BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2353c Length=354 Score E Sequences producing significant alignments: (Bits) Value gi|57116975|ref|YP_177871.1| PPE family protein [Mycobacterium t... 594 6e-168 gi|298525838|ref|ZP_07013247.1| predicted protein [Mycobacterium... 553 2e-155 gi|148823556|ref|YP_001288310.1| PPE family protein [Mycobacteri... 552 3e-155 gi|289447995|ref|ZP_06437739.1| PPE family protein [Mycobacteriu... 552 3e-155 gi|253798567|ref|YP_003031568.1| PPE family protein [Mycobacteri... 552 4e-155 gi|15841865|ref|NP_336902.1| PPE family protein [Mycobacterium t... 552 4e-155 gi|323719074|gb|EGB28220.1| PPE family protein [Mycobacterium tu... 552 4e-155 gi|308373389|ref|ZP_07432129.2| putative PPE family protein [Myc... 551 5e-155 gi|254551402|ref|ZP_05141849.1| PPE family protein [Mycobacteriu... 551 5e-155 gi|306780391|ref|ZP_07418728.1| PPE family protein [Mycobacteriu... 551 5e-155 gi|306968502|ref|ZP_07481163.1| hypothetical protein TMIG_01030 ... 551 6e-155 gi|306808672|ref|ZP_07445340.1| putative PPE family protein [Myc... 551 6e-155 gi|306785141|ref|ZP_07423463.1| PPE family protein [Mycobacteriu... 551 7e-155 gi|306798224|ref|ZP_07436526.1| putative PPE family protein [Myc... 551 7e-155 gi|339632381|ref|YP_004724023.1| PPE family protein [Mycobacteri... 550 1e-154 gi|339295257|gb|AEJ47368.1| PPE family protein [Mycobacterium tu... 549 2e-154 gi|340627366|ref|YP_004745818.1| ppe family protein [Mycobacteri... 547 8e-154 gi|289443876|ref|ZP_06433620.1| PPE family protein [Mycobacteriu... 547 1e-153 gi|254232497|ref|ZP_04925824.1| PPE family protein [Mycobacteriu... 547 1e-153 gi|183983645|ref|YP_001851936.1| PPE family protein [Mycobacteri... 446 2e-123 gi|289758478|ref|ZP_06517856.1| PPE family protein [Mycobacteriu... 436 3e-120 gi|240173463|ref|ZP_04752121.1| PPE family protein [Mycobacteriu... 419 3e-115 gi|306785143|ref|ZP_07423465.1| hypothetical protein TMCG_00455 ... 325 1e-86 gi|323719065|gb|EGB28212.1| PPE family protein [Mycobacterium tu... 324 1e-86 gi|308375861|ref|ZP_07445342.2| putative PPE family protein [Myc... 324 1e-86 gi|306793829|ref|ZP_07432131.1| putative PPE family protein [Myc... 324 1e-86 gi|289447996|ref|ZP_06437740.1| predicted protein [Mycobacterium... 324 1e-86 gi|31793533|ref|NP_856026.1| PPE family protein [Mycobacterium b... 324 1e-86 gi|15841868|ref|NP_336905.1| PPE family protein [Mycobacterium t... 324 1e-86 gi|306789504|ref|ZP_07427826.1| putative PPE family protein [Myc... 324 2e-86 gi|308232111|ref|ZP_07414958.2| hypothetical protein TMAG_02915 ... 323 2e-86 gi|306780393|ref|ZP_07418730.1| hypothetical protein TMBG_00900 ... 323 2e-86 gi|308376988|ref|ZP_07440770.2| putative PPE family protein [Myc... 323 2e-86 gi|289762522|ref|ZP_06521900.1| PPE family protein [Mycobacteriu... 323 2e-86 gi|254365133|ref|ZP_04981179.1| PPE family protein [Mycobacteriu... 323 2e-86 gi|254232498|ref|ZP_04925825.1| PPE family protein [Mycobacteriu... 323 3e-86 gi|339298877|gb|AEJ50987.1| PPE family protein [Mycobacterium tu... 323 3e-86 gi|306798226|ref|ZP_07436528.1| hypothetical protein TMFG_01319 ... 323 3e-86 gi|253798566|ref|YP_003031567.1| PPE family protein [Mycobacteri... 320 2e-85 gi|289750955|ref|ZP_06510333.1| PPE family protein [Mycobacteriu... 283 4e-74 gi|240173493|ref|ZP_04752151.1| PPE family protein [Mycobacteriu... 272 7e-71 gi|31793532|ref|NP_856025.1| PPE family protein [Mycobacterium b... 265 7e-69 gi|121638235|ref|YP_978459.1| PPE family protein [Mycobacterium ... 265 9e-69 gi|183983646|ref|YP_001851937.1| PPE family protein [Mycobacteri... 244 1e-62 gi|340626148|ref|YP_004744600.1| PPE family protein [Mycobacteri... 234 1e-59 gi|183984290|ref|YP_001852581.1| PPE family protein [Mycobacteri... 224 2e-56 gi|298524632|ref|ZP_07012041.1| PPE family protein [Mycobacteriu... 223 4e-56 gi|289569131|ref|ZP_06449358.1| PPE family protein [Mycobacteriu... 223 4e-56 gi|15840574|ref|NP_335611.1| PPE family protein [Mycobacterium t... 223 4e-56 gi|308231748|ref|ZP_07413627.2| PPE family protein [Mycobacteriu... 223 4e-56 >gi|57116975|ref|YP_177871.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|148662185|ref|YP_001283708.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|167969911|ref|ZP_02552188.1| PPE family protein [Mycobacterium tuberculosis H37Ra] 9 more sequence titles Length=354 Score = 594 bits (1532), Expect = 6e-168, Method: Compositional matrix adjust. Identities = 354/354 (100%), Positives = 354/354 (100%), Gaps = 0/354 (0%) Query 1 MPGRFRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGS 60 MPGRFRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGS Sbjct 1 MPGRFRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGS 60 Query 61 NNIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNS 120 NNIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNS Sbjct 61 NNIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNS 120 Query 121 GTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNA 180 GTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNA Sbjct 121 GTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNA 180 Query 181 GNINSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSA 240 GNINSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSA Sbjct 181 GNINSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSA 240 Query 241 MTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLN 300 MTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLN Sbjct 241 MTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLN 300 Query 301 TGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 354 TGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG Sbjct 301 TGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 354 >gi|298525838|ref|ZP_07013247.1| predicted protein [Mycobacterium tuberculosis 94_M4241A] gi|298495632|gb|EFI30926.1| predicted protein [Mycobacterium tuberculosis 94_M4241A] Length=622 Score = 553 bits (1424), Expect = 2e-155, Method: Compositional matrix adjust. Identities = 348/348 (100%), Positives = 348/348 (100%), Gaps = 0/348 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG Sbjct 275 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 334 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG Sbjct 335 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 394 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS Sbjct 395 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 454 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP Sbjct 455 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 514 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS Sbjct 515 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 574 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 354 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG Sbjct 575 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 622 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 125/292 (43%), Positives = 153/292 (53%), Gaps = 51/292 (17%) Query 72 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSG 131 NFGFGN G+ N+G G TGD N GSGNIG N G GN+G FN G+GN G Sbjct 210 NFGFGNIGSLNLGSGNTGD-------TNVGSGNIGNTNLGGGNIGSFNLGSGN-----QG 257 Query 132 TANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNI-------- 183 N G GN GN+N G N GS N G N G+ N G + G+ N GS N G+ Sbjct 258 DINLGIGNVGNLNLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNG 317 Query 184 ------------NSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPG 231 N FGN+G GN GF N G+ N G+G GD G I GG N G Sbjct 318 NFNFGSGNTGSNNIGFGNTGSGNFGFGNTGNNNIGIGLTGD--------GQIGIGGLNSG 369 Query 232 TLNTGFFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSM 291 + N GF ++ T N G FN+GTGN GF GNSG N+GFGN+G VNT + Sbjct 370 SGNIGFGNSGTG---NVGLFNSGTGNVGF--------GNSGTANTGFGNAGNVNTGFWNG 418 Query 292 FGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGN 343 N+G+ N G GN+GF++A N G G ++S F N G GNSG L +G+ Sbjct 419 GSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGD 470 >gi|148823556|ref|YP_001288310.1| PPE family protein [Mycobacterium tuberculosis F11] gi|254365130|ref|ZP_04981176.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] gi|134150644|gb|EBA42689.