALLAVAT R YAFLVP+A+ Sbjct 63 TLYTDRHIRLWVVYVDDFSGQGAVNWAQRTARASDLGDYDALLAVATASRAYAFLVPTAV 122 Query 117 PGVSEGQVDNVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVA 176 V+ QVD++R +IEPALH+GD+SGAAVAAA+GLN SP SS RV LLVT+ II+ +A Sbjct 123 KSVTARQVDDLRHNKIEPALHNGDWSGAAVAAADGLNTSPGSSGRVALLVTLAIILAALA 182 Query 177 VLLVVMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTN 236 VLL++MR+R RRRRA +LAAARRVDPT+ ALA VPLQALDDLSR +VVDVDNAVRTS+N Sbjct 183 VLLLIMRYRRRRRRAADLAAARRVDPTDPRALAGVPLQALDDLSRELVVDVDNAVRTSSN 242 Query 237 ELALAIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSA 296 EL LAI EFGE RT PFT+AV NAKAALSQAFT+RQQLDDNTPETP QRRELLTRV+VSA Sbjct 243 ELDLAIAEFGEERTRPFTEAVENAKAALSQAFTIRQQLDDNTPETPDQRRELLTRVVVSA 302 Query 297 AHADRELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAA 356 A ADREL SQTEAFE LRDLVINAP+RLD LTQQYVELT+RI P++QRLAELH +FDAAA Sbjct 303 AGADRELESQTEAFENLRDLVINAPSRLDALTQQYVELTSRIAPSEQRLAELHGQFDAAA 362 Query 357 MTSIAGNVTTATERLAFADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDA 416 ++S++GNV TA ERLAFADRNIS ARDLA +AVSGRQAGLVDAVRAAESALGQAR LLD+ Sbjct 363 LSSVSGNVATAEERLAFADRNISTARDLAGEAVSGRQAGLVDAVRAAESALGQARGLLDS 422 Query 417 VDSAATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDR 476 VD+AATDI+HA+ LP+ V DIQ IKRA++ LQ+AQ ++ GDLIAARDAAARA D Sbjct 423 VDNAATDIQHAIDRLPSAVTDIQADIKRADELLQKAQATKSAHAGDLIAARDAAARAADG 482 Query 477 ARGAA--DPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSE 534 AR A DPL AF Q+ K DADL+ +L TLA EQATA++LNR+ EQA+FTAESRVRAVS+ Sbjct 483 ARAGAATDPLGAFAQVAKADADLNGVLVTLAREQATAEQLNRAFEQAVFTAESRVRAVSD 542 Query 535 YIDTRRGSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADV 594 YIDTRRGS+GPEARTRLAEAKR L+AA D++++NPTEAI++ANAASTLAA AQSLANADV Sbjct 543 YIDTRRGSVGPEARTRLAEAKRHLQAARDQRAANPTEAISHANAASTLAAQAQSLANADV 602 Query 595 QSAQRAYTRRGGNNAGAILGGIIIGDLLSGGTRGGLGGWIPT 636 QSAQRAY R GG++ GA+LGGIIIG++L GG RGG GGW PT Sbjct 603 QSAQRAYARGGGSDMGAMLGGIIIGNVLGGGMRGGFGGWSPT 644 >gi|254819374|ref|ZP_05224375.1| hypothetical protein MintA_05590 [Mycobacterium intracellulare ATCC 13950] Length=658 Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust. Identities = 455/617 (74%), Positives = 525/617 (86%), Gaps = 6/617 (0%) Query 22 PPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWVVYVENFSGQSALN 81 P AGAQP FRL++YVTDNAG L+ SGR+ VTAAV++LY DR IRLWVVYV++FSGQS Sbjct 26 PAAGAQPSFRLADYVTDNAGALSDSGRSTVTAAVNKLYTDRHIRLWVVYVDDFSGQSPTG 85 Query 82 WAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVSEGQVDNVRRYQIEPALHDGDY 141 WAQ T R S+LG YDALLAVATT R YAFLVPS + V+ GQVD++RR +IEPALH+GD+ Sbjct 86 WAQGTVRASDLGGYDALLAVATTSRAYAFLVPSTIKSVNAGQVDSLRRNKIEPALHNGDW 145 Query 142 SGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLVVMRHRNRRRRADELAAARRVD 201 SGAAVAAANGL+ SP SS RV+LL T+ I+I +A LL+VMRHR +RRRA LAAARRVD Sbjct 146 SGAAVAAANGLDASPGSSGRVILLATLAGILIALAGLLLVMRHRGQRRRAAALAAARRVD 205 Query 202 PTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELALAIEEFGERRTAPFTQAVNNAK 261 PT+V ALAA+PLQ LDDLSR++VVDVDNA+RTS NEL LA+ EFGE RT PFT AV NAK Sbjct 206 PTDVDALAALPLQTLDDLSRALVVDVDNALRTSANELDLAVGEFGEERTRPFTSAVANAK 265 Query 262 AALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELASQTEAFEKLRDLVINAP 321 AALSQAFTVRQQLDD+TPETPAQRRELLT+VIVSAA ADREL SQTEAFEKLRDLVINA Sbjct 266 AALSQAFTVRQQLDDSTPETPAQRRELLTQVIVSAARADRELESQTEAFEKLRDLVINAA 325 Query 322 ARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNVTTATERLAFADRNISAA 381 +RLD LTQQYVELTTR+ P +QRLA LH +F AAA+TS++GNVTTA ERLAFADRNI A Sbjct 326 SRLDALTQQYVELTTRLAPAEQRLAALHHDFSAAALTSVSGNVTTAKERLAFADRNIGTA 385 Query 382 RDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSAATDIRHAVASLPAVVADIQTG 441 R+LA AV+G QAGLVDAVRAAESALGQARALLDAVD+AA+DI+HA+ LP+ VAD + Sbjct 386 RELAAHAVTGGQAGLVDAVRAAESALGQARALLDAVDNAASDIQHAIDGLPSAVADTKDD 445 Query 442 IKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRAR--GAADPLTAFDQLTKVDADLDR 499 I RAN+ LQ+ + R+GDL+AARDAA RA++ AR G+ DPL AF Q+TK DA L+ Sbjct 446 IARANELLQK----KPTRSGDLVAARDAATRAVESARAGGSEDPLAAFGQVTKADAALNG 501 Query 500 LLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRRGSIGPEARTRLAEAKRQLE 559 LLATL EEQATA+RLNRSLEQALFTA+SRVRAVS+YIDTRRGS+GP+ARTRLAEAKR L+ Sbjct 502 LLATLTEEQATAERLNRSLEQALFTAQSRVRAVSDYIDTRRGSVGPDARTRLAEAKRHLQ 561 Query 560 AAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQRAYTRRGGNNAGAILGGIIIG 619 AA D+ ++NP EAIA+ANAASTLAAHAQSLAN DVQ+ QRAYTR GG++ GA+LGGIIIG Sbjct 562 AAQDKGATNPNEAIAHANAASTLAAHAQSLANDDVQAMQRAYTRGGGSDMGAMLGGIIIG 621 Query 620 DLLSGGTRGGLGGWIPT 636 DLLSGG RGG GGW PT Sbjct 622 DLLSGGMRGGFGGWSPT 638 >gi|342857482|ref|ZP_08714138.1| hypothetical protein MCOL_01360 [Mycobacterium colombiense CECT 3035] gi|342134815|gb|EGT87981.1| hypothetical protein MCOL_01360 [Mycobacterium colombiense CECT 3035] Length=663 Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust. Identities = 449/638 (71%), Positives = 530/638 (84%), Gaps = 3/638 (0%) Query 2 RLVRLLGMVLTI-LAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYA 60 RL+ + +LT+ GLLL P AGAQPPFRL++Y+TD AG L+ SG +AV++A+++LY Sbjct 6 RLIAAIATILTVGFGGGLLLAPAAGAQPPFRLADYITDPAGALSDSGHSAVSSALNKLYT 65 Query 61 DRRIRLWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVS 120 DR IRLWVVYV+NFSGQ+ WAQRT +S+LG+YDALLAV TT REYAFLVPS + ++ Sbjct 66 DRHIRLWVVYVDNFSGQTPTGWAQRTASSSDLGDYDALLAVGTTSREYAFLVPSTIKSIN 125 Query 121 EGQVDNVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLV 180 QVDN+RR +IEPALH+GD+SGAAVAAANGL+ SP SS RV LL + I++ +AVLL+ Sbjct 126 ANQVDNLRRNRIEPALHNGDWSGAAVAAANGLDASPGSSGRVALLAVLAGILVSLAVLLL 185 Query 181 VMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELAL 240 VMR+R +RRRA LAAARRVDPT+ ALAAVP QALDDLSR++VVDVDNAVRTS NEL L Sbjct 186 VMRYRGKRRRAAALAAARRVDPTDADALAAVPPQALDDLSRALVVDVDNAVRTSANELEL 245 Query 241 AIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHAD 300 A+ EFGE RT PFTQAV NAKAALSQAFT+RQQLDD TPETPAQRRELLT+VIVSAA AD Sbjct 246 AVSEFGEARTQPFTQAVTNAKAALSQAFTIRQQLDDETPETPAQRRELLTQVIVSAARAD 305 Query 301 RELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSI 360 REL SQTEAFEKLRDLVINAP RLD LTQQYVELT+RI P ++RLA LH +F A A+TS+ Sbjct 306 RELESQTEAFEKLRDLVINAPTRLDSLTQQYVELTSRIAPAEERLALLHKDFSAVALTSV 365 Query 361 AGNVTTATERLAFADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSA 420 +GNVT A ERLAFADRNI +AR LA QAVSG+QAGLVDAVRAAESALGQARALLDAVD+A Sbjct 366 SGNVTAAKERLAFADRNIGSARGLAAQAVSGQQAGLVDAVRAAESALGQARALLDAVDNA 425 Query 421 ATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGA 480 A DI+HA+ LP+ + DIQ I+RAN+ L++ +T GDL+ ARDAA RA++ AR Sbjct 426 AGDIQHAIDRLPSAMTDIQNDIERANELLKKTPSAKTAHGGDLVVARDAAVRAVESARAG 485 Query 481 A--DPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDT 538 A DPL F QLTK DA L+ LLATLA+EQA A++LNRS+EQALFTA SRVRAVS+Y+DT Sbjct 486 ASDDPLGEFGQLTKADAGLNGLLATLAQEQAAAEQLNRSMEQALFTATSRVRAVSDYVDT 545 Query 539 RRGSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQ 598 RRGSIGPEARTRLAEA+R L+AA D++S+ PTEAIA+ANAASTLAA AQ+LAN DVQ AQ Sbjct 546 RRGSIGPEARTRLAEARRHLQAAEDKRSTLPTEAIAHANAASTLAATAQALANDDVQLAQ 605 Query 599 RAYTRRGGNNAGAILGGIIIGDLLSGGTRGGLGGWIPT 636 RAY RGG++ GA+LGGIIIG++LSGG RGG GGW PT Sbjct 606 RAYMGRGGSDMGAMLGGIIIGNVLSGGMRGGFGGWSPT 643 >gi|118467214|ref|YP_881259.1| hypothetical protein MAV_2041 [Mycobacterium avium 104] gi|118168501|gb|ABK69398.1| conserved hypothetical protein [Mycobacterium avium 104] Length=661 Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust. Identities = 440/624 (71%), Positives = 516/624 (83%), Gaps = 3/624 (0%) Query 14 LAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWVVYVEN 73 L+AGLL PPAGAQPP RLS+Y+TD AGVL+ SGR A+T AVD+LY DR IRLWVVYV+ Sbjct 18 LSAGLL-APPAGAQPPLRLSDYLTDTAGVLSDSGRKAITTAVDKLYTDRHIRLWVVYVDT 76 Query 74 FSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVSEGQVDNVRRYQIE 133 FSGQ+A WAQ T RTS+LG+YDALLAVATT R YAFLVP + GV++ +VD +R +IE Sbjct 77 FSGQTATRWAQDTLRTSDLGDYDALLAVATTDRAYAFLVPPTIRGVNQSRVDALRHNKIE 136 Query 134 PALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLVVMRHRNRRRRADE 193 PALHDGD+SGAAVAAA GL+ +P SS RV+LL T+ +++ V LL+VMR+R RRRRA Sbjct 137 PALHDGDWSGAAVAAATGLDTAPGSSGRVILLATLAALLVAVMGLLLVMRYRGRRRRAAA 196 Query 194 LAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELALAIEEFGERRTAPF 253 LAAARR+DPT++ ALAA+PL LDDLSR++VVDVDNA+RTS NEL LA+ EFG++RT PF Sbjct 197 LAAARRLDPTDLDALAALPLPTLDDLSRALVVDVDNALRTSANELDLAVAEFGDQRTQPF 256 Query 254 TQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELASQTEAFEKL 313 TQAV NAKAALSQAFTVRQQLDD PETPAQRRELLT+VIVSAA ADREL SQTEAFE L Sbjct 257 TQAVTNAKAALSQAFTVRQQLDDGMPETPAQRRELLTQVIVSAARADRELESQTEAFEGL 316 Query 314 RDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNVTTATERLAF 373 RDLVINAP+RLD LTQQYVELT RIGP +Q+LA LH EF AAA+TS++GNVT A ERLAF Sbjct 317 RDLVINAPSRLDGLTQQYVELTARIGPAEQQLAALHNEFSAAALTSVSGNVTAAKERLAF 376 Query 374 ADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSAATDIRHAVASLPA 433 ADRNI AR+LA QAVSG+Q LVDAVRAAESALGQAR+LLDAVD AA DIRHA+ LP+ Sbjct 377 ADRNIGTARELAGQAVSGQQGRLVDAVRAAESALGQARSLLDAVDHAAGDIRHAIDQLPS 436 Query 434 VVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGAA--DPLTAFDQLT 491 +ADI+ IKRA + L + ++G +L AARDAA RA++ AR A DPL AF QLT Sbjct 437 AMADIENDIKRAAELLAATRDTKSGHAAELAAARDAATRAVEGARAGAPDDPLGAFGQLT 496 Query 492 KVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRRGSIGPEARTRL 551 K DA L+ +LA +A+E+A A+RL RSLEQALFTA+SRVRAVS+YIDTRRGSIGPEARTRL Sbjct 497 KADAGLNAVLAAVAQERAAAERLARSLEQALFTAQSRVRAVSDYIDTRRGSIGPEARTRL 556 Query 552 AEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQRAYTRRGGNNAGA 611 AEA+R L AA DR++++P +AIA+ANAASTLAA AQSLAN DVQ+A+RAY R GG + GA Sbjct 557 AEAQRHLHAAADRRATDPADAIAHANAASTLAAEAQSLANGDVQAARRAYPRGGGGDMGA 616 Query 612 ILGGIIIGDLLSGGTRGGLGGWIP 635 +LGGIIIGDLLS G RGG GGW P Sbjct 617 MLGGIIIGDLLSSGMRGGFGGWSP 640 >gi|336461679|gb|EGO40542.1| beta-propeller domain-containing protein, methanol dehydrogenase [Mycobacterium avium subsp. paratuberculosis S397] Length=661 Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust. Identities = 439/624 (71%), Positives = 517/624 (83%), Gaps = 3/624 (0%) Query 14 LAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWVVYVEN 73 L+AGLL PPAGAQPP RLS+Y+TD AGVL+ SGR A+T AVD+LY DR IRLWVVYV+ Sbjct 18 LSAGLL-APPAGAQPPLRLSDYLTDTAGVLSDSGRKAITTAVDKLYTDRHIRLWVVYVDT 76 Query 74 FSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVSEGQVDNVRRYQIE 133 FSGQ+A WAQ T RTS+LG+YDALLAVATT R YAFLVP + GV++ +V+ +R +IE Sbjct 77 FSGQTATRWAQDTLRTSDLGDYDALLAVATTDRAYAFLVPPTIRGVNQSRVEALRHNKIE 136 Query 134 PALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLVVMRHRNRRRRADE 193 PALHDGD+SGAAVAAA GL+ +P SS RV+LL T+ +++ V LL+VMR+R RRRRA Sbjct 137 PALHDGDWSGAAVAAATGLDTAPGSSGRVILLATLAALLVAVMALLLVMRYRGRRRRAAA 196 Query 194 LAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELALAIEEFGERRTAPF 253 LAAARR+DPT++ ALAA+PL LDDLSR++VVDVDNA+RTS NEL LA+ EFG++RT PF Sbjct 197 LAAARRLDPTDLDALAALPLPTLDDLSRALVVDVDNALRTSANELDLAVAEFGDQRTQPF 256 Query 254 TQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELASQTEAFEKL 313 TQAV NAKAALSQAFTVRQQLDD PETPAQRRELLT+VIVSAA ADREL SQTEAFE L Sbjct 257 TQAVTNAKAALSQAFTVRQQLDDGMPETPAQRRELLTQVIVSAARADRELESQTEAFESL 316 Query 314 RDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNVTTATERLAF 373 RDLVINAP+RLD LTQQYVELT RIGP +Q+LA LH EF AAA+TS++GNVT A ERLAF Sbjct 317 RDLVINAPSRLDGLTQQYVELTARIGPAEQQLAALHNEFSAAALTSVSGNVTAAKERLAF 376 Query 374 ADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSAATDIRHAVASLPA 433 ADRNI AR+LADQAVSG+Q LVDAVRAAESALGQAR+LLDAVD AA DIRHA+ LP+ Sbjct 377 ADRNIGTARELADQAVSGQQGRLVDAVRAAESALGQARSLLDAVDHAAGDIRHAIDQLPS 436 Query 434 VVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGAA--DPLTAFDQLT 491 +ADI+ IKRA + L + ++G +L AARDAA RA++ AR A DPL AF QLT Sbjct 437 AMADIENDIKRAAELLAATRDTKSGHAAELAAARDAATRAVEGARAGAPDDPLGAFGQLT 496 Query 492 KVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRRGSIGPEARTRL 551 K D+ L+ +LA +A+E+A A+RL RSLEQALFTA+SRVRAVS+YIDTRRGSIGPEARTRL Sbjct 497 KADSRLNAVLAAVAQERAAAERLARSLEQALFTAQSRVRAVSDYIDTRRGSIGPEARTRL 556 Query 552 AEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQRAYTRRGGNNAGA 611 AEA+R L AA DR++++P +AIA+ANAASTLAA AQSLAN DVQ+A+RAY R GG + GA Sbjct 557 AEAQRHLHAAADRRATDPADAIAHANAASTLAAEAQSLANGDVQAARRAYPRGGGGDMGA 616 Query 612 ILGGIIIGDLLSGGTRGGLGGWIP 635 +LGGIIIGDLLS G RGG GGW P Sbjct 617 MLGGIIIGDLLSSGMRGGFGGWSP 640 >gi|240170989|ref|ZP_04749648.1| hypothetical protein MkanA1_16883 [Mycobacterium kansasii ATCC 12478] Length=669 Score = 746 bits (1926), Expect = 0.0, Method: Compositional matrix adjust. Identities = 438/599 (74%), Positives = 510/599 (86%), Gaps = 5/599 (0%) Query 15 AAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWVVYVENF 74 A G+LL PP+ AQPPFRL YVTDNAGVL+ S R VT+A++ LYADR IRLWVVYV+NF Sbjct 19 AGGVLLAPPSAAQPPFRLPGYVTDNAGVLSGSDRAEVTSAINELYADRHIRLWVVYVDNF 78 Query 75 SGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVSEGQVDNVRRYQIEP 134 SGQSA+NW Q T R+SELG+YDALLAVAT R Y FLVPS +P VS GQV+ +RR QIEP Sbjct 79 SGQSAMNWGQSTFRSSELGSYDALLAVATVARSYVFLVPSTVPDVSAGQVEELRRNQIEP 138 Query 135 ALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLVVMRHRNRRRRADEL 194 AL GD+ GAAVAAANGLN+SPSSS RV LLV +G+IV+ V +LLVV R+R RRRRAD L Sbjct 139 ALRSGDWGGAAVAAANGLNKSPSSSGRVTLLVALGVIVVAVVILLVVTRYRARRRRADAL 198 Query 195 AAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELALAIEEFGERRTAPFT 254 AAARRVDPT+ ALAAVP LDDLSRSMVV VDNAVRTS+NELA+AI+EFG+ RTAPFT Sbjct 199 AAARRVDPTDQRALAAVPPDILDDLSRSMVVAVDNAVRTSSNELAVAIDEFGQERTAPFT 