BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2352c
Length=391
Score E
Sequences producing significant alignments: (Bits) Value
gi|15841861|ref|NP_336898.1| PPE family protein [Mycobacterium t... 725 0.0
gi|167969910|ref|ZP_02552187.1| PPE family protein [Mycobacteriu... 725 0.0
gi|340627363|ref|YP_004745815.1| PPE family protein [Mycobacteri... 724 0.0
gi|297634951|ref|ZP_06952731.1| PPE family protein [Mycobacteriu... 720 0.0
gi|326903969|gb|EGE50902.1| LOW QUALITY PROTEIN: PPE family prot... 687 0.0
gi|289745622|ref|ZP_06505000.1| PPE family protein [Mycobacteriu... 687 0.0
gi|294994545|ref|ZP_06800236.1| PPE family protein [Mycobacteriu... 669 0.0
gi|289575045|ref|ZP_06455272.1| PPE family protein [Mycobacteriu... 500 1e-139
gi|15841864|ref|NP_336901.1| PPE family protein [Mycobacterium t... 493 2e-137
gi|254551401|ref|ZP_05141848.1| PPE family protein [Mycobacteriu... 457 1e-126
gi|289762519|ref|ZP_06521897.1| ppe family protein [Mycobacteriu... 446 3e-123
gi|339298873|gb|AEJ50983.1| PPE family protein [Mycobacterium tu... 446 5e-123
gi|254551400|ref|ZP_05141847.1| PPE family protein [Mycobacteriu... 438 7e-121
gi|183983641|ref|YP_001851932.1| PPE family protein [Mycobacteri... 382 5e-104
gi|183983644|ref|YP_001851935.1| PPE family protein [Mycobacteri... 382 7e-104
gi|15842698|ref|NP_337735.1| PPE family protein [Mycobacterium t... 367 3e-99
gi|31794300|ref|NP_856793.1| PPE family protein [Mycobacterium b... 365 6e-99
gi|306777439|ref|ZP_07415776.1| PPE family protein [Mycobacteriu... 364 1e-98
gi|183984295|ref|YP_001852586.1| PPE family protein, PPE49 [Myco... 341 1e-91
gi|240170236|ref|ZP_04748895.1| PPE family protein, PPE49 [Mycob... 328 7e-88
gi|308370157|ref|ZP_07666873.1| putative PPE family protein [Myc... 320 3e-85
gi|240170238|ref|ZP_04748897.1| PPE family protein [Mycobacteriu... 317 3e-84
gi|167966621|ref|ZP_02548898.1| PPE family protein [Mycobacteriu... 307 2e-81
gi|308370986|ref|ZP_07423462.2| putative PPE family protein [Myc... 296 4e-78
gi|289758477|ref|ZP_06517855.1| predicted protein [Mycobacterium... 292 5e-77
gi|306785136|ref|ZP_07423458.1| PPE family protein [Mycobacteriu... 288 2e-75
gi|121639007|ref|YP_979231.1| PPE family protein [Mycobacterium ... 282 6e-74
gi|306799075|ref|ZP_07437377.1| putative PPE family protein [Myc... 263 3e-68
gi|306776613|ref|ZP_07414950.1| PPE family protein [Mycobacteriu... 254 1e-65
gi|306972727|ref|ZP_07485388.1| putative PPE family protein [Myc... 251 1e-64
gi|307080432|ref|ZP_07489602.1| PPE family protein [Mycobacteriu... 243 4e-62
gi|342857484|ref|ZP_08714140.1| hypothetical protein MCOL_01370 ... 229 8e-58
gi|296166320|ref|ZP_06848757.1| PPE13 protein [Mycobacterium par... 219 8e-55
gi|254774763|ref|ZP_05216279.1| hypothetical protein MaviaA2_088... 218 1e-54
gi|41408234|ref|NP_961070.1| hypothetical protein MAP2136c [Myco... 215 9e-54
gi|333990650|ref|YP_004523264.1| PPE family protein [Mycobacteri... 185 9e-45
gi|240169037|ref|ZP_04747696.1| PPE family protein [Mycobacteriu... 181 2e-43
gi|342861307|ref|ZP_08717955.1| PPE family protein [Mycobacteriu... 174 2e-41
gi|294996719|ref|ZP_06802410.1| PPE family protein [Mycobacteriu... 174 2e-41
gi|240171260|ref|ZP_04749919.1| PPE family protein [Mycobacteriu... 174 2e-41
gi|308372058|ref|ZP_07427232.2| putative PPE family protein [Myc... 174 2e-41
gi|167967397|ref|ZP_02549674.1| PPE family protein [Mycobacteriu... 174 3e-41
gi|212595976|gb|ACJ35541.1| PPE16 [Mycobacterium avium subsp. av... 173 6e-41
gi|118466099|ref|YP_881935.1| PPE family protein [Mycobacterium ... 173 6e-41
gi|31792997|ref|NP_855490.1| PPE family protein [Mycobacterium b... 172 6e-41
gi|57116921|ref|YP_177844.1| PPE family protein [Mycobacterium t... 172 7e-41
gi|240167823|ref|ZP_04746482.1| PPE family protein, PPE18 [Mycob... 172 8e-41
gi|336457435|gb|EGO36444.1| PPE-repeat containing protein [Mycob... 171 2e-40
gi|254821012|ref|ZP_05226013.1| PPE family protein, PPE31 [Mycob... 171 2e-40
gi|183981114|ref|YP_001849405.1| PPE family protein [Mycobacteri... 166 5e-39
>gi|15841861|ref|NP_336898.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|57116974|ref|YP_177870.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|148662181|ref|YP_001283704.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
67 more sequence titles
Length=391
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/391 (100%), Positives = 391/391 (100%), Gaps = 0/391 (0%)
Query 1 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 60
MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS
Sbjct 1 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 60
Query 61 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 120
GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG
Sbjct 61 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 120
Query 121 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL 180
ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL
Sbjct 121 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL 180
Query 181 ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA 240
ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA
Sbjct 181 ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA 240
Query 241 SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSA 300
SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSA
Sbjct 241 SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSA 300
Query 301 ELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAG 360
ELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAG
Sbjct 301 ELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAG 360
Query 361 AGMPAGMMGRGGANPHVVQARPSVVPRVGIG 391
AGMPAGMMGRGGANPHVVQARPSVVPRVGIG
Sbjct 361 AGMPAGMMGRGGANPHVVQARPSVVPRVGIG 391
>gi|167969910|ref|ZP_02552187.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|289575048|ref|ZP_06455275.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|289539479|gb|EFD44057.1| PPE family protein [Mycobacterium tuberculosis K85]
Length=406
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/391 (100%), Positives = 391/391 (100%), Gaps = 0/391 (0%)
Query 1 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 60
MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS
Sbjct 16 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 75
Query 61 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 120
GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG
Sbjct 76 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 135
Query 121 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL 180
ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL
Sbjct 136 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL 195
Query 181 ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA 240
ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA
Sbjct 196 ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA 255
Query 241 SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSA 300
SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSA
Sbjct 256 SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSA 315
Query 301 ELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAG 360
ELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAG
Sbjct 316 ELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAG 375
Query 361 AGMPAGMMGRGGANPHVVQARPSVVPRVGIG 391
AGMPAGMMGRGGANPHVVQARPSVVPRVGIG
Sbjct 376 AGMPAGMMGRGGANPHVVQARPSVVPRVGIG 406
>gi|340627363|ref|YP_004745815.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|340627365|ref|YP_004745817.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|340005553|emb|CCC44715.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|340005555|emb|CCC44717.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
Length=391
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/391 (99%), Positives = 391/391 (100%), Gaps = 0/391 (0%)
Query 1 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 60
MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS
Sbjct 1 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 60
Query 61 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 120
GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG
Sbjct 61 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 120
Query 121 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL 180
ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL
Sbjct 121 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL 180
Query 181 ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA 240
ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA
Sbjct 181 ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA 240
Query 241 SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSA 300
SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSA
Sbjct 241 SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSA 300
Query 301 ELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAG 360
ELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMP+PMGMGGAG
Sbjct 301 ELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPLPMGMGGAG 360
Query 361 AGMPAGMMGRGGANPHVVQARPSVVPRVGIG 391
AGMPAGMMGRGGANPHVVQARPSVVPRVGIG
Sbjct 361 AGMPAGMMGRGGANPHVVQARPSVVPRVGIG 391
>gi|297634951|ref|ZP_06952731.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
Length=389
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/389 (99%), Positives = 389/389 (100%), Gaps = 0/389 (0%)
Query 3 LDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGP 62
+DFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGP
Sbjct 1 MDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGP 60
Query 63 ASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGAL 122
ASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGAL
Sbjct 61 ASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGAL 120
Query 123 VATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGLAS 182
VATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGLAS
Sbjct 121 VATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGLAS 180
Query 183 QAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPASM 242
QAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPASM
Sbjct 181 QAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPASM 240
Query 243 LIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSAEL 302
LIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSAEL
Sbjct 241 LIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSAEL 300
Query 303 GKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAGAG 362
GKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAGAG
Sbjct 301 GKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAGAG 360
Query 363 MPAGMMGRGGANPHVVQARPSVVPRVGIG 391
MPAGMMGRGGANPHVVQARPSVVPRVGIG
Sbjct 361 MPAGMMGRGGANPHVVQARPSVVPRVGIG 389
>gi|326903969|gb|EGE50902.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis
W-148]
Length=374
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/374 (100%), Positives = 374/374 (100%), Gaps = 0/374 (0%)
Query 18 YAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGPASVAMAGAAAPYVGW 77
YAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGPASVAMAGAAAPYVGW
Sbjct 1 YAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGPASVAMAGAAAPYVGW 60
Query 78 LSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGALVATNILGQNTPAIAA 137
LSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGALVATNILGQNTPAIAA
Sbjct 61 LSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGALVATNILGQNTPAIAA 120
Query 138 TEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGLASQAGAQLTGMATSVSA 197
TEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGLASQAGAQLTGMATSVSA
Sbjct 121 TEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGLASQAGAQLTGMATSVSA 180
Query 198 ALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPASMLIGPMMQLAQMGTTA 257
ALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPASMLIGPMMQLAQMGTTA
Sbjct 181 ALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPASMLIGPMMQLAQMGTTA 240
Query 258 NTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTW 317
NTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTW
Sbjct 241 NTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTW 300
Query 318 EGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAGAGMPAGMMGRGGANPHV 377
EGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAGAGMPAGMMGRGGANPHV
Sbjct 301 EGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAGAGMPAGMMGRGGANPHV 360
Query 378 VQARPSVVPRVGIG 391
VQARPSVVPRVGIG
Sbjct 361 VQARPSVVPRVGIG 374
>gi|289745622|ref|ZP_06505000.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
gi|289686150|gb|EFD53638.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
Length=392
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/374 (100%), Positives = 374/374 (100%), Gaps = 0/374 (0%)
Query 18 YAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGPASVAMAGAAAPYVGW 77
YAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGPASVAMAGAAAPYVGW
Sbjct 19 YAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGPASVAMAGAAAPYVGW 78
Query 78 LSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGALVATNILGQNTPAIAA 137
LSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGALVATNILGQNTPAIAA
Sbjct 79 LSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGALVATNILGQNTPAIAA 138
Query 138 TEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGLASQAGAQLTGMATSVSA 197
TEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGLASQAGAQLTGMATSVSA
Sbjct 139 TEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGLASQAGAQLTGMATSVSA 198
Query 198 ALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPASMLIGPMMQLAQMGTTA 257
ALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPASMLIGPMMQLAQMGTTA
Sbjct 199 ALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPASMLIGPMMQLAQMGTTA 258
Query 258 NTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTW 317
NTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTW
Sbjct 259 NTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTW 318
Query 318 EGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAGAGMPAGMMGRGGANPHV 377
EGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAGAGMPAGMMGRGGANPHV
Sbjct 319 EGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAGAGMPAGMMGRGGANPHV 378
Query 378 VQARPSVVPRVGIG 391
VQARPSVVPRVGIG
Sbjct 379 VQARPSVVPRVGIG 392
>gi|294994545|ref|ZP_06800236.1| PPE family protein [Mycobacterium tuberculosis 210]
gi|339295254|gb|AEJ47365.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length=364
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/364 (100%), Positives = 364/364 (100%), Gaps = 0/364 (0%)
Query 28 MAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGPASVAMAGAAAPYVGWLSAAAGQAEL 87
MAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGPASVAMAGAAAPYVGWLSAAAGQAEL
Sbjct 1 MAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGPASVAMAGAAAPYVGWLSAAAGQAEL 60
Query 88 SAGQATAAATAFEAALAATVHPAAVTANRVLLGALVATNILGQNTPAIAATEFDYVEMWA 147
SAGQATAAATAFEAALAATVHPAAVTANRVLLGALVATNILGQNTPAIAATEFDYVEMWA
Sbjct 61 SAGQATAAATAFEAALAATVHPAAVTANRVLLGALVATNILGQNTPAIAATEFDYVEMWA 120
Query 148 QDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGLASQAGAQLTGMATSVSAALSPIAEGAV 207
QDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGLASQAGAQLTGMATSVSAALSPIAEGAV
Sbjct 121 QDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGLASQAGAQLTGMATSVSAALSPIAEGAV 180
Query 208 EGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPASMLIGPMMQLAQMGTTANTAGLAGAEA 267
EGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPASMLIGPMMQLAQMGTTANTAGLAGAEA
Sbjct 181 EGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPASMLIGPMMQLAQMGTTANTAGLAGAEA 240
Query 268 AGLAAADVPTFAGDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTWEGSVPARMAS 327
AGLAAADVPTFAGDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTWEGSVPARMAS
Sbjct 241 AGLAAADVPTFAGDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTWEGSVPARMAS 300
Query 328 SAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAGAGMPAGMMGRGGANPHVVQARPSVVPR 387
SAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAGAGMPAGMMGRGGANPHVVQARPSVVPR
Sbjct 301 SAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAGAGMPAGMMGRGGANPHVVQARPSVVPR 360
Query 388 VGIG 391
VGIG
Sbjct 361 VGIG 364
>gi|289575045|ref|ZP_06455272.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|289539476|gb|EFD44054.1| PPE family protein [Mycobacterium tuberculosis K85]
Length=389
Score = 500 bits (1288), Expect = 1e-139, Method: Compositional matrix adjust.