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] gi|148722083|gb|ABR06708.1| PPE family protein [Mycobacterium tuberculosis F11] Length=613 Score = 552 bits (1423), Expect = 3e-155, Method: Compositional matrix adjust. Identities = 348/348 (100%), Positives = 348/348 (100%), Gaps = 0/348 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG Sbjct 266 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 325 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG Sbjct 326 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 385 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS Sbjct 386 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 445 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP Sbjct 446 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 505 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS Sbjct 506 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 565 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 354 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG Sbjct 566 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 613 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 125/292 (43%), Positives = 153/292 (53%), Gaps = 51/292 (17%) Query 72 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSG 131 NFGFGN G+ N+G G TGD N GSGNIG N G GN+G FN G+GN G Sbjct 201 NFGFGNIGSLNLGSGNTGD-------TNVGSGNIGNTNLGGGNIGSFNLGSGN-----QG 248 Query 132 TANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNI-------- 183 N G GN GN+N G N GS N G N G+ N G + G+ N GS N G+ Sbjct 249 DINLGIGNVGNLNLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNG 308 Query 184 ------------NSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPG 231 N FGN+G GN GF N G+ N G+G GD G I GG N G Sbjct 309 NFNFGSGNTGSNNIGFGNTGSGNFGFGNTGNNNIGIGLTGD--------GQIGIGGLNSG 360 Query 232 TLNTGFFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSM 291 + N GF ++ T N G FN+GTGN GF GNSG N+GFGN+G VNT + Sbjct 361 SGNIGFGNSGTG---NVGLFNSGTGNVGF--------GNSGTANTGFGNAGNVNTGFWNG 409 Query 292 FGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGN 343 N+G+ N G GN+GF++A N G G ++S F N G GNSG L +G+ Sbjct 410 GSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGD 461 >gi|289447995|ref|ZP_06437739.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|297731948|ref|ZP_06961066.1| PPE family protein [Mycobacterium tuberculosis KZN R506] gi|289420953|gb|EFD18154.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] Length=621 Score = 552 bits (1422), Expect = 3e-155, Method: Compositional matrix adjust. Identities = 348/348 (100%), Positives = 348/348 (100%), Gaps = 0/348 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG Sbjct 274 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 333 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG Sbjct 334 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 393 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS Sbjct 394 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 453 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP Sbjct 454 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 513 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS Sbjct 514 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 573 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 354 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG Sbjct 574 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 621 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 125/292 (43%), Positives = 153/292 (53%), Gaps = 51/292 (17%) Query 72 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSG 131 NFGFGN G+ N+G G TGD N GSGNIG N G GN+G FN G+GN G Sbjct 209 NFGFGNIGSLNLGSGNTGD-------TNVGSGNIGNTNLGGGNIGSFNLGSGN-----QG 256 Query 132 TANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNI-------- 183 N G GN GN+N G N GS N G N G+ N G + G+ N GS N G+ Sbjct 257 DINLGIGNVGNLNLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNG 316 Query 184 ------------NSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPG 231 N FGN+G GN GF N G+ N G+G GD G I GG N G Sbjct 317 NFNFGSGNTGSNNIGFGNTGSGNFGFGNTGNNNIGIGLTGD--------GQIGIGGLNSG 368 Query 232 TLNTGFFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSM 291 + N GF ++ T N G FN+GTGN GF GNSG N+GFGN+G VNT + Sbjct 369 SGNIGFGNSGTG---NVGLFNSGTGNVGF--------GNSGTANTGFGNAGNVNTGFWNG 417 Query 292 FGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGN 343 N+G+ N G GN+GF++A N G G ++S F N G GNSG L +G+ Sbjct 418 GSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGD 469 >gi|253798567|ref|YP_003031568.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|289570496|ref|ZP_06450723.1| predicted protein [Mycobacterium tuberculosis T17] gi|289575049|ref|ZP_06455276.1| predicted protein [Mycobacterium tuberculosis K85] 9 more sequence titles Length=622 Score = 552 bits (1422), Expect = 4e-155, Method: Compositional matrix adjust. Identities = 348/348 (100%), Positives = 348/348 (100%), Gaps = 0/348 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG Sbjct 275 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 334 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG Sbjct 335 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 394 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS Sbjct 395 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 454 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP Sbjct 455 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 514 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS Sbjct 515 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 574 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 354 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG Sbjct 575 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 622 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 125/292 (43%), Positives = 153/292 (53%), Gaps = 51/292 (17%) Query 72 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSG 131 NFGFGN G+ N+G G TGD N GSGNIG N G GN+G FN G+GN G Sbjct 210 NFGFGNIGSLNLGSGNTGD-------TNVGSGNIGNTNLGGGNIGSFNLGSGN-----QG 257 Query 132 TANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNI-------- 183 N G GN GN+N G N GS N G N G+ N G + G+ N GS N G+ Sbjct 258 DINLGIGNVGNLNLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNG 317 Query 184 ------------NSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPG 231 N FGN+G GN GF N G+ N G+G GD G I GG N G Sbjct 318 NFNFGSGNTGSNNIGFGNTGSGNFGFGNTGNNNIGIGLTGD--------GQIGIGGLNSG 369 Query 232 TLNTGFFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSM 291 + N GF ++ T N G FN+GTGN GF GNSG N+GFGN+G VNT + Sbjct 370 SGNIGFGNSGTG---NVGLFNSGTGNVGF--------GNSGTANTGFGNAGNVNTGFWNG 418 Query 292 FGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGN 343 N+G+ N G GN+GF++A N G G ++S F N G GNSG L +G+ Sbjct 419 GSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGD 470 >gi|15841865|ref|NP_336902.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|289754460|ref|ZP_06513838.1| PPE family protein [Mycobacterium tuberculosis EAS054] gi|13882131|gb|AAK46716.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|289695047|gb|EFD62476.1| PPE family protein [Mycobacterium tuberculosis EAS054] Length=621 Score = 552 bits (1422), Expect = 4e-155, Method: Compositional matrix adjust. Identities = 348/348 (100%), Positives = 348/348 (100%), Gaps = 0/348 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG Sbjct 274 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 333 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG Sbjct 334 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 393 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS Sbjct 394 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 453 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP Sbjct 454 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 513 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS Sbjct 514 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 573 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 354 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG Sbjct 574 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 621 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 125/292 (43%), Positives = 153/292 (53%), Gaps = 51/292 (17%) Query 72 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSG 131 NFGFGN G+ N+G G TGD N GSGNIG N G GN+G FN G+GN G Sbjct 209 NFGFGNIGSLNLGSGNTGD-------TNVGSGNIGNTNLGGGNIGSFNLGSGN-----QG 256 Query 132 TANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNI-------- 183 N G GN GN+N G N GS N G N G+ N G + G+ N GS N G+ Sbjct 257 DINLGIGNVGNLNLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNG 316 Query 184 ------------NSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPG 231 N FGN+G GN GF N G+ N G+G GD G I GG N G Sbjct 317 NFNFGSGNTGSNNIGFGNTGSGNFGFGNTGNNNIGIGLTGD--------GQIGIGGLNSG 368 Query 232 TLNTGFFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSM 291 + N GF ++ T N G FN+GTGN GF GNSG N+GFGN+G VNT + Sbjct 369 SGNIGFGNSGTG---NVGLFNSGTGNVGF--------GNSGTANTGFGNAGNVNTGFWNG 417 Query 292 FGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGN 343 N+G+ N G GN+GF++A N G G ++S F N G GNSG L +G+ Sbjct 418 GSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGD 469 >gi|323719074|gb|EGB28220.