258 Query 255 QAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELASQTEAFEKLR 314 +AV+NAKAAL+QAF+VRQQLDD+ PETPAQRRELLTRVIVSAA ADREL +QTEAFE+LR Sbjct 259 RAVDNAKAALAQAFSVRQQLDDSVPETPAQRRELLTRVIVSAATADRELEAQTEAFEQLR 318 Query 315 DLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNVTTATERLAFA 374 DLVINAP+RLD+LTQQYVELTTRI P+QQRLAELH EF A+TS+AGNVT A ERL FA Sbjct 319 DLVINAPSRLDMLTQQYVELTTRIAPSQQRLAELHDEFGETALTSVAGNVTAAQERLVFA 378 Query 375 DRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSAATDIRHAVASLPAV 434 DRNI AR+L+ QAVSG Q+GLVDAVRAAESALGQAR+LLDAVDSAA DIRHAV LP+V Sbjct 379 DRNIGMARELSTQAVSGGQSGLVDAVRAAESALGQARSLLDAVDSAAGDIRHAVTELPSV 438 Query 435 VADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRAR-----GAADPLTAFDQ 489 +AD+ GIK+A++ LQ+ + T +L+AARDAAA+AL+ +R G ADPL F + Sbjct 439 LADVTAGIKQADEQLQKTPGSTSAHTRELVAARDAAAQALEESRNTRGTGVADPLGTFAR 498 Query 490 LTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRRGSIGPEART 549 ++K ADLDR+L T+A+EQA A+RLNRS EQALFTAESRVRAVS+YIDTRRGSIGPEART Sbjct 499 VSKAGADLDRVLTTVAQEQANAERLNRSFEQALFTAESRVRAVSDYIDTRRGSIGPEART 558 Query 550 RLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQRAYTRRGGNN 608 RLAEAKRQL AA D++S+N TEA+ +ANAASTLAA+AQ+LANADVQ+AQRAYTR+GG+N Sbjct 559 RLAEAKRQLHAARDKRSTNVTEAVGHANAASTLAANAQALANADVQAAQRAYTRQGGDN 617 >gi|118471886|ref|YP_888756.1| transmembrane protein [Mycobacterium smegmatis str. MC2 155] gi|118173173|gb|ABK74069.1| putative conserved transmembrane protein [Mycobacterium smegmatis str. MC2 155] Length=680 Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust. Identities = 380/632 (61%), Positives = 475/632 (76%), Gaps = 16/632 (2%) Query 1 MRLVRLLGMVLTILAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYA 60 MR+ RL ++L IL GLL+ P A A+PP RL+ +TD AG L++S +V A+DRLY Sbjct 1 MRIGRLFSLLLAILTTGLLVAPAAAAEPPLRLATQITDQAGALSASQAASVQRALDRLYD 60 Query 61 DRRIRLWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVS 120 DRRI+LWVV+VE+FSGQ+ + WAQ T R S+ G+ DALLAVAT R +AF VP + V Sbjct 61 DRRIKLWVVFVEDFSGQNYIGWAQNTMRLSDFGDDDALLAVATVDRAFAFQVPDTL--VD 118 Query 121 EGQVDNVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSS-----SRVVLLVTVGIIVIVV 175 + D++RR I P+L D++GAA+AAA+ LN P+S+ S LL+ +GII +++ Sbjct 119 TARADDIRRNSIGPSLRREDWAGAAIAAADQLNTEPASATGGGVSWPALLIVLGIIAVLI 178 Query 176 AVLLVVMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTST 235 +L + R R +RR E AA+RVDPT+ ALA+VPL+ALD LSR +VVDVDNAVRTS Sbjct 179 GILWIWSRRRRAKRRKAEFEAAKRVDPTDPDALASVPLEALDALSREIVVDVDNAVRTSQ 238 Query 236 NELALAIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVS 295 EL LA+EEFG +RT PFT AV NA+ AL+QAF VRQ LDD+ PETP Q+R+LLTRVIVS Sbjct 239 AELELAVEEFGAKRTEPFTTAVANARKALAQAFNVRQILDDDVPETPLQQRDLLTRVIVS 298 Query 296 AAHADRELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAA 355 AA ADREL +Q+ AFE+LRDLVINAPARLDL+TQQ V+L+ RI +QQ LA LHT+FDA Sbjct 299 AARADRELEAQSAAFEQLRDLVINAPARLDLMTQQMVDLSARIETSQQTLAALHTQFDAR 358 Query 356 AMTSIAGNVTTATERLAFADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLD 415 A+ S+AGNV TA ERLAFADRNI+ AR L + + Q GLVDAVRAAESAL QAR LLD Sbjct 359 ALESVAGNVDTARERLAFADRNITTARGLVSRPAAD-QTGLVDAVRAAESALSQARTLLD 417 Query 416 AVDSAATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALD 475 AVDSA+TDI A+A LPA VADI+ GI++AN L Q PQ + L ARDAA +A Sbjct 418 AVDSASTDINRALAGLPAAVADIEAGIEQANDLLAQPDTPQADK---LATARDAAVQAAG 474 Query 476 RAR--GAADPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVS 533 A+ G ADPL F +LT+ DADLD+LLAT+ E++ A+RL R+LEQA+FTAESR+ AVS Sbjct 475 EAKSNGTADPLGTFTRLTQADADLDQLLATVHEQREAAERLARTLEQAIFTAESRITAVS 534 Query 534 EYIDTRRGSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANAD 593 +YI+TRRGSIGPEARTRLAEA RQLEAA ++S+NP EA+A+AN ASTLAA AQSLAN D Sbjct 535 DYIETRRGSIGPEARTRLAEATRQLEAARAKRSTNPNEAVAHANGASTLAAQAQSLANDD 594 Query 594 VQSAQRAYTRR---GGNNAGAILGGIIIGDLL 622 V++AQR+YT GG + GA+LGGIIIG++L Sbjct 595 VRAAQRSYTSHHGGGGADMGAVLGGIIIGNVL 626 >gi|126436033|ref|YP_001071724.1| hypothetical protein Mjls_3455 [Mycobacterium sp. JLS] gi|126235833|gb|ABN99233.1| protein of unknown function DUF477 [Mycobacterium sp. JLS] Length=663 Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust. Identities = 378/603 (63%), Positives = 468/603 (78%), Gaps = 3/603 (0%) Query 1 MRLVRLLGMVLTILAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYA 60 MR+ RLL ++ T L AG+LL P A PPFRL YVTD AG L+++ R V AVDRLY Sbjct 1 MRMTRLLALLATFLTAGVLLAPVTAAAPPFRLPGYVTDQAGALSAAQRGEVQQAVDRLYN 60 Query 61 DRRIRLWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVS 120 +R+IRLWVV+VE+FSGQ A+NWA+ T R S+LG YDALLAVAT R YA VPS +P ++ Sbjct 61 ERKIRLWVVFVEDFSGQGAVNWARSTMRISDLGGYDALLAVATVDRAYALQVPSTVPDLT 120 Query 121 EGQVDNVRRYQIEPALHDGDYSGAAVAAANGLNRS--PSSSSRVVLLVTVGIIVIVVAVL 178 G+VD VRR Q+EPAL DGD++G A+AAA+GLN + P + LL +G+IV+ V VL Sbjct 121 AGKVDEVRRNQVEPALRDGDWAGGAIAAADGLNDAAAPRQIAWGGLLFALGVIVLAVFVL 180 Query 179 LVVMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNEL 238 V + R R+RRA E+ AR+VDP++ ALA+V L AL++LS+S+VV+VDNAVRTS+NEL Sbjct 181 WVWAQRRRRKRRAAEIERARQVDPSDPNALASVSLDALEELSKSIVVEVDNAVRTSSNEL 240 Query 239 ALAIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAH 298 ALA+EEFG +RT PFT+AV+ AK AL+QAFTVRQQLDD PETPAQRR+LLTRV+VSAA Sbjct 241 ALAVEEFGAKRTEPFTRAVDTAKQALAQAFTVRQQLDDAIPETPAQRRDLLTRVVVSAAK 300 Query 299 ADRELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMT 358 ADREL +QTEAFE+LR+LVINAP+RLD LTQ V++T RI P++Q+LA LHTEFDAAA+T Sbjct 301 ADRELDAQTEAFEQLRELVINAPSRLDGLTQSVVDITARIEPSRQKLATLHTEFDAAALT 360 Query 359 SIAGNVTTATERLAFADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVD 418 S+AGNV ATE L FAD NI+ R+LA + V+G+Q LVDAVRAAESAL QA +LLDAVD Sbjct 361 SVAGNVDAATELLMFADHNITRGRELAARPVAGQQTELVDAVRAAESALSQASSLLDAVD 420 Query 419 SAATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRAR 478 SAA+DIR A A LPAV+ DIQ+GI++A + L PQ + A AA ++ Sbjct 421 SAASDIRRAAAHLPAVIEDIQSGIRQAGELLAGGDVPQGAQLASARDAASAAVATAQQS- 479 Query 479 GAADPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDT 538 G+ DPL AF QLTK DADLDRLLAT+ EE+ ADRLNR+LE+ALF A SRVR+VS++IDT Sbjct 480 GSTDPLGAFTQLTKADADLDRLLATVEEEREAADRLNRALEEALFVARSRVRSVSDFIDT 539 Query 539 RRGSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQ 598 RRGSIGPEARTRLAEA RQ+ AA ++S+NP+EAIA+AN A+ LAA AQ LAN DVQ AQ Sbjct 540 RRGSIGPEARTRLAEAVRQISAADAKRSTNPSEAIAHANGAAMLAAQAQQLANNDVQYAQ 599 Query 599 RAY 601 +AY Sbjct 600 QAY 602 >gi|108800410|ref|YP_640607.1| hypothetical protein Mmcs_3444 [Mycobacterium sp. MCS] gi|108770829|gb|ABG09551.1| protein of unknown function DUF477 [Mycobacterium sp. MCS] Length=671 Score = 620 bits (1600), Expect = 2e-175, Method: Compositional matrix adjust. Identities = 360/574 (63%), Positives = 446/574 (78%), Gaps = 3/574 (0%) Query 30 FRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWVVYVENFSGQSALNWAQRTTRT 89 FRL YVTD AG L+++ R V AVDRLY +R+IRLWVV+VE+FSGQ A+NWA+ T R Sbjct 38 FRLPGYVTDQAGALSAAQRGEVQQAVDRLYNERKIRLWVVFVEDFSGQGAVNWARSTMRI 97 Query 90 SELGNYDALLAVATTGREYAFLVPSAMPGVSEGQVDNVRRYQIEPALHDGDYSGAAVAAA 149 S+LG YDALLAVAT R YA VPS +P ++ +VD VRR Q+EPAL GD++G A+AAA Sbjct 98 SDLGGYDALLAVATVDRAYALQVPSTVPDLTADKVDEVRRNQVEPALRGGDWAGGAIAAA 157 Query 150 NGLNRS--PSSSSRVVLLVTVGIIVIVVAVLLVVMRHRNRRRRADELAAARRVDPTNVMA 207 +GLN + P + LL +G+IV+ V VL V + R R+RRA E+ AR+VDP++ A Sbjct 158 DGLNDAAAPRQIAWGGLLFALGVIVLAVFVLWVWAQRRRRKRRAAEIERARQVDPSDPNA 217 Query 208 LAAVPLQALDDLSRSMVVDVDNAVRTSTNELALAIEEFGERRTAPFTQAVNNAKAALSQA 267 LA+V L AL++LS+S+VV+VDNAVRTS+NELALA+EEFG +RT PFT+AV+ AK AL+QA Sbjct 218 LASVSLDALEELSKSIVVEVDNAVRTSSNELALAVEEFGAKRTEPFTRAVDTAKQALAQA 277 Query 268 FTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELASQTEAFEKLRDLVINAPARLDLL 327 FTVRQQLDD PETP QRR+LLTRV+VSAA ADREL +QTEAFE+LR+LVINAP+RLD L Sbjct 278 FTVRQQLDDAIPETPTQRRDLLTRVVVSAAKADRELDAQTEAFEQLRELVINAPSRLDGL 337 Query 328 TQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNVTTATERLAFADRNISAARDLADQ 387 TQ V++T RI P++Q+LA LHTEFDAAA+TS+AGNV ATE L FAD NI+ R+LA + Sbjct 338 TQSVVDITARIEPSRQKLATLHTEFDAAALTSVAGNVDAATELLTFADHNITRGRELAAR 397 Query 388 AVSGRQAGLVDAVRAAESALGQARALLDAVDSAATDIRHAVASLPAVVADIQTGIKRANQ 447 V+G+Q LVDAVRAAESAL QA +LLDAVDSAA+DIR A A LPAV+ DIQ+GI++A + Sbjct 398 PVAGQQTELVDAVRAAESALSQASSLLDAVDSAASDIRRAAAHLPAVIEDIQSGIRQAGE 457 Query 448 HLQQAQQPQTGRTGDLIAARDAAARALDRARGAADPLTAFDQLTKVDADLDRLLATLAEE 507 L PQ + A AA ++ G+ DPL AF QLTK DADLDRLLAT+ EE Sbjct 458 LLAGGDVPQGAQLASARDAASAAVATAQQS-GSTDPLGAFTQLTKADADLDRLLATVEEE 516 Query 508 QATADRLNRSLEQALFTAESRVRAVSEYIDTRRGSIGPEARTRLAEAKRQLEAAHDRKSS 567 + ADRLNR+LE+ALF A SRVR+VS++IDTRRGSIGPEARTRLAEA RQ+ AA ++S+ Sbjct 517 REAADRLNRALEEALFVARSRVRSVSDFIDTRRGSIGPEARTRLAEAVRQISAADAKRST 576 Query 568 NPTEAIAYANAASTLAAHAQSLANADVQSAQRAY 601 NP+EAIA+AN A+ LAA AQ LAN DVQ AQ+AY Sbjct 577 NPSEAIAHANGAAMLAAQAQQLANNDVQYAQQAY 610 >gi|119869539|ref|YP_939491.1| hypothetical protein Mkms_3507 [Mycobacterium sp. KMS] gi|119695628|gb|ABL92701.1| protein of unknown function DUF477 [Mycobacterium sp. KMS] Length=663 Score = 620 bits (1600), Expect = 2e-175, Method: Compositional matrix adjust. Identities = 360/574 (63%), Positives = 446/574 (78%), Gaps = 3/574 (0%) Query 30 FRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWVVYVENFSGQSALNWAQRTTRT 89 FRL YVTD AG L+++ R V AVDRLY +R+IRLWVV+VE+FSGQ A+NWA+ T R Sbjct 30 FRLPGYVTDQAGALSAAQRGEVQQAVDRLYNERKIRLWVVFVEDFSGQGAVNWARSTMRI 89 Query 90 SELGNYDALLAVATTGREYAFLVPSAMPGVSEGQVDNVRRYQIEPALHDGDYSGAAVAAA 149 S+LG YDALLAVAT R YA VPS +P ++ +VD VRR Q+EPAL GD++G A+AAA Sbjct 90 SDLGGYDALLAVATVDRAYALQVPSTVPDLTADKVDEVRRNQVEPALRGGDWAGGAIAAA 149 Query 150 NGLNRS--PSSSSRVVLLVTVGIIVIVVAVLLVVMRHRNRRRRADELAAARRVDPTNVMA 207 +GLN + P + LL +G+IV+ V VL V + R R+RRA E+ AR+VDP++ A Sbjct 150 DGLNDAAAPRQIAWGGLLFALGVIVLAVFVLWVWAQRRRRKRRAAEIERARQVDPSDPNA 209 Query 208 LAAVPLQALDDLSRSMVVDVDNAVRTSTNELALAIEEFGERRTAPFTQAVNNAKAALSQA 267 LA+V L AL++LS+S+VV+VDNAVRTS+NELALA+EEFG +RT PFT+AV+ AK AL+QA Sbjct 210 LASVSLDALEELSKSIVVEVDNAVRTSSNELALAVEEFGAKRTEPFTRAVDTAKQALAQA 269 Query 268 FTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELASQTEAFEKLRDLVINAPARLDLL 327 FTVRQQLDD PETP QRR+LLTRV+VSAA ADREL +QTEAFE+LR+LVINAP+RLD L Sbjct 270 FTVRQQLDDAIPETPTQRRDLLTRVVVSAAKADRELDAQTEAFEQLRELVINAPSRLDGL 329 Query 328 TQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNVTTATERLAFADRNISAARDLADQ 387 TQ V++T RI P++Q+LA LHTEFDAAA+TS+AGNV ATE L FAD NI+ R+LA + Sbjct 330 TQSVVDITARIEPSRQKLATLHTEFDAAALTSVAGNVDAATELLTFADHNITRGRELAAR 389 Query 388 AVSGRQAGLVDAVRAAESALGQARALLDAVDSAATDIRHAVASLPAVVADIQTGIKRANQ 447 V+G+Q LVDAVRAAESAL QA +LLDAVDSAA+DIR A A LPAV+ DIQ+GI++A + Sbjct 390 PVAGQQTELVDAVRAAESALSQASSLLDAVDSAASDIRRAAAHLPAVIEDIQSGIRQAGE 449 Query 448 HLQQAQQPQTGRTGDLIAARDAAARALDRARGAADPLTAFDQLTKVDADLDRLLATLAEE 507 L PQ + A AA ++ G+ DPL AF QLTK DADLDRLLAT+ EE Sbjct 450 LLAGGDVPQGAQLASARDAASAAVATAQQS-GSTDPLGAFTQLTKADADLDRLLATVEEE 508 Query 508 QATADRLNRSLEQALFTAESRVRAVSEYIDTRRGSIGPEARTRLAEAKRQLEAAHDRKSS 567 + ADRLNR+LE+ALF A SRVR+VS++IDTRRGSIGPEARTRLAEA RQ+ AA ++S+ Sbjct 509 REAADRLNRALEEALFVARSRVRSVSDFIDTRRGSIGPEARTRLAEAVRQISAADAKRST 568 Query 568 NPTEAIAYANAASTLAAHAQSLANADVQSAQRAY 601 NP+EAIA+AN A+ LAA AQ LAN DVQ AQ+AY Sbjct 569 NPSEAIAHANGAAMLAAQAQQLANNDVQYAQQAY 602 >gi|120404774|ref|YP_954603.1| hypothetical protein Mvan_3816 [Mycobacterium vanbaalenii PYR-1] gi|119957592|gb|ABM14597.1| protein of unknown function DUF477 [Mycobacterium vanbaalenii PYR-1] Length=662 Score = 591 bits (1523), Expect = 2e-166, Method: Compositional matrix adjust. Identities = 357/634 (57%), Positives = 457/634 (73%), Gaps = 13/634 (2%) Query 1 MRLVRLLGMVLTILAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYA 60 MR+ RLL M+L +L GLL P A+PP RL Y+TDNAG L ++G V AA+DRLY Sbjct 4 MRVARLLPMLLAVLTLGLLCAPGVAAEPPLRLPTYLTDNAGALDTAGTAEVQAAIDRLYN 63 Query 61 DRRIRLWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVS 120 + RIRLWVV+V++FSGQ A W Q T S+LGN D +LAVAT R YA + P G Sbjct 64 EERIRLWVVFVDDFSGQDAQTWTQTTFARSDLGNQDVILAVATVDRAYALIAPKG--GAV 121 Query 121 EGQVDNVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLV 180 +D VR Q+EP L GD++GAAVAAA GL S S ++ V ++ + LV Sbjct 122 RVDIDKVRTQQVEPLLRTGDWAGAAVAAAEGLAGSGGGSVSWTGVLVVLAVIALALAALV 181 Query 181 VMRHRNRRRRAD-ELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELA 239 + + R RR+R + E AAA+RVDP++ ALAAVPL ALD+LSR +VVDVDN +RTS +ELA Sbjct 182 LWQRRRRRKRREAEFAAAQRVDPSDANALAAVPLDALDELSRKIVVDVDNELRTSESELA 241 Query 240 LAIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHA 299 LA+EEFGE+ TAPF++AV NA+ L+QA VRQ LDD PETP QRR+LLTRVIV+AA A Sbjct 242 LAVEEFGEQDTAPFSRAVANARTTLAQALNVRQILDDAVPETPMQRRDLLTRVIVAAAKA 301 Query 300 DRELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTS 359 DREL +Q EAF +LRDL+INAP+RLD LTQQ V+LT R+ P +Q L +L ++F A+ S Sbjct 302 DRELEAQREAFAQLRDLLINAPSRLDTLTQQMVDLTARLTPAEQTLEQLKSQFAETALVS 361 Query 360 IAGNVTTATERLAFADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDS 419 ++ N+ A +RLAFAD++I+ AR L + + RQ GLVDA+ AAE+ALGQAR LLDAVDS Sbjct 362 VSDNIDEARQRLAFADQSITTARGLVSRP-ADRQGGLVDAIHAAEAALGQARTLLDAVDS 420 Query 420 AATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRAR- 478 A+TDI AV LPAV+ADIQ GI +A L Q +L ARDAA +A+ +A+ Sbjct 421 ASTDINRAVTGLPAVIADIQNGINQAGAQLAQG---NVAVATELSTARDAAVQAVSQAQS 477 Query 479 -GAADPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYID 537 G +DPL AF +LT+ DADLDRLLA +AEE+ TA+RL+R+ +QALF A+SRVRAVS+YID Sbjct 478 TGNSDPLGAFTRLTQADADLDRLLAEVAEERETAERLSRTFDQALFNAQSRVRAVSDYID 537 Query 538 TRRGSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSA 597 TRRG+IGPEARTRLAEA RQL+AA D++ +N EAIA+AN A+ LAA AQSLAN+DV +A Sbjct 538 TRRGAIGPEARTRLAEAVRQLQAARDKRETNLNEAIAHANGAAMLAAQAQSLANSDVTAA 597 Query 598 QRAYT----RRGGNNAGAILGGIIIGDLLSGGTR 627 QR ++ GG GA++GGI+IG++LSG R Sbjct 598 QRHFSGPYGGGGGGQMGAVIGGILIGNVLSGALR 631 >gi|254774766|ref|ZP_05216282.1| hypothetical protein MaviaA2_08853 [Mycobacterium avium subsp. avium ATCC 25291] Length=606 Score = 577 bits (1486), Expect = 3e-162, Method: Compositional matrix adjust. Identities = 336/483 (70%), Positives = 394/483 (82%), Gaps = 3/483 (0%) Query 14 LAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWVVYVEN 73 L+AGLL PPAGAQPP RLS+Y+TD AGVL+ SGR A+T AVD+LY DR IRLWVVYV+ Sbjct 18 LSAGLL-APPAGAQPPLRLSDYLTDTAGVLSDSGRNAITTAVDKLYTDRHIRLWVVYVDT 76 Query 74 FSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVSEGQVDNVRRYQIE 133 FSGQ+A WAQ T RTS+LG+YDALLAVATT R YAFLVP + GV++ +V+ +R +IE Sbjct 77 FSGQTATRWAQDTLRTSDLGDYDALLAVATTDRAYAFLVPPTIRGVNQSRVEALRHNKIE 136 Query 134 PALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLVVMRHRNRRRRADE 193 PALHDGD+SGAAVAAA GL+ +P SS RV+LL T+ +++ V LL+VMR+R RRRRA Sbjct 137 PALHDGDWSGAAVAAATGLDTAPGSSGRVILLATLAALLVAVMALLLVMRYRGRRRRAAA 196 Query 194 LAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELALAIEEFGERRTAPF 253 LAAARR+DPT++ ALAA+PL LDDLSR++VVDVDNA+RTS NEL LA+ EFG++RT PF Sbjct 197 LAAARRLDPTDLDALAALPLPTLDDLSRALVVDVDNALRTSANELDLAVAEFGDQRTQPF 256 Query 254 TQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELASQTEAFEKL 313 TQAV NAKAALSQAFTVRQQLDD PETPAQRRELLT+VIVSAA ADREL SQTEAFE L Sbjct 257 TQAVTNAKAALSQAFTVRQQLDDGMPETPAQRRELLTQVIVSAARADRELESQTEAFEGL 316 Query 314 RDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNVTTATERLAF 373 RDLVINAP+RLD LTQQYVELT RIGP +Q+LA LH EF AAA+TS++GNVT A ERLAF Sbjct 317 RDLVINAPSRLDGLTQQYVELTARIGPAEQQLAALHNEFSAAALTSVSGNVTAAKERLAF 376 Query 374 ADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSAATDIRHAVASLPA 433 ADRNI AR+LA QAVSG+Q LVDAVRAAESALGQAR+LLDAVD AA DIRHA+ LP+ Sbjct 377 ADRNIGTARELAGQAVSGQQGRLVDAVRAAESALGQARSLLDAVDHAAGDIRHAIDQLPS 436 Query 434 VVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGAA--DPLTAFDQLT 491 +ADI+ IKRA + L + ++G L AARDAA RA++ AR +A DPL AF QLT Sbjct 437 AMADIENDIKRAAELLAATRDTKSGHAAKLAAARDAATRAVEGARASAPDDPLGAFGQLT 496 Query 492 KVD 494 K D Sbjct 497 KAD 499 >gi|145223307|ref|YP_001133985.1| hypothetical protein Mflv_2720 [Mycobacterium gilvum PYR-GCK] gi|315443767|ref|YP_004076646.1| hypothetical protein Mspyr1_21570 [Mycobacterium sp. Spyr1] gi|145215793|gb|ABP45197.1| protein of unknown function DUF477 [Mycobacterium gilvum PYR-GCK] gi|315262070|gb|ADT98811.1| protein of unknown function (DUF477) [Mycobacterium sp. Spyr1] Length=661 Score = 570 bits (1468), Expect = 4e-160, Method: Compositional matrix adjust. Identities = 345/614 (57%), Positives = 435/614 (71%), Gaps = 14/614 (2%) Query 22 PPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWVVYVENFSGQSALN 81 P A A+PP RL Y+TD AG L ++G + V A+D+LY D+RIRLWVVYVE+FSGQSA Sbjct 22 PAASAEPPLRLPTYLTDRAGALDAAGESEVQTAIDQLYDDKRIRLWVVYVEDFSGQSAQT 81 Query 82 WAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVSEGQVDNVRRYQIEPALHDGDY 141 WAQ T S+LG+ D +LAVAT R YA + P G +D VR Q+EP L GD+ Sbjct 82 WAQTTFTRSDLGDQDVILAVATVDRAYALITPRG--GAVRADIDEVRTQQVEPRLRAGDW 139 Query 142 SGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLVVMRHRNRRRRAD-ELAAARRV 200 +GAAVAAA GL S S ++ ++ + +LV+ + R RR+R + E AAA+RV Sbjct 140 AGAAVAAAQGLAGSGGGSVSWFGVIVALALIALALTILVLWQRRRRRKRREAEFAAAQRV 199 Query 201 DPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELALAIEEFGERRTAPFTQAVNNA 260 DP++ ALAAVPL ALDDLSR +VVDVDN VRTS +ELALA+EEFG + TA FT+AV A Sbjct 200 DPSDPEALAAVPLDALDDLSRKIVVDVDNEVRTSESELALAVEEFGAQDTAAFTRAVEGA 259 Query 261 KAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELASQTEAFEKLRDLVINA 320 K L+QA VR LDD PETP QRR+LLTRVIV+AA AD+EL +Q EAF LRDLVINA Sbjct 260 KTTLAQALNVRHILDDAVPETPMQRRDLLTRVIVAAAKADQELEAQREAFAALRDLVINA 319 Query 321 PARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNVTTATERLAFADRNISA 380 P+RLD LTQQ ++LTTRI P +Q L +L ++F A+A+ S++ N+ A RLA+AD++I+ Sbjct 320 PSRLDTLTQQMIDLTTRITPAEQTLQQLKSQFAASALVSVSDNIDEARSRLAYADQSITT 379 Query 381 ARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSAATDIRHAVASLPAVVADIQT 440 AR L + + RQ GLVDA+ +AE+ALGQAR LLDAVDSA+TDI AV LPAV+ADIQ Sbjct 380 ARTLVSRP-AHRQGGLVDAIHSAEAALGQARTLLDAVDSASTDINRAVTGLPAVIADIQN 438 Query 441 GIKRANQHLQQAQQPQTGRTGDLIAARD--AAARALDRARGAADPLTAFDQLTKVDADLD 498 GI A L Q +L ARD A A ++ G DPL AF +LT+ DADLD Sbjct 439 GINSAGAQLAQG---SVAVATELSDARDAAVQAVAEAQSSGETDPLGAFTRLTQADADLD 495 Query 499 RLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRRGSIGPEARTRLAEAKRQL 558 RLLA +AEE+ TA RL+R+ +QALF A+SRVRAVS+YIDTRRG+IGPEARTRLAEA RQL Sbjct 496 RLLAEVAEERETAARLSRTFDQALFNAQSRVRAVSDYIDTRRGAIGPEARTRLAEAVRQL 555 Query 559 EAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQRAYT-----RRGGNNAGAIL 613 +AA D++ +N EAIA+AN A+ LAA AQSLAN+DV +AQR + GG GA++ Sbjct 556 QAARDKQDTNLNEAIAHANGAAMLAAQAQSLANSDVTAAQRHFNGPYGGGGGGGQMGAVI 615 Query 614 GGIIIGDLLSGGTR 627 GGI+IG++LSG R Sbjct 616 GGILIGNVLSGVLR 629 >gi|41408231|ref|NP_961067.1| hypothetical protein MAP2133 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396586|gb|AAS04450.1| hypothetical protein MAP_2133 [Mycobacterium avium subsp. paratuberculosis K-10] Length=494 Score = 569 bits (1467), Expect = 5e-160, Method: Compositional matrix adjust. Identities = 331/476 (70%), Positives = 389/476 (82%), Gaps = 3/476 (0%) Query 14 LAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWVVYVEN 73 L+AGLL PPAGAQPP RLS+Y+TD AGVL+ SGR A+T AVD+LY DR IRLWVVYV+ Sbjct 18 LSAGLL-APPAGAQPPLRLSDYLTDTAGVLSDSGRKAITTAVDKLYTDRHIRLWVVYVDT 76 Query 74 FSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVSEGQVDNVRRYQIE 133 FSGQ+A WAQ T RTS+LG+YDALLAVATT R YAFLVP + GV++ +V+ +R +IE Sbjct 77 FSGQTATRWAQDTLRTSDLGDYDALLAVATTDRAYAFLVPPTIRGVNQSRVEALRHNKIE 136 Query 134 PALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLVVMRHRNRRRRADE 193 PALHDGD+SGAAVAAA GL+ +P SS RV+LL T+ +++ V LL+VMR+R RRRRA Sbjct 137 PALHDGDWSGAAVAAATGLDTAPGSSGRVILLATLAALLVAVMALLLVMRYRGRRRRAAA 196 Query 194 LAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELALAIEEFGERRTAPF 253 LAAARR+DPT++ ALAA+PL LDDLSR++VVDVDNA+RTS NEL LA+ EFG++RT PF Sbjct 197 LAAARRLDPTDLDALAALPLPTLDDLSRALVVDVDNALRTSANELDLAVAEFGDQRTQPF 256 Query 254 TQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELASQTEAFEKL 313 TQAV NAKAALSQAFTVRQQLDD PETPAQRRELLT+VIVSAA ADREL SQTEAFE L Sbjct 257 TQAVTNAKAALSQAFTVRQQLDDGMPETPAQRRELLTQVIVSAARADRELESQTEAFESL 316 Query 314 RDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNVTTATERLAF 373 RDLVINAP+RLD LTQQYVELT RIGP +Q+LA LH EF AAA+TS++GNVT A ERLAF Sbjct 317 RDLVINAPSRLDGLTQQYVELTARIGPAEQQLAALHNEFSAAALTSVSGNVTAAKERLAF 376 Query 374 ADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSAATDIRHAVASLPA 433 ADRNI AR+LA QAVSG+Q LVDAVRAAESALGQAR+LLDAVD AA DIRHA+ LP+ Sbjct 377 ADRNIGTARELAGQAVSGQQGRLVDAVRAAESALGQARSLLDAVDHAAGDIRHAIDQLPS 436 Query 434 VVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGAA--DPLTAF 487 +ADI+ IKRA + L + ++G +L AARDAA RA++ AR A DPL AF Sbjct 437 AMADIENDIKRAAELLAATRDTKSGHAAELAAARDAATRAVEGARAGAPDDPLGAF 492 >gi|169628796|ref|YP_001702445.1| hypothetical protein MAB_1706c [Mycobacterium abscessus ATCC 19977] gi|169240763|emb|CAM61791.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=671 Score = 516 bits (1330), Expect = 4e-144, Method: Compositional matrix adjust. Identities = 309/630 (50%), Positives = 412/630 (66%), Gaps = 17/630 (2%) Query 9 MVLTILAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWV 68 +++ + A LLL P A A PPFR+ YVTD AG L + + V AAVD+LY + +RLWV Sbjct 13 VLIAVCAPTLLLAPVASADPPFRIPGYVTDRAGALKNPAK--VRAAVDQLYDQQHVRLWV 70 Query 69 VYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVSEGQVDNVR 128 VYV++F G WA +T + S LG+ DALLAVAT R YAF V S + VS+ +++N+R Sbjct 71 VYVKDFEGTDPTAWADKTIKASNLGDRDALLAVATEERSYAFQVASGIKNVSDSEIENLR 130 Query 129 RYQIEPALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIV---IVVAVLLVVMRHR 185 IEPAL D+ GAA+ A GL + SSS+ + +G + ++V ++ R Sbjct 131 TNTIEPALRTSDWDGAAIKTATGLESAASSSASIPWKPVLGALAFGAVLVGAFMLFSWFR 190 Query 186 NRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELALAIEEF 245 R RR E+ AA+ +DP++ ALA P+ ALD LS+S+VV+VDNAVRTS ELALA+EEF Sbjct 191 TRSRRRAEIEAAKGIDPSDAEALAKQPVTALDGLSKSIVVNVDNAVRTSEAELALAVEEF 250 Query 246 GERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELAS 305 G TAPF QAV++AK AL+QAF+VR+QLDD PETP ++R LL VI +AA ADR L Sbjct 251 GTESTAPFQQAVDSAKKALAQAFSVRKQLDDAIPETPLEQRRLLIDVITTAARADRTLED 310 Query 306 QTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNVT 365 Q+ AF+ LR+LVINAPA+LD LTQQ V +T R+ +++ L +L TEFDAAA+ SI NV Sbjct 311 QSSAFDALRNLVINAPAKLDTLTQQVVAVTARLPESERILGQLRTEFDAAALASIGDNVA 370 Query 366 TATERLAFADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSAATDIR 425 ATER+ FAD I+ R+LA +A+ G+Q LVDA+R AESAL QA ALLDA+D+AA +IR Sbjct 371 EATERVRFADSRITHGRELAARALEGQQMSLVDAIRGAESALTQANALLDAIDNAANNIR 430 Query 426 HAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGAADPLT 485 HA+ SL A +AD ++ I +A + +Q + P + A AA +R GA DPLT Sbjct 431 HAIDSLAASIADTKSDIAQAEEFQKQGRLPSSEELTKAHDAAVAAVADAERI-GATDPLT 489 Query 486 AFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRRGSIGP 545 AF L DA LD+LLA EE+A A+R R L+QAL A R+ AV++YI RG++G Sbjct 490 AFTHLAAADAQLDKLLAAAQEERAAAERRARVLDQALVAARQRLDAVNQYIGLHRGAVGA 549 Query 546 EARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQRAYTRR- 604 R L EA+R+L AA ++SNP++AI +AN A+ LA AQ A +VQSAQR Y Sbjct 550 RTRWNLDEAQRRLAAAEQSRASNPSDAILFANGAAELATQAQYSAQQEVQSAQRYYGNGY 609 Query 605 ---------GGNNAGAILGGIIIGDLLSGG 625 GN AGA++GGI+ G +LSGG Sbjct 610 GGYSVAGDVAGNVAGAVIGGILRG-MLSGG 638 >gi|333990212|ref|YP_004522826.1| transmembrane protein [Mycobacterium sp. JDM601] gi|333486180|gb|AEF35572.1| transmembrane protein [Mycobacterium sp. JDM601] Length=667 Score = 445 bits (1145), Expect = 1e-122, Method: Compositional matrix adjust. Identities = 273/429 (64%), Positives = 332/429 (78%), Gaps = 9/429 (2%) Query 200 VDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELALAIEEFGERRTAPFTQAVNN 259 VDPT+ ALAAVP+ ALD LSR VV+VDNAVRTS NEL LA++EFG+ RT PF QAV + Sbjct 202 VDPTDPNALAAVPVFALDALSREKVVEVDNAVRTSANELQLAVDEFGQERTRPFAQAVAS 261 Query 260 AKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELASQTEAFEKLRDLVIN 319 A AA+ AFTVRQQLDD+ PETPAQ+R+LLT VIV+AA ADREL +Q +FE+LRDLV+N Sbjct 262 ANAAMEHAFTVRQQLDDDIPETPAQQRDLLTGVIVTAAKADRELETQRASFEQLRDLVLN 321 Query 320 APARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNVTTATERLAFADRNIS 379 APARLD LT++ VELT RI ++Q L ELH EFDA A++S++GNV TA +R AFA+RNI+ Sbjct 322 APARLDDLTRRLVELTGRIPLSEQNLVELHREFDATALSSVSGNVKTAQDRAAFAERNIT 381 Query 380 AARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSAATDIRHAVASLPAVVADIQ 439 AR LAD+ V+G Q+ LVDAVRAAES LGQ RALLDAVD+AA DIRHAVA+LP + D + Sbjct 382 RARGLADRPVTGGQSELVDAVRAAESGLGQGRALLDAVDNAARDIRHAVATLPEAITDAE 441 Query 440 TGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGAADPLTAFDQLTKVDADLDR 499 GI +AN LQ+ P +L +ARD A RA+ AR + DPL AF LTK DADLDR Sbjct 442 AGIAQANAQLQRGAGPH---RSELTSARDTAVRAVAAARASGDPLGAFTALTKADADLDR 498 Query 500 LLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRRGSIGPEARTRLAEAKRQLE 559 LL T+AEE+A A+RL R+LEQALFTA SR+RAVS+YIDTRRGS+GPEARTRLAEA+R+LE Sbjct 499 LLDTVAEERAAAERLARTLEQALFTASSRIRAVSDYIDTRRGSVGPEARTRLAEARRRLE 558 Query 560 AAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQ------RAYTRRGGNNAGAIL 613 AA D +S++ AI+ AN A+TLAA AQSLA ADVQ+AQ G + GA+L Sbjct 559 AAQDTRSTDVAGAISQANGAATLAAAAQSLAKADVQAAQRAYYGRYGGGPGRGGDTGAML 618 Query 614 GGIIIGDLL 622 GGIIIG++L Sbjct 619 GGIIIGNIL 627 >gi|111018228|ref|YP_701200.1| sensory rhodopsin II transducer [Rhodococcus jostii RHA1] gi|110817758|gb|ABG93042.1| possible sensory rhodopsin II transducer [Rhodococcus jostii RHA1] Length=686 Score = 420 bits (1080), Expect = 4e-115, Method: Compositional matrix adjust. Identities = 282/622 (46%), Positives = 388/622 (63%), Gaps = 18/622 (2%) Query 10 VLTILAAGLLLGPP-AGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWV 68 +LT++A +L P A A PFRL +TD GVL + ++ V AA+D+LY + ++RLWV Sbjct 32 LLTLVA--ILFSPAIASADAPFRLPGQITDTVGVLDADQQSDVQAAIDQLYDEHKVRLWV 89 Query 69 VYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVSEGQVDNVR 128 VYV +F+G A WA +T + S LG+ DALLAVAT REYA + P + ++ + +++R Sbjct 90 VYVPDFNGLGAGPWADQTAQASSLGDRDALLAVATVDREYALIAPDGLSEITSDEAESIR 149 Query 129 RYQIEPALHDGDYSGAAVAAANG----LNRSPSSSSRVVLLVTVGIIVIVVAVLLVVMRH 184 +EPAL + D++G A+AAA G ++ S R +L+ ++V V+L + Sbjct 150 VDAVEPALREEDWAGGAIAAAGGLGDAMSPGEGMSVRTLLIGGGVVVVGAGGVVLYSRKK 209 Query 185 RNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELALAIEE 244 ++ R RA + AAR + P + AL A+PL LD+ ++ ++V+ D+A+RTS EL LA E Sbjct 210 KHDRIRAG-VEAARSISPEDTAALTALPLPTLDERAKEVLVETDDALRTSQEELDLARGE 268 Query 245 FGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELA 304 FGE+ TA FT A + AKA L+ AFTVRQ+LDD PETP Q+RE+L +I S ADREL Sbjct 269 FGEQATASFTAAFDTAKATLAAAFTVRQRLDDAIPETPQQQREMLIDIITSCGRADRELN 328 Query 305 SQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNV 364 + + F+ LRDL+INAP RLD LT+ V LT RI + Q LA L TEF AAA+ S+A NV Sbjct 329 ERVQEFDGLRDLLINAPDRLDALTRDMVALTVRIPDSTQTLATLQTEFPAAALASVAHNV 388 Query 365 TTATERLAFADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSAATDI 424 T A ERLAFA+R ++ RD A G+Q V A+R AE AL QAR LLDAVD AA