Identities = 385/391 (99%), Positives = 385/391 (99%), Gaps = 2/391 (0%)
Query 1 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 60
MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS
Sbjct 1 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 60
Query 61 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 120
GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG
Sbjct 61 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 120
Query 121 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL 180
ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL
Sbjct 121 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL 180
Query 181 ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA 240
ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA
Sbjct 181 ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA 240
Query 241 SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSA 300
SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSA
Sbjct 241 SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSA 300
Query 301 ELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAG 360
ELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAG M MPMGMGGAG
Sbjct 301 ELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAG--GPMGMMPMGMGGAG 358
Query 361 AGMPAGMMGRGGANPHVVQARPSVVPRVGIG 391
AGMPAGMMGRGGANPHVVQARPSVVPRVGIG
Sbjct 359 AGMPAGMMGRGGANPHVVQARPSVVPRVGIG 389
>gi|15841864|ref|NP_336901.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|13882130|gb|AAK46715.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
Length=415
Score = 493 bits (1269), Expect = 2e-137, Method: Compositional matrix adjust.
Identities = 378/391 (97%), Positives = 378/391 (97%), Gaps = 7/391 (1%)
Query 1 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 60
MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS
Sbjct 32 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 91
Query 61 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 120
GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG
Sbjct 92 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 151
Query 121 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL 180
ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL
Sbjct 152 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL 211
Query 181 ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA 240
ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA
Sbjct 212 ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA 271
Query 241 SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSA 300
SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSA
Sbjct 272 SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSA 331
Query 301 ELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAG 360
ELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAG PMGM
Sbjct 332 ELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAG-------GPMGMMPMP 384
Query 361 AGMPAGMMGRGGANPHVVQARPSVVPRVGIG 391
GMPAGMMGRGGANPHVVQARPSVVPRVGIG
Sbjct 385 MGMPAGMMGRGGANPHVVQARPSVVPRVGIG 415
>gi|254551401|ref|ZP_05141848.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=261
Score = 457 bits (1176), Expect = 1e-126, Method: Compositional matrix adjust.
Identities = 246/246 (100%), Positives = 246/246 (100%), Gaps = 0/246 (0%)
Query 1 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 60
MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS
Sbjct 16 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 75
Query 61 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 120
GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG
Sbjct 76 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 135
Query 121 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL 180
ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL
Sbjct 136 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL 195
Query 181 ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA 240
ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA
Sbjct 196 ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA 255
Query 241 SMLIGP 246
SMLIGP
Sbjct 256 SMLIGP 261
>gi|289762519|ref|ZP_06521897.1| ppe family protein [Mycobacterium tuberculosis GM 1503]
gi|289710025|gb|EFD74041.1| ppe family protein [Mycobacterium tuberculosis GM 1503]
Length=373
Score = 446 bits (1147), Expect = 3e-123, Method: Compositional matrix adjust.
Identities = 352/352 (100%), Positives = 352/352 (100%), Gaps = 0/352 (0%)
Query 40 LRASASSFDAVIAGLAAGPWSGPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAF 99
LRASASSFDAVIAGLAAGPWSGPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAF
Sbjct 22 LRASASSFDAVIAGLAAGPWSGPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAF 81
Query 100 EAALAATVHPAAVTANRVLLGALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAG 159
EAALAATVHPAAVTANRVLLGALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAG
Sbjct 82 EAALAATVHPAAVTANRVLLGALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAG 141
Query 160 AAAVAETLTPFSVPPLDLAGLASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQS 219
AAAVAETLTPFSVPPLDLAGLASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQS
Sbjct 142 AAAVAETLTPFSVPPLDLAGLASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQS 201
Query 220 VAAGLPVDAALQVGQAAAYPASMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFA 279
VAAGLPVDAALQVGQAAAYPASMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFA
Sbjct 202 VAAGLPVDAALQVGQAAAYPASMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFA 261
Query 280 GDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAE 339
GDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAE
Sbjct 262 GDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAE 321
Query 340 VPAAGGPMGMMPMPMGMGGAGAGMPAGMMGRGGANPHVVQARPSVVPRVGIG 391
VPAAGGPMGMMPMPMGMGGAGAGMPAGMMGRGGANPHVVQARPSVVPRVGIG
Sbjct 322 VPAAGGPMGMMPMPMGMGGAGAGMPAGMMGRGGANPHVVQARPSVVPRVGIG 373
>gi|339298873|gb|AEJ50983.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length=437
Score = 446 bits (1146), Expect = 5e-123, Method: Compositional matrix adjust.
Identities = 334/345 (97%), Positives = 334/345 (97%), Gaps = 0/345 (0%)
Query 18 YAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGPASVAMAGAAAPYVGW 77
YAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGPASVAMAGAAAPYVGW
Sbjct 19 YAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGPASVAMAGAAAPYVGW 78
Query 78 LSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGALVATNILGQNTPAIAA 137
LSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGALVATNILGQNTPAIAA
Sbjct 79 LSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGALVATNILGQNTPAIAA 138
Query 138 TEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGLASQAGAQLTGMATSVSA 197
TEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGLASQAGAQLTGMATSVSA
Sbjct 139 TEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGLASQAGAQLTGMATSVSA 198
Query 198 ALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPASMLIGPMMQLAQMGTTA 257
ALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPASMLIGPMMQLAQMGTTA
Sbjct 199 ALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPASMLIGPMMQLAQMGTTA 258
Query 258 NTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTW 317
NTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTW
Sbjct 259 NTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTW 318
Query 318 EGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAGAG 362
EGSVPARMASSAMAGLGAMPAEVPAAGGP G G GG G
Sbjct 319 EGSVPARMASSAMAGLGAMPAEVPAAGGPHGDDADADGYGGCWGG 363
>gi|254551400|ref|ZP_05141847.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=239
Score = 438 bits (1127), Expect = 7e-121, Method: Compositional matrix adjust.
Identities = 239/239 (100%), Positives = 239/239 (100%), Gaps = 0/239 (0%)
Query 153 MVGYHAGAAAVAETLTPFSVPPLDLAGLASQAGAQLTGMATSVSAALSPIAEGAVEGVPA 212
MVGYHAGAAAVAETLTPFSVPPLDLAGLASQAGAQLTGMATSVSAALSPIAEGAVEGVPA
Sbjct 1 MVGYHAGAAAVAETLTPFSVPPLDLAGLASQAGAQLTGMATSVSAALSPIAEGAVEGVPA 60
Query 213 VVAAAQSVAAGLPVDAALQVGQAAAYPASMLIGPMMQLAQMGTTANTAGLAGAEAAGLAA 272
VVAAAQSVAAGLPVDAALQVGQAAAYPASMLIGPMMQLAQMGTTANTAGLAGAEAAGLAA
Sbjct 61 VVAAAQSVAAGLPVDAALQVGQAAAYPASMLIGPMMQLAQMGTTANTAGLAGAEAAGLAA 120
Query 273 ADVPTFAGDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTWEGSVPARMASSAMAG 332
ADVPTFAGDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTWEGSVPARMASSAMAG
Sbjct 121 ADVPTFAGDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTWEGSVPARMASSAMAG 180
Query 333 LGAMPAEVPAAGGPMGMMPMPMGMGGAGAGMPAGMMGRGGANPHVVQARPSVVPRVGIG 391
LGAMPAEVPAAGGPMGMMPMPMGMGGAGAGMPAGMMGRGGANPHVVQARPSVVPRVGIG
Sbjct 181 LGAMPAEVPAAGGPMGMMPMPMGMGGAGAGMPAGMMGRGGANPHVVQARPSVVPRVGIG 239
>gi|183983641|ref|YP_001851932.1| PPE family protein [Mycobacterium marinum M]
gi|183176967|gb|ACC42077.1| PPE family protein [Mycobacterium marinum M]
Length=387
Score = 382 bits (982), Expect = 5e-104, Method: Compositional matrix adjust.