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=545 Score = 552 bits (1422), Expect = 4e-155, Method: Compositional matrix adjust. Identities = 348/348 (100%), Positives = 348/348 (100%), Gaps = 0/348 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG Sbjct 198 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 257 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG Sbjct 258 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 317 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS Sbjct 318 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 377 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP Sbjct 378 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 437 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS Sbjct 438 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 497 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 354 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG Sbjct 498 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 545 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 125/292 (43%), Positives = 153/292 (53%), Gaps = 51/292 (17%) Query 72 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSG 131 NFGFGN G+ N+G G TGD N GSGNIG N G GN+G FN G+GN G Sbjct 133 NFGFGNIGSLNLGSGNTGD-------TNVGSGNIGNTNLGGGNIGSFNLGSGN-----QG 180 Query 132 TANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNI-------- 183 N G GN GN+N G N GS N G N G+ N G + G+ N GS N G+ Sbjct 181 DINLGIGNVGNLNLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNG 240 Query 184 ------------NSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPG 231 N FGN+G GN GF N G+ N G+G GD G I GG N G Sbjct 241 NFNFGSGNTGSNNIGFGNTGSGNFGFGNTGNNNIGIGLTGD--------GQIGIGGLNSG 292 Query 232 TLNTGFFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSM 291 + N GF ++ T N G FN+GTGN GF GNSG N+GFGN+G VNT + Sbjct 293 SGNIGFGNSGTG---NVGLFNSGTGNVGF--------GNSGTANTGFGNAGNVNTGFWNG 341 Query 292 FGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGN 343 N+G+ N G GN+GF++A N G G ++S F N G GNSG L +G+ Sbjct 342 GSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGD 393 >gi|308373389|ref|ZP_07432129.2| putative PPE family protein [Mycobacterium tuberculosis SUMu005] gi|308337819|gb|EFP26670.1| putative PPE family protein [Mycobacterium tuberculosis SUMu005] Length=554 Score = 551 bits (1421), Expect = 5e-155, Method: Compositional matrix adjust. Identities = 348/348 (100%), Positives = 348/348 (100%), Gaps = 0/348 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG Sbjct 207 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 266 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG Sbjct 267 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 326 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS Sbjct 327 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 386 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP Sbjct 387 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 446 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS Sbjct 447 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 506 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 354 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG Sbjct 507 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 554 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 125/292 (43%), Positives = 153/292 (53%), Gaps = 51/292 (17%) Query 72 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSG 131 NFGFGN G+ N+G G TGD N GSGNIG N G GN+G FN G+GN G Sbjct 142 NFGFGNIGSLNLGSGNTGD-------TNVGSGNIGNTNLGGGNIGSFNLGSGN-----QG 189 Query 132 TANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNI-------- 183 N G GN GN+N G N GS N G N G+ N G + G+ N GS N G+ Sbjct 190 DINLGIGNVGNLNLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNG 249 Query 184 ------------NSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPG 231 N FGN+G GN GF N G+ N G+G GD G I GG N G Sbjct 250 NFNFGSGNTGSNNIGFGNTGSGNFGFGNTGNNNIGIGLTGD--------GQIGIGGLNSG 301 Query 232 TLNTGFFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSM 291 + N GF ++ T N G FN+GTGN GF GNSG N+GFGN+G VNT + Sbjct 302 SGNIGFGNSGTG---NVGLFNSGTGNVGF--------GNSGTANTGFGNAGNVNTGFWNG 350 Query 292 FGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGN 343 N+G+ N G GN+GF++A N G G ++S F N G GNSG L +G+ Sbjct 351 GSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGD 402 >gi|254551402|ref|ZP_05141849.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=622 Score = 551 bits (1421), Expect = 5e-155, Method: Compositional matrix adjust. Identities = 348/348 (100%), Positives = 348/348 (100%), Gaps = 0/348 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG Sbjct 275 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 334 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG Sbjct 335 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 394 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS Sbjct 395 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 454 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP Sbjct 455 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 514 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS Sbjct 515 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 574 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 354 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG Sbjct 575 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 622 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 120/263 (46%), Positives = 144/263 (55%), Gaps = 38/263 (14%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N+G N G+ NVG GN G+ N G GN GN N G N GS N G Sbjct 375 FGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGNA----------GNVNTGFWNGGSTNTG 424 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 N G+GN GF + GN N G LN+G+ N FGNSG GN G N+G N Sbjct 425 LANAGAGNTGFFDAGNYN------------FGSLNAGNINSSFGNSGDGNSGFLNAGDVN 472 Query 125 VGFGNSGTANTGFGNAGNVNTGFWNGGSTNTG----LANAGAGNTGFFDA--GNYNFGSL 178 G GN+G NTG GN+GN+NTG +N G+ NTG + AG N+GFF+A GN FG Sbjct 473 SGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP-NSGFFNAGTGNSGFGHN 531 Query 179 N-AGNINSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGF 237 + AG+ NS NSG GNSG++N + GN+G +NTG GNSG N N G TG Sbjct 532 DPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGV 591 Query 238 FSAMTQAGPNSGFFNAGTGNSGF 260 S SGFFN GTGNSG Sbjct 592 MS--------SGFFNFGTGNSGL 606 Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 125/292 (43%), Positives = 153/292 (53%), Gaps = 51/292 (17%) Query 72 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSG 131 NFGFGN G+ N+G G TGD N GSGNIG N G GN+G FN G+GN G Sbjct 210 NFGFGNIGSLNLGSGNTGD-------TNVGSGNIGNTNLGGGNIGSFNLGSGN-----QG 257 Query 132 TANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNI-------- 183 N G GN GN+N G N GS N G N G+ N G + G+ N GS N G+ Sbjct 258 DINLGIGNVGNLNLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNG 317 Query 184 ------------NSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPG 231 N FGN+G GN GF N G+ N G+G GD G I GG N G Sbjct 318 NFNFGSGNTGSNNIGFGNTGSGNFGFGNTGNNNIGIGLTGD--------GQIGIGGLNSG 369 Query 232 TLNTGFFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSM 291 + N GF ++ T N G FN+GTGN GF GNSG N+GFGN+G VNT + Sbjct 370 SGNIGFGNSGTG---NVGLFNSGTGNVGF--------GNSGTANTGFGNAGNVNTGFWNG 418 Query 292 FGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGN 343 N+G+ N G GN+GF++A N G G ++S F N G GNSG L +G+ Sbjct 419 GSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGD 470 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 99/217 (46%), Positives = 123/217 (57%), Gaps = 19/217 (8%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N G GN G+ N G N GSTN G N G N G + GN+NFGS N G+ N Sbjct 395 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 454 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGD--------GQIGIGGLNSGSGNIGFGNSGT---G 113 FGN+G GN GF N G+ N G+G GD G I GG N G+ N GF ++ T Sbjct 455 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 514 Query 114 NVGLFNSGTGNVGF--------GNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNT 165 N G FN+GTGN GF GNSG N+GFGN+G VNT + N+G+ N G GN+ Sbjct 515 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 574 Query 166 GFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGD 202 GF++A N G G ++S F N G GNSG L +G+ Sbjct 575 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGN 611 >gi|306780391|ref|ZP_07418728.1| PPE family protein [Mycobacterium tuberculosis SUMu002] gi|308326822|gb|EFP15673.1| PPE family protein [Mycobacterium tuberculosis SUMu002] Length=571 Score = 551 bits (1420), Expect = 5e-155, Method: Compositional matrix adjust. Identities = 348/348 (100%), Positives = 348/348 (100%), Gaps = 0/348 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG Sbjct 224 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 283 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG Sbjct 284 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 343 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS Sbjct 344 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 403 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP Sbjct 404 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 463 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS Sbjct 464 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 523 