DI Sbjct 389 TMAEERLAFAERAVADGRD-AIALPPGKQGPAVSAIRGAEGALEQARTLLDAVDHAAEDI 447 Query 425 RHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGAADPL 484 RHA+A+LPA + D++ GI + Q +Q AA AA A D DPL Sbjct 448 RHAIATLPAAITDVEAGIAASAQFTEQGGDRLASARAAAEAALAAARTAAD-----TDPL 502 Query 485 TAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRRGSIG 544 +F Q+ K DA+LD +LA E + A+R + LEQ L A+S+V A S++I TRRG++G Sbjct 503 GSFTQIVKADAELDAVLAEAQESRQQAERAQQRLEQDLVAAQSQVTAASDFIGTRRGAVG 562 Query 545 PEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADV---QSAQRAY 601 +ARTRL EA+R L A ++++ + A+ +A AA+ LAA A LA DV +S Q Sbjct 563 ADARTRLTEAQRHLAGAQQLRATDASRALQHAQAAAGLAADALRLAQNDVSRWESRQLPG 622 Query 602 TRRGGNNA-GAILGGIIIGDLL 622 GG NA GAILGGI+I +L Sbjct 623 PGSGGGNATGAILGGILIDSIL 644 >gi|325676982|ref|ZP_08156653.1| sensory rhodopsin II transducer [Rhodococcus equi ATCC 33707] gi|325552144|gb|EGD21835.1| sensory rhodopsin II transducer [Rhodococcus equi ATCC 33707] Length=646 Score = 415 bits (1066), Expect = 2e-113, Method: Compositional matrix adjust. Identities = 269/602 (45%), Positives = 381/602 (64%), Gaps = 15/602 (2%) Query 30 FRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWVVYVENFSGQSALNWAQRTTRT 89 RL +++TD AGVL + R V A+D LY + ++ LWVVY +F G S W Q+T + Sbjct 44 LRLPDHITDTAGVLDAGQRADVQNALDTLYDEHKVSLWVVYTADFDGLSREAWGQQTAKL 103 Query 90 SELGNYDALLAVATTGREYAFLVPSAMPGVSEGQVDNVRRYQIEPALHDGDYSGAAVAAA 149 S LGN DALLAVAT +Y F VP A+ V++ +++++R+ ++PAL + D++GAA+AAA Sbjct 104 SALGNRDALLAVATNAGDYDFDVPQALSEVTDSELESIRQDLVQPALREDDWAGAAIAAA 163 Query 150 NGLNRSPSSSSRVVLLVTVGIIVIVVAVLLVVMRHRNRR--RRADELAAARRVDPTNVMA 207 GL + ++++ + ++ VGI V+VVA V + R +R R +A AR+VDPT+ A Sbjct 164 GGLGDAMTATNTSLKVLGVGIGVVVVAGAGVYLYSRKKRGDRLESSIAQARQVDPTDAAA 223 Query 208 LAAVPLQALDDLSRSMVVDVDNAVRTSTNELALAIEEFGERRTAPFTQAVNNAKAALSQA 267 L+A+P+ ALD L++ +V++DNA+RTS EL LA+ EFG TAPFT A + AKA L+ A Sbjct 224 LSALPIPALDALAKDELVEMDNAIRTSEEELNLAVGEFGADATAPFTAAYDRAKATLASA 283 Query 268 FTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELASQTEAFEKLRDLVINAPARLDLL 327 F +RQ+LDD+ PETP Q+R++L +I + ADREL ++ F+ +RDL+++APARLD L Sbjct 284 FAIRQRLDDDIPETPEQQRQMLVELITTCERADRELNARVTEFDAMRDLLLDAPARLDAL 343 Query 328 TQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNVTTATERLAFADRNISAARDLADQ 387 TQ V LT RI + LA L +F A+ + ++ N A ER+ FA++NI A R A Sbjct 344 TQAVVALTVRIPEAEATLAALGGQFPASVLATVHDNPAMARERITFAEQNIEAGRKAA-T 402 Query 388 AVSGRQAGLVDAVRAAESALGQARALLDAVDSAATDIRHAVASLPAVVADIQTGIKRANQ 447 +G+Q V A+RAAE AL QAR LLDAVD A TDIRHA+A+LPA +AD+Q GI A Sbjct 403 LPAGKQGPAVVAIRAAEGALDQARQLLDAVDRADTDIRHAIATLPAAMADVQEGIDAAGP 462 Query 448 HLQQAQQPQTGRTGDLIAARDAAARALDRARGAADPLTAFDQLTKVDADLDRLLATLAEE 507 ++ AA A A D DPL +F ++ + DA LD +LA E Sbjct 463 LAEKGGPELAEAKAAAEAALHNAQSAKD-----TDPLGSFTKVVEADARLDAVLAQAQEA 517 Query 508 QATADRLNRSLEQALFTAESRVRAVSEYIDTRRGSIGPEARTRLAEAKRQLEAAHDRKSS 567 A+R L+Q L A+S+V A +++I TRRG++G EARTRL+EA+R LEAA S Sbjct 518 NRQAERARARLDQDLTAAKSQVSAAADFISTRRGAVGAEARTRLSEAQRHLEAAQQLAES 577 Query 568 NPTEAIAYANAASTLAAHAQSLANADV---QSAQR----AYTRRGGNNAGAILGGIIIGD 620 +P++A+ +A +A+ LA+ A A ADV Q QR T GGN AGAILGGI+I Sbjct 578 DPSKALQHAQSATQLASRALWAAQADVNRYQDNQRPPSSGVTGSGGNAAGAILGGILIDS 637 Query 621 LL 622 +L Sbjct 638 ML 639 >gi|226360353|ref|YP_002778131.1| hypothetical protein ROP_09390 [Rhodococcus opacus B4] gi|226238838|dbj|BAH49186.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=687 Score = 413 bits (1061), Expect = 7e-113, Method: Compositional matrix adjust. Identities = 284/622 (46%), Positives = 386/622 (63%), Gaps = 18/622 (2%) Query 10 VLTILAAGLLLGPP-AGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWV 68 +LT++A +L P A A PFRL +TD GVL + ++ V AA+D+LY + ++RLWV Sbjct 34 LLTLVA--ILFSPAIASADAPFRLPGQITDTVGVLDADQQSDVQAAIDQLYDEHKVRLWV 91 Query 69 VYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVSEGQVDNVR 128 VYV +F+G A WA +T + S LG+ DALLAVAT REYA + P + ++ + +++R Sbjct 92 VYVPDFNGLGAGPWADQTAQASSLGDRDALLAVATVDREYALIAPDGLSEITADEAESIR 151 Query 129 RYQIEPALHDGDYSGAAVAAANGLNRSPSS----SSRVVLLVTVGIIVIVVAVLLVVMRH 184 +EPAL + D++G A+AAA GL + S S R +L+ ++V V V+L + Sbjct 152 VDAVEPALREEDWAGGAIAAAGGLGDAMSPGGGMSVRTLLVGGGVVVVGVGGVVLYSRKK 211 Query 185 RNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELALAIEE 244 + R RA + AAR + P + AL A+PL LD+ ++ ++V+ D+A+RTS EL LA E Sbjct 212 KQDRTRAG-VEAARSISPEDTAALTALPLPTLDERAKEVLVETDDALRTSQEELDLARGE 270 Query 245 FGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELA 304 FGE+ TA FT A AK+ L+ AFTVRQ+LDD PETP QRRE+L +I S ADREL Sbjct 271 FGEQATAAFTTAFETAKSTLAAAFTVRQRLDDAIPETPQQRREMLIDIITSCGRADRELN 330 Query 305 SQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNV 364 + + F+ LRDL+INAP RLD LT+ V LT RI + Q LA L TEF AAA+ S+A NV Sbjct 331 EKVQEFDGLRDLLINAPDRLDALTRDMVALTVRIPDSTQTLATLQTEFPAAALASVAHNV 390 Query 365 TTATERLAFADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSAATDI 424 T A ERLA+A++ ++ RD A G+Q V A+R AE AL QAR LLDAVD AA +I Sbjct 391 TMAEERLAYAEKAVAEGRD-AVALPPGKQGPAVSAIRGAEGALEQARILLDAVDHAAENI 449 Query 425 RHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGAADPL 484 RHA+A+LPA + D++ GI A Q Q G AA A R DPL Sbjct 450 RHAIATLPAAITDVEAGIAAAAQFTGQG-----GDRLAAARTAAEAALAAARTAADTDPL 504 Query 485 TAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRRGSIG 544 +F Q+ K DA+LD +LA E + A+R + LEQ L A+S+V A ++I TRRG++G Sbjct 505 GSFTQIVKADAELDAVLAEAQESRQQAERAQQRLEQDLVAAQSQVTAAGDFIGTRRGAVG 564 Query 545 PEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADV---QSAQRAY 601 EARTRL EA+R L A +S++ + A+ +A AA+ LAA A LA DV +S QR Sbjct 565 AEARTRLTEAQRHLAGAQQLRSTDASRALRHAQAAAGLAADALRLAQNDVSSWESRQRPG 624 Query 602 TRRGGNNA-GAILGGIIIGDLL 622 GG NA GAILGGI+I +L Sbjct 625 PGGGGGNATGAILGGILIDSIL 646 >gi|312140271|ref|YP_004007607.1| membrane protein [Rhodococcus equi 103S] gi|311889610|emb|CBH48927.1| putative membrane protein [Rhodococcus equi 103S] Length=652 Score = 412 bits (1059), Expect = 9e-113, Method: Compositional matrix adjust. Identities = 267/602 (45%), Positives = 381/602 (64%), Gaps = 15/602 (2%) Query 30 FRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWVVYVENFSGQSALNWAQRTTRT 89 RL +++TD AGVL + R V A+D LY + ++ LWVVY +F G S W Q+T + Sbjct 13 LRLPDHITDTAGVLDAGQRADVQNALDTLYDEHKVSLWVVYTADFDGLSREAWGQQTAKL 72 Query 90 SELGNYDALLAVATTGREYAFLVPSAMPGVSEGQVDNVRRYQIEPALHDGDYSGAAVAAA 149 S LGN DALLAVAT +Y F VP A+ V++ +++++R+ ++PAL + D++GAA+AAA Sbjct 73 SALGNRDALLAVATNAGDYDFDVPQALSEVTDSELESIRQDLVQPALREDDWAGAAIAAA 132 Query 150 NGLNRSPSSSSRVVLLVTVGIIVIVVAVLLVVMRHRNRR--RRADELAAARRVDPTNVMA 207 GL + ++++ + ++ VGI V+VVA V + R +R R +A AR+VDPT+ A Sbjct 133 GGLGDAMTATNTSLKVLGVGIGVVVVAGAGVYLYSRKKRGDRLESSIAQARQVDPTDAAA 192 Query 208 LAAVPLQALDDLSRSMVVDVDNAVRTSTNELALAIEEFGERRTAPFTQAVNNAKAALSQA 267 L+A+P+ ALD L++ +V++DNA+RTS EL LA+ EFG TAPFT A + AKA L+ A Sbjct 193 LSALPIPALDALAKDELVEMDNAIRTSEEELNLAVGEFGADATAPFTAAYDRAKATLASA 252 Query 268 FTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELASQTEAFEKLRDLVINAPARLDLL 327 F +RQ+LDD+ PETP Q+R++L +I + ADREL ++ F+ +RDL+++APARLD L Sbjct 253 FAIRQRLDDDIPETPEQQRQMLVELITTCERADRELNARVTEFDAMRDLLLDAPARLDAL 312 Query 328 TQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNVTTATERLAFADRNISAARDLADQ 387 TQ V LT RI + LA L +F A+ + ++ N A ER+ FA++NI A R A Sbjct 313 TQAVVALTVRIPEAEATLAALGGQFPASVLATVHDNPAMARERITFAEQNIEAGRKAA-T 371 Query 388 AVSGRQAGLVDAVRAAESALGQARALLDAVDSAATDIRHAVASLPAVVADIQTGIKRANQ 447 +G+Q V A+RAAE AL QAR LLDAVD A TDIRHA+++LPA +AD+Q GI A Sbjct 372 LPAGKQGPAVVAIRAAEGALDQARQLLDAVDRADTDIRHAISTLPAAMADVQEGIDAAGP 431 Query 448 HLQQAQQPQTGRTGDLIAARDAAARALDRARGAADPLTAFDQLTKVDADLDRLLATLAEE 507 ++ AA A A D DPL +F ++ + DA LD +LA E Sbjct 432 LAEKGGPELAEAKAAAEAALQNAQSAKD-----TDPLGSFTKVVEADARLDAVLAQAQEA 486 Query 508 QATADRLNRSLEQALFTAESRVRAVSEYIDTRRGSIGPEARTRLAEAKRQLEAAHDRKSS 567 A+R L+Q L A+S+V A +++I TRRG++G EARTR++EA+R LEAA S Sbjct 487 NRQAERARARLDQDLTAAKSQVSAAADFISTRRGAVGAEARTRVSEAQRHLEAAQQLAES 546 Query 568 NPTEAIAYANAASTLAAHAQSLANADV---QSAQR----AYTRRGGNNAGAILGGIIIGD 620 +P++A+ +A +A+ LA+ A A ADV Q QR T GGN AGAILGGI+I Sbjct 547 DPSKALQHAQSATQLASRALWAAQADVNRYQDNQRPPSGGVTGSGGNAAGAILGGILIDS 606 Query 621 LL 622 +L Sbjct 607 ML 608 >gi|229490311|ref|ZP_04384153.1| putative conserved transmembrane protein [Rhodococcus erythropolis SK121] gi|229322843|gb|EEN88622.1| putative conserved transmembrane protein [Rhodococcus erythropolis SK121] Length=663 Score = 404 bits (1038), Expect = 3e-110, Method: Compositional matrix adjust. Identities = 247/604 (41%), Positives = 370/604 (62%), Gaps = 11/604 (1%) Query 24 AGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWVVYVENFSGQSALNWA 83 A A P L N++TD +GVL S R+ + AA+D+L D +I LWV +V +F+ WA Sbjct 48 ASADAPMVLPNHITDTSGVLDSGQRSDIQAAIDQLGEDHQIDLWVAFVPDFNNLGGQAWA 107 Query 84 QRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVSEGQVDNVRRYQIEPALHDGDYSG 143 Q+T S L LLAVAT R Y VP+ + +++ ++++ +EPAL + D++G Sbjct 108 QQTATKSTLSTKSVLLAVATAERAYYLDVPAELSNITDSDIESINTDAVEPALAEDDWTG 167 Query 144 AAVAAANGLNRSPSSSSRV---VLLVTVGIIVIVVAVLLVVMRHRNRRRRADELAAARRV 200 AA+AAA L + ++S + LL+ G +V+ +++ R R + + AA+ + Sbjct 168 AAIAAAGALGDANNTSGGMGVGTLLIAGGAVVVGTGGVVLYSRKRKNDKNKASVEAAKNI 227 Query 201 DPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELALAIEEFGERRTAPFTQAVNNA 260 P ++ +L A+PL LD+ ++ ++V+ DNA+ S EL LA EFG+ APF+ A + A Sbjct 228 SPDDIASLNALPLPTLDERAKEILVETDNAIAGSQEELDLARSEFGDSAVAPFSAAFDKA 287 Query 261 KAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELASQTEAFEKLRDLVINA 320 KA L++AF +RQ+LDD PETP QRR++L +I S AD+EL ++ E F+ LRDL+INA Sbjct 288 KATLAEAFAIRQRLDDAIPETPDQRRQMLIDIISSCGRADQELEARVEEFDGLRDLLINA 347 Query 321 PARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNVTTATERLAFADRNISA 380 PARLD LTQ V L+ R+ ++ L +L +F A + S+ NVT A+ERL A+++I Sbjct 348 PARLDALTQSVVSLSVRLPESEAILTKLKDQFPAPTLASVVNNVTMASERLTLAEKSIEE 407 Query 381 ARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSAATDIRHAVASLPAVVADIQT 440 RD A +G+Q V A+R AE+AL QAR LLD VD AA DIR+A+A+LP+ + D+Q Sbjct 408 GRD-ATALPAGKQGAAVTAIRTAEAALDQARKLLDGVDHAADDIRNAIATLPSAMDDVQQ 466 Query 441 GIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGAADPLTAFDQLTKVDADLDRL 500 GI A+ +L Q G+ A AA A + +DPLTAF+Q+ DA LD L Sbjct 467 GITAADAYLAQG-----GQKLADAKAAAQAALANAQTSKDSDPLTAFNQIVAADAQLDAL 521 Query 501 LATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRRGSIGPEARTRLAEAKRQLEA 560 LA E++ +R + L Q + A+++V A +++ TRRG+IG EARTR AEA+R L+A Sbjct 522 LADAQEQKQQLERAQQRLAQDILAAQAQVTAAGDFLGTRRGAIGAEARTRYAEAQRHLQA 581 Query 561 AHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQRAYTRR--GGNNAGAILGGIII 618 A ++S+P++A+ +A AA+TLA H+ A DV + + R GG+ GAILGGI+I Sbjct 582 AQQLQASDPSKALQHAQAATTLATHSLRAAQNDVDTWEANQRPRGGGGDATGAILGGILI 641 Query 619 GDLL 622 +L Sbjct 642 NSIL 645 >gi|226307189|ref|YP_002767149.1| hypothetical protein RER_37020 [Rhodococcus erythropolis PR4] gi|226186306|dbj|BAH34410.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=688 Score = 404 bits (1038), Expect = 3e-110, Method: Compositional matrix adjust. Identities = 246/604 (41%), Positives = 371/604 (62%), Gaps = 11/604 (1%) Query 24 AGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWVVYVENFSGQSALNWA 83 A A P L N++TD +GVL + R+ + AA+D+L D +I LWV +V +F+ WA Sbjct 48 ASADAPMVLPNHITDTSGVLDAGQRSDIQAAIDQLSEDHQIDLWVAFVPDFNNLGGQAWA 107 Query 84 QRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVSEGQVDNVRRYQIEPALHDGDYSG 143 Q+T S L LLAVAT R Y VP+ + +++ ++++ +EPAL + D++G Sbjct 108 QQTATKSTLSTKSVLLAVATAERAYYLDVPAELSNITDSDIESINSDAVEPALAEDDWTG 167 Query 144 AAVAAANGLNRSPSSSSRV---VLLVTVGIIVIVVAVLLVVMRHRNRRRRADELAAARRV 200 AA+AAA L + ++S + LL+ G +V+ +++ R R + + AA+ + Sbjct 168 AAIAAAGALGDANNTSGGMGVGTLLIAGGAVVVGTGGVVLYSRKRKNDKNKASVEAAKNI 227 Query 201 DPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELALAIEEFGERRTAPFTQAVNNA 260 P ++ +L A+PL LD+ ++ ++V+ DNA+ S EL LA EFG+ APF+ A + A Sbjct 228 SPDDIASLNALPLPTLDERAKEILVETDNAIAGSQEELDLARSEFGDSAVAPFSAAFDKA 287 Query 261 KAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELASQTEAFEKLRDLVINA 320 KA L++AF +RQ+LDD PETP QRR++L +I S AD+EL ++ E F+ LRDL+INA Sbjct 288 KATLAEAFAIRQRLDDAIPETPDQRRQMLIDIISSCGRADQELEARVEEFDGLRDLLINA 347 Query 321 PARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNVTTATERLAFADRNISA 380 PARLD+LTQ V L+ R+ ++ L +L +F A + S+ NVT A+ERL A+++I Sbjct 348 PARLDVLTQSVVSLSVRLPESEAILTKLKDQFPAPTLASVVNNVTMASERLTLAEKSIEE 407 Query 381 ARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSAATDIRHAVASLPAVVADIQT 440 RD A +G+Q V A+R AE+AL QAR LLD VD AA DIR+A+A+LP+ + D+Q Sbjct 408 GRD-ATALPAGKQGAAVTAIRTAEAALDQARKLLDGVDHAADDIRNAIATLPSAMDDVQQ 466 Query 441 GIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGAADPLTAFDQLTKVDADLDRL 500 GI A+ +L Q G+ A AA A + +DPLTAF+Q+ DA LD L Sbjct 467 GITAADAYLAQG-----GQKLADAKAAAQAALANAQTSKDSDPLTAFNQIVAADAQLDAL 521 Query 501 LATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRRGSIGPEARTRLAEAKRQLEA 560 LA E++ +R + L Q + A+++V A +++ TRRG+IG EARTR AEA+R L+A Sbjct 522 LADAQEQKQQLERAQQRLAQDILAAQAQVTAAGDFLGTRRGAIGAEARTRYAEAQRHLQA 581 Query 561 AHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQRAYTRR--GGNNAGAILGGIII 618 A ++S+P++A+ +A AA+TLA H+ A DV + + R GG+ GAILGGI+I Sbjct 582 AQQLQASDPSKALQHAQAATTLATHSLRAAQNDVNTWEANQRPRGGGGDATGAILGGILI 641 Query 619 GDLL 622 +L Sbjct 642 NSIL 645 >gi|54023431|ref|YP_117673.1| hypothetical protein nfa14640 [Nocardia farcinica IFM 10152] gi|54014939|dbj|BAD56309.