Identities = 283/391 (73%), Positives = 329/391 (85%), Gaps = 4/391 (1%)
Query 1 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 60
MILDF+WLPPEINSARI++GAGSGPL MAAAAW+GLAADL ASA+SF++VI+ LA+GPWS
Sbjct 1 MILDFAWLPPEINSARIFSGAGSGPLHMAAAAWQGLAADLAASAASFNSVISSLASGPWS 60
Query 61 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 120
GPASV+MA AAAPYVGWL AAAGQA +A QA AATAFE AL+ATVHPAAVTANR L
Sbjct 61 GPASVSMAAAAAPYVGWLDAAAGQAAAAASQARVAATAFETALSATVHPAAVTANRTSLV 120
Query 121 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL 180
+L+ TN LGQNTPAIAATEFDYVEMWAQDVGAMVGY AGA +VA LTPFS+PPLDLAGL
Sbjct 121 SLITTNFLGQNTPAIAATEFDYVEMWAQDVGAMVGYDAGATSVAAALTPFSIPPLDLAGL 180
Query 181 ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA 240
A+ AQ+ G+AT+++AA+SP AEGA+ G+P VVA QS AA +P+D+ + V Q YPA
Sbjct 181 AAGINAQVAGVATAMTAAISPAAEGAIAGLPGVVAGVQSAAAAVPLDSVMSVAQIGMYPA 240
Query 241 SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSA 300
SML+GP+MQL G++ANTAGLAGA+AAGLAAAD+P D S G GLGAGM+A
Sbjct 241 SMLMGPLMQL---GSSANTAGLAGAQAAGLAAADMPKMV-DAISPMKGLGGAGLGAGMAA 296
Query 301 ELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAG 360
+LGKARLVGAMSVPPTWEGS+P +++SAMAGLGAMP A G PMGMMPMPMGMGGAG
Sbjct 297 DLGKARLVGAMSVPPTWEGSIPKGLSTSAMAGLGAMPEVAGAGGAPMGMMPMPMGMGGAG 356
Query 361 AGMPAGMMGRGGANPHVVQARPSVVPRVGIG 391
AGMP GM+GRGGA+PHVVQ+RPSVVPR+G+G
Sbjct 357 AGMPGGMLGRGGASPHVVQSRPSVVPRIGVG 387
>gi|183983644|ref|YP_001851935.1| PPE family protein [Mycobacterium marinum M]
gi|183176970|gb|ACC42080.1| PPE family protein [Mycobacterium marinum M]
Length=388
Score = 382 bits (980), Expect = 7e-104, Method: Compositional matrix adjust.
Identities = 279/392 (72%), Positives = 327/392 (84%), Gaps = 5/392 (1%)
Query 1 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 60
MILDF+WLPPEINSARI++GAGSGPL MAAAAW+GLAADL ASA+SF++VI+ LA+GPWS
Sbjct 1 MILDFAWLPPEINSARIFSGAGSGPLHMAAAAWQGLAADLAASAASFNSVISSLASGPWS 60
Query 61 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 120
GPASV+MA AAAPYVGWL AAAGQA +A QA AATAFE AL+ATVHPAAVTANR L
Sbjct 61 GPASVSMAAAAAPYVGWLDAAAGQAAAAASQARVAATAFETALSATVHPAAVTANRTSLV 120
Query 121 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL 180
+L+ TN LGQNTPAIAATEFDYVEMWAQDVGAMVGY AGA +VA LTPFS+PPLDLAGL
Sbjct 121 SLITTNFLGQNTPAIAATEFDYVEMWAQDVGAMVGYDAGATSVAAALTPFSIPPLDLAGL 180
Query 181 ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA 240
A+ AQ+ G+AT+++AA+SP A+GA+ G+P VVA QS AA +P+ + +QV Q YPA
Sbjct 181 AAGINAQVAGVATAMTAAISPAAQGAIAGLPGVVAGVQSAAAAVPLQSVMQVAQIGMYPA 240
Query 241 SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSA 300
SM++ PMMQL +AN+AGLAG +AAG AAAD+P D S G GLGAGM+A
Sbjct 241 SMMMSPMMQLLN---SANSAGLAGTQAAGFAAADMPKMV-DAVSPMKGLGGAGLGAGMAA 296
Query 301 ELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAG-GPMGMMPMPMGMGGA 359
+LGKARLVGAMSVPPTWEGS+P +++SAMAGLGAMPAE+ AG PMGMMPMPMGMGGA
Sbjct 297 DLGKARLVGAMSVPPTWEGSIPKGLSTSAMAGLGAMPAEIAEAGRAPMGMMPMPMGMGGA 356
Query 360 GAGMPAGMMGRGGANPHVVQARPSVVPRVGIG 391
GAGMP GM+GRGGA+PHVVQ+RPSVVPR+G+G
Sbjct 357 GAGMPGGMLGRGGASPHVVQSRPSVVPRIGVG 388
>gi|15842698|ref|NP_337735.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|57117062|ref|YP_177932.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|148662979|ref|YP_001284502.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
56 more sequence titles
Length=391
Score = 367 bits (941), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 249/398 (63%), Positives = 297/398 (75%), Gaps = 14/398 (3%)
Query 1 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 60
M+L FSWLPPEINSAR++AGAGSGPLF AA+AWEGLAADL ASASSF++V+A L GPW+
Sbjct 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWT 60
Query 61 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 120
GPAS++MA AA+PYVGWLS A QA+L+A QA AAATAFEAALAATVHP AVTANRV L
Sbjct 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
Query 121 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL 180
+L+A N+LGQNTPAIAATEFDY+EMWAQDV AMVGYHAGA +VA TL PFS+PP+ LAGL
Sbjct 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL 180
Query 181 ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA 240
A+Q G Q+ GMAT+ SAA++P+ EGA+ VP V++ QS+ + LP LQ P
Sbjct 181 AAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLP----LQHASMLFLPV 236
Query 241 SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAG-DIASGTGLGGAGGLGAGMS 299
+L P+ LA M +A G A GLAAA+ P +G I + LGG LGAGMS
Sbjct 237 RILTSPITTLASMAR--ESATRLGPPAGGLAAANTPNPSGAAIPAFKPLGGR-ELGAGMS 293
Query 300 AELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEV------PAAGGPMGMMPMP 353
A LG+A+LVG+MSVPPTW+GS+P MASSAM+GLG P V AAGG M MM MP
Sbjct 294 AGLGQAQLVGSMSVPPTWQGSIPISMASSAMSGLGVPPNPVALTQAAGAAGGGMPMMLMP 353
Query 354 MGMGGAGAGMPAGMMGRGGANPHVVQARPSVVPRVGIG 391
M + GAGAGMP G+M R GA HV QAR +V+PR G+G
Sbjct 354 MSISGAGAGMPGGLMDRDGAGWHVTQARLTVIPRTGVG 391
>gi|31794300|ref|NP_856793.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|31619896|emb|CAD95240.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=391
Score = 365 bits (937), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 248/398 (63%), Positives = 296/398 (75%), Gaps = 14/398 (3%)
Query 1 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 60
M+L FSWLPPEINSAR++AGAGSGPLF AA+AWEGLA DL ASASSF++V+A L GPW+
Sbjct 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAVDLWASASSFESVLAALTTGPWT 60
Query 61 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 120
GPAS++MA AA+PYVGWLS A QA+L+A QA AAATAFEAALAATVHP AVTANRV L
Sbjct 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
Query 121 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL 180
+L+A N+LGQNTPAIAATEFDY+EMWAQDV AMVGYHAGA +VA TL PFS+PP+ LAGL
Sbjct 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL 180
Query 181 ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA 240
A+Q G Q+ GMAT+ SAA++P+ EGA+ VP V++ QS+ + LP LQ P
Sbjct 181 AAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLP----LQHASMLFLPV 236
Query 241 SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAG-DIASGTGLGGAGGLGAGMS 299
+L P+ LA M +A G A GLAAA+ P +G I + LGG LGAGMS
Sbjct 237 RILTSPITTLASMAR--ESATRLGPPAGGLAAANTPNPSGAAIPAFKPLGGR-ELGAGMS 293
Query 300 AELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEV------PAAGGPMGMMPMP 353
A LG+A+LVG+MSVPPTW+GS+P MASSAM+GLG P V AAGG M MM MP
Sbjct 294 AGLGQAQLVGSMSVPPTWQGSIPISMASSAMSGLGVPPNPVALTQAAGAAGGGMPMMLMP 353
Query 354 MGMGGAGAGMPAGMMGRGGANPHVVQARPSVVPRVGIG 391
M + GAGAGMP G+M R GA HV QAR +V+PR G+G
Sbjct 354 MSISGAGAGMPGGLMDRDGAGWHVTQARLTVIPRTGVG 391
>gi|306777439|ref|ZP_07415776.1| PPE family protein [Mycobacterium tuberculosis SUMu001]
gi|306973558|ref|ZP_07486219.1| PPE family protein [Mycobacterium tuberculosis SUMu010]
gi|307081266|ref|ZP_07490436.1| PPE family protein [Mycobacterium tuberculosis SUMu011]
gi|308214155|gb|EFO73554.1| PPE family protein [Mycobacterium tuberculosis SUMu001]
gi|308357045|gb|EFP45896.1| PPE family protein [Mycobacterium tuberculosis SUMu010]
gi|308361000|gb|EFP49851.1| PPE family protein [Mycobacterium tuberculosis SUMu011]
Length=391
Score = 364 bits (935), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 248/398 (63%), Positives = 296/398 (75%), Gaps = 14/398 (3%)
Query 1 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 60
M+L FSWLPPEINSAR++AGAGSGPLF AA+AWEGLAADL ASASSF++V+A L GPW+
Sbjct 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWT 60
Query 61 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 120
GPAS++MA AA+PYVGWLS A QA+L+A QA AAATAFEAALAATVHP AVTANRV L
Sbjct 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
Query 121 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL 180
+L+A N+LGQNTPAIAATEFDY+EMWAQDV AMVGYHAGA +VA TL PFS+PP+ LAGL
Sbjct 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL 180
Query 181 ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA 240
A+Q G Q+ GMAT+ SAA++P+ EGA+ VP V++ QS+ + LP LQ P
Sbjct 181 AAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLP----LQHASMLFLPV 236
Query 241 SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAG-DIASGTGLGGAGGLGAGMS 299
+L P+ LA M +A G A GLAAA+ P +G I + LGG LGAGMS
Sbjct 237 RILTSPITTLASMAR--ESATRLGPPAGGLAAANTPNPSGAAIPAFKPLGGR-ELGAGMS 293
Query 300 AELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEV------PAAGGPMGMMPMP 353
A LG+A+LVG+MSVPPTW+GS+P MASSAM+G G P V AAGG M MM MP
Sbjct 294 AGLGQAQLVGSMSVPPTWQGSIPISMASSAMSGWGVPPNPVALTQAAGAAGGGMPMMLMP 353