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 354 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG Sbjct 524 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 571 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 125/292 (43%), Positives = 153/292 (53%), Gaps = 51/292 (17%) Query 72 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSG 131 NFGFGN G+ N+G G TGD N GSGNIG N G GN+G FN +G GN G Sbjct 159 NFGFGNIGSLNLGSGNTGD-------TNVGSGNIGNTNLGGGNIGSFN-----LGSGNQG 206 Query 132 TANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNI-------- 183 N G GN GN+N G N GS N G N G+ N G + G+ N GS N G+ Sbjct 207 DINLGIGNVGNLNLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNG 266 Query 184 ------------NSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPG 231 N FGN+G GN GF N G+ N G+G GD G I GG N G Sbjct 267 NFNFGSGNTGSNNIGFGNTGSGNFGFGNTGNNNIGIGLTGD--------GQIGIGGLNSG 318 Query 232 TLNTGFFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSM 291 + N GF ++ T N G FN+GTGN GF GNSG N+GFGN+G VNT + Sbjct 319 SGNIGFGNSGTG---NVGLFNSGTGNVGF--------GNSGTANTGFGNAGNVNTGFWNG 367 Query 292 FGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGN 343 N+G+ N G GN+GF++A N G G ++S F N G GNSG L +G+ Sbjct 368 GSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGD 419 >gi|306968502|ref|ZP_07481163.1| hypothetical protein TMIG_01030 [Mycobacterium tuberculosis SUMu009] gi|308353911|gb|EFP42762.1| hypothetical protein TMIG_01030 [Mycobacterium tuberculosis SUMu009] Length=532 Score = 551 bits (1420), Expect = 6e-155, Method: Compositional matrix adjust. Identities = 348/348 (100%), Positives = 348/348 (100%), Gaps = 0/348 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG Sbjct 185 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 244 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG Sbjct 245 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 304 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS Sbjct 305 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 364 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP Sbjct 365 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 424 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS Sbjct 425 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 484 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 354 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG Sbjct 485 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 532 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 125/292 (43%), Positives = 153/292 (53%), Gaps = 51/292 (17%) Query 72 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSG 131 NFGFGN G+ N+G G TGD N GSGNIG N G GN+G FN +G GN G Sbjct 120 NFGFGNIGSLNLGSGNTGD-------TNVGSGNIGNTNLGGGNIGSFN-----LGSGNQG 167 Query 132 TANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNI-------- 183 N G GN GN+N G N GS N G N G+ N G + G+ N GS N G+ Sbjct 168 DINLGIGNVGNLNLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNG 227 Query 184 ------------NSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPG 231 N FGN+G GN GF N G+ N G+G GD G I GG N G Sbjct 228 NFNFGSGNTGSNNIGFGNTGSGNFGFGNTGNNNIGIGLTGD--------GQIGIGGLNSG 279 Query 232 TLNTGFFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSM 291 + N GF ++ T N G FN+GTGN GF GNSG N+GFGN+G VNT + Sbjct 280 SGNIGFGNSGTG---NVGLFNSGTGNVGF--------GNSGTANTGFGNAGNVNTGFWNG 328 Query 292 FGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGN 343 N+G+ N G GN+GF++A N G G ++S F N G GNSG L +G+ Sbjct 329 GSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGD 380 >gi|306808672|ref|ZP_07445340.1| putative PPE family protein [Mycobacterium tuberculosis SUMu007] gi|308344981|gb|EFP33832.1| putative PPE family protein [Mycobacterium tuberculosis SUMu007] Length=551 Score = 551 bits (1420), Expect = 6e-155, Method: Compositional matrix adjust. Identities = 348/348 (100%), Positives = 348/348 (100%), Gaps = 0/348 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG Sbjct 204 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 263 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG Sbjct 264 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 323 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS Sbjct 324 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 383 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP Sbjct 384 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 443 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS Sbjct 444 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 503 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 354 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG Sbjct 504 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 551 Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 120/263 (46%), Positives = 144/263 (55%), Gaps = 38/263 (14%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N+G N G+ NVG GN G+ N G GN GN N G N GS N G Sbjct 304 FGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGNA----------GNVNTGFWNGGSTNTG 353 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 N G+GN GF + GN N G LN+G+ N FGNSG GN G N+G N Sbjct 354 LANAGAGNTGFFDAGNYN------------FGSLNAGNINSSFGNSGDGNSGFLNAGDVN 401 Query 125 VGFGNSGTANTGFGNAGNVNTGFWNGGSTNTG----LANAGAGNTGFFDA--GNYNFGSL 178 G GN+G NTG GN+GN+NTG +N G+ NTG + AG N+GFF+A GN FG Sbjct 402 SGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP-NSGFFNAGTGNSGFGHN 460 Query 179 N-AGNINSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGF 237 + AG+ NS NSG GNSG++N + GN+G +NTG GNSG N N G TG Sbjct 461 DPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGV 520 Query 238 FSAMTQAGPNSGFFNAGTGNSGF 260 S SGFFN GTGNSG Sbjct 521 MS--------SGFFNFGTGNSGL 535 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 125/292 (43%), Positives = 153/292 (53%), Gaps = 51/292 (17%) Query 72 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSG 131 NFGFGN G+ N+G G TGD N GSGNIG N G GN+G FN +G GN G Sbjct 139 NFGFGNIGSLNLGSGNTGD-------TNVGSGNIGNTNLGGGNIGSFN-----LGSGNQG 186 Query 132 TANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNI-------- 183 N G GN GN+N G N GS N G N G+ N G + G+ N GS N G+ Sbjct 187 DINLGIGNVGNLNLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNG 246 Query 184 ------------NSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPG 231 N FGN+G GN GF N G+ N G+G GD G I GG N G Sbjct 247 NFNFGSGNTGSNNIGFGNTGSGNFGFGNTGNNNIGIGLTGD--------GQIGIGGLNSG 298 Query 232 TLNTGFFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSM 291 + N GF ++ T N G FN+GTGN GF GNSG N+GFGN+G VNT + Sbjct 299 SGNIGFGNSGTG---NVGLFNSGTGNVGF--------GNSGTANTGFGNAGNVNTGFWNG 347 Query 292 FGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGN 343 N+G+ N G GN+GF++A N G G ++S F N G GNSG L +G+ Sbjct 348 GSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGD 399 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 99/217 (46%), Positives = 123/217 (57%), Gaps = 19/217 (8%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N G GN G+ N G N GSTN G N G N G + GN+NFGS N G+ N Sbjct 324 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 383 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGD--------GQIGIGGLNSGSGNIGFGNSGT---G 113 FGN+G GN GF N G+ N G+G GD G I GG N G+ N GF ++ T Sbjct 384 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 443 Query 114 NVGLFNSGTGNVGF--------GNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNT 165 N G FN+GTGN GF GNSG N+GFGN+G VNT + N+G+ N G GN+ Sbjct 444 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 503 Query 166 GFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGD 202 GF++A N G G ++S F N G GNSG L +G+ Sbjct 504 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGN 540 >gi|306785141|ref|ZP_07423463.1| PPE family protein [Mycobacterium tuberculosis SUMu003] gi|308330171|gb|EFP19022.1| PPE family protein [Mycobacterium tuberculosis SUMu003] Length=547 Score = 551 bits (1420), Expect = 7e-155, Method: Compositional matrix adjust. Identities = 348/348 (100%), Positives = 348/348 (100%), Gaps = 0/348 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG Sbjct 200 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 259 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG Sbjct 260 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 319 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS Sbjct 320 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 379 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP Sbjct 380 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 439 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS Sbjct 440 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 499 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 354 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG Sbjct 500 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 547 Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 125/292 (43%), Positives = 153/292 (53%), Gaps = 51/292 (17%) Query 72 