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=668 Score = 372 bits (955), Expect = 1e-100, Method: Compositional matrix adjust. Identities = 287/625 (46%), Positives = 381/625 (61%), Gaps = 19/625 (3%) Query 6 LLGMVLTILAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIR 65 ++G++L ILA L P A A+PP R+ YV D AGVL G V +AVDRLYAD RIR Sbjct 16 IVGLLLVILA--LTGAPGALAEPPTRMGTYVVDEAGVLDGDGAARVRSAVDRLYADHRIR 73 Query 66 LWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVSEGQVD 125 LWV YV +F G S WA RT S G D LLAVAT EY +L S GVS+G++D Sbjct 74 LWVYYVHDFGGASPEQWATRTAAVSGFGERDLLLAVATDAGEY-WLAGSVPGGVSDGELD 132 Query 126 NVRRYQIEPALHDGDYSGAAVAAANGLNRSPSS---SSRVVLLVTVGIIVIVVAVLLVVM 182 V ++EPAL D ++ AAVAAA+GL + S S R VL+ + ++ +V L++ Sbjct 133 TVLTDRVEPALRDSRWAEAAVAAADGLGAALSGGGISGRAVLIALL-VVAALVGGLVLWS 191 Query 183 RHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELALAI 242 R R R R A ELAAAR+VDPT+ ALAA+PL AL SR ++V++D+A+R S ELALA+ Sbjct 192 RKRRRDRVATELAAARQVDPTDSAALAALPLAALHARSREVLVEIDDAIRASAEELALAV 251 Query 243 EEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRE 302 EFGE PFT AV AKAA +AF +RQQLDD PETP ++R LL +I ADRE Sbjct 252 GEFGETAAMPFTTAVGEAKAAAGRAFRIRQQLDDAVPETPDEQRRLLIELITVVGRADRE 311 Query 303 LASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAG 362 L ++ F+ +RDL+I+AP RLD LT+ VELT R+ ++ L L A + IA Sbjct 312 LDARVAEFDAMRDLLIDAPGRLDGLTRDLVELTGRVPASEAELTRLAAAHPAGVLAPIAD 371 Query 363 NVTTATERLAFADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSAAT 422 NV A ER+AFA+ NI A R + V G Q V A+RAAESA+GQARALLDAVD+AA Sbjct 372 NVRMARERIAFAEENIDAGRAALARPV-GEQGPAVGAIRAAESAIGQARALLDAVDNAAA 430 Query 423 DIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAAR-ALDRARGAA 481 +I+ A LPA + +++ I A + G G +AA AAAR LD A A Sbjct 431 NIQQARDGLPAALDELRKDIAAATE--------LEGYGGAELAAATAAARQTLDAATAQA 482 Query 482 --DPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTR 539 DPL+AF DADLDR L + + A L R + A+ A++R+ A +++I TR Sbjct 483 DTDPLSAFHDAVAADADLDRALVAATDRKLAAADLRRRFDHAMTDAQARIGAAADFISTR 542 Query 540 RGSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQR 599 RG + ARTRL+EA+R L+AA +++P +A+ +A +A+ LA A A A V++ + Sbjct 543 RGGVDATARTRLSEAQRHLDAAQALAAADPAQALTHAQSAAGLAGRALQEAQASVRAFEA 602 Query 600 AYTRRGGNNAGAILGGIIIGDLLSG 624 + GG AGAILGGI++ LL G Sbjct 603 SRPPSGGAQAGAILGGILVEGLLRG 627 >gi|333918884|ref|YP_004492465.1| sensory rhodopsin II transducer [Amycolicicoccus subflavus DQS3-9A1] gi|333481105|gb|AEF39665.1| Sensory rhodopsin II transducer [Amycolicicoccus subflavus DQS3-9A1] Length=678 Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 248/624 (40%), Positives = 356/624 (58%), Gaps = 23/624 (3%) Query 13 ILAAGLLLGPPAG--AQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWVVY 70 + A LLLG PA A+PP RL + + DN G L++ + D LY ++RIRLWVVY Sbjct 2 FMLATLLLGAPAASVAEPPLRLDDRIVDNVGALSAGDIERIRPEFDELYDEQRIRLWVVY 61 Query 71 VENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVSEGQVDNVRRY 130 + F W T+ S G+ D LLAVA T R+Y +P++M VS + + R Sbjct 62 TDTFMDFDGQTWTDATSAISGFGDNDVLLAVAVTDRQYFLNLPNSMTAVSSSEERAILRD 121 Query 131 QIEPALHDGDYSGAAVAAANGLNRS--PSSSSRVVLLVTVGIIVIVVAVLLVVMRHRNRR 188 IEPAL + ++ AA+ AANGL R+ PS+SS V +L+ +G I +A L+V + R R Sbjct 122 DIEPALSEDLWADAAIGAANGLARAAAPSTSSPVPVLIVLGGIAGFIAFLVVRSKRRAAR 181 Query 189 RRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELALAIEEFGER 248 A +A+ +D T+ ALA VP ALD S++M+V+ D+A+RTS ELA A +EFG+ Sbjct 182 THARNVASLDNIDLTDRTALAQVPASALDTKSKAMLVETDDAIRTSGEELARARDEFGDS 241 Query 249 RTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELASQTE 308 + FTQA+ NAK AL +AF +RQ+LDD PETP QR ++L ++ + A ADREL +Q E Sbjct 242 SVSQFTQALTNAKRALGRAFEIRQRLDDAIPETPPQRHQMLVDLVATCATADRELDAQVE 301 Query 309 AFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNVTTAT 368 AF+ RDL+I+AP RLD LTQ V +T RI + L L +F + + +I N A Sbjct 302 AFDAKRDLLISAPERLDSLTQDVVAVTVRIPEAEGALESLRAQFAPSVLGAIEKNPALAK 361 Query 369 ERLAFADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSAATDIRHAV 428 + + A+ +IS AR ++ G A ++ ++RAAE+A+ QAR L++ V A DIR A+ Sbjct 362 DHVTLAEESISEARRALNR---GDSANVIASLRAAEAAVSQARELVEGVAHAEIDIRSAI 418 Query 429 ASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGA--ADPLTA 486 LP + D++ I+RA Q L A P+ L A R AA AL +AR A ++PL + Sbjct 419 TRLPEAMTDLEKDIERARQ-LANAGGPE------LNAVRAAAEEALMKARDARESNPLGS 471 Query 487 FDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRRGSIGPE 546 + + DA LD LLA E R+L L A++ + A ++I TRRG+IG E Sbjct 472 LHHIVEADAALDELLARAQEASEREQHARRTLANDLSAADAHITAARDFISTRRGAIGAE 531 Query 547 ARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQRAYTRRGG 606 RTRL+EA+R A S+P A+ +A AA LA A S A ++V S + + R Sbjct 532 PRTRLSEAERHAGYARHIAHSDPVTALEHARAAVKLAQQALSYARSEVSSWE-SQQRTNF 590 Query 607 NNAGAILGG------IIIGDLLSG 624 N G GG +++G +L G Sbjct 591 ANVGQTGGGPGSMTNVVVGGMLGG 614 >gi|343928665|ref|ZP_08768110.1| hypothetical protein GOALK_120_00930 [Gordonia alkanivorans NBRC 16433] gi|343761414|dbj|GAA15036.1| hypothetical protein GOALK_120_00930 [Gordonia alkanivorans NBRC 16433] Length=655 Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 236/613 (39%), Positives = 337/613 (55%), Gaps = 12/613 (1%) Query 18 LLLGPPAG---AQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWVVYVENF 74 LLL AG A+PP RL YV D+A V+T RT + AVD LY + I++W+VYV +F Sbjct 3 LLLSVGAGTAAAEPPTRLPTYVVDSAEVITPEQRTELENAVDDLYNEHDIQMWIVYVRSF 62 Query 75 SGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVSEGQVDNVRRYQIEP 134 G ++ WA +T SELG++DALLAVAT R Y P ++ G+ + +D+V + P Sbjct 63 DGLTSEQWADQTAIASELGDHDALLAVATEDRAYRMFAPDSIGGLDQSTLDDVATNDVVP 122 Query 135 ALHDGDYSGAAVAAANGL-NRSPSSSSRVVLLVTVGIIVIVVAVLLVVMRHRNRRRRADE 193 L +G+++ A + A NGL N S + V+ VG V++ + R ++RR D Sbjct 123 QLREGNWAQAGLGAINGLSNALDPSYTGVITAGVVGGAVVIGGGGAYLYSRRRKQRRIDG 182 Query 194 LAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELALAIEEFGERRTAPF 253 A R V LA PL LD SR ++ D+DNA+RTS EL LA++EFG TAPF Sbjct 183 SVEALREQELTVDQLAEQPLDVLDPWSREVLTDLDNAIRTSEEELRLAVDEFGPAETAPF 242 Query 254 TQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELASQTEAFEKL 313 T+A+ A+ L+Q+FT RQ+LDDN PET +RR +L +I S AD L Q EAF+ + Sbjct 243 TKALERARRGLAQSFTTRQRLDDNVPETDDERRGMLVEIITSCTEADAALDDQVEAFDAM 302 Query 314 RDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNVTTATERLAF 373 R+L+INA R D +TQQ + L R+ P Q+L EL + + SI NV A +++ F Sbjct 303 RNLLINADTRFDAITQQLIGLRARLDPATQQLTELTEKHGEQTLASILPNVELARQQIDF 362 Query 374 ADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSAATDIRHAVASLPA 433 A+ R A A G+Q V A+R+AE ++ QA LLDA+D A +I A + +PA Sbjct 363 AEATADQGR-AASAAPVGQQGPAVAAIRSAEGSIEQATVLLDAIDHADANIAAAQSRMPA 421 Query 434 VVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGAADPLTAFDQLTKV 493 ++ +++ + A A DAA D ADPL +F L Sbjct 422 LIEEVEGELAEAASLTADGGPALATAAAAARTALDAARTGFD-----ADPLGSFTALVDA 476 Query 494 DADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRRGSIGPEARTRLAE 553 DADLD L + A R + L AL +A ++V A S++I TRRG++ ARTRLAE Sbjct 477 DADLDDALDAARDSAAERTRRAQVLTAALESATAKVTAASDFIGTRRGAVQSTARTRLAE 536 Query 554 AKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQRAYTRR--GGNNAGA 611 A+R L +A + ++P A + A + LA A A DV + Q++ R G + AGA Sbjct 537 AQRLLRSAQEAAGTDPGAATSTARRSGALADQALMAAQGDVVNWQQSQQPRSGGSSTAGA 596 Query 612 ILGGIIIGDLLSG 624 +LGGI++ L G Sbjct 597 VLGGILVDSFLRG 609 >gi|326383872|ref|ZP_08205556.1| hypothetical protein SCNU_13093 [Gordonia neofelifaecis NRRL B-59395] gi|326197331|gb|EGD54521.1| hypothetical protein SCNU_13093 [Gordonia neofelifaecis NRRL B-59395] Length=679 Score = 313 bits (801), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 232/660 (36%), Positives = 358/660 (55%), Gaps = 37/660 (5%) Query 4 VRLLGMVLT---ILAAGLLLGPPAG-AQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLY 59 VRLL + L+ ++AA L+ G + AQ P R+++ + D AGV +S+ + A+DRLY Sbjct 12 VRLLMVTLSALAMVAASLVAGTGSTRAQAPLRMADQIVDTAGVFSSTDHDEIADAIDRLY 71 Query 60 ADRRIRLWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGV 119 DRRI++WVVYV++F G +A +WA++T SE G+ D LLAVAT + Y P A+ + Sbjct 72 NDRRIQMWVVYVDSFDGLTAADWARQTESLSEFGDRDVLLAVATRDKSYRLTTPEAIDEL 131 Query 120 SEGQVDNVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAV-- 177 ++ +++ + + P L ++ +A+ ++ + ++ + +G+IV+++ + Sbjct 132 TQDEINAIATDTLVPDLKRSAWAASALDTVTAVDDASATDDSHTAAIIMGVIVVLLVLGG 191 Query 178 ----LLVVMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRT 233 L R + D+L + D V L+ PL L SR ++ D DNAV+T Sbjct 192 GAFAFLRRRRRTEQAEAVDDLRESS--DSLTVDQLSEQPLDVLHAWSREVLTDTDNAVKT 249 Query 234 STNELALAIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVI 293 S +EL LAI+EFG+ APFT A+ A+ L+ +F +RQ+LDD ETP ++R +L ++I Sbjct 250 SADELQLAIDEFGDADAAPFTAALAAAQRVLASSFALRQRLDDKVAETPDEQRSMLVQII 309 Query 294 VSAAHADRELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFD 353 + + AD L Q E F+ +R+L+INA RLD LT++ VE++ R+ T+ L EL Sbjct 310 TACSDADALLDEQVEKFDAMRNLLINAEDRLDELTRRRVEISARVPQTEATLTELTDRHG 369 Query 354 AAAMTSIAGNVTTATERLAFADRNISAARDLADQAV---SGRQAGLVDAVRAAESALGQA 410 A + SI+GNV A ++L FA+ + R +AV +GRQ +V +R+AE AL A Sbjct 370 GAVIASISGNVELARQQLQFAEDSTDQGR----EAVALPAGRQGPVVADIRSAEGALETA 425 Query 411 RALLDAVDSAATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAA 470 LLDA+DSA I A L ++AD+ + A Q L A DL+AA + A Sbjct 426 AKLLDAIDSADDTIGRARDGLAPLIADVTAAVAEA-QQLPDA-------PADLVAAVEKA 477 Query 471 ARALDRARGAA--DPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESR 528 AL A A DPL +F L+ DADL L + R + + AL TAE++ Sbjct 478 RVALATAESEAETDPLGSFAGLSDADADLAEKLGAAHDAADKVARTTQLVTNALETAEAK 537 Query 529 VRAVSEYIDTRRGSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQS 588 +A +++I+TRRG+IG ARTRL+ A++ A ++P A+ A AS A A Sbjct 538 TQAAADFIETRRGAIGSVARTRLSRAQQLGSEAVGLADADPEAALEKARRASRSADEALM 597 Query 589 LANADV------QSAQRAYTRRGGNNAGAILGGIIIGDLLSGGTRGGLGGWIPTSFGGSS 642 A DV Q + A G + GA+L GI++ +L G +RG G W GG S Sbjct 598 AAQNDVVAWTEQQRGEDAARPATGFDTGAVLTGILVDSVLRGSSRG--GSWERAGMGGYS 655 >gi|262204593|ref|YP_003275801.1| hypothetical protein Gbro_4793 [Gordonia bronchialis DSM 43247] gi|262087940|gb|ACY23908.1| protein of unknown function DUF477 [Gordonia bronchialis DSM 43247] Length=691 Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 233/639 (37%), Positives = 349/639 (55%), Gaps = 27/639 (4%) Query 3 LVRLLG---------MVLTILAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTA 53 LV LLG + T+L + LL P+ A+ P ++ +V D+A LT + VT Sbjct 19 LVELLGAMALLFSTLLFSTLLFSTLLGAGPSSAEAPVNMATHVVDSADALTPAQEAEVTE 78 Query 54 AVDRLYADRRIRLWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREY-AFLV 112 +DRLY D+ I+LWVVYV +F+G W RT +S LG+ D LL+VAT + Y F + Sbjct 79 RIDRLYRDQGIQLWVVYVRDFNGLDPAQWGNRTATSSGLGSKDVLLSVATDYQSYDLFPI 138 Query 113 PSAMPGVSEGQVDNVRRYQIEPALHDGDYSGAAVAAANGLN--RSPSSSSRVVLLVTVGI 170 G+ + +D + + PAL D++GAA+AAA+G++ + PS + ++ G Sbjct 139 DPDAVGLDQSDLDTIANDLVLPALKSRDWAGAAIAAADGIDAVKKPSYTGIIIAGAVGGA 198 Query 171 IVIVVAVLLVVMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNA 230 VI LV R R RR+ D+L+ R + T V LAA PL L SR ++ D DNA Sbjct 199 AVIGGGGALVYRRRRKRRQIEDDLSHLRENELT-VDQLAAQPLDVLHPWSREVLTDTDNA 257 Query 231 VRTSTNELALAIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLT 290 ++TS EL LA+ EFGE + APFTQA++ A+ L+ +F +RQ+LDDN PET ++R +L Sbjct 258 IQTSAEELRLAVSEFGEAQCAPFTQALDKARRGLADSFALRQRLDDNVPETADEQRSMLV 317 Query 291 RVIVSAAHADRELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHT 350 ++I + D +L +Q AF+++R+L+INA R D +T+Q V L R+ P +L L Sbjct 318 QIITTCTDVDNDLDAQVTAFDEMRNLLINADTRFDEITRQLVALRARLEPAASKLDALIA 377 Query 351 EFDAAAMTSIAGNVTTATERLAFADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQA 410 + + S+ NV A +++AFA+ + R A A +G+Q V +R+AE ++ QA Sbjct 378 KHGRQTLASVLHNVDLAGDQIAFAEASADQGR-AAITAPAGQQGPAVADIRSAEGSIEQA 436 Query 411 RALLDAVDSAATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTG-DLIAARDA 469 LLDA+D A +I A + +PA++A+++ + A A G G A Sbjct 437 SRLLDAIDHADDNIAAAHSRMPALIAEVEGELTEA------AGLSTDGGPGLATAVAAAQ 490 Query 470 AARALDRARGAADPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRS--LEQALFTAES 527 A A R DPL F L VDAD + A A A+A+R R+ + A+ +A++ Sbjct 491 QAVAAARDNFDTDPLGVFTAL--VDADAELDDALDAARAASAERTRRTEMVTAAIESAQA 548 Query 528 RVRAVSEYIDTRRGSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQ 587 +V A ++I TRRG++ ARTRLAEA+R L +A + +P A A A LA A Sbjct 549 KVSAADDFISTRRGAVQATARTRLAEAQRLLASAQTSATGDPLAAADAARRAGALADQAL 608 Query 588 SLANADVQSAQRAYTRR--GGNNAGAILGGIIIGDLLSG 624 A DV Q+ R G + AGA+LGGI++ L G Sbjct 609 MAAQGDVVGWQQTQQPRSDGASAAGAVLGGILVDSFLRG 647 >gi|258655344|ref|YP_003204500.1| hypothetical protein Namu_5245 [Nakamurella multipartita DSM 44233] gi|258558569|gb|ACV81511.1| protein of unknown function DUF477 [Nakamurella multipartita DSM 44233] Length=695 Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 214/576 (38%), Positives = 299/576 (52%), Gaps = 43/576 (7%) Query 10 VLTILAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWVV 69 V+TI+ L PPA A+PPFRL N +TD G LT S RT V A+D+L A+ I L+VV Sbjct 16 VVTIIG---LTAPPASAEPPFRLPNQITDQVGALTGSDRTDVQTALDQLSAEENIDLYVV 72 Query 70 YVENFSGQSA-LNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVSEGQVDNVR 128 YV+ F SA ++WA +T +TS+LG LLAVAT GR YA VP+ +S+ Q+ V Sbjct 73 YVDTFDEPSAAVDWAAQTWQTSDLGANQMLLAVATGGRAYAVHVPNNFK-ISDAQLQQVA 131 Query 129 RYQIEPALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLVVMRHRNRR 188 QI+P L + D++GAA+AAANG + S V G IV+V A ++ R R + Sbjct 132 TTQIQPELRNDDWAGAAIAAANGYRDALGGGSSTVWWWIAGAIVVVGAGGYLIYRRRAKA 191 Query 189 RRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELALAIEEFGER 248 A L PL+AL S +++D DNAVR S EL+ A +FG