Query 354 MGMGGAGAGMPAGMMGRGGANPHVVQARPSVVPRVGIG 391
M + GAGAGMP G+M R GA HV QAR +V+PR G+G
Sbjct 354 MSISGAGAGMPGGLMDRDGAGWHVTQARLTVIPRTGVG 391
>gi|183984295|ref|YP_001852586.1| PPE family protein, PPE49 [Mycobacterium marinum M]
gi|183177621|gb|ACC42731.1| PPE family protein, PPE49 [Mycobacterium marinum M]
Length=389
Score = 341 bits (875), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 248/398 (63%), Positives = 294/398 (74%), Gaps = 16/398 (4%)
Query 1 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 60
M+LDF+WLPPEINS RI++GAGSGPLF AA+AWEGLA DL ASASSFD+V++GL++G WS
Sbjct 1 MMLDFAWLPPEINSTRIFSGAGSGPLFAAASAWEGLAQDLYASASSFDSVVSGLSSGSWS 60
Query 61 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 120
GPASV+MA AAAPYVGWLSAAAGQAE +A QA AATAFEAAL+ATVHPAAVTANR+ L
Sbjct 61 GPASVSMAAAAAPYVGWLSAAAGQAESAANQARTAATAFEAALSATVHPAAVTANRMSLV 120
Query 121 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL 180
+LVATNILGQNTPAIAA EFDY+EMWAQDV AMVGYH GA++VA L PFS+PP+DLAGL
Sbjct 121 SLVATNILGQNTPAIAANEFDYLEMWAQDVAAMVGYHGGASSVAAALVPFSLPPVDLAGL 180
Query 181 ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA 240
ASQ G Q GM TS S+AL+ + + VP + QS LP LQ YP
Sbjct 181 ASQIGTQAFGMVTSASSALATPVQSVMAAVPTALTTLQS----LP----LQDASMLMYPF 232
Query 241 SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSA 300
SM + P+M L +TAG+AGA AAG+ A+ ++ +GGA GLG+ +SA
Sbjct 233 SMAMSPLMNLMSSSLRGSTAGVAGATAAGIPASAAKLVDAPVSGVKAMGGA-GLGSSISA 291
Query 301 ELGKARLVGAMSVPPTWEGSVPARMASSAMAGLG----AMPAEVPAAG---GPMGMMPMP 353
LGKAR+VGA+SVPPTWEGS+P RMASSAM+GLG A AE+ AAG G M
Sbjct 292 GLGKARMVGAVSVPPTWEGSMPTRMASSAMSGLGAAGVANEAEMAAAGRPAGMPMMPMPM 351
Query 354 MGMGGAGAGMPAGMMGRGGANPHVVQARPSVVPRVGIG 391
GAG GMP GM+GRGGA+P+ +Q+RPSVVPR GIG
Sbjct 352 GAGAGAGGGMPGGMLGRGGASPNPIQSRPSVVPRTGIG 389
>gi|240170236|ref|ZP_04748895.1| PPE family protein, PPE49 [Mycobacterium kansasii ATCC 12478]
Length=388
Score = 328 bits (842), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 241/402 (60%), Positives = 283/402 (71%), Gaps = 25/402 (6%)
Query 1 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 60
MI +F+WLPPE+NSARI+AGAGSGPL AA+AWE LAADLRASA+SFD+V++GLAAGPWS
Sbjct 1 MIPEFAWLPPEVNSARIFAGAGSGPLHTAASAWESLAADLRASAASFDSVVSGLAAGPWS 60
Query 61 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 120
GPASV+MA AA PYVGWLS AAG+AE +A QA AAAT FEAAL+ATVHPAAVTANRV +
Sbjct 61 GPASVSMAAAATPYVGWLSGAAGEAESAAVQARAAATVFEAALSATVHPAAVTANRVSVL 120
Query 121 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLD---L 177
+LVATN LGQNTPAIAA E DY+EMWAQDV AMVGY AGA +VA TLTPFS+PPL L
Sbjct 121 SLVATNFLGQNTPAIAAAEGDYLEMWAQDVAAMVGYQAGATSVASTLTPFSLPPLTMAGL 180
Query 178 AGLASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAA 237
AGLASQA + +T +A+S AA++ +G V P+ ++ QS LP+ + +
Sbjct 181 AGLASQAASGVTAIASSAGAAIATPVQGIVSAAPSALSMLQS----LPLSSFM------- 229
Query 238 YPASMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAG 297
YP SM I P+M + AGLAGA A G AA + P F G GT GGLG+
Sbjct 230 YPVSMAISPLMSVLTNAARTPAAGLAGATAGGAAAGE-PKFVGAAHPGTKPFAGGGLGSA 288
Query 298 MSAELGKARLVGAMSVPPTWEGSVPARMASSAMAGLG----AMPAEVPAAG----GPMGM 349
MSA LGKAR+VG MSVPPTW+GS P RMASS ++GLG A PAE+ A PM
Sbjct 289 MSAGLGKARMVGTMSVPPTWQGSTPTRMASSPLSGLGAAGMANPAELTGAARPAGMPMMP 348
Query 350 MPMPMGMGGAGAGMPAGMMGRGGANPHVVQARPSVVPRVGIG 391
MPM MG GAG G G NP VQ+RPSV+PR GIG
Sbjct 349 MPMGMGGAGAGMPGGMMGRGGAGGNP--VQSRPSVIPRTGIG 388
>gi|308370157|ref|ZP_07666873.1| putative PPE family protein [Mycobacterium tuberculosis SUMu002]
gi|308371764|ref|ZP_07667245.1| putative PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|308373649|ref|ZP_07667620.1| putative PPE family protein [Mycobacterium tuberculosis SUMu005]
gi|308325156|gb|EFP14007.1| putative PPE family protein [Mycobacterium tuberculosis SUMu002]
gi|308335519|gb|EFP24370.1| putative PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|308336851|gb|EFP25702.1| putative PPE family protein [Mycobacterium tuberculosis SUMu005]
Length=366
Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 227/373 (61%), Positives = 273/373 (74%), Gaps = 14/373 (3%)
Query 26 LFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGPASVAMAGAAAPYVGWLSAAAGQA 85
+F AA+AWEGLAADL ASASSF++V+A L GPW+GPAS++MA AA+PYVGWLS A QA
Sbjct 1 MFAAASAWEGLAADLWASASSFESVLAALTTGPWTGPASMSMAAAASPYVGWLSTVASQA 60
Query 86 ELSAGQATAAATAFEAALAATVHPAAVTANRVLLGALVATNILGQNTPAIAATEFDYVEM 145
+L+A QA AAATAFEAALAATVHP AVTANRV L +L+A N+LGQNTPAIAATEFDY+EM
Sbjct 61 QLAAIQARAAATAFEAALAATVHPTAVTANRVSLASLIAANVLGQNTPAIAATEFDYLEM 120
Query 146 WAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGLASQAGAQLTGMATSVSAALSPIAEG 205
WAQDV AMVGYHAGA +VA TL PFS+PP+ LAGLA+Q G Q+ GMAT+ SAA++P+ EG
Sbjct 121 WAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGLAAQVGTQVAGMATTASAAVTPVVEG 180
Query 206 AVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPASMLIGPMMQLAQMGTTANTAGLAGA 265
A+ VP V++ QS+ + LP LQ P +L P+ LA M +A G
Sbjct 181 AMASVPTVMSGMQSLVSQLP----LQHASMLFLPVRILTSPITTLASMAR--ESATRLGP 234
Query 266 EAAGLAAADVPTFAG-DIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTWEGSVPAR 324
A GLAAA+ P +G I + LGG LGAGMSA LG+A+LVG+MSVPPTW+GS+P
Sbjct 235 PAGGLAAANTPNPSGAAIPAFKPLGGR-ELGAGMSAGLGQAQLVGSMSVPPTWQGSIPIS 293
Query 325 MASSAMAGLGAMPAEV------PAAGGPMGMMPMPMGMGGAGAGMPAGMMGRGGANPHVV 378
MASSAM+GLG P V AAGG M MM MPM + GAGAGMP G+M R GA HV
Sbjct 294 MASSAMSGLGVPPNPVALTQAAGAAGGGMPMMLMPMSISGAGAGMPGGLMDRDGAGWHVT 353
Query 379 QARPSVVPRVGIG 391
QAR +V+PR G+G
Sbjct 354 QARLTVIPRTGVG 366
>gi|240170238|ref|ZP_04748897.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=385
Score = 317 bits (811), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 232/398 (59%), Positives = 275/398 (70%), Gaps = 20/398 (5%)
Query 1 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 60
MILDF+WLPPE+NSARI+AG GSGPL AA+AW LAADLRASA+SFD+V+ LA G WS
Sbjct 1 MILDFAWLPPEVNSARIFAGCGSGPLLRAASAWLSLAADLRASAASFDSVVTRLATGQWS 60
Query 61 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 120
GPASV+MA AAAP+VGWLS AAG+AEL+A QA AATAFEAAL+ATVHPAAVTANR+ L
Sbjct 61 GPASVSMAAAAAPFVGWLSGAAGEAELTAAQARVAATAFEAALSATVHPAAVTANRLRLR 120
Query 121 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLD--LA 178
+LV TN L QNTPAIAATEFDY EMWAQDV AM GYHAGAA+VA T+ PFS PP + LA
Sbjct 121 SLVVTNFLAQNTPAIAATEFDYQEMWAQDVAAMAGYHAGAASVASTMAPFSPPPSNPGLA 180
Query 179 GLASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAY 238
GLASQA + + + +S +A IA A+ +AA+S LP + + Y
Sbjct 181 GLASQAASGVPSVVSSAAAPAQDIA--------AIASAAESGLDSLPWSSVSLL----MY 228
Query 239 PASMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGM 298
P SM + P+M L T T G+AGA A+GL ADVP + G GGLG+ M
Sbjct 229 PLSMAMSPLMSLMSNATRTPTGGMAGALASGL-PADVPKLMTVPHAEITASGGGGLGSAM 287
Query 299 SAELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAA-----GGPMGMMPMP 353
+A+LG AR+VG MSVPPTW+GSVPA MASSAM+GLGA PAA P M
Sbjct 288 AADLGNARMVGGMSVPPTWQGSVPAPMASSAMSGLGAAGIPTPAALTGEPSSPGMPMMPM 347
Query 354 MGMGGAGAGMPAGMMGRGGANPHVVQARPSVVPRVGIG 391
M G GAGMP M+GRGGA+P+ Q+R V+P GIG
Sbjct 348 MPSGTGGAGMPGEMIGRGGASPNAPQSRSGVIPVTGIG 385
>gi|167966621|ref|ZP_02548898.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length=167
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 166/167 (99%), Positives = 167/167 (100%), Gaps = 0/167 (0%)
Query 225 PVDAALQVGQAAAYPASMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIAS 284
PVDAALQ+GQAAAYPASMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIAS
Sbjct 1 PVDAALQLGQAAAYPASMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIAS 60
Query 285 GTGLGGAGGLGAGMSAELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAG 344
GTGLGGAGGLGAGMSAELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAG
Sbjct 61 GTGLGGAGGLGAGMSAELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAG 120
Query 345 GPMGMMPMPMGMGGAGAGMPAGMMGRGGANPHVVQARPSVVPRVGIG 391
GPMGMMPMPMGMGGAGAGMPAGMMGRGGANPHVVQARPSVVPRVGIG
Sbjct 121 GPMGMMPMPMGMGGAGAGMPAGMMGRGGANPHVVQARPSVVPRVGIG 167
>gi|308370986|ref|ZP_07423462.2| putative PPE family protein [Mycobacterium tuberculosis SUMu003]
gi|308330170|gb|EFP19021.1| putative PPE family protein [Mycobacterium tuberculosis SUMu003]
Length=186
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 155/155 (100%), Positives = 155/155 (100%), Gaps = 0/155 (0%)
Query 1 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 60
MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS