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSG 131 NFGFGN G+ N+G G TGD N GSGNIG N G GN+G FN +G GN G Sbjct 135 NFGFGNIGSLNLGSGNTGD-------TNVGSGNIGNTNLGGGNIGSFN-----LGSGNQG 182 Query 132 TANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNI-------- 183 N G GN GN+N G N GS N G N G+ N G + G+ N GS N G+ Sbjct 183 DINLGIGNVGNLNLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNG 242 Query 184 ------------NSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPG 231 N FGN+G GN GF N G+ N G+G GD G I GG N G Sbjct 243 NFNFGSGNTGSNNIGFGNTGSGNFGFGNTGNNNIGIGLTGD--------GQIGIGGLNSG 294 Query 232 TLNTGFFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSM 291 + N GF ++ T N G FN+GTGN GF GNSG N+GFGN+G VNT + Sbjct 295 SGNIGFGNSGTG---NVGLFNSGTGNVGF--------GNSGTANTGFGNAGNVNTGFWNG 343 Query 292 FGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGN 343 N+G+ N G GN+GF++A N G G ++S F N G GNSG L +G+ Sbjct 344 GSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGD 395 >gi|306798224|ref|ZP_07436526.1| putative PPE family protein [Mycobacterium tuberculosis SUMu006] gi|308341495|gb|EFP30346.1| putative PPE family protein [Mycobacterium tuberculosis SUMu006] Length=537 Score = 551 bits (1419), Expect = 7e-155, Method: Compositional matrix adjust. Identities = 348/348 (100%), Positives = 348/348 (100%), Gaps = 0/348 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG Sbjct 190 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 249 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG Sbjct 250 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 309 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS Sbjct 310 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 369 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP Sbjct 370 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 429 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS Sbjct 430 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 489 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 354 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG Sbjct 490 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 537 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 125/292 (43%), Positives = 153/292 (53%), Gaps = 51/292 (17%) Query 72 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSG 131 NFGFGN G+ N+G G TGD N GSGNIG N G GN+G FN +G GN G Sbjct 125 NFGFGNIGSLNLGSGNTGD-------TNVGSGNIGNTNLGGGNIGSFN-----LGSGNQG 172 Query 132 TANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNI-------- 183 N G GN GN+N G N GS N G N G+ N G + G+ N GS N G+ Sbjct 173 DINLGIGNVGNLNLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNG 232 Query 184 ------------NSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPG 231 N FGN+G GN GF N G+ N G+G GD G I GG N G Sbjct 233 NFNFGSGNTGSNNIGFGNTGSGNFGFGNTGNNNIGIGLTGD--------GQIGIGGLNSG 284 Query 232 TLNTGFFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSM 291 + N GF ++ T N G FN+GTGN GF GNSG N+GFGN+G VNT + Sbjct 285 SGNIGFGNSGTG---NVGLFNSGTGNVGF--------GNSGTANTGFGNAGNVNTGFWNG 333 Query 292 FGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGN 343 N+G+ N G GN+GF++A N G G ++S F N G GNSG L +G+ Sbjct 334 GSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGD 385 >gi|339632381|ref|YP_004724023.1| PPE family protein [Mycobacterium africanum GM041182] gi|339331737|emb|CCC27439.1| PPE family protein [Mycobacterium africanum GM041182] Length=515 Score = 550 bits (1417), Expect = 1e-154, Method: Compositional matrix adjust. Identities = 348/348 (100%), Positives = 348/348 (100%), Gaps = 0/348 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG Sbjct 168 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 227 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG Sbjct 228 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 287 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS Sbjct 288 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 347 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP Sbjct 348 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 407 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS Sbjct 408 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 467 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 354 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG Sbjct 468 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 515 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 125/292 (43%), Positives = 153/292 (53%), Gaps = 51/292 (17%) Query 72 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSG 131 NFGFGN G+ N+G G TGD N GSGNIG N G GN+G FN +G GN G Sbjct 103 NFGFGNIGSLNLGSGNTGD-------TNVGSGNIGNTNLGGGNIGSFN-----LGSGNQG 150 Query 132 TANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNI-------- 183 N G GN GN+N G N GS N G N G+ N G + G+ N GS N G+ Sbjct 151 DINLGIGNVGNLNLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNG 210 Query 184 ------------NSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPG 231 N FGN+G GN GF N G+ N G+G GD G I GG N G Sbjct 211 NFNFGSGNTGSNNIGFGNTGSGNFGFGNTGNNNIGIGLTGD--------GQIGIGGLNSG 262 Query 232 TLNTGFFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSM 291 + N GF ++ T N G FN+GTGN GF GNSG N+GFGN+G VNT + Sbjct 263 SGNIGFGNSGTG---NVGLFNSGTGNVGF--------GNSGTANTGFGNAGNVNTGFWNG 311 Query 292 FGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGN 343 N+G+ N G GN+GF++A N G G ++S F N G GNSG L +G+ Sbjct 312 GSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGD 363 >gi|339295257|gb|AEJ47368.1| PPE family protein [Mycobacterium tuberculosis CCDC5079] Length=622 Score = 549 bits (1415), Expect = 2e-154, Method: Compositional matrix adjust. Identities = 347/348 (99%), Positives = 347/348 (99%), Gaps = 0/348 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG Sbjct 275 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 334 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG Sbjct 335 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 394 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS Sbjct 395 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 454 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQA P Sbjct 455 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAVP 514 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS Sbjct 515 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 574 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 354 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG Sbjct 575 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 622 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 125/292 (43%), Positives = 153/292 (53%), Gaps = 51/292 (17%) Query 72 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSG 131 NFGFGN G+ N+G G TGD N GSGNIG N G GN+G FN G+GN G Sbjct 210 NFGFGNIGSLNLGSGNTGD-------TNVGSGNIGNTNLGGGNIGSFNLGSGN-----QG 257 Query 132 TANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNI-------- 183 N G GN GN+N G N GS N G N G+ N G + G+ N GS N G+ Sbjct 258 DINLGIGNVGNLNLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNG 317 Query 184 ------------NSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPG 231 N FGN+G GN GF N G+ N G+G GD G I GG N G Sbjct 318 NFNFGSGNTGSNNIGFGNTGSGNFGFGNTGNNNIGIGLTGD--------GQIGIGGLNSG 369 Query 232 TLNTGFFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSM 291 + N GF ++ T N G FN+GTGN GF GNSG N+GFGN+G VNT + Sbjct 370 SGNIGFGNSGTG---NVGLFNSGTGNVGF--------GNSGTANTGFGNAGNVNTGFWNG 418 Query 292 FGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGN 343 N+G+ N G GN+GF++A N G G ++S F N G GNSG L +G+ Sbjct 419 GSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGD 470 >gi|340627366|ref|YP_004745818.1| ppe family protein [Mycobacterium canettii CIPT 140010059] gi|340005556|emb|CCC44718.1| ppe family protein [Mycobacterium canettii CIPT 140010059] Length=607 Score = 547 bits (1410), Expect = 8e-154, Method: Compositional matrix adjust. Identities = 347/348 (99%), Positives = 347/348 (99%), Gaps = 0/348 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG Sbjct 260 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 319 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG Sbjct 320 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 379 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS Sbjct 380 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 439 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFN GTLNTGFFSAMTQAGP Sbjct 440 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNAGTLNTGFFSAMTQAGP 499 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS Sbjct 500 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 559 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 354 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG Sbjct 560 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 607 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 120/263 (46%), Positives = 144/263 (55%), Gaps = 38/263 (14%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N+G N G+ NVG GN G+ N G GN GN N G N GS N G Sbjct 360 FGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGNA----------GNVNTGFWNGGSTNTG 409 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 N G+GN GF + GN N G LN+G+ N FGNSG GN G N+G N Sbjct 410 LANAGAGNTGFFDAGNYN------------FGSLNAGNINSSFGNSGDGNSGFLNAGDVN 457 Query 125 VGFGNSGTANTGFGNAGNVNTGFWNGGSTNTG----LANAGAGNTGFFDA--GNYNFGSL 178 G GN+G NTG GN+GN+NTG +N G+ NTG + AG N+GFF+A GN FG Sbjct 458 SGVGNAGDVNTGLGNSGNINTGGFNAGTLNTGFFSAMTQAGP-NSGFFNAGTGNSGFGHN 516 Query 179 N-AGNINSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGF 237 + AG+ NS NSG GNSG++N + GN+G +NTG GNSG N N G TG Sbjct 517 DPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGV 576 Query 238 FSAMTQAGPNSGFFNAGTGNSGF 260 S SGFFN GTGNSG Sbjct 577 MS--------SGFFNFGTGNSGL 591 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 125/292 (43%), Positives = 153/292 (53%), Gaps = 51/292 (17%) Query 72 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSG 131 NFGFGN G+ N+G G TGD N GSGNIG N G GN+G FN G+GN G Sbjct 195 NFGFGNIGSLNLGSGNTGD-------TNVGSGNIGNTNLGGGNIGSFNLGSGN-----QG 242 Query 132 TANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNI-------- 183 N G GN GN+N G N GS N G N G+ N G + G+ N GS N G+ Sbjct 243 DINLGIGNVGNLNLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNG 302 Query 184 ------------NSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPG 231 N FGN+G GN GF N G+ N G+G GD G I GG N G Sbjct 303 NFNFGSGNTGSNNIGFGNTGSGNFGFGNTGNNNIGIGLTGD--------GQIGIGGLNSG 354 Query 232 TLNTGFFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSM 291 + N GF ++ T N G FN+GTGN GF GNSG N+GFGN+G VNT + Sbjct 355 SGNIGFGNSGTG---NVGLFNSGTGNVGF--------GNSGTANTGFGNAGNVNTGFWNG 403 Query 292 FGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGN 343 N+G+ N G GN+GF++A N G G ++S F N G GNSG L +G+ Sbjct 404 GSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGD 455 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 99/217 (46%), Positives = 124/217 (58%), Gaps = 19/217 (8%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N G GN G+ N G N GSTN G N G N G + GN+NFGS N G+ N Sbjct 380 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 439 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGD--------GQIGIGGLNSGSGNIGFGNSGTG--- 113 FGN+G GN GF N G+ N G+G GD G I GG N+G+ N GF ++ T Sbjct 440 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNAGTLNTGFFSAMTQAGP 499 Query 114 NVGLFNSGTGNVGF--------GNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNT 165 N G FN+GTGN GF GNSG N+GFGN+G VNT + N+G+ N G GN+ Sbjct 500 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 559 Query 166 GFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGD 202 GF++A N G G ++S F N G GNSG L +G+ Sbjct 560 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGN 596 >gi|289443876|ref|ZP_06433620.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289553855|ref|ZP_06443065.1| PPE family protein [Mycobacterium tuberculosis KZN 605] gi|289416795|gb|EFD14035.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289438487|gb|EFD20980.1| PPE family protein [Mycobacterium tuberculosis KZN 605] Length=352 Score = 547 bits (1409), Expect = 1e-153, Method: Compositional matrix adjust. Identities = 348/348 (100%), Positives = 348/348 (100%), Gaps = 0/348 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG Sbjct 5 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 64 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG Sbjct 65 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 124 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS Sbjct 125 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 184 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP Sbjct 185 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 244 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS Sbjct 245 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 304 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 354 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG Sbjct 305 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 352 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 120/263 (46%), Positives = 144/263 (55%), Gaps = 38/263 (14%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N+G N G+ NVG GN G+ N G GN GN N G N GS N G Sbjct 105 FGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGNA----------GNVNTGFWNGGSTNTG 154 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 N G+GN GF + GN N G LN+G+ N FGNSG GN G N+G N Sbjct 155 LANAGAGNTGFFDAGNYN------------FGSLNAGNINSSFGNSGDGNSGFLNAGDVN 202 Query 125 VGFGNSGTANTGFGNAGNVNTGFWNGGSTNTG----LANAGAGNTGFFDA--GNYNFGSL 178 G GN+G NTG GN+GN+NTG +N G+ NTG + AG N+GFF+A GN FG Sbjct 203 SGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP-NSGFFNAGTGNSGFGHN 261 Query 179 N-AGNINSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGF 237 + AG+ NS NSG GNSG++N + GN+G +NTG GNSG N N G TG Sbjct 262 DPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGV 321 Query 238 FSAMTQAGPNSGFFNAGTGNSGF 260 S SGFFN GTGNSG Sbjct 322 MS--------SGFFNFGTGNSGL 336 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 99/217 (46%), Positives = 123/217 (57%), Gaps = 19/217 (8%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N G GN G+ N G N GSTN G N G N G + GN+NFGS N G+ N Sbjct 125 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 184 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGD--------GQIGIGGLNSGSGNIGFGNSGTG--- 113 FGN+G GN GF N G+ N G+G GD G I GG N G+ N GF ++ T Sbjct 185 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 244 Query 114 NVGLFNSGTGNVGF--------GNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNT 165 N G FN+GTGN GF GNSG N+GFGN+G VNT + N+G+ N G GN+ Sbjct 245 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 304 Query 166 GFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGD 202 GF++A N G G ++S F N G GNSG L +G+ Sbjct 305 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGN 341 >gi|254232497|ref|ZP_04925824.1| PPE family protein [Mycobacterium tuberculosis C] gi|124601556|gb|EAY60566.1| PPE family protein [Mycobacterium tuberculosis C] Length=382 Score = 547 bits (1409), Expect = 1e-153, Method: Compositional matrix adjust. Identities = 348/348 (100%), Positives = 348/348 (100%), Gaps = 0/348 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG Sbjct 35 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 94 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG Sbjct 95 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 154 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS Sbjct 155 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 214 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP Sbjct 215 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 274 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS Sbjct 275 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 334 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 354 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG Sbjct 335 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG 382 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 120/263 (46%), Positives = 144/263 (55%), Gaps = 38/263 (14%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N+G N G+ NVG GN G+ N G GN GN N G N GS N G Sbjct 135 FGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGNA----------GNVNTGFWNGGSTNTG 184 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 N G+GN GF + GN N G LN+G+ N FGNSG GN G N+G N Sbjct 185 LANAGAGNTGFFDAGNYN------------FGSLNAGNINSSFGNSGDGNSGFLNAGDVN 232 Query 125 VGFGNSGTANTGFGNAGNVNTGFWNGGSTNTG----LANAGAGNTGFFDA--GNYNFGSL 178 G GN+G NTG GN+GN+NTG +N G+ NTG + AG N+GFF+A GN FG Sbjct 233 SGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP-NSGFFNAGTGNSGFGHN 291 Query 179 N-AGNINSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGF 237 + AG+ NS NSG GNSG++N + GN+G +NTG GNSG N N G TG Sbjct 292 DPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGV 351 Query 238 FSAMTQAGPNSGFFNAGTGNSGF 260 S SGFFN GTGNSG Sbjct 352 MS--------SGFFNFGTGNSGL 366 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 99/217 (46%), Positives = 123/217 (57%), Gaps = 19/217 (8%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N G GN G+ N G N GSTN G N G N G + GN+NFGS N G+ N Sbjct 155 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 214 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGD--------GQIGIGGLNSGSGNIGFGNSGTG--- 113 FGN+G GN GF N G+ N G+G GD G I GG N G+ N GF ++ T Sbjct 215 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 274 Query 114 NVGLFNSGTGNVGF--------GNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNT 165 N G FN+GTGN GF GNSG N+GFGN+G VNT + N+G+ N G GN+ Sbjct 275 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 334 Query 166 GFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGD 202 GF++A N G G ++S F N G GNSG L +G+ Sbjct 335 