Sbjct 192 GAGSGPAGPAGAPGQPAEPLE--PLEALSARSVQVLIDTDNAVRASEFELSAAESDFGHD 249 Query 249 RTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELASQTE 308 A F A ++A+ +L+QAF +RQ++DD+ PE A +R ++ +I A A L +Q++ Sbjct 250 AVAQFRVAFDSARESLTQAFEIRQKVDDDQPEDDATKRAMMNDIIDRCAQASATLDAQSD 309 Query 309 AFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNVTTAT 368 F++LR L P L L L R+ L L +F A+ ++A NV A Sbjct 310 RFDELRGLRSRLPQVLAELPGTIDSLQARMPAAASTLQRLQQQFSPTALATVAANVEQAG 369 Query 369 ERLAFADRNISAARDLA---------------DQAVSGRQAGLVDAVRAAESALGQARAL 413 ERL FA ++ AR A A + A V A AA+ A QAR L Sbjct 370 ERLQFARVSLDQARQQAAGSTPATSTLPLPGQPPATATPPAAAVLAAGAAQEAADQARTL 429 Query 414 LDAVDSAATDIRHAVA-----------SLPAVVADIQTGIKRANQHLQQAQQPQTGRTGD 462 LDA+D A D+ A L AV A + + AN+ +AQ D Sbjct 430 LDAIDRMAADLATATTQLTGAISAVDQELAAVRAALDSATAGANEASIRAQL-------D 482 Query 463 LIAARDAAARALDRARGAADPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQAL 522 I A + AR+ +GAADP+TA ++ + D LD +LA+ Q R +L QAL Sbjct 483 QIQAILSVARS---PQGAADPMTALHKVEEADLALDGILASTRSAQQQEQRSQAALGQAL 539 Query 523 FTAESRVRAVSEYIDTRRGSIGPEARTRLAEAKRQL 558 TA + V A ++++TRRG++G +ARTRLAEAKR L Sbjct 540 PTARAEVAAAEDFVNTRRGAVGSQARTRLAEAKRHL 575 >gi|213965823|ref|ZP_03394015.1| putative conserved transmembrane protein [Corynebacterium amycolatum SK46] gi|213951582|gb|EEB62972.1| putative conserved transmembrane protein [Corynebacterium amycolatum SK46] Length=671 Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 205/636 (33%), Positives = 332/636 (53%), Gaps = 26/636 (4%) Query 6 LLGMVLTILAAGLLLGPP----------------AGAQPPFRLSNYVTDNAGVLTSSGRT 49 LG+ + ++ A L PP A A+ P +S V D AGVL+ Sbjct 13 FLGLSMPLITAALPTQPPVDAPASLLALAPSASLAHAETPTEVSGDVDDLAGVLSGGDEA 72 Query 50 AVTAAVDRLYADRRIRLWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYA 109 + + +L A++R+ V Y+++F G WAQ+ + +L VA R Sbjct 73 RLKEQIQQLKAEKRLLFSVFYIKSFDGIQGEQWAQQAWEHLGAADNRGVLVVAVEDRNLG 132 Query 110 FLVPSAMPGVSEGQVDNVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVG 169 V + P +E V++ + Q+ L D +++ A AA S+ L +G Sbjct 133 AFVGDSFPRNAEA-VNSAAQGQL---LEDDNWAAAGEAAIAEAGGGSGSAGGWALGAGLG 188 Query 170 IIVIVVAVLLVVMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDN 229 +V V R ++R +E+A R +DP +V +L ++ +LD L+R +V D Sbjct 189 GAAVVGGATWAVGRRNKKKRDEEEIARGRNIDPRDVSSLDSLSTSSLDVLARDEIVSTDE 248 Query 230 AVRTSTNELALAIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELL 289 ++R + EL LA EFG R F A+ ++++ L +AF +RQQLDD + +RR +L Sbjct 249 SIRKANTELDLARAEFGTERIRSFDNALKHSQSTLERAFALRQQLDDGSVADEIERRSVL 308 Query 290 TRVIVSAAHADRELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELH 349 +I + AD +L + F+KLR ++NA A + LTQ+ VEL +R+ L L Sbjct 309 LEIISTCGVADDQLDGEAANFQKLRQELMNAEATISKLTQRSVELRSRMPRAGGILDGLR 368 Query 350 TEFDAAAMTSIAGNVTTATERLAFADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQ 409 ++ ++S+ N+ ATE L AD+++S AR +AD +G Q GL+DA+ A + AL Q Sbjct 369 ARYEEQMLSSVTDNIDMATEHLNQADQSMSEARRIADLP-AGEQGGLIDALSATDFALTQ 427 Query 410 ARALLDAVDSAATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDA 469 A +LL+A++ A +DI AVA L +++A+++ I A+ HL A Q L AA +A Sbjct 428 AESLLEAIEHADSDIHAAVAGLASLIAEVRGEIDEAS-HLMSAPQGANINRERLNAAIEA 486 Query 470 AARALDRA--RGAADPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAES 527 AL A + DPL+++ LT D LD L + ++ A+ R +L+ ++ A++ Sbjct 487 GREALGVAANKSEVDPLSSWTALTDADELLDEALDSARDKAASFARAAATLQHSMQDADN 546 Query 528 RVRAVSEYIDTRRGSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQ 587 +RA ++ I TRR +G EARTRLAEA+R +A + P +A+AYA A LAA A Sbjct 547 HIRAAADLIATRRRVVGAEARTRLAEAQRAYGSAQGLANDEPRKALAYARRARKLAAEAA 606 Query 588 SLANADVQSAQRAYTRRGGNNAGAILGGIIIGDLLS 623 LA D++ Q RRGG + G+++ G+++G +LS Sbjct 607 DLARRDIRRYQD--QRRGGGSNGSMVVGMVLGSMLS 640 >gi|332669169|ref|YP_004452177.1| methanol dehydrogenase [Cellulomonas fimi ATCC 484] gi|332338207|gb|AEE44790.1| methanol dehydrogenase [Cellulomonas fimi ATCC 484] Length=663 Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 224/607 (37%), Positives = 309/607 (51%), Gaps = 24/607 (3%) Query 29 PFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWVVYVENFSGQSALNWAQRTTR 88 P L++ VTD G L+ S + V AA+D L L+VVYV +F+GQS ++WAQ T Sbjct 34 PLTLTSDVTDEVGALSGS-QGEVQAALDELSQATPYDLYVVYVADFAGQSPVDWAQATAE 92 Query 89 TSELGNYDALLAVATTGREYAFLVPSAMPGVSEGQVDNVRRYQIEPALHDGDYSGAAVAA 148 S LG D +LAVAT R YA LVP +S G+V E L D++GAA+AA Sbjct 93 QSGLGESDFVLAVATEARRYA-LVPQQSGELSSGEV-QAAATAAEDRLAADDWAGAAIAA 150 Query 149 ANGLNRSPSSSSRVVLLVTVGII-VIVVAVLLVVMRHRNRRRRADELAAARRVDPTN-VM 206 A L RS + V V +I ++V+ L + RRRR +L + V Sbjct 151 AESLQRSATGGGGGGGFVWVLLIGLVVIGALFALPAFLARRRRDKQLGPPPQPQAAGPVD 210 Query 207 ALAAVPLQALDDLSRSMVVDVDNAVRTSTNELALAIEEFGERRTAPFTQAVNNAKAALSQ 266 LAA+P LD S S +V +D+A+R+S EL A +FG T F Q + AK +++ Sbjct 211 ELAALPTAELDKRSSSALVRIDDALRSSEEELGFAQAQFGPDATREFEQVLAGAKQRVTE 270 Query 267 AFTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELASQTEAFEKLRDLVINAPARLDL 326 AF +RQ LDD+ P+T Q RE TR+I + A +L +Q AF++LRD+ LD Sbjct 271 AFRLRQTLDDDIPDTEPQVRETATRIIRTVAQVAADLDAQKSAFDELRDVEARVGDALDA 330 Query 327 LTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNVTTATERLAFADRNISAARDLAD 386 ++ L R+ + L L + A+A+ S+ N A RL D SA Sbjct 331 HEREATTLAARVDTARATLQTLAARYPASALASVTLNPDQA--RLLL-DEVTSALTQGRA 387 Query 387 QAVSGRQAGLVDAVRAAESALGQARALLDAVDSAATDIRHAVASLPAVVADIQTGIKRAN 446 +G +A V RAAE ALGQ R LLDAVD A +D+ A L A +A I + I A Sbjct 388 ALGTGDRATAVRYARAAEEALGQVRVLLDAVDHAGSDLASAGPRLDAAIASITSDIADAE 447 Query 447 QHLQQAQQPQTGRTGDLIAARDAAARALDRAR-GAADPLTAFDQLTKVDADLDRLLATLA 505 + P + A AA AR GA DPL A +++ +A +D LA L Sbjct 448 RL-----GPARPEVAPRVQAAHAAVATAREARTGAGDPLAALRTISEAEAAIDATLAPLR 502 Query 506 EEQATADRLNRSLEQALFTAESRVRAVSEYIDTRRGSIGPEARTRLAEAKRQLEAAHDRK 565 E + ADR + L + L S +RA S+++ TRRG++GPEARTRLAEA+R A D+ Sbjct 503 EARERADRARQLLGETLGRLRSALRATSDFVATRRGAVGPEARTRLAEAERLYRHAEDQA 562 Query 566 SSNPTEAIAYANAASTLAAHAQSLANADVQSA-----QRAYTRRGGNNA-----GAILGG 615 + P A+ A A L A A LA ADV+ A Q RG +A G +LGG Sbjct 563 VTEPEAALESARRAEQLVADAGHLAQADVEQADAYRYQSTGRGRGMGDAVNGVGGMVLGG 622 Query 616 IIIGDLL 622 I++ +L Sbjct 623 ILLDSIL 629 >gi|300780728|ref|ZP_07090582.1| conserved hypothetical protein [Corynebacterium genitalium ATCC 33030] gi|300532435|gb|EFK53496.1| conserved hypothetical protein [Corynebacterium genitalium ATCC 33030] Length=674 Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 186/603 (31%), Positives = 311/603 (52%), Gaps = 11/603 (1%) Query 19 LLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWVVYVENFSGQS 78 +L A A P LS VTD+AGVL+ + + + +A+ +L D+++ +VVY+++F GQ Sbjct 41 VLAQTATALSPTGLSENVTDDAGVLSGAEKQQIESAIQQLKQDKQLNAYVVYMDSFGGQD 100 Query 79 ALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVSEGQVDNVRRYQIEPALHD 138 W + ++ G A+LA+ T G+ F V +A S G VDN+ L Sbjct 101 PAEWVREAI--TDKGPNTAVLAIDTEGK---FNV-NAGSQWSSGDVDNMYDAAY-SQLTG 153 Query 139 GDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLVVMRHRNRRRRADELAAAR 198 +Y A + A N +N S ++ +G + + R++N +R +L +AR Sbjct 154 KNYGAAGLNAINAVNGSSDGEGAALVAGGLGAAALAGGGFYMYGRNKNNKRDRKQLESAR 213 Query 199 RVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELALAIEEFGERRTAPFTQAVN 258 + P + +L +P L++L+ +V D ++R EL +A EFG R PFT A+N Sbjct 214 ALAPGDTESLGRLPTHTLEELAHDALVQTDESIRLGKEELEIASAEFGADRVRPFTSAMN 273 Query 259 NAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELASQTEAFEKLRDLVI 318 A + L +AF Q+L D PET ++R +L +I S A+ L ++ E F+++R +++ Sbjct 274 QATSELQRAFNTHQRLGDAIPETEPEKRAMLIDIISSCGQAEEALKAKAEEFQEMRGVLM 333 Query 319 NAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNVTTATERLAFADRNI 378 A +D + Q+ V+L RI P + L++L + +D ++SI NV A + A+ + Sbjct 334 KANEEVDAIFQRTVDLRARIEPARATLSDLQSRYDEQLLSSITQNVDIAQGSIQEAEGQL 393 Query 379 SAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSAATDIRHAVASLPAVVADI 438 AR LA Q +G+Q L+D +R A+ A+ A L A++ A +I A +LPA++ +I Sbjct 394 EQARGLASQP-AGQQGALIDILRGAQHAVEVADTNLRAIEHAEANISTARTNLPALIQEI 452 Query 439 QTGIKRANQHLQQAQQPQ--TGRTGDLIAARDAAARALDRARGAADPLTAFDQLTKVDAD 496 Q ++ Q QQ Q R D +++R A + R DPL + +LT +DAD Sbjct 453 QDELQEIEQLKQQTNQGARIDVRALDAVSSRAREALSQMGNRPETDPLALYTELTHLDAD 512 Query 497 LDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRRGSIGPEARTRLAEAKR 556 +D + + R + L+Q L A ++++ + I++R I ART LAEAKR Sbjct 513 IDEQIDQARGVASDQQRRLQLLDQQLQVANAQIQGAEDLINSRGRIIRSRARTLLAEAKR 572 Query 557 QLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQRAYTRRGGNN-AGAILGG 615 Q A +R++ + AI +A AA+ A A + AN D+ S + T + N A AI+ G Sbjct 573 QYAEALNRRTQDTKNAIEFARAATDSARRAVNAANDDITSYRNQQTTQSMNTMANAIIWG 632 Query 616 III 618 I+ Sbjct 633 SIL 635 >gi|152965421|ref|YP_001361205.1| hypothetical protein Krad_1453 [Kineococcus radiotolerans SRS30216] gi|151359938|gb|ABS02941.1| protein of unknown function DUF477 [Kineococcus radiotolerans SRS30216] Length=681 Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 220/594 (38%), Positives = 296/594 (50%), Gaps = 45/594 (7%) Query 22 PPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWVVYVENFSGQSALN 81 P A A PPFRL+ VTD G L + VT A L + ++LWVVYV++F G Sbjct 29 PAASAVPPFRLAEQVTDQVGALAGQEQR-VTDAAAALRSGTGVQLWVVYVDSFDGSDGQT 87 Query 82 WAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVSEGQVDNVRRYQIEPALHDGDY 141 WA RT TS LG D LLAVAT R YA+ V + +GQV V R E L D D+ Sbjct 88 WADRTAVTSGLGADDVLLAVATGDRAYAYSVDEGF-RLDDGQVQEVAR-DTEAELADDDW 145 Query 142 SGAAVAAANGLNRS---------PSSSSRVVLLVTVGII----VIVVAVLLVVMRHRNRR 188 +GAAVA A L+ +S S L VG + +V+A++ +V RHR+R Sbjct 146 AGAAVAGAESLDEELTGTSGASSAASGSSAGLWWAVGGLALAGFVVIALVALVRRHRSR- 204 Query 189 RRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELALAIEEFGER 248 PT A P +AL + +++V D+AVR++ EL A EFG Sbjct 205 --------PEATGPTP--EFAGTPTEALRTQADTLLVQADDAVRSAAQELQFAAAEFGTA 254 Query 249 RTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELASQTE 308 TA F+ + A+AAL+QAFT RQ L+D PET QRR +L VI S LA +E Sbjct 255 ATAEFSGVLERARAALTQAFTARQSLEDEVPETEEQRRRVLAEVIASCRSTGATLAEASE 314 Query 309 AFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNVTTAT 368 A + LRDLV AP LD L + L R+ P +++L+ L EF A+ S+A V A Sbjct 315 AVDALRDLVGRAPGVLDALEARLPALRARVEPAREQLSRLAGEFGEPALASVADAVAQAR 374 Query 369 ERLAFADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSAATDIRHAV 428 +RL A + AR A A + R +VDAVR AE+A QA LL V D+R AV Sbjct 375 DRLGVA--EDACARARAALADASRSGEVVDAVRVAEAATAQAEQLLAGVGRTEEDLRRAV 432 Query 429 ASLPAVVADIQTGIKRANQHLQQAQQPQTGRTG------DLIAARDAAARALDRARGAAD 482 +P +A + RA+ A+ P TG AA A A+ +D Sbjct 433 QEVPVALARL-----RAD-----ARTPVEAPTGVSTAGFASAAAAALAVAEASAAQAGSD 482 Query 483 PLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRRGS 542 PL A +L + + LD + +LEQAL A + V A +++ RRG+ Sbjct 483 PLGALHRLVEAERALDDARGAVEAAAGARRSAEAALEQALVAARAEVAAADDFVSARRGA 542 Query 543 IGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQS 596 +GP+ART L EA+R LE A ++P A+ +A A LA A S A+ADV S Sbjct 543 VGPQARTHLGEAQRHLERAVALAGADPAAALEHARQADALAERASSRAHADVSS 596 >gi|296119850|ref|ZP_06838404.1| putative secreted protein [Corynebacterium ammoniagenes DSM 20306] gi|295967004|gb|EFG80275.1| putative secreted protein [Corynebacterium ammoniagenes DSM 20306] Length=663 Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 187/604 (31%), Positives = 316/604 (53%), Gaps = 18/604 (2%) Query 26 AQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWVVYVENFSGQSALNWAQR 85 AQ P +S VTD A VL+S+ + + + +L + ++ + +V+ ++ +G A +AQ Sbjct 37 AQAPTAISERVTDTADVLSSAEESELNDKIAQLQQEEQLMVHIVFTDDLAGMDAEGYAQS 96 Query 86 TTRTSELGNYDALLAVATTGREYAFLVPSAMPGVSEGQVDNVRRYQIEPALHDGDYSGAA 145 +E G A V GR+ P +G++D + P L + D++G+A Sbjct 97 IV--AEKGPNSAAYVVDVQGRQMGVQTGEQWP---QGKLDEMYDAAY-PHLAEDDWAGSA 150 Query 146 ---VAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLVVMRHRNRRRRADELAAARRVDP 202 V AA G +S L G+ V+ + R R+++ A L AR ++P Sbjct 151 NALVDAALG----TGGNSGAWLAGAGGVAVVAGGGIWAYTRSRSKKESAAVLEDAREIEP 206 Query 203 TNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELALAIEEFGERRTAPFTQAVNNAKA 262 T++ L ++ L LD L+ +V D ++R EL +A EFG RT FT+A+N++ + Sbjct 207 TDIRRLNSLDLDTLDSLANEELVSTDESIRRGKEELDIATAEFGPERTRAFTRAMNHSTS 266 Query 263 ALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELASQTEAFEKLRDLVINAPA 322 L +AF +RQ+LDD+ PETP QRRE+L ++ S AD L +Q F ++R+L+INA Sbjct 267 TLQKAFNIRQRLDDSIPETPEQRREMLVEIVSSCGQADDALDAQAAEFAEMRNLLINAST 326 Query 323 RLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNVTTATERLAFADRNISAAR 382 +LD LTQ+ +++ R+ +Q L +LH EF+ + SI+ N A L A++++ AAR Sbjct 327 KLDELTQRTIDVRARLPKAEQTLEQLHAEFNEEMLQSISDNADLAAAALDEAEKSLEAAR 386 Query 383 DLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSAATDIRHAVASLPAVVADIQTGI 442 ++A + +G Q +V +R AE A+ + L V++A ++I A A+LPA++ +++ I Sbjct 387 EVAARP-AGEQGPVVGYIRDAEHAIEVSDRNLTGVENARSNISDAQATLPALIDEVEGEI 445 Query 443 KRANQHLQQAQQPQTG---RTGDLIAARDAAARALDRARGAADPLTAFDQLTKVDADLDR 499 + A Q Q + T + D + R A + +A G+ DPL L +D +LD Sbjct 446 QEAGQLKNQGRSQGTDADWQALDSVVTRAQQAVEVAKAEGSQDPLGQHTALITIDTELDE 505 Query 500 LLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRRGSIGPEARTRLAEAKRQLE 559 L T+ E+ +T R + + A ++++A + I +R +G ART LA+AK Sbjct 506 QLDTVREQTSTHARQLEQFAKQIQAASTQIQAAEDVISSRGRIVGSGARTALADAKHLHA 565 Query 560 AAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQS-AQRAYTRRGGNNAGAILGGIII 618 A + + N AI YA A+ A A A D + ++ R+ GN AG ++ G++I Sbjct 566 QALNSRDRNIRAAIDYARQATNAAKIAADRARDDYNNHRRQQQRRQTGNMAGNLITGMVI 625 Query 619 GDLL 622 G +L Sbjct 626 GQVL 629 >gi|284989085|ref|YP_003407639.1| hypothetical protein Gobs_0486 [Geodermatophilus obscurus DSM 43160] gi|284062330|gb|ADB73268.1| protein