Sbjct 32 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 91
Query 61 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 120
GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG
Sbjct 92 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 151
Query 121 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVG 155
ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVG
Sbjct 152 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVG 186
>gi|289758477|ref|ZP_06517855.1| predicted protein [Mycobacterium tuberculosis T85]
gi|289714041|gb|EFD78053.1| predicted protein [Mycobacterium tuberculosis T85]
Length=195
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 158/162 (98%), Positives = 160/162 (99%), Gaps = 0/162 (0%)
Query 230 LQVGQAAAYPASMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLG 289
+ G+AAAYPASMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLG
Sbjct 34 CRWGRAAAYPASMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLG 93
Query 290 GAGGLGAGMSAELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGM 349
GAGGLGAGMSAELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGM
Sbjct 94 GAGGLGAGMSAELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGM 153
Query 350 MPMPMGMGGAGAGMPAGMMGRGGANPHVVQARPSVVPRVGIG 391
MPMPMGMGGAGAGMPAGMMGRGGANPHVVQARPSVVPRVGIG
Sbjct 154 MPMPMGMGGAGAGMPAGMMGRGGANPHVVQARPSVVPRVGIG 195
>gi|306785136|ref|ZP_07423458.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
gi|308330341|gb|EFP19192.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
Length=156
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 156/156 (100%), Positives = 156/156 (100%), Gaps = 0/156 (0%)
Query 236 AAYPASMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLG 295
AAYPASMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLG
Sbjct 1 AAYPASMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLG 60
Query 296 AGMSAELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMG 355
AGMSAELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMG
Sbjct 61 AGMSAELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMG 120
Query 356 MGGAGAGMPAGMMGRGGANPHVVQARPSVVPRVGIG 391
MGGAGAGMPAGMMGRGGANPHVVQARPSVVPRVGIG
Sbjct 121 MGGAGAGMPAGMMGRGGANPHVVQARPSVVPRVGIG 156
>gi|121639007|ref|YP_979231.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224991499|ref|YP_002646188.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|121494655|emb|CAL73136.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224774614|dbj|BAH27420.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341603046|emb|CCC65724.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=282
Score = 282 bits (722), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 177/277 (64%), Positives = 212/277 (77%), Gaps = 6/277 (2%)
Query 1 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 60
M+L FSWLPPEINSAR++AGAGSGPLF AA+AWEGLA DL ASASSF++V+A L GPW+
Sbjct 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAVDLWASASSFESVLAALTTGPWT 60
Query 61 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 120
GPAS++MA AA+PYVGWLS A QA+L+A QA AAATAFEAALAATVHP AVTANRV L
Sbjct 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
Query 121 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL 180
+L+A N+LGQNTPAIAATEFDY+EMWAQDV AMVGYHAGA +VA TL PFS+PP+ LAGL
Sbjct 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL 180
Query 181 ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA 240
A+Q G Q+ GMAT+ SAA++P+ EGA+ VP V++ QS+ + LP LQ P
Sbjct 181 AAQVGTQVAGMATTASAAVTPVVEGAMASVPTVMSGMQSLVSQLP----LQHASMLFLPV 236
Query 241 SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPT 277
+L P+ LA M +A G A GLAAA+ P
Sbjct 237 RILTSPITTLASMAR--ESATRLGPPAGGLAAANTPN 271
>gi|306799075|ref|ZP_07437377.1| putative PPE family protein [Mycobacterium tuberculosis SUMu006]
gi|308340505|gb|EFP29356.1| putative PPE family protein [Mycobacterium tuberculosis SUMu006]
Length=213
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 157/213 (74%), Positives = 184/213 (87%), Gaps = 0/213 (0%)
Query 1 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 60
M+L FSWLPPEINSAR++AGAGSGPLF AA+AWEGLAADL ASASSF++V+A L GPW+
Sbjct 1 MVLGFSWLPPEINSARMFAGAGSGPLFAAASAWEGLAADLWASASSFESVLAALTTGPWT 60
Query 61 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 120
GPAS++MA AA+PYVGWLS A QA+L+A QA AAATAFEAALAATVHP AVTANRV L
Sbjct 61 GPASMSMAAAASPYVGWLSTVASQAQLAAIQARAAATAFEAALAATVHPTAVTANRVSLA 120
Query 121 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL 180
+L+A N+LGQNTPAIAATEFDY+EMWAQDV AMVGYHAGA +VA TL PFS+PP+ LAGL
Sbjct 121 SLIAANVLGQNTPAIAATEFDYLEMWAQDVAAMVGYHAGAKSVAATLAPFSLPPVSLAGL 180
Query 181 ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAV 213
A+Q G Q+ GMAT+ SAA++P+ EGA+ VP V
Sbjct 181 AAQVGTQVAGMATTASAAVTPVVEGAMASVPTV 213
>gi|306776613|ref|ZP_07414950.1| PPE family protein [Mycobacterium tuberculosis SUMu001]
gi|308379180|ref|ZP_07485384.2| PPE family protein [Mycobacterium tuberculosis SUMu010]
gi|308214988|gb|EFO74387.1| PPE family protein [Mycobacterium tuberculosis SUMu001]
gi|308357865|gb|EFP46716.1| PPE family protein [Mycobacterium tuberculosis SUMu010]
Length=139
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 139/139 (100%), Positives = 139/139 (100%), Gaps = 0/139 (0%)
Query 253 MGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSAELGKARLVGAMS 312
MGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSAELGKARLVGAMS
Sbjct 1 MGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSAELGKARLVGAMS 60
Query 313 VPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAGAGMPAGMMGRGG 372
VPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAGAGMPAGMMGRGG
Sbjct 61 VPPTWEGSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAGAGMPAGMMGRGG 120
Query 373 ANPHVVQARPSVVPRVGIG 391
ANPHVVQARPSVVPRVGIG
Sbjct 121 ANPHVVQARPSVVPRVGIG 139
>gi|306972727|ref|ZP_07485388.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010]
gi|308357854|gb|EFP46705.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010]
Length=133
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/133 (100%), Positives = 133/133 (100%), Gaps = 0/133 (0%)
Query 1 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 60
MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS
Sbjct 1 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 60
Query 61 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 120
GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG
Sbjct 61 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 120
Query 121 ALVATNILGQNTP 133
ALVATNILGQNTP
Sbjct 121 ALVATNILGQNTP 133
>gi|307080432|ref|ZP_07489602.1| PPE family protein [Mycobacterium tuberculosis SUMu011]
gi|308361808|gb|EFP50659.1| PPE family protein [Mycobacterium tuberculosis SUMu011]
Length=133
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 133/133 (100%), Positives = 133/133 (100%), Gaps = 0/133 (0%)
Query 259 TAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTWE 318
TAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTWE
Sbjct 1 TAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTWE 60
Query 319 GSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAGAGMPAGMMGRGGANPHVV 378
GSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAGAGMPAGMMGRGGANPHVV
Sbjct 61 GSVPARMASSAMAGLGAMPAEVPAAGGPMGMMPMPMGMGGAGAGMPAGMMGRGGANPHVV 120
Query 379 QARPSVVPRVGIG 391
QARPSVVPRVGIG
Sbjct 121 QARPSVVPRVGIG 133
>gi|342857484|ref|ZP_08714140.1| hypothetical protein MCOL_01370 [Mycobacterium colombiense CECT
3035]
gi|342134817|gb|EGT87983.1| hypothetical protein MCOL_01370 [Mycobacterium colombiense CECT
3035]
Length=408
Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 183/423 (44%), Positives = 234/423 (56%), Gaps = 55/423 (13%)
Query 1 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 60
MI F + PPEINSA I G G+GPLF AA+AW+GLA +L +SASSF ++ LA G W
Sbjct 1 MIPAFVFFPPEINSALIIGGPGAGPLFEAASAWDGLAVELSSSASSFHTTVSDLAGGAWM 60
Query 61 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 120
GP+S++M AAAPYV WL AA QAE++A QA AA A+E AL ATV V ANR L
Sbjct 61 GPSSMSMTAAAAPYVEWLIIAAAQAEVAALQARIAALAYEGALVATVPLPEVLANRARLL 120
Query 121 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPP------ 174
L+ATN G NT AIA TE +YVEMWAQDV AM+GYHAGA ++A+ L FSVPP
Sbjct 121 VLIATNFFGINTAAIAQTELEYVEMWAQDVAAMLGYHAGAQSMAQALPDFSVPPAALGGS 180
Query 175 ---LDLAGLASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAA---AQSVAAGLPVDA 228