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGN 371 >gi|183983645|ref|YP_001851936.1| PPE family protein [Mycobacterium marinum M] gi|183176971|gb|ACC42081.1| PPE family protein [Mycobacterium marinum M] Length=636 Score = 446 bits (1148), Expect = 2e-123, Method: Compositional matrix adjust. Identities = 271/347 (79%), Positives = 303/347 (88%), Gaps = 0/347 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGSQNLGSGNIGS N G GNIG+TN+GSGNIGDTNFG+GN G+ NFGSGN+GSNNIGFG Sbjct 290 NFGSQNLGSGNIGSINFGVGNIGNTNIGSGNIGDTNFGSGNIGSLNFGSGNSGSNNIGFG 349 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 N GS NFGFGNTGNNNIG GLTGDGQ GIGGLNSGSGNIG NSG N+G FNSG+GN+G Sbjct 350 NFGSSNFGFGNTGNNNIGFGLTGDGQFGIGGLNSGSGNIGLFNSGDNNIGFFNSGSGNLG 409 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 FGN+G +NTGFGNAG+VNTGFWNGGS NTG+ +AGA N GFFD+GNYN GS NAGN N+S Sbjct 410 FGNAGNSNTGFGNAGDVNTGFWNGGSINTGVGHAGATNFGFFDSGNYNAGSFNAGNSNTS 469 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSGD N+GFLNAG++NSG GNAG+VNTG N+G+INTGGFN G LNTGFFSA T AGP Sbjct 470 FGNSGDVNTGFLNAGNINSGFGNAGNVNTGWANAGDINTGGFNGGVLNTGFFSATTHAGP 529 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSG+FN GTGNSGFGHNDP+GSGNSG+QNSGFGNSGYVNTSTTS FGGNSG L+TGYGN+ Sbjct 530 NSGYFNVGTGNSGFGHNDPSGSGNSGLQNSGFGNSGYVNTSTTSTFGGNSGALDTGYGNA 589 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLF 353 GFYNAAV N G + GV +SG + GTG+SGLLV G+GLSGFFKN+ Sbjct 590 GFYNAAVQNAGFVIAGVNTSGILSSGTGSSGLLVFGDGLSGFFKNVL 636 Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 97/217 (45%), Positives = 118/217 (55%), Gaps = 19/217 (8%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N G GN G N G N GS N G G+ G TNFG ++GN+N GS N G++N Sbjct 410 FGNAGNSNTGFGNAGDVNTGFWNGGSINTGVGHAGATNFGFFDSGNYNAGSFNAGNSNTS 469 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGD--------GQIGIGGLNSGSGNIGFGNSGT---G 113 FGN+G N GF N GN N G G G+ G I GG N G N GF ++ T Sbjct 470 FGNSGDVNTGFLNAGNINSGFGNAGNVNTGWANAGDINTGGFNGGVLNTGFFSATTHAGP 529 Query 114 NVGLFNSGTGNVGF--------GNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNT 165 N G FN GTGN GF GNSG N+GFGN+G VNT + N+G + G GN Sbjct 530 NSGYFNVGTGNSGFGHNDPSGSGNSGLQNSGFGNSGYVNTSTTSTFGGNSGALDTGYGNA 589 Query 166 GFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGD 202 GF++A N G + AG S +SG G+SG L GD Sbjct 590 GFYNAAVQNAGFVIAGVNTSGILSSGTGSSGLLVFGD 626 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 93/245 (38%), Positives = 118/245 (49%), Gaps = 47/245 (19%) Query 143 VNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGD-----GNSGF 197 +N GF N GS N G N G GN G + GN NFGS N G N GN GD GN G Sbjct 224 INLGFGNIGSLNLGSGNIGDGNLGSGNIGNINFGSGNIGGTNLGGGNQGDFNLGSGNIGN 283 Query 198 L---------------NAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMT 242 L N G +N GVGN G+ N G GN G+ N G N G+LN F + Sbjct 284 LNLGSGNFGSQNLGSGNIGSINFGVGNIGNTNIGSGNIGDTNFGSGNIGSLN---FGSGN 340 Query 243 QAGPNSGFFNAGTGNSGFGHN-------------------DPAGSGNSGIQNSGFGNSGY 283 N GF N G+ N GFG+ +GSGN G+ NSG N G+ Sbjct 341 SGSNNIGFGNFGSSNFGFGNTGNNNIGFGLTGDGQFGIGGLNSGSGNIGLFNSGDNNIGF 400 Query 284 VNTSTTSMFGGNSGVLNTGYGNS-----GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGL 338 N+ + ++ GN+G NTG+GN+ GF+N NTG+ G + GFF+ G N+G Sbjct 401 FNSGSGNLGFGNAGNSNTGFGNAGDVNTGFWNGGSINTGVGHAGATNFGFFDSGNYNAGS 460 Query 339 LVSGN 343 +GN Sbjct 461 FNAGN 465 >gi|289758478|ref|ZP_06517856.1| PPE family protein [Mycobacterium tuberculosis T85] gi|289714042|gb|EFD78054.1| PPE family protein [Mycobacterium tuberculosis T85] Length=257 Score = 436 bits (1121), Expect = 3e-120, Method: Compositional matrix adjust. Identities = 256/257 (99%), Positives = 257/257 (100%), Gaps = 0/257 (0%) Query 98 LNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGL 157 +NSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGL Sbjct 1 MNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGL 60 Query 158 ANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGL 217 ANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGL Sbjct 61 ANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGL 120 Query 218 GNSGNINTGGFNPGTLNTGFFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSG 277 GNSGNINTGGFNPGTLNTGFFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSG Sbjct 121 GNSGNINTGGFNPGTLNTGFFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSG 180 Query 278 FGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSG 337 FGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSG Sbjct 181 FGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSG 240 Query 338 LLVSGNGLSGFFKNLFG 354 LLVSGNGLSGFFKNLFG Sbjct 241 LLVSGNGLSGFFKNLFG 257 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 126/262 (49%), Positives = 149/262 (57%), Gaps = 28/262 (10%) Query 6 RNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGF 65 N GS N+G GN G+ NVG N G+ NVG GN G N G GN GN N G N GS N G Sbjct 1 MNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGL 60 Query 66 GNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNV 125 N G+GN GF + GN N G LN+G+ N FGNSG GN G N+G N Sbjct 61 ANAGAGNTGFFDAGNYN------------FGSLNAGNINSSFGNSGDGNSGFLNAGDVNS 108 Query 126 GFGNSGTANTGFGNAGNVNTGFWNGGSTNTG----LANAGAGNTGFFDA--GNYNFGSLN 179 G GN+G NTG GN+GN+NTG +N G+ NTG + AG N+GFF+A GN FG + Sbjct 109 GVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP-NSGFFNAGTGNSGFGHND 167 Query 180 -AGNINSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFF 238 AG+ NS NSG GNSG++N + GN+G +NTG GNSG N N G TG Sbjct 168 PAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGVM 227 Query 239 SAMTQAGPNSGFFNAGTGNSGF 260 S SGFFN GTGNSG Sbjct 228 S--------SGFFNFGTGNSGL 241 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 99/217 (46%), Positives = 123/217 (57%), Gaps = 19/217 (8%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N G GN G+ N G N GSTN G N G N G + GN+NFGS N G+ N Sbjct 30 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 89 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGD--------GQIGIGGLNSGSGNIGFGNSGTG--- 113 FGN+G GN GF N G+ N G+G GD G I GG N G+ N GF ++ T Sbjct 90 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 149 Query 114 NVGLFNSGTGNVGF--------GNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNT 165 N G FN+GTGN GF GNSG N+GFGN+G VNT + N+G+ N G GN+ Sbjct 150 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 209 Query 166 GFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGD 202 GF++A N G G ++S F N G GNSG L +G+ Sbjct 210 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGN 246 >gi|240173463|ref|ZP_04752121.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=425 Score = 419 bits (1078), Expect = 3e-115, Method: Compositional matrix adjust. Identities = 282/347 (82%), Positives = 306/347 (89%), Gaps = 0/347 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGSQNLGSGNIGSTN+G GNIG+TNVGSGNIGDTNFGNGN GNFNFGSGN+GS+N+GFG Sbjct 79 NFGSQNLGSGNIGSTNLGGGNIGNTNVGSGNIGDTNFGNGNGGNFNFGSGNSGSSNVGFG 138 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTG+GNFGFGNTGNNNIGIGLTG+GQIG G LN+GS NIG NSG+GNVG FNSGT NVG Sbjct 139 NTGNGNFGFGNTGNNNIGIGLTGNGQIGFGALNTGSNNIGLFNSGSGNVGFFNSGTVNVG 198 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 FGNSG NTGFGNAG+VNTGFWNGGSTNTG NAGAGN GFFD+GN+N GS NAGN N+S Sbjct 199 FGNSGVGNTGFGNAGSVNTGFWNGGSTNTGAVNAGAGNFGFFDSGNFNAGSFNAGNSNTS 258 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSG+ N+GF NAGD+NSG GNAGDVNTG N+GN NTGGFN G LNTGFFSA+ GP Sbjct 259 FGNSGNVNTGFFNAGDINSGFGNAGDVNTGFANAGNTNTGGFNGGALNTGFFSAIAHPGP 318 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGFFN GTGNSGFG NDP GSGNSGIQNSGFGNSGYVNTSTTS+FGGNSG L+TGYGN+ Sbjct 319 NSGFFNVGTGNSGFGQNDPNGSGNSGIQNSGFGNSGYVNTSTTSIFGGNSGALDTGYGNA 378 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLF 353 GFYNAAV N GI + GV +SG N GTG+SGLLV GNGLSGFFKNLF Sbjct 379 GFYNAAVQNAGIAIAGVTTSGILNSGTGSSGLLVFGNGLSGFFKNLF 425 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 116/271 (43%), Positives = 146/271 (54%), Gaps = 38/271 (14%) Query 95 IGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGF-----GNSGTANTGFGNAGNVNTGFWN 149 IG LN GSGNIG N G+GNVG FN G+GN+G GN G N G GN GN N G N Sbjct 20 IGSLNLGSGNIGDTNIGSGNVGSFNLGSGNIGSTNIGGGNRGDINLGSGNVGNFNVGSGN 79 Query 150 GGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS--------------------FGN 189 GS N G N G+ N G + GN N GS N G+ N FGN Sbjct 80 FGSQNLGSGNIGSTNLGGGNIGNTNVGSGNIGDTNFGNGNGGNFNFGSGNSGSSNVGFGN 139 Query 190 SGDGNSGFLNAGDVNSGVGNAGDVNTGLG--NSGNINTGGFNPGTLNTGFFSAMTQAGPN 247 +G+GN GF N G+ N G+G G+ G G N+G+ N G FN G+ N GFF++ T N Sbjct 140 TGNGNFGFGNTGNNNIGIGLTGNGQIGFGALNTGSNNIGLFNSGSGNVGFFNSGT---VN 196 Query 248 SGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSG 307 GF N+G GN+GF GN+G N+GF N G NT + GN G ++G N+G Sbjct 197 VGFGNSGVGNTGF--------GNAGSVNTGFWNGGSTNTGAVNAGAGNFGFFDSGNFNAG 248 Query 308 FYNAAVNNTGIFVTGVMSSGFFNFGTGNSGL 338 +NA +NT +G +++GFFN G NSG Sbjct 249 SFNAGNSNTSFGNSGNVNTGFFNAGDINSGF 279 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 