of unknown function DUF477 [Geodermatophilus obscurus DSM 43160] Length=691 Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 214/585 (37%), Positives = 305/585 (53%), Gaps = 24/585 (4%) Query 21 GPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWVVYVENFSGQSAL 80 G PA A+PPF + VTD AGVL + +AV AAV L A+ +++L+VVYV++F G Sbjct 19 GGPALAEPPFDVPAQVTDRAGVLVGN-ESAVEAAVTELQAEEQLQLFVVYVDSFDGLDPD 77 Query 81 NWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVSEGQVDNVRRYQIEPALHDGD 140 WA RT S LG D L AVA R Y + P+ +S+ +++ + +EP L GD Sbjct 78 EWATRTAELSGLGGNDVLFAVAVEDRRYTYNPPADF-RLSDQEIEELIASDVEPELTAGD 136 Query 141 YSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLVVMRHRNRRRRADELAAAR-- 198 + GAAVA A GL + V V + VA ++ R+RRRR A R Sbjct 137 FDGAAVAFAEGLGGGGGDGGSGLGTVAVVGGIAAVAGGAYLV-TRSRRRRQGPPPAQRLE 195 Query 199 RVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELALAIEEFGERRTAPFTQAVN 258 R DP A VP + L+ + + ++++D AV+TS +L A ++G+ A F +A+ Sbjct 196 RPDPH-----AGVPTEQLEAQASTALLELDEAVKTSRLDLDYARLQYGQEAVAGFAEALT 250 Query 259 NAKAALSQAFTVRQQLDDNTPETPA-----QRRELLTRVIVSAAHADRELASQTEAFEKL 313 ++ L++AF +RQQLDD A +R LLT ++ A AD L Q EAF++L Sbjct 251 ASEQELARAFALRQQLDDEVGGREAGTAELTKRRLLTEMLQLTAAADARLDEQAEAFDRL 310 Query 314 RDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNVTTATERLAF 373 RDL AP LD L + L R+ ++R A L + AA+ +A N+ A RL Sbjct 311 RDLERTAPQALDALASRATALRGRLPADEERFAALQRRYAPAALAPVADNLAQARARLDA 370 Query 374 ADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSAATDIRHAVASLPA 433 A++ I+ AR + +GR V +R AE AL Q LLDAV TD++ A A + Sbjct 371 AEQEITEARG---EIAAGRAGAAVGDIRVAEDALAQTGTLLDAVARLGTDLQAAEARVAQ 427 Query 434 VVADIQTGIKRANQHLQQAQ----QPQTGRTGDLIAARDAAARALDRARGAADPLTAFDQ 489 V A+ + + A L +PQ R + A DAA R D R DP+ A + Sbjct 428 VRAETEEDLAEARALLAGGTGGGLRPQVARAEAALTAADAALRPADGGR--PDPMAALRR 485 Query 490 LTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRRGSIGPEART 549 L + D L++ L + A R SL+QAL TA S V A ++I TRRG++GPEART Sbjct 486 LEEADIALEQALGLARDADQRARRAAASLDQALLTARSGVAAAGDFIGTRRGAVGPEART 545 Query 550 RLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADV 594 RLAEA+R L+ A + ++P A+ A A TLA A A +DV Sbjct 546 RLAEAQRHLDLAVAQGRTDPVGALREAQMADTLAQQALQQAQSDV 590 >gi|331695502|ref|YP_004331741.1| hypothetical protein Psed_1652 [Pseudonocardia dioxanivorans CB1190] gi|326950191|gb|AEA23888.1| protein of unknown function DUF477 [Pseudonocardia dioxanivorans CB1190] Length=659 Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 214/618 (35%), Positives = 311/618 (51%), Gaps = 36/618 (5%) Query 14 LAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWVVYVEN 73 ++AGL A A P R ++ +TD A L +SGR VT A+ RL D L+VVYV + Sbjct 21 MSAGL-----ASADAPLRAADRITDRANALDASGRAQVTDAIARLRTDTGYDLFVVYVRS 75 Query 74 FSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVSEGQVDNVRRYQIE 133 F G+S +WA T S+LG D LLAVAT Y + V P VD + Q+E Sbjct 76 FDGRSGEDWAHATAVQSQLGARDVLLAVATDDGAYGYSVEDGFPV----PVDTIAAEQVE 131 Query 134 PALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLVVMRHRNRRRRADE 193 P L D+SGAAVA ANGL SS + + LV G++++ L+ R R+ ++ Sbjct 132 PKLAARDWSGAAVAMANGLRTGGSSGTGALPLVIGGVVIVGGGAWLLTRRRRSAATTSEA 191 Query 194 LAAA----RRVDPTNVMALAAVPLQALDDL---SRSMVVDVDNAVRTSTNELALAIEEFG 246 A + P + P ++ +DL S ++ VD+AVRTS EL+ A FG Sbjct 192 TTPAGAPQQPAGPPDPF-----PGESTEDLGYRSSQALIAVDDAVRTSEQELSAARAHFG 246 Query 247 ERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELASQ 306 E APF A++ ++A + AF +RQQLDD+ PE +R + ++ A AD L +Q Sbjct 247 EEPVAPFAAALDASRADMLAAFEIRQQLDDDVPEDEPTQRRMHAEILRLATAADERLDAQ 306 Query 307 TEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNVTT 366 EAF++LR L +AP ++ + + T + + EL + A ++ +AGN+ Sbjct 307 VEAFDRLRGLEADAPGYVEGVASRVAAATGSVATVEAAWDELRRRWAATSLEPVAGNLDQ 366 Query 367 ATERLAFADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSAATDIRH 426 A LA A I+ AR ++ +VD RAAE A+ QA LL V+ ++ Sbjct 367 AKALLADAATEIAEAR----ARLATPPQAVVDG-RAAEDAVTQAETLLAGVERRDRELVE 421 Query 427 AVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGAADPLTA 486 A +PA A+++ + A A P R A A A DP+ A Sbjct 422 AAGRIPAARAEVEQDLAEA------ATLPSADRAVVARARAALDAAAAAADAPLPDPVAA 475 Query 487 FDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRRGSIGPE 546 L + DA LDR +A E+Q R +L+Q L TA S V A +++ TRRG+IG + Sbjct 476 LHLLEEADAALDRTIADAREQQDRDRRTAAALDQVLVTARSAVAAAEDFVTTRRGAIGAQ 535 Query 547 ARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQRAYTRRGG 606 ARTRLAEA+R L+AA +P A+ A A ++A A LA ADV A+ + GG Sbjct 536 ARTRLAEAQRHLQAAT--AGGDPAVALRSAQQAESMAQQALQLAQADV--ARWSGPSGGG 591 Query 607 NNAGAILGGIIIGDLLSG 624 A LG +++G +LSG Sbjct 592 GGAAVELGSLVLGGILSG 609 >gi|148272317|ref|YP_001221878.1| hypothetical protein CMM_1137 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830247|emb|CAN01181.1| conserved hypothetical protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length=680 Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 197/588 (34%), Positives = 294/588 (50%), Gaps = 54/588 (9%) Query 36 VTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWVVYVENFSGQS-ALNWAQRTTRTSELGN 94 + D +T + + A+D L D I L V YV+ F+G++ W + T + G Sbjct 38 ILDQVDAVTPAQEQQIQQAIDTLRTDTGITLHVAYVDTFTGEADQAAWGRATNSANGFGG 97 Query 95 YDALLAVATTGREYAFLVPSAMPGVSEGQVDNVRRYQIEPALHDGDYSGAAVAAANGLNR 154 DALLAVA GR+ +F P+ + SE D + + I P L D D+SGAAVAAA G+ Sbjct 98 SDALLAVAVDGRQVSFGAPAQL---SESARDQLLQNGIRPELQDSDWSGAAVAAAQGIES 154 Query 155 S--------------PSSSSRVVL-------LVTVGIIVIVVAVLLVVMRHRNRRRRADE 193 PSS + + LV I+V VA LV RR++ Sbjct 155 QARTGTGTESGTGATPSSGNSSGIDFGLVLLLVLGAILVAAVATTLV-----GRRKKRKA 209 Query 194 LAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELALAIEEFGERRTAPF 253 +AA R+ A ++ + + SM+V +D+A+ TS E+ A EFG P+ Sbjct 210 VAAKRQA--------ALAEMRTAEQRAGSMLVQLDDALETSEQEVGFAEAEFGSGAVGPY 261 Query 254 TQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELASQTEAFEKL 313 + + +A + +AF ++Q+LDD +T +RR R++ A EL +Q E+FE+L Sbjct 262 REVLVSAGGKVREAFALKQKLDDTIEDTDEERRTWAARIVDLCEEARAELDAQAESFEEL 321 Query 314 RDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNVTTATERLAF 373 R L NAP L + + L TRI TQ+ + L + +MT++ GNV A L+F Sbjct 322 RALEENAPQTLSAIVTEAESLKTRIERTQEAVDLLGRRYAGPSMTTVTGNVDQARSLLSF 381 Query 374 ADRNISAARDLADQAVSGRQAG-------LVDAVRAAESALGQARALLDAVDSAATDIRH 426 A D A +A +AG + VRAA+ A+GQA LLD VD ++D+ H Sbjct 382 A-------TDTAQEAAEAIRAGDRASTGEIAVKVRAAQQAVGQAGTLLDGVDRVSSDLEH 434 Query 427 AVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGAADPLTA 486 A + +AD+++ I+ A + + P+ R + AA A A A ADPLT+ Sbjct 435 ASTRVQEEIADVRSDIQDARAAQRGGRMPELTRL--VEAAEQAIADAKPLQGRLADPLTS 492 Query 487 FDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRRGSIGPE 546 L + +A LD LA + E+Q R L +AL TAES+V ++I TRRG +G E Sbjct 493 VTLLQEAEARLDEALAPVREQQEQVQRAIGYLPRALSTAESQVATARDFISTRRGGVGEE 552 Query 547 ARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADV 594 ARTRLA A+R L+ AH+ +P A+A A AA++ +A A A D+ Sbjct 553 ARTRLAHAQRALDDAHEAAPRDPVRAVAAAQAATSYSAQAIEAAQRDL 600 >gi|145296229|ref|YP_001139050.1| hypothetical protein cgR_2146 [Corynebacterium glutamicum R] gi|140846149|dbj|BAF55148.1| hypothetical protein [Corynebacterium glutamicum R] Length=685 Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 192/648 (30%), Positives = 313/648 (49%), Gaps = 39/648 (6%) Query 4 VRLLGMVLTILAAGLLLGPP-------------AGAQPPFRLSNYVTDNAGVLTSSGRTA 50 VR + + + I A LL+ P A+ P + VTD G ++SS T Sbjct 12 VRRVSVTVAIGAGALLISGPFFTAHTAEATETYVLAESPEFYQDNVTDYTGQISSSDITN 71 Query 51 VTAAVDRLYADRRIRLWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAF 110 + AA+D + A + ++VV++ +F G W Q+ + + GN + A+A R+Y Sbjct 72 IQAAIDDVKASEQKVIFVVFLSSFDGVDPETWTQQALQANGGGNV-LVYALAPEERQYGI 130 Query 111 LVPSAMPGVSEGQVD--NVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSSSRVV----- 163 + ++ ++D N +Q AL D++G+A+A A + S +S Sbjct 131 QGGTQW---TDAELDAANNAAFQ---ALSQEDWAGSALALAESVGSSSGASGTSGSSGSS 184 Query 164 ---LLVTVGIIVIVVAVLLVVMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLS 220 L V + R R ++ A L AR +DP + L +P++ L+ L+ Sbjct 185 GAWLAAAGVGTVAAGGGIWAYSRSRKKKTSAATLEDAREIDPRDTNRLMQLPMETLEHLA 244 Query 221 RSMVVDVDNAVRTSTNELALAIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPE 280 + + D+++R ELA+A EFG RT F +A+NN+ L +AF ++Q+L+D+ PE Sbjct 245 QEELTSTDDSIRRGKEELAIATSEFGPERTRSFNRAMNNSTGTLQKAFEIQQRLNDSIPE 304 Query 281 TPAQRRELLTRVIVSAAHADRELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGP 340 + A+RR +L +I S AD L ++ + F +R+L+INA ++LD LTQ+ V+L TR+ Sbjct 305 SEAERRSMLVEIISSCGQADDALDAEAQNFADMRNLLINAGSKLDALTQKSVDLRTRLPK 364 Query 341 TQQRLAELHTEFDAAAMTSIAGNVTTATERLAFADRNISAARDLADQAVSGRQAGLVDAV 400 Q+ LA L T + A + SI NV A+ L A+ + A ++ + +G Q GL+DA+ Sbjct 365 AQETLAALRTRYSAEVLESIDDNVDLASASLDEAEEVLPQAYEI-ESMPAGEQGGLIDAI 423 Query 401 RAAESALGQARALLDAVDSAATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRT 460 R E A+ A LL+ V+ A +I A A++ ++ +I I A Q Q A G Sbjct 424 RHIEHAITTADKLLEGVEHADENISTAKANVADLIQEISDEINEAGQLKQSA--GADGAR 481 Query 461 GDLIAARDAA-----ARALDRARGAADPLTAFDQLTKVDADLDRLLATLAEEQATADRLN 515 D + DA A A DPL + +L VD+ LD L TL A R Sbjct 482 ADWASLDDAVRAASAALTTASADAEKDPLGTYTELVDVDSALDTQLDTLRATAADQARQL 541 Query 516 RSLEQALFTAESRVRAVSEYIDTRRGSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAY 575 R +Q L +A S+++ + I TR + EART LA A++ A ++ + I Y Sbjct 542 RVFDQQLQSARSQIQKAEDLISTRGRIVKSEARTHLANAQKLYAMAQQNRTRDTRAGIDY 601 Query 576 ANAASTLAAHAQSLANADVQSAQRAYTRRGGNNAGAILGGIIIGDLLS 623 A+ A A A D+ + + GG GAI+ G++I +L+ Sbjct 602 GRQAAVAAQRASKSAQNDITTYNNRHN-SGGGTTGAIVTGMVINSILN 648 >gi|170781853|ref|YP_001710185.1| putative integral membrane protein [Clavibacter michiganensis subsp. sepedonicus] gi|169156421|emb|CAQ01569.1| putative integral membrane protein [Clavibacter michiganensis subsp. sepedonicus] Length=683 Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 192/551 (35%), Positives = 286/551 (52%), Gaps = 40/551 (7%) Query 64 IRLWVVYVENFSGQS-ALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVSEG 122 + L V YV+ F+G S A W Q T + + G+ DALLAVA GREYAF P+ G G Sbjct 66 VTLHVAYVDTFTGASDAKAWGQETKQANSFGSSDALLAVAVDGREYAF--PT---GQVSG 120 Query 123 QVDNVRRYQIEPALHDGDYSGAAVAAANGLNR------------SPS----SSSRVVLLV 166 ++ I P L D+SGAAVA A G+ +PS S L++ Sbjct 121 DQESFETTVIVPQLRADDWSGAAVATAQGMESVARTGSVADTRTTPSGGNDSGIDFGLVL 180 Query 167 TVGIIVIVVAVLLVVMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVD 226 + + I+VA + + R R+R+A +AA R+V A ++ + + SM+V Sbjct 181 LLVLGAILVAAVGTTLVGRRRKRKA--IAATRQV--------ALAEMRTAEQRAGSMLVQ 230 Query 227 VDNAVRTSTNELALAIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRR 286 +D+A+ TS E+ A EFG P+ + + +A + +AF ++Q+LDD +T +RR Sbjct 231 LDDALETSEQEVGFAEAEFGSGAVGPYREVLVSAGGKVREAFALKQKLDDTIEDTDEERR 290 Query 287 ELLTRVIVSAAHADRELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLA 346 R++ A EL +Q E+FE+LR L NAP L + L TRI TQ+ + Sbjct 291 TWAARIVDLCEEARAELDAQAESFEELRALEKNAPQTLAAIVTDAEALKTRIERTQEAVD 350 Query 347 ELHTEFDAAAMTSIAGNVTTATERLAFA-DRNISAARDL--ADQAVSGRQAGLVDAVRAA 403 L + +MT++ GNV A L+FA D AA + D+A +G + VRAA Sbjct 351 LLGRRYAGPSMTTVTGNVDQARSLLSFATDTAQEAAEAIRAGDRASTGE---IAVKVRAA 407 Query 404 ESALGQARALLDAVDSAATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDL 463 + A+GQA LLD VD ++D+ HA + +AD+++ I+ A + + P+ R + Sbjct 408 QQAVGQAGKLLDGVDRVSSDLEHASTRVQEEIADVRSDIQDARAAQRGGRMPELTRL--V 465 Query 464 IAARDAAARALDRARGAADPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALF 523 AA A A A ADPLT+ L + +A LD LA + E+Q R L +AL Sbjct 466 EAAEQAIADAKPLQGRLADPLTSVTLLQEAEARLDEALAPVREQQEQVQRAIGYLPRALS 525 Query 524 TAESRVRAVSEYIDTRRGSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLA 583 TAES+V ++I TRRG +G EARTRLA A+R L+ AH+ +P A+A + AA+ + Sbjct 526 TAESQVATARDFISTRRGGVGEEARTRLAHAQRALDDAHEAAPRDPVRAVAASQAATAYS 585 Query 584 AHAQSLANADV 594 A A A D+ Sbjct 586 AQAIEAAQRDL 596 >gi|21325046|dbj|BAB99668.1| Chromosome segregation ATPases [Corynebacterium glutamicum ATCC 13032] Length=679 Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 196/652 (31%), Positives = 316/652 (49%), Gaps = 46/652 (7%) Query 4 VRLLGMVLTILAAGLLLGPP-------------AGAQPPFRLSNYVTDNAGVLTSSGRTA 50 VR + + + I A LL+ P A+ P + VTD G ++SS T Sbjct 7 VRRVSVTVAIGAGALLISGPFFTAHTAEATETYVLAESPEFYQDNVTDYTGQISSSDITN 66 Query 51 VTAAVDRLYADRRIRLWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAF 110 + AA+D + A + ++VV++ +F G W Q+ + + GN + A+A R+Y Sbjct 67 IQAAIDDVKASEQKVIFVVFLSSFDGVDPETWTQQALQANGGGNV-LIYALAPEERQYGI 125 Query 111 LVPSAMPGVSEGQVD--NVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSSSRVV----- 163 + ++ ++D N +Q AL D++G+A+A A + S SSSS Sbjct 126 QGGTQW---TDAELDAANNAAFQ---ALSQEDWAGSALALAESVGSSSSSSSGSSSSSDF 179 Query 164 ----LLVTVGIIVIVVAVLLVVMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDL 219 L V + R R ++ A L AR +DP + L +P++ L+ L Sbjct 180 SGAWLAAAGVGTVAAGGGIWAYSRSRKKKTSAATLEDAREIDPRDTNRLMQLPMETLEHL 239 Query 220 SRSMVVDVDNAVRTSTNELALAIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTP 279 ++ + D+++R ELA+A EFG RT F +A+N++ L +AF ++Q+L+D+ P Sbjct 240 AQEELTSTDDSIRRGKEELAIATSEFGPERTRSFNRAMNHSTGTLQKAFEIQQRLNDSIP 299 Query 280 ETPAQRRELLTRVIVSAAHADRELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIG 339 E+ A+R+ +L +I S AD L ++ + F +R+L+INA ++LD LTQ+ V+L TR+ Sbjct 300 ESEAERQSMLVEIISSCGQADDALDAEAQNFADMRNLLINAGSKLDALTQKSVDLRTRLP 359 Query 340 PTQQRLAELHTEFDAAAMTSIAGNVTTATERLAFADRNISAARDLADQAVSGRQAGLVDA 399 Q+ LA L T + A + SI NV A+ L A+ + A ++ + +G Q GL+DA Sbjct 360 KAQETLAGLRTRYSAEVLESIDDNVDLASASLDEAEEVLPQAYEI-ESMPAGEQGGLIDA 418 Query 400 VRAAESALGQARALLDAVDSAATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGR 459 +R E A+ A LL V+ A +I A A++ ++ +I I A Q Q A G Sbjct 419 IRHIEHAITTADKLLAGVEHADENISTAKANVADLIQEISDEINEAGQLKQSA--GADGA 476 Query 460 TGDLIAARDA-----AARALDRARGAADPLTAFDQLTKVDADLDRLLATLAEEQATADRL 514 D + DA AA A DPL + +L VD+ LD L TL A R Sbjct 477 RADWASLDDAVRAASAALITASADAEKDPLGTYTELVDVDSALDTQLDTLRATAADQARQ 536 Query 515 NRSLEQALFTAESRVRAVSEYIDTRRGSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIA 574 R +Q L +A S+++ + I TR + EART LA A++ A ++ + I Sbjct 537 LRVFDQQLQSARSQIQKAEDLISTRGRIVKSEARTHLANAQKLYAMAQQNRTRDTRAGID 596 Query 575 YANAASTLAAHAQSLANADVQSAQRAYTRR---GGNNAGAILGGIIIGDLLS 623 Y A+ A A A D+ + Y R GG GAI+ G++I +L+ Sbjct 597 YGRQAAVAAQRASKSAQNDITT----YNNRHNSGGGTTGAIVTGMVINSILN 644 >gi|19553473|ref|NP_601475.1| chromosome segregation ATPase [Corynebacterium glutamicum ATCC 13032] gi|62391116|ref|YP_226518.1| hypothetical protein cg2496 [Corynebacterium glutamicum ATCC 13032] gi|41326455|emb|CAF20617.1| putative secreted protein [Corynebacterium glutamicum ATCC 13032] Length=684 Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 196/649 (31%), Positives = 318/649 (49%), Gaps = 40/649 (6%) Query 4 VRLLGMVLTILAAGLLLGPP-------------AGAQPPFRLSNYVTDNAGVLTSSGRTA 50 VR + + + I A LL+ P A+ P + VTD G ++SS T Sbjct 12 VRRVSVTVAIGAGALLISGPFFTAHTAEATETYVLAESPEFYQDNVTDYTGQISSSDITN 71 Query 51 VTAAVDRLYADRRIRLWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAF 110 + AA+D + A + ++VV++ +F G W Q+ + + GN + A+A R+Y Sbjct 72 IQAAIDDVKASEQKVIFVVFLSSFDGVDPETWTQQALQANGGGNV-LIYALAPEERQYGI 130 Query 111 LVPSAMPGVSEGQVD--NVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSSSRVV----- 163 + ++ ++D N +Q AL D++G+A+A A + S SSSS Sbjct 131 QGGTQW---TDAELDAANNAAFQ---ALSQEDWAGSALALAESVGSSSSSSSGSSSSSDF 184 Query 164 ----LLVTVGIIVIVVAVLLVVMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDL 219 L V + R R ++ A L AR +DP + L +P++ L+ L Sbjct 185 SGAWLAAAGVGTVAAGGGIWAYSRSRKKKTSAATLEDAREIDPRDTNRLMQLPMETLEHL 244 Query 220 SRSMVVDVDNAVRTSTNELALAIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTP 279 ++ + D+++R ELA+A EFG RT F +A+N++ L +AF ++Q+L+D+ P Sbjct 245 AQEELTSTDDSIRRGKEELAIATSEFGPERTRSFNRAMNHSTGTLQKAFEIQQRLNDSIP 304 Query 280 ETPAQRRELLTRVIVSAAHADRELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIG 339 E+ A+R+ +L +I S AD L ++ + F +R+L+INA ++LD LTQ+ V+L TR+ Sbjct 305 ESEAERQSMLVEIISSCGQADDALDAEAQNFADMRNLLINAGSKLDALTQKSVDLRTRLP 364 Query 340 PTQQRLAELHTEFDAAAMTSIAGNVTTATERLAFADRNISAARDLADQAVSGRQAGLVDA 399 Q+ LA L T + A + SI NV A+ L A+ + A ++ + +G Q GL+DA Sbjct 365 KAQETLAGLRTRYSAEVLESIDDNVDLASASLDEAEEVLPQAYEI-ESMPAGEQGGLIDA 423 Query 400 VRAAESALGQARALLDAVDSAATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGR 459 +R E A+ A LL V+ A +I A A++ ++ +I I A Q Q A G Sbjct 424 IRHIEHAITTADKLLAGVEHADENISTAKANVADLIQEISDEINEAGQLKQSA--GADGA 481 Query 460 TGDLIAARD---AAARALDRARGAA--DPLTAFDQLTKVDADLDRLLATLAEEQATADRL 514 D + D AA+ AL A A DPL + +L VD+ LD L TL A R Sbjct 482 RADWASLDDAVRAASAALITASADAEKDPLGTYTELVDVDSALDTQLDTLRATAADQARQ 541 Query 515 NRSLEQALFTAESRVRAVSEYIDTRRGSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIA 574 R +Q L +A S+++ + I TR + EART LA A++ A ++ + I Sbjct 542 LRVFDQQLQSARSQIQKAEDLISTRGRIVKSEARTHLANAQKLYAMAQQNRTRDTRAGID 601 Query 575 YANAASTLAAHAQSLANADVQSAQRAYTRRGGNNAGAILGGIIIGDLLS 623 Y A+ A A A D+ + + GG GAI+ G++I +L+ Sbjct 602 YGRQAAVAAQRASKSAQNDITTYNNRHN-SGGGTTGAIVTGMVINSILN 649 >gi|269796420|ref|YP_003315875.1| methanol dehydrogenase [Sanguibacter keddieii DSM 10542] gi|269098605|gb|ACZ23041.1| beta-propeller domain-containing protein, methanol dehydrogenase [Sanguibacter keddieii DSM 10542] Length=694 Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 206/602 (35%), Positives = 305/602 (51%), Gaps = 28/602 (4%) Query 26 AQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWVVYVENFSGQSALNWAQR 85 A P L + +TD AGVL + AV +A+ L +D +L+V +V +F G WAQ+ Sbjct 57 ADEPLDLPSEITDTAGVLDTD---AVQSALVELRSDTDQQLFVAFVPSFDGTDGPAWAQQ 113 Query 86 TTRTSELGNYDALLAVATTGREYAFLVPSAMPGVSEGQVDNVRRYQIEPALHDGDYSGAA 145 T S +G D LLAVA R YA V S P V++ Q+D V +E L + D++G A Sbjct 114 TYDLSGMGTNDVLLAVAVDDRRYALYVGSGNP-VTDAQLDAVE-IAVEDRLAEDDWTGGA 171 Query 146 VAAANGLNR--SPSSSSRVVLLVTVGIIVIVVAVLLVVMRHRNRRRRADELAAARRVDPT 203 VAAA+ L + S + V ++ VG +V++ + LV RRR A A + Sbjct 172 VAAADTLRSELTGGSGTSAVSVLLVGGLVVIALIALVAWAASRRRRSAGNPAEGQ----- 226 Query 204 NVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELALAIEEFGERRTAPFTQAVNNAKAA 263 L+ + L+ + S +V VD+ ++ + EL A +FG T F A+ +KA Sbjct 227 ----LSTLSTDELERRASSSLVAVDDDLKNAEQELGFAQAQFGPEATDAFAAALQQSKAK 282 Query 264 LSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELASQTEAFEKLRDLVINAPAR 323 +++AFT+RQQLDD+ PE Q+R LL ++ L +++E F LRDL P Sbjct 283 VTRAFTLRQQLDDHAPEAEPQKRVLLAEIVTLCQDVTETLEAESEQFAALRDLQATVPQV 342 Query 324 LDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNVTTATERLAFADRNISAARD 383 L ++ R P + L+ L + AAA+ S+ GN A L A ++++ Sbjct 343 LAETRERIATTRARTEPARGTLSTLAVSYPAAALASVTGNPDQALRLLDAAGDSVTS--- 399 Query 384 LADQAVS-GRQAGLVDAVRAAESALGQARALLDAVDSAATDIRHAVASLPAVVADIQTGI 442 + AV+ G +A V RAA A+ QA LLDAV+SA +D+ A L A + I + I Sbjct 400 -GEAAVTGGDRATAVAHSRAASQAVAQASTLLDAVESAGSDLASAGPRLDAALTSISSDI 458 Query 443 KRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGAADPLTAFDQLTKVDADLDRLLA 502 A++ A P G + A A A+ AR DPL A +T+ +A LD LA Sbjct 459 ADADRL--GAGDPAVGAAAERARAVVAQAQT---ARQGGDPLAAVRDVTEAEAALDAALA 513 Query 503 TLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRRGSIGPEARTRLAEAKRQLEAAH 562 E R L + L S++R+VS+++ TR+G++GPEARTRL+EA R + A Sbjct 514 PRREAAEQRTRATALLTETLGRVGSQIRSVSDFVATRKGAVGPEARTRLSEASRLHDEAR 573 Query 563 DRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQ-RAYTRRGGNNAGA-ILGGIIIGD 620 +++P A+ A L AQ LA ADVQS + R GG N G ILGGI++ Sbjct 574 ALAATDPVAALDTATRCEHLVQSAQQLAQADVQSWENRQGPGSGGTNVGGMILGGILVDS 633 Query 621 LL 622 +L Sbjct 634 IL 635 >gi|344044348|gb|EGV40026.1| hypothetical protein CgS9114_10377 [Corynebacterium glutamicum S9114] Length=681 Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 190/648 (30%), Positives = 311/648 (48%), Gaps = 39/648 (6%) Query 4 VRLLGMVLTILAAGLLLGPP-------------AGAQPPFRLSNYVTDNAGVLTSSGRTA 50 VR + + + I A LL+ P A+ P + VTD G ++SS T Sbjct 12 VRRVSVTVAIGAGALLISGPFFTAHTAEATETYVLAESPEFYQDNVTDYTGQISSSDITN 71 Query 51 VTAAVDRLYADRRIRLWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAF 110 + AA+D + A + ++VV++ +F G W Q+ + + GN + A+A R+Y Sbjct 72 IQAAIDDVKASEQKVIFVVFLSSFDGVDPETWTQQALQANGGGNV-LVYALAPEERQYGI 130 Query 111 LVPSAMPGVSEGQVD--NVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSSSRVV----- 163 + ++ ++D N +Q AL D++G+A+A A + S +S Sbjct 131 QGGTQW---TDAELDAANNAAFQ---ALSQEDWAGSALALAESVGSSSGASGTSGSSGSS 184 Query 164 ---LLVTVGIIVIVVAVLLVVMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLS 220 L V + R R ++ A L AR +DP + L +P++ L+ L+ Sbjct 185 GAWLAAAGVGTVAAGGGIWAYSRSRKKKTSAATLEDAREIDPRDTNRLMQLPMETLEHLA 244 Query 221 RSMVVDVDNAVRTSTNELALAIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPE 280 + + D+++R ELA+A EFG RT F +A+N++ L +AF ++Q+L+D+ PE Sbjct 245 QEELTSTDDSIRRGKEELAIATSEFGPERTRSFNRAMNHSTGTLQKAFEIQQRLNDSIPE 304 Query 281 TPAQRRELLTRVIVSAAHADRELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGP 340 + A+RR +L +I S AD L ++ + F +R+L+INA ++LD LTQ+ V+L TR+ Sbjct 305 SEAERRSMLVEIISSCGQADDALDAEAQNFADMRNLLINAGSKLDALTQKSVDLRTRLPK 364 Query 341 TQQRLAELHTEFDAAAMTSIAGNVTTATERLAFADRNISAARDLADQAVSGRQAGLVDAV 400 Q+ LA L + A + SI NV A+ L A+ + A + + +G Q GL+DA+ Sbjct 365 AQETLAGLRARYSAEVLESIDDNVDLASASLDEAEEVLPQAYKI-ESMPAGEQGGLIDAI 423 Query 401 RAAESALGQARALLDAVDSAATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRT 460 R E A+ A LL+ V+ A +I A A++ ++ +I I A Q Q A G Sbjct 424 RHIEHAITTADKLLEGVEHADENISTAKANVADLIQEISDEINEAGQLKQSA--GADGAR 481 Query 461 GDLIAARDAA-----ARALDRARGAADPLTAFDQLTKVDADLDRLLATLAEEQATADRLN 515 D + DA A A DPL + +L VD+ LD L TL A R Sbjct 482 ADWASLDDAVRAASAALTTASADAEKDPLGTYTELVDVDSALDTQLDTLRATAADQARQL 541 Query 516 RSLEQALFTAESRVRAVSEYIDTRRGSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAY 575 R +Q L +A S+++ + I TR + EART LA A++ A ++ + I Y Sbjct 542 RVFDQQLQSARSQIQKAEDLISTRGRIVKSEARTHLANAQKLYAMAQQNRTRDTRAGIDY 601 Query 576 ANAASTLAAHAQSLANADVQSAQRAYTRRGGNNAGAILGGIIIGDLLS 623 A+ A A A D+ + + GG GAI+ G++I +L+ Sbjct 602 GRQAAVAAQRASKSAQNDITTYNNRHN-SGGGTTGAIVTGMVINSILN 648 >gi|227504564|ref|ZP_03934613.1| conserved transmembrane protein [Corynebacterium striatum ATCC 6940] gi|227198884|gb|EEI78932.1| conserved transmembrane protein [Corynebacterium striatum ATCC 6940] Length=681 Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 196/614 (32%), Positives = 314/614 (52%), Gaps = 31/614 (5%) Query 29 PFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWVVYVENFSGQSALNWAQRTTR 88 P ++ VTDNAGVL+SS ++ + + L D + L+VV+ G +A ++A Sbjct 47 PSSVTQKVTDNAGVLSSSEKSQLQEKITSLQKDEGLILYVVFENTLPG-TAQDYADEFID 105 Query 89 TSELGNYDALLAVATTGREYAFLVPSAMP-GVSEGQVDNVRRYQIEPALHDGDYSGAAVA 147 G A+ V+ R +A G S+ D + L + D+ G+A+A Sbjct 106 AK--GPNSAVYVVSVEDRTVGVQTGNAWSSGRSDAMYDAASAH-----LAEDDFGGSALA 158 Query 148 AANG-------------LNRSPSSSSRVVLLVTVGIIVIVVAVLLVVMRHRNRRRRADEL 194 A+ S S S L G + + + R + ++ A L Sbjct 159 LADAAVSGSTGSSGSAGGAGSDSGSGAGWLAGGAGALAVAGGGIWAASRRKTKKDNAQNL 218 Query 195 AAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELALAIEEFGERRTAPFT 254 +AR ++P + +L+++P + L +L+R +V D ++R EL +A EFG RT PFT Sbjct 219 ESARAIEPGDTNSLSSLPTETLQELAREELVSTDESIRRGKEELDIATAEFGPERTRPFT 278 Query 255 QAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELASQTEAFEKLR 314 +A+N++ L +AF ++Q+LDD+ PE+ A+RR++L ++ S AD L +Q F K+R Sbjct 279 RAMNHSTTTLQKAFALQQRLDDSIPESEAERRQMLIEIVSSCGQADDALDAQAADFAKMR 338 Query 315 DLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNVTTATERLAFA 374 DL+IN+ ++LD LTQ+ V++ TRI +Q LA L ++ A A+ SI N AT + A Sbjct 339 DLLINSDSKLDELTQRTVDIRTRITQAEQTLAGLVSKHPAEALVSIEDNPHMATVSVGEA 398 Query 375 DRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSAATDIRHAVASLPAV 434 ++ + R LA Q +G+Q GLV +R +E A+ A LL V++A ++ A ++L A+ Sbjct 399 EKLLEQGRTLAAQP-AGQQGGLVGIIRDSEHAIEVADRLLSGVENAEANLAAAHSNLSAL 457 Query 435 VADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALD-----RARGAADPLTAFDQ 489 +A+++ I+ A Q +AQ + G D A D +RA A A DPL + Sbjct 458 IAEVRGEIEEAQQL--EAQGKKLGTDADWEALGDVTSRAQQAVSAAEAGQATDPLGHYTT 515 Query 490 LTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRRGSIGPEART 549 L +D++LD L + E AT R Q + AES ++A + I TR +G +ART Sbjct 516 LIAIDSELDERLDAVREATATQARQLDLYTQQMQAAESNIQAAEDVISTRGRVVGAQART 575 Query 550 RLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQRAYTRR-GGNN 608 LA+AKR A K+SN AI + A A A A D+ S +R R+ G+ Sbjct 576 ALADAKRLYAQAMQLKNSNLRGAIDASRQAVAAAQTAARRAQDDIDSYRRRQQRQAAGST 635 Query 609 AGAILGGIIIGDLL 622 AG I+ G++IG +L Sbjct 636 AGDIITGMVIGQML 649 >gi|225021790|ref|ZP_03710982.1| hypothetical protein CORMATOL_01818 [Corynebacterium matruchotii ATCC 33806] gi|224945486|gb|EEG26695.1| hypothetical protein CORMATOL_01818 [Corynebacterium matruchotii ATCC 33806] Length=664 Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 191/615 (32%), Positives = 312/615 (51%), Gaps = 35/615 (5%) Query 7 LGMVLTILAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRL 66 +G+ LA + G +LS VTD AG L+ ++++L D R + Sbjct 5 IGISPFALAGERVFVQAQGTSTATKLSMGVTDQAGRLSQEE----IDSINKLAQDYRHKT 60 Query 67 ----WVVYVENFS-GQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVSE 121 ++V+V++F G A WA + + YD LLAV + YA+ A S Sbjct 61 DGIAYIVFVDSFPPGMDAQEWATQALKPIAASRYDILLAVGSNTYGYAY--SEAFTAKSF 118 Query 122 GQVDNVRRYQIEPALHDGDYSGAA---VAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVL 178 QVD + L D++GAA + A + SSS VG +++ + Sbjct 119 KQVDTA----VVSHLRQHDWAGAASSFITTAQQVAAGGSSSGDSKGSAAVGAAILLGGLG 174 Query 179 ---------LVVMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDN 229 + + +++R A + R +DP + AL+ + AL+ L+ +V D Sbjct 175 LLGAAGGGAVYAAKRKSKRDTAKAVEQGRALDPKDTAALSQLSTAALEQLAAEELVSTDE 234 Query 230 AVRTSTNELALAIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELL 289 +++ + EL +++ EFG RT FTQA+ ++++ L +AF ++QQ++D + +R LL Sbjct 235 SIKAAQAELDISVGEFGTERTRKFTQALQHSQSTLQKAFAIQQQINDRKYTSEFDKRSLL 294 Query 290 TRVIVSAAHADRELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELH 349 +I S AD L + + F +R+L++NAP L+ LTQ V+L RI P +++A+L Sbjct 295 IEIISSCGQADDVLDQEAKNFADMRNLLVNAPQTLERLTQSTVDLQARITPAMEQMADLR 354 Query 350 TEFDAAAMTSIAGNVTTATERLAFADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQ 409 F A ++SI NV A LA A++ I RDLA + +G QAGL++A+R AE+ + Q Sbjct 355 RSFPAETLSSINHNVEIAQAALAEAEKQIDVGRDLAARP-AGEQAGLIEAIRIAETDINQ 413 Query 410 ARALLDAVDSAATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDA 469 A +L A++SA +DI A A+L A++A+I+ I A ++Q G D A + Sbjct 414 ADRMLKAIESARSDIAAAQANLDALIAEIEGEI--AQGEAIKSQGVAQGTQLDWNAVSNT 471 Query 470 AAR---ALDRARGAA--DPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFT 524 R AL ARG DPLTA+ +LT +D+ LD +L + R+ R +Q Sbjct 472 LTRAREALQEARGIKDHDPLTAWTRLTDMDSQLDEMLEQIQSGITDHARVLRVFDQQSAA 531 Query 525 AESRVRAVSEYIDTRRGSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAA 584 A++ +RA ++I +R + +ART+LA+A++ E A ++S +AI YA A+T A Sbjct 532 AQTAIRAAQDFISSRGRYVRSDARTKLADAEQAFEKAVAVRTSQTRDAINYARHATTQAQ 591 Query 585 HAQSLANADVQSAQR 599 A +A DV S R Sbjct 592 AALRVAQRDVDSEMR 606 Lambda K H 0.317 0.129 0.354 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1540123365440 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40