DLAGLA A L+ +A+ LS + + +V+ A A S+ + PV
Sbjct 181 APTADLAGLAGLVTAPLS-LASQFFQGLSSLGTAFASELQSVLGALSPAVSLLSSTPVAT 239
Query 229 ALQVGQAAAYPASMLIGPMMQLAQMG-------------------TTANTAGLAGAEAAG 269
V QA YPA+ L+ PM+ LAQ A +A L+ ++G
Sbjct 240 LTTVAQAGMYPATALMTPMVTLAQSAGPAGPAAAPASAPTLAPALVNAASAPLSAPHSSG 299
Query 270 LAAADVPTFAGDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTWEGSVPARMASSA 329
A +D+ AG G+ AG LG AR +G++SVP WEGS+PA +A+ A
Sbjct 300 SALSDLQPLAGGGLGALGVATAG---------LGGARFIGSLSVPAAWEGSMPAYIATPA 350
Query 330 MAGLGAMPAEVPA-----AGGPMGMMPMPMGMGGAGAGMPAGMMGRGGANPHVVQARPSV 384
M+G+GA V A +G PM MP+ G P G G VV++RP V
Sbjct 351 MSGVGAGTPAVAAGTGSGSGVPMAAMPV-------GDKKPEG--EDRGTRAQVVRSRPKV 401
Query 385 VPR 387
VPR
Sbjct 402 VPR 404
>gi|296166320|ref|ZP_06848757.1| PPE13 protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295898329|gb|EFG77898.1| PPE13 protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=403
Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 192/412 (47%), Positives = 238/412 (58%), Gaps = 38/412 (9%)
Query 1 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 60
MI F PPEINSA +Y GAG GPL AA+AW+ LAADL A+A+SF++V+ G+AAGPW+
Sbjct 1 MIPAFMLFPPEINSALMYGGAGPGPLLTAASAWQALAADLAAAAASFESVVTGVAAGPWT 60
Query 61 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 120
GP+S AM AA PY+ WL +AAGQAE++A QATAAATA+EAA ATV AV ANR+ L
Sbjct 61 GPSSAAMVAAATPYLQWLISAAGQAEIAAAQATAAATAYEAAFMATVPTPAVLANRIRLL 120
Query 121 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL 180
AL+ATN GQNTPAIA TE +Y+EMWAQDV AMVGYH GA VA +L FSVPP+ L GL
Sbjct 121 ALIATNFFGQNTPAIAMTEIEYMEMWAQDVAAMVGYHVGAQTVAASLPAFSVPPVGLGGL 180
Query 181 ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAA-------AQSVAAGLPVDAALQVG 233
+ A L+ A+ A S + G V + +V+ A S+ + +PV +
Sbjct 181 SGLVTAPLS-FASQALGAFSSLGAGFVSDLQSVLGAFFPGLSSVTSLLSSMPVTTMTALA 239
Query 234 QAAAYPASMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGG 293
YPAS L+ PMM LA N A AG+ + GL AGG
Sbjct 240 PMGMYPASALMSPMMVLAH-----NVGPAAAPAMAGVTTVAAQAPQAAASGLQGLQSAGG 294
Query 294 LGAGMSAELGKARLVGAMSVPPTWEGS--VPARMASSAMAGLGAMPAEVPAAGGPMGMMP 351
LG +A LG AR VGA++VPPTW+GS VPA + S A+ LG ++P P+
Sbjct 295 LGVA-TAGLGTARFVGAITVPPTWQGSMPVPAVLTSLAVPALG---TQLPT---PLATGG 347
Query 352 MPMGMGGAGAGMPAGMMG----------------RGGANPHVVQARPSVVPR 387
PA M RGG NPHVVQ+RP VVPR
Sbjct 348 ASSPSSAPAGSTPAVAMAMDGRNADEDKTDARGRRGGENPHVVQSRPKVVPR 399
>gi|254774763|ref|ZP_05216279.1| hypothetical protein MaviaA2_08838 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|212595953|gb|ACJ35538.1| PPE13 [Mycobacterium avium subsp. avium]
Length=410
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 185/421 (44%), Positives = 227/421 (54%), Gaps = 49/421 (11%)
Query 1 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 60
MI F + PPEINSA I GAGSGPLF AA+AW+GLAA+L +SASSF V+ LAAGPW
Sbjct 1 MIPAFVFFPPEINSALIAGGAGSGPLFEAASAWDGLAAELSSSASSFQTVVTDLAAGPWM 60
Query 61 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 120
GP+SVAM AAAPYV WL AA QAE++A QA AA AFE AL ATV AV ANR L
Sbjct 61 GPSSVAMTAAAAPYVQWLIIAAAQAEVAALQARLAALAFEGALVATVPLPAVLANRARLL 120
Query 121 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLA-- 178
L+ATN GQNT AIA TE +YVEMW +DV AM+GYHAGA + A+ L F+VPP L
Sbjct 121 VLIATNFFGQNTAAIAQTELEYVEMWLRDVAAMLGYHAGAQSAAQALPAFTVPPAGLGGG 180
Query 179 -----------------GLASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVA 221
ASQ L+ + T+ + L + + +P V++ S+
Sbjct 181 AASAGLGGLAGLVSAPLSFASQFFEGLSSLGTAFATQL----QSVLAALPPAVSSLTSLI 236
Query 222 AGLPVDAALQVGQAAAYPASMLIGPMMQLAQ------------MGTTANTAGL--AGAEA 267
PV V QA YPA+ L+ PM+ LAQ NTA + A
Sbjct 237 TSTPVATLTSVAQAGMYPATALMTPMVTLAQSTAPAAAPAATPAPALVNTAKMPVETPHA 296
Query 268 AGLAAADVPTFAGDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTWEGSVPARMAS 327
A AD+ AG G+ AG LG AR VGAM+VPPTW+GS+PA +A+
Sbjct 297 AANPLADLQPLAGGGLGALGVASAG---------LGTARFVGAMAVPPTWQGSMPAYIAT 347
Query 328 SAMAGL-GAMPAEVPAAGGPMGMMPMPMGMGGAGAGMPAGMMGRGGANPHVVQARPSVVP 386
AM+G GA P G +P+ G P G VV++RP VVP
Sbjct 348 PAMSGAPGAAPMTAATTGSTGSSSGVPVTAMAVGDKKPEG--EDRATRAEVVRSRPKVVP 405
Query 387 R 387
R
Sbjct 406 R 406
>gi|41408234|ref|NP_961070.1| hypothetical protein MAP2136c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396589|gb|AAS04453.1| hypothetical protein MAP_2136c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=410
Score = 215 bits (548), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 184/421 (44%), Positives = 226/421 (54%), Gaps = 49/421 (11%)
Query 1 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 60
MI F + PPEINSA I GAGSGPLF AA+AW+GLAA+L +SASSF V+ LAAG W
Sbjct 1 MIPAFVFFPPEINSALIAGGAGSGPLFEAASAWDGLAAELSSSASSFQTVVTDLAAGSWM 60
Query 61 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 120
GP+SVAM AAAPYV WL AA QAE++A QA AA AFE AL ATV AV ANR L
Sbjct 61 GPSSVAMTAAAAPYVQWLIIAAAQAEVAALQARLAALAFEGALVATVPLPAVLANRARLL 120
Query 121 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLA-- 178
L+ATN GQNT AIA TE +YVEMW +DV AM+GYHAGA + A+ L F+VPP L
Sbjct 121 VLIATNFFGQNTAAIAQTELEYVEMWLRDVAAMLGYHAGAQSAAQALPAFTVPPAGLGGG 180
Query 179 -----------------GLASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVA 221
ASQ L+ + T+ + L + + +P V++ S+
Sbjct 181 AASAGLGGLAGLVSAPLSFASQFFEGLSSLGTAFATQL----QSVLAALPPAVSSLTSLI 236
Query 222 AGLPVDAALQVGQAAAYPASMLIGPMMQLAQ------------MGTTANTAGL--AGAEA 267
PV V QA YPA+ L+ PM+ LAQ NTA + A
Sbjct 237 TSTPVATLTSVAQAGMYPATALMTPMVTLAQSTAPAAAPAATPTPALVNTAKMPVETPHA 296
Query 268 AGLAAADVPTFAGDIASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTWEGSVPARMAS 327
A AD+ AG G+ AG LG AR VGAM+VPPTW+GS+PA +A+
Sbjct 297 AANPLADLQPLAGGGLGALGVASAG---------LGTARFVGAMAVPPTWQGSMPAYIAT 347
Query 328 SAMAGL-GAMPAEVPAAGGPMGMMPMPMGMGGAGAGMPAGMMGRGGANPHVVQARPSVVP 386
AM+G GA P G +P+ G P G VV++RP VVP
Sbjct 348 PAMSGAPGAAPMTAATTGSTGSSSGVPVTAMAVGDKKPEG--EDRATRAEVVRSRPKVVP 405
Query 387 R 387
R
Sbjct 406 R 406
>gi|333990650|ref|YP_004523264.1| PPE family protein [Mycobacterium sp. JDM601]
gi|333486619|gb|AEF36011.1| PPE family protein [Mycobacterium sp. JDM601]
Length=386
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 168/400 (42%), Positives = 220/400 (55%), Gaps = 34/400 (8%)
Query 3 LDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGP 62
+DF LPPEINSARIYAGAG G L AA AW+ LA +L ++A+S+ +VIAGL G W+GP
Sbjct 1 MDFGALPPEINSARIYAGAGPGSLLAAATAWQELATELNSAAASYGSVIAGLTTGSWAGP 60
Query 63 ASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGAL 122
+SVAMA AA PY+ WL+A QA+ +A Q +AA A+E A AATV P +TANR L L
Sbjct 61 SSVAMAAAAGPYITWLNATGAQAQQAAAQVSAAVAAYETAFAATVPPPLITANRSLQATL 120
Query 123 VATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPP--LDLAGL 180
ATNILGQNT AIA TE DY+EMWAQD AM GY AGA+A+A ++PF+ PP D +G
Sbjct 121 TATNILGQNTAAIATTEADYLEMWAQDTAAMYGY-AGASALATRVSPFTSPPQTTDPSGQ 179
Query 181 ASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQAAAYPA 240
+Q+ + +A S +A E + P +++A + GL A A++
Sbjct 180 ITQSYS----VAQSAAATTGTDTEALMSQGPQLISATPTALQGLAAPATETPSNASSASL 235
Query 241 SMLIGPMMQL------AQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGL 294
S L M L M G GA+ A AA +G + +G+G GL
Sbjct 236 SGLTSLTMPLRMAMMPMTMLMRMLMTGTNGAKGAAAGAAAPIAASGALTTGSGTVTLTGL 295
Query 295 GAGMSAELGKAR--LVGAMSVPPTWEGSVPARMASSA---MAGLGAMPAEVPAAGGPMGM 349
G +A G R +GA+SVPP W G A ++A + G A PA PAA PM
Sbjct 296 TTGQAATAGLGRGASIGALSVPPGWTGVGAATGPTAAGLPLTGSVAGPAGHPAAVPPM-- 353
Query 350 MPMPMGMGGAGAGMPAGMMGRGGANPHVVQA--RPSVVPR 387
+P+G + GRGG Q RP+V+PR
Sbjct 354 --VPVG----------NLAGRGGIGATATQYDFRPTVIPR 381
>gi|240169037|ref|ZP_04747696.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=391
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 170/411 (42%), Positives = 221/411 (54%), Gaps = 49/411 (11%)
Query 3 LDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGP 62
+DF LPPEINSAR+Y G GSG L AA W+G+A DL +AS+ +VI GL GPW G
Sbjct 1 MDFGALPPEINSARMYTGPGSGSLLAAAQVWDGVAIDLYNAASAVQSVIWGLLVGPWRGT 60
Query 63 ASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGAL 122
++ M AA+PYV WL A QAEL+A Q AATA+EAA A TV PA + NR+ L L
Sbjct 61 SAGLMVAAASPYVTWLGTTAAQAELTADQVRTAATAYEAAFATTVPPAVIAGNRIQLLTL 120
Query 123 VATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPP--LDLAGL 180
+A+N+ GQNTPAIA TE DY EMWAQD AM GY AA AETLTPF P + GL
Sbjct 121 IASNLFGQNTPAIAVTEADYGEMWAQDAAAMYGYAGSAAVAAETLTPFDESPEITNAGGL 180
Query 181 ASQAGA--QLTGMA------TSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQV 232