97/214 (46%), Positives = 115/214 (54%), Gaps = 21/214 (9%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G N G GN GS N G N GSTN G+ N G NFG ++GNFN GS N G++N Sbjct 199 FGNSGVGNTGFGNAGSVNTGFWNGGSTNTGAVNAGAGNFGFFDSGNFNAGSFNAGNSNTS 258 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGD--------GQIGIGGLNSGSGNIGF----GNSGT 112 FGN+G+ N GF N G+ N G G GD G GG N G+ N GF + G Sbjct 259 FGNSGNVNTGFFNAGDINSGFGNAGDVNTGFANAGNTNTGGFNGGALNTGFFSAIAHPGP 318 Query 113 GNVGLFNSGTGNVGF--------GNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGN 164 N G FN GTGN GF GNSG N+GFGN+G VNT + N+G + G GN Sbjct 319 -NSGFFNVGTGNSGFGQNDPNGSGNSGIQNSGFGNSGYVNTSTTSIFGGNSGALDTGYGN 377 Query 165 TGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFL 198 GF++A N G AG S NSG G+SG L Sbjct 378 AGFYNAAVQNAGIAIAGVTTSGILNSGTGSSGLL 411 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 76/189 (41%), Positives = 86/189 (46%), Gaps = 33/189 (17%) Query 183 INSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMT 242 IN FGN G N G N GD N G GN G N G GN G+ N GG N G +N G Sbjct 13 INFGFGNIGSLNLGSGNIGDTNIGSGNVGSFNLGSGNIGSTNIGGGNRGDINLG------ 66 Query 243 QAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSM----------- 291 N G FN G+GN G + GSGN G N G GN G N + ++ Sbjct 67 --SGNVGNFNVGSGNFG---SQNLGSGNIGSTNLGGGNIGNTNVGSGNIGDTNFGNGNGG 121 Query 292 ---------FGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGVMSSGF--FNFGTGNSGLLV 340 N G NTG GN GF N NN GI +TG GF N G+ N GL Sbjct 122 NFNFGSGNSGSSNVGFGNTGNGNFGFGNTGNNNIGIGLTGNGQIGFGALNTGSNNIGLFN 181 Query 341 SGNGLSGFF 349 SG+G GFF Sbjct 182 SGSGNVGFF 190 Score = 35.8 bits (81), Expect = 9.8, Method: Compositional matrix adjust. Identities = 90/230 (40%), Positives = 103/230 (45%), Gaps = 39/230 (16%) Query 124 NVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNI 183 N GFGN G+ N G GN G+ N G N GS N G N G+ N G + G+ N GS N GN Sbjct 14 NFGFGNIGSLNLGSGNIGDTNIGSGNVGSFNLGSGNIGSTNIGGGNRGDINLGSGNVGNF 73 Query 184 NSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQ 243 N GN G N G N G N G GN G+ N G SGNI F G F + Sbjct 74 NVGSGNFGSQNLGSGNIGSTNLGGGNIGNTNVG---SGNIGDTNFGNGNGGNFNFGSGNS 130 Query 244 AGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGY 303 N GF N G GN GFG+ G+ N GI +G G G+ G LNTG Sbjct 131 GSSNVGFGNTGNGNFGFGN---TGNNNIGIGLTGNGQIGF-------------GALNTGS 174 Query 304 GNSGFYNAAVNNTGIFVTGVMSSG-----FFNFGTGNSGLLVSGNGLSGF 348 N G +N SG FFN GT N G SG G +GF Sbjct 175 NNIGLFN---------------SGSGNVGFFNSGTVNVGFGNSGVGNTGF 209 >gi|306785143|ref|ZP_07423465.1| hypothetical protein TMCG_00455 [Mycobacterium tuberculosis SUMu003] gi|308330169|gb|EFP19020.1| hypothetical protein TMCG_00455 [Mycobacterium tuberculosis SUMu003] Length=557 Score = 325 bits (832), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 228/344 (67%), Positives = 260/344 (76%), Gaps = 0/344 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGS N GSGNIGS NVGSGN G+ N+ +GN GD NFG GN G+FNFG GN G+ N GFG Sbjct 214 NFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFG 273 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSG+GNIGFGNSG N+G FNSG GN+G Sbjct 274 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIG 333 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 F NSG NTGFGNAGN+NTGFWN G+ NTG +AG GN G FD GN N GS N G N+ Sbjct 334 FFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 393 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSG GN+GF NAGD N+G NAG+VNTG N G+INTGGFN G +NTGF SA+TQAG Sbjct 394 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSALTQAGA 453 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGF N GTGNSG+G++DP+G+GNSG N+G GNSG+ N + G NSG N G N+ Sbjct 454 NSGFGNLGTGNSGWGNSDPSGTGNSGFFNTGNGNSGFSNAGPAMLPGFNSGFANIGSFNA 513 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFK 350 G N+ N GI +G SSG N G+ NSG +G GLSGFF+ Sbjct 514 GIANSGNNLAGISNSGDDSSGAVNSGSQNSGAFNAGVGLSGFFR 557 Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 142/332 (43%), Positives = 177/332 (54%), Gaps = 55/332 (16%) Query 20 STNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNTGSGNFGFGNTG 79 + N+G GNIGS N+GSGNIG TN G SGN G N+G GN GS Sbjct 147 TLNLGVGNIGSLNLGSGNIGGTNVG----------SGNVGGTNLGSGNYGS--------- 187 Query 80 NNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGN 139 LN GSGN G GN+G+GN G +N G+GN G GN G+ N G N Sbjct 188 ------------------LNWGSGNTGTGNAGSGNTGDYNPGSGNFGSGNFGSGNIGSLN 229 Query 140 AGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLN 199 G+ N G N + N G N G GNTG ++NFG N G +N FGN+G GN GF N Sbjct 230 VGSGNFGTLNLANGNNGDVNFGGGNTG-----DFNFGGGNNGTLNFGFGNTGSGNFGFGN 284 Query 200 AGDVNSGVGNAGDVNTGLG--NSGNINTGGFNPGTLNTGFFSAMTQAGPNSGFFNAGTGN 257 G+ N G+G GD G+G NSG N G N G N GFF++ N GFFN+G GN Sbjct 285 TGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNS---GDGNIGFFNSGDGN 341 Query 258 SGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTG 317 +GF GN+G N+GF N+G +NT S GN G+ + G NSG +N NTG Sbjct 342 TGF--------GNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 393 Query 318 IFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFF 349 +G ++GFFN G N+G +GN +GFF Sbjct 394 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFF 425 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 137/307 (45%), Positives = 159/307 (52%), Gaps = 66/307 (21%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N+G N G N+G N G N G GN G+ N G Sbjct 314 FGNSGNNNIGFFNSGDGNIGFFNSGDGNTGFGNAGNI--------------------NTG 353 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 F N G+ N GFG+ GN N+GI DG G NSGS N+GF N+G G NSG GN Sbjct 354 FWNAGNLNTGFGSAGNGNVGI---FDG----GNSNSGSFNVGFQNTGFG-----NSGAGN 401 Query 125 VGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNIN 184 GF N+G +NTGF NAGNVNTGF+NGG NTG N G NTGF A L N Sbjct 402 TGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSA-------LTQAGAN 454 Query 185 SSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQA 244 S FGN G GNSG+ N+ SG GN+G NTG GNSG N G P L Sbjct 455 SGFGNLGTGNSGWGNSDP--SGTGNSGFFNTGNGNSGFSNAG---PAML----------P 499 Query 245 GPNSGFFNAGTGNSGFGHNDPAGSGN--SGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTG 302 G NSGF N G+ N+G A SGN +GI NSG +SG VN+ + NSG N G Sbjct 500 GFNSGFANIGSFNAGI-----ANSGNNLAGISNSGDDSSGAVNSGSQ-----NSGAFNAG 549 Query 303 YGNSGFY 309 G SGF+ Sbjct 550 VGLSGFF 556 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 104/243 (43%), Positives = 134/243 (56%), Gaps = 27/243 (11%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G N G GN G+ N G N G+ N G G+ G+ N G + GN N GS N G N G Sbjct 334 FFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 393 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 FGN+G+GN GF N G++N G N+G+ N GF N G N G FN G N Sbjct 394 FGNSGAGNTGFFNAGDSNTGF------------ANAGNVNTGFFNGGDINTGGFNGGNVN 441 Query 125 VGFGNSGT---ANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAG 181 GFG++ T AN+GFGN G N+G+ N + G GN+GFF+ GN N G NAG Sbjct 442 TGFGSALTQAGANSGFGNLGTGNSGWGNSDPS-------GTGNSGFFNTGNGNSGFSNAG 494 Query 182 N-----INSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTG 236 NS F N G N+G N+G+ +G+ N+GD ++G NSG+ N+G FN G +G Sbjct 495 PAMLPGFNSGFANIGSFNAGIANSGNNLAGISNSGDDSSGAVNSGSQNSGAFNAGVGLSG 554 Query 237 FFS 239 FF Sbjct 555 FFR 557 >gi|323719065|gb|EGB28212.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=546 Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 228/344 (67%), Positives = 260/344 (76%), Gaps = 0/344 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGS N GSGNIGS NVGSGN G+ N+ +GN GD NFG GN G+FNFG GN G+ N GFG Sbjct 203 NFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFG 262 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSG+GNIGFGNSG N+G FNSG GN+G Sbjct 263 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIG 322 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 F NSG NTGFGNAGN+NTGFWN G+ NTG +AG GN G FD GN N GS N G N+ Sbjct 323 FFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 382 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSG GN+GF NAGD N+G NAG+VNTG N G+INTGGFN G +NTGF SA+TQAG Sbjct 383 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSALTQAGA 442 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGF N GTGNSG+G++DP+G+GNSG N+G GNSG+ N + G NSG N G N+ Sbjct 443 NSGFGNLGTGNSGWGNSDPSGTGNSGFFNTGNGNSGFSNAGPAMLPGFNSGFANIGSFNA 502 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFK 350 G N+ N GI +G SSG N G+ NSG +G GLSGFF+ Sbjct 503 GIANSGNNLAGISNSGDDSSGAVNSGSQNSGAFNAGVGLSGFFR 546 Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 142/332 (43%), Positives = 177/332 (54%), Gaps = 55/332 (16%) Query 20 STNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNTGSGNFGFGNTG 79 + N+G GNIGS N+GSGNIG TN G SGN G N+G GN GS Sbjct 136 TLNLGVGNIGSLNLGSGNIGGTNVG----------SGNVGGTNLGSGNYGS--------- 176 Query 80 NNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGN 139 LN GSGN G GN+G+GN G +N G+GN G GN G+ N G N Sbjct 177 ------------------LNWGSGNTGTGNAGSGNTGDYNPGSGNFGSGNFGSGNIGSLN 218 Query