QAGA + T A ++V AL +AE +G A + A P + +
Sbjct 181 VQQAGAVEEATDTAAANQLISTVPQALQQLAEPG-QGTTPFTAVGELWKAISPHLSPI-- 237
Query 233 GQAAAYPASMLIGPMMQLAQMGTTANTA-----GLAGAEAAGLAAADVPTFAGDIAS-GT 286
+ SML + L+ + NTA G+A A A + +A V + A + S G+
Sbjct 238 ----SNIVSMLNNHVSMLSSGMSMTNTASSLLKGMAPAAAQAVESA-VESGARAMGSLGS 292
Query 287 GLGGAGGLGAGMSAELGKARLVGAMSVPPTW----EGSVPARMASSAMAGLGAMPAEVPA 342
GLG +G G+G++A LG+A +G++SVP W + VPA A +AG+ A AE
Sbjct 293 GLGTSGIGGSGVAAGLGRALSIGSLSVPHGWAAANQTVVPAARALP-LAGV-ATAAET-- 348
Query 343 AGGPMGMMPMPMGMGGAGAGMPAGMMGRGGANPHV-----VQARPSVVPRV 388
GP M+ G+P G + G V V RP V+PR
Sbjct 349 --GPAPML----------GGLPLGQLANAGGGNGVSGVLRVTPRPYVMPRT 387
>gi|342861307|ref|ZP_08717955.1| PPE family protein [Mycobacterium colombiense CECT 3035]
gi|342131207|gb|EGT84488.1| PPE family protein [Mycobacterium colombiense CECT 3035]
Length=417
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/172 (63%), Positives = 125/172 (73%), Gaps = 1/172 (0%)
Query 3 LDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGP 62
+DF LPPEINS R+YAG GSGP+ AAAAW+GL A+L ++AS + +VI+ L PW GP
Sbjct 1 MDFGALPPEINSGRMYAGPGSGPMMAAAAAWDGLGAELSSAASGYTSVISELTHAPWVGP 60
Query 63 ASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGAL 122
AS +M A PYV WLS A QAE +AGQA AAA AFEAA A TV P + ANRVLL L
Sbjct 61 ASSSMLSAVTPYVSWLSVLAAQAEETAGQARAAAAAFEAAFAMTVPPPVIAANRVLLANL 120
Query 123 VATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPP 174
VATN LGQNTPAIAATE Y+EMWAQD AM GY AG++AVA L P + PP
Sbjct 121 VATNFLGQNTPAIAATEAQYMEMWAQDAAAMYGY-AGSSAVASELPPLTSPP 171
>gi|294996719|ref|ZP_06802410.1| PPE family protein [Mycobacterium tuberculosis 210]
gi|13377907|gb|AAK20893.1| Rv1808-like protein [Mycobacterium microti]
gi|13377909|gb|AAK20894.1| Rv1808-like protein [Mycobacterium microti]
gi|339294744|gb|AEJ46855.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|339298372|gb|AEJ50482.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length=410
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/173 (62%), Positives = 124/173 (72%), Gaps = 1/173 (0%)
Query 2 ILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSG 61
+LDF LPPEINS R+YAG GSGPL AAAAW+ LAA+L ++A+S+ + I GL PW G
Sbjct 1 MLDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMG 60
Query 62 PASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGA 121
P+S+ MA A APYV W+S AGQAE + QA AA +E A AATV P + ANR LL +
Sbjct 61 PSSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMS 120
Query 122 LVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPP 174
LVATNI GQNTPAIAATE Y EMWAQD AM GY AG++A A L PFS PP
Sbjct 121 LVATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGY-AGSSATASQLAPFSEPP 172
>gi|240171260|ref|ZP_04749919.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=472
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 143/353 (41%), Positives = 190/353 (54%), Gaps = 25/353 (7%)
Query 5 FSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGPAS 64
F+ LPPEINS R+YAG GSGP+ AA AW+ LAA L ++A+S+ +VI L A W GP+S
Sbjct 3 FALLPPEINSGRMYAGPGSGPMLTAAEAWDALAAQLYSTAASYSSVITALTAT-WQGPSS 61
Query 65 VAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGALVA 124
V+MA AAAPY+ W SA A Q+E +A QA AAA A+E AA V P + ANR L +LVA
Sbjct 62 VSMATAAAPYMAWTSATAAQSEQTAAQARAAAVAYETTFAAMVPPPVIAANRSELASLVA 121
Query 125 TNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLA--GLAS 182
TNI GQNTPAIAA E Y +MWAQD AM Y AG +A A TLTPF+ P + GL
Sbjct 122 TNIFGQNTPAIAANEAQYAQMWAQDATAMNNY-AGQSAAATTLTPFAAPAATTSPGGLLG 180
Query 183 QAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAG-LPVDAALQVGQAAA---- 237
Q A + T + ++ +P + + ++ G P+ L Q A
Sbjct 181 QLAAIVNTYITQIVSSTQTQIANFFNAIPTALLSFTTIVTGPNPISGLLTAAQDFAGMQN 240
Query 238 ----------YPASML-IGPMMQLAQMGTTANTAGL----AGAEAAGLAAADVPTFAGDI 282
P +L + + MG T L + A A A +
Sbjct 241 INSLTGDLELIPKLILPVNDIFITIIMGLVFQTKYLNGLASTAAGAAAGNGGGSVLAAGL 300
Query 283 ASGTGLGGAGGLGAGMSAELGKARLVGAMSVPPTWEGSVPA-RMASSAMAGLG 334
SG L G+ GLG ++A++G A LVG M+VPP+W + PA R +S ++G G
Sbjct 301 GSGPNLAGSAGLGGAVAADVGHAGLVGGMAVPPSWATATPAIRTVASVLSGAG 353
>gi|308372058|ref|ZP_07427232.2| putative PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|308334577|gb|EFP23428.1| putative PPE family protein [Mycobacterium tuberculosis SUMu004]
Length=399
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/173 (62%), Positives = 124/173 (72%), Gaps = 1/173 (0%)
Query 2 ILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSG 61
+LDF LPPEINS R+YAG GSGPL AAAAW+ LAA+L ++A+S+ + I GL PW G
Sbjct 1 MLDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMG 60
Query 62 PASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGA 121
P+S+ MA A APYV W+S AGQAE + QA AA +E A AATV P + ANR LL +
Sbjct 61 PSSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMS 120
Query 122 LVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPP 174
LVATNI GQNTPAIAATE Y EMWAQD AM GY AG++A A L PFS PP
Sbjct 121 LVATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGY-AGSSATASQLAPFSEPP 172
>gi|167967397|ref|ZP_02549674.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|253799148|ref|YP_003032149.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|254231990|ref|ZP_04925317.1| PPE family protein [Mycobacterium tuberculosis C]
24 more sequence titles
Length=410
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/173 (62%), Positives = 124/173 (72%), Gaps = 1/173 (0%)
Query 2 ILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSG 61
+LDF LPPEINS R+YAG GSGPL AAAAW+ LAA+L ++A+S+ + I GL PW G
Sbjct 1 MLDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMG 60
Query 62 PASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGA 121
P+S+ MA A APYV W+S AGQAE + QA AA +E A AATV P + ANR LL +
Sbjct 61 PSSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMS 120
Query 122 LVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPP 174
LVATNI GQNTPAIAATE Y EMWAQD AM GY AG++A A L PFS PP
Sbjct 121 LVATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGY-AGSSATASQLAPFSEPP 172
>gi|212595976|gb|ACJ35541.1| PPE16 [Mycobacterium avium subsp. avium]
Length=392
Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 144/336 (43%), Positives = 180/336 (54%), Gaps = 26/336 (7%)
Query 3 LDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGP 62
+DF+ LPPE+NSAR+YAG GSGP+ AA AW+ LAA L ++A S+ A I L +GPW GP
Sbjct 1 MDFAVLPPEVNSARMYAGPGSGPMLAAAMAWDELAATLHSTADSYQAEITALTSGPWVGP 60
Query 63 ASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGAL 122
++ AM A PY+ W+ QAE +A A AAA A+E A A TV P VTANR LL L
Sbjct 61 SAAAMIAAITPYLTWMRTTGAQAEETANNARAAAFAYETAFAETVPPPVVTANRTLLAQL 120
Query 123 VATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGLAS 182
VATNILGQNTPAIA TE +Y EMWA+D AM GY AAA LTPF+ P A
Sbjct 121 VATNILGQNTPAIATTEAEYAEMWARDAAAMYGYAGAAAAATR-LTPFTQPDPTTNSGAD 179
Query 183 QAGAQLTGMATSVSAALSPIAEGAVEGVPAVVA--AAQSVAAGLPVDAALQVGQAAAYPA 240
Q+ A AT+ + + + + VP ++ A A G P L +G + A
Sbjct 180 QSQAVSKAAATAAGSTRNTVTQQPFSAVPNMLNNLAVSPNALGDPSVTDL-LGLESDLIA 238
Query 241 SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIAS---------GTG---- 287
L P + MG A +A + A +A A DI S GTG
Sbjct 239 IFLDAP-ASVVGMGVDAPSATI--ALPFDIAGALTGFHTDDIVSGWAGVQPWPGTGAVPP 295
Query 288 ------LGGAGGLGAGMSAELGKARLVGAMSVPPTW 317
AGG G SA LG+A+ VG +SVPPTW
Sbjct 296 SPFPVITNPAGGFGTLASAGLGQAKTVGTLSVPPTW 331
>gi|118466099|ref|YP_881935.1| PPE family protein [Mycobacterium avium 104]
gi|118167386|gb|ABK68283.1| ppe family protein [Mycobacterium avium 104]
Length=461
Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 144/336 (43%), Positives = 180/336 (54%), Gaps = 26/336 (7%)
Query 3 LDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGP 62
+DF+ LPPE+NSAR+YAG GSGP+ AA AW+ LAA L ++A S+ A I L +GPW GP
Sbjct 1 MDFAVLPPEVNSARMYAGPGSGPMLAAAMAWDELAATLHSTADSYQAEITALTSGPWVGP 60
Query 63 ASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGAL 122
++ AM A PY+ W+ QAE +A A AAA A+E A A TV P VTANR LL L
Sbjct 61 SAAAMIAAITPYLTWMRTTGAQAEETANNARAAAFAYETAFAETVPPPVVTANRTLLAQL 120
Query 123 VATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGLAS 182
VATNILGQNTPAIA TE +Y EMWA+D AM GY AAA LTPF+ P A
Sbjct 121 VATNILGQNTPAIATTEAEYAEMWARDAAAMYGYAGAAAAATR-LTPFTQPDPTTNSGAD 179
Query 183 QAGAQLTGMATSVSAALSPIAEGAVEGVPAVVA--AAQSVAAGLPVDAALQVGQAAAYPA 240
Q+ A AT+ + + + + VP ++ A A G P L +G + A
Sbjct 180 QSQAVSKAAATAAGSTRNTVTQQPFSAVPNMLNNLAVSPNALGDPSVTDL-LGLESDLIA 238
Query 241 SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIAS---------GTG---- 287
L P + MG A +A + A +A A DI S GTG
Sbjct 239 IFLDAP-ASVVGMGVDAPSATI--ALPFDIAGALTGFHTDDIVSGWAGVQPWPGTGAVPP 295
Query 288 ------LGGAGGLGAGMSAELGKARLVGAMSVPPTW 317
AGG G SA LG+A+ VG +SVPPTW
Sbjct 296 SPFPVITNPAGGFGTLASAGLGQAKTVGTLSVPPTW 331
>gi|31792997|ref|NP_855490.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|121637710|ref|YP_977933.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224990194|ref|YP_002644881.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
29 more sequence titles
Length=409
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 105/172 (62%), Positives = 123/172 (72%), Gaps = 1/172 (0%)
Query 3 LDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGP 62
+DF LPPEINS R+YAG GSGPL AAAAW+ LAA+L ++A+S+ + I GL PW GP
Sbjct 1 MDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMGP 60
Query 63 ASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGAL 122
+S+ MA A APYV W+S AGQAE + QA AA +E A AATV P + ANR LL +L
Sbjct 61 SSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMSL 120
Query 123 VATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPP 174
VATNI GQNTPAIAATE Y EMWAQD AM GY AG++A A L PFS PP
Sbjct 121 VATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGY-AGSSATASQLAPFSEPP 171
>gi|57116921|ref|YP_177844.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|148661614|ref|YP_001283137.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|148823021|ref|YP_001287775.1| PPE family protein [Mycobacterium tuberculosis F11]
9 more sequence titles
Length=409
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 105/172 (62%), Positives = 123/172 (72%), Gaps = 1/172 (0%)
Query 3 LDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGP 62
+DF LPPEINS R+YAG GSGPL AAAAW+ LAA+L ++A+S+ + I GL PW GP
Sbjct 1 MDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMGP 60
Query 63 ASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGAL 122
+S+ MA A APYV W+S AGQAE + QA AA +E A AATV P + ANR LL +L
Sbjct 61 SSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMSL 120
Query 123 VATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPP 174
VATNI GQNTPAIAATE Y EMWAQD AM GY AG++A A L PFS PP
Sbjct 121 VATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGY-AGSSATASQLAPFSEPP 171
>gi|240167823|ref|ZP_04746482.1| PPE family protein, PPE18 [Mycobacterium kansasii ATCC 12478]
Length=368
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 158/353 (45%), Positives = 208/353 (59%), Gaps = 29/353 (8%)
Query 3 LDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGP 62
+D++ LPPEINSAR+YAG GSGPL AAAAW+GL+A+L ++A+ +VI+GL GPW G
Sbjct 1 MDYAALPPEINSARMYAGVGSGPLLAAAAAWDGLSAELYSTAARCWSVISGLVGGPWQGA 60
Query 63 ASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGAL 122
ASVAMA A APY+ WL+ AGQAE +AGQATAAA A+ AA A TV PA + ANR LL AL
Sbjct 61 ASVAMATATAPYLAWLNVTAGQAESTAGQATAAAAAYHAAFAMTVPPAEIAANRTLLMAL 120
Query 123 VATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGLAS 182
VATNILGQNTPAIAATE Y MWAQD AM GY A AAA LTPF+V P + +
Sbjct 121 VATNILGQNTPAIAATEAHYATMWAQDAAAMYGYAAAAAAATR-LTPFAVAPEVVHAVGR 179
Query 183 QAGAQLTGMATSVSAALSPIAEGAVEGVPAVVA--AAQSVAAGLPVDAALQVGQAAAYPA 240
AG A +S +S VP ++ A + + AG+ + V + P
Sbjct 180 TAGQAAASNAVKLSQLIS--------TVPPLLKWFATRPLIAGV-----VTVEEGMLTPV 226
Query 241 SMLIGP---MMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGLGAG 297
+++G M + + + + G A+AA A V +F + GLG G + AG
Sbjct 227 EVVMGSTSATMSITSVLRSFMSMGQVAAQAAAPLAQAVTSFPIKMP---GLGRVGMVSAG 283
Query 298 MSAELGKARLVGAMSVPPTWEGSVP-ARMASSAMA--GLGAMPAEVPAAGGPM 347
M G+A +GA+SVP +W + P A++A++ GL + P A PM
Sbjct 284 M----GRAGSIGALSVPHSWGAAAPNISHAATALSNTGLASTSRIAPDAAAPM 332
>gi|336457435|gb|EGO36444.1| PPE-repeat containing protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=461
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 144/336 (43%), Positives = 179/336 (54%), Gaps = 26/336 (7%)
Query 3 LDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGP 62
+DF+ LPPE+NSAR+YAG GSGP+ AA AW+ LAA L ++A S+ A I L +GPW GP
Sbjct 1 MDFAVLPPEVNSARMYAGPGSGPMLAAAMAWDELAATLHSTADSYQAEITALTSGPWVGP 60
Query 63 ASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGAL 122
++ AM A PY+ W+ QAE +A A AAA A+E A A TV P VTANR LL L
Sbjct 61 SAAAMIAAITPYLTWMRTTGAQAEETANNARAAAFAYETAFAETVPPPVVTANRTLLAQL 120
Query 123 VATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGLAS 182
VATNILGQNTPAIA TE +Y EMWA+D AM GY AAA LTPF+ P A
Sbjct 121 VATNILGQNTPAIATTEAEYAEMWARDAAAMYGYAGAAAAATR-LTPFTQPDPTTNSGAD 179
Query 183 QAGAQLTGMATSVSAALSPIAEGAVEGVPAVVA--AAQSVAAGLPVDAALQVGQAAAYPA 240
Q+ A AT+ + + + + VP ++ A A G P L +G + A
Sbjct 180 QSQAVSKAAATAAGSTRNTVTQQPFSAVPNMLNNLALSPNALGDPSVTDL-LGLESDLIA 238
Query 241 SMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIAS---------GTG---- 287
L P + MG A +A + A +A A DI S GTG
Sbjct 239 IFLDAP-ASVVGMGVDAPSATI--ALPFDIAGALTGFHTDDIVSGWAGVQPWPGTGAVPP 295
Query 288 ------LGGAGGLGAGMSAELGKARLVGAMSVPPTW 317
AGG G SA LG+A VG +SVPPTW
Sbjct 296 SPFPVITNPAGGFGTLASAGLGQANTVGTLSVPPTW 331
>gi|254821012|ref|ZP_05226013.1| PPE family protein, PPE31 [Mycobacterium intracellulare ATCC
13950]
gi|212596828|gb|ACJ35609.1| PPE48 [Mycobacterium intracellulare ATCC 13950]
Length=389
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 171/399 (43%), Positives = 222/399 (56%), Gaps = 31/399 (7%)
Query 1 MILDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWS 60
M +DF+ LPPEINSAR+YAG GSGP+ +AA+AW GLAA+LR++A S+ + ++ L + W
Sbjct 1 MFVDFATLPPEINSARMYAGPGSGPMLVAASAWNGLAAELRSAALSYGSALSSLTSEEWH 60
Query 61 GPASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLG 120
GPAS AM AA PYV W+S A QAE +A QA AAA A+EAA AATV P A+ ANR L
Sbjct 61 GPASAAMVAAATPYVAWMSTTATQAEQAATQAEAAAAAYEAAFAATVPPPAIAANRAQLA 120
Query 121 ALVATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDLAGL 180
L+ATN+LGQNTPAIAATE Y EMWAQD M GY AG++A A L F+ D
Sbjct 121 TLIATNVLGQNTPAIAATEAQYGEMWAQDAATMYGY-AGSSAAATRLPMFT----DPTQT 175
Query 181 ASQAG--------AQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQV 232
SQ G AQ TG + A AV +++ + G + +
Sbjct 176 TSQDGQARQAAAVAQATGTSAGNQQATVSQLNTAVPNALQTLSSPTESSTGSTSGLSSIL 235
Query 233 GQAAAYPASMLIGPMMQLAQMGTTANTAGLAGAEAAGL----AAADVPTFAGDIA-SGTG 287
+ + ++ + AQ+ T ++ L GA + L + A V T G A S +G
Sbjct 236 DPNSNFWNTITSTGALDPAQVVQTVTSSTLIGASTSALNDLASGAPVATGIGTSAQSLSG 295
Query 288 LGGAGGLGAGMSAELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAMPAEVP----AA 343
L G G GA +SA LG+A LVG +SVPP+W + PA +AS + LG P P AA
Sbjct 296 LAGVGNAGASVSAGLGRASLVGPLSVPPSW--APPAPVASPLPSALGGTPMVAPPPAMAA 353
Query 344 GGPMGMMPMPMGMGGAGAGMPAGMMGRGGANPHVVQARP 382
G P GM PMG G G +P + G P+ V RP
Sbjct 354 GMP-GMPFSPMGNHGLGRAVP-----QYGFRPNFV-VRP 385
>gi|183981114|ref|YP_001849405.1| PPE family protein [Mycobacterium marinum M]
gi|183174440|gb|ACC39550.1| PPE family protein [Mycobacterium marinum M]
Length=380
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 152/385 (40%), Positives = 201/385 (53%), Gaps = 21/385 (5%)
Query 3 LDFSWLPPEINSARIYAGAGSGPLFMAAAAWEGLAADLRASASSFDAVIAGLAAGPWSGP 62
+DF LPPEINSAR+Y+G GS PL A+AW GLAA+L A+A+ ++ VI+GL + W GP
Sbjct 1 MDFGILPPEINSARMYSGPGSSPLLTVASAWSGLAAELSATANDYETVISGLQSQGWVGP 60
Query 63 ASVAMAGAAAPYVGWLSAAAGQAELSAGQATAAATAFEAALAATVHPAAVTANRVLLGAL 122
+S AMA + PYV WL A A E SA +A AA+A+EAA AATV P + ANR L L
Sbjct 61 SSEAMANSIWPYVAWLRATAAATEQSASKARIAASAYEAAFAATVPPPQIAANRAELTGL 120
Query 123 VATNILGQNTPAIAATEFDYVEMWAQDVGAMVGYHAGAAAVAETLTPFSVPPLDL----- 177
++TN++GQN+ AIAA E Y EMW+QD M Y A + A A +LTPF PP
Sbjct 121 ISTNVVGQNSAAIAAAEAQYGEMWSQDAATMYAY-AASCATATSLTPFVSPPQTTNPTAA 179
Query 178 ---AGLASQAGAQLTGMATSVSAALSPIAEGAVEGVPAVVAAAQSVAAGLPVDAALQVGQ 234
AG S+A A TG A S + L G ++ + + +A+A S AG P++ L+
Sbjct 180 ATQAGTLSRAAATTTGTAQSTLSRLISEVPGVLQALTSPLASAASSTAG-PIERFLEWYA 238
Query 235 AAAYPASMLIGPMMQLAQMGTTANTAGLAGAEAAGLAAADVPTFAGDIASGTGLGGAGGL 294
P + + L G A A A A A
Sbjct 239 ----PFANFFYDTLGLPFFG--AGITSFFAATAKTAGAIGPAAAAPAATVAATGAAEAVG 292
Query 295 GAGMSAELGKARLVGAMSVPPTWEGSVPARMASSAMAGLGAM--PAEVPAAGGPMGMMPM 352
+SA L +A VG +SVP TWEG+ PA ++A + + P V A G +G +PM
Sbjct 293 AGPVSASLAQASTVGKLSVPHTWEGATPATSPTTASKFISDVIEPESVEAGGNVIGGVPM 352
Query 353 P-MGMGGAGAGMPAGMMGRGGANPH 376
P G G AGAG G+ R PH
Sbjct 353 PGPGKGSAGAGPRYGV--RLTVMPH 375
Lambda K H
0.315 0.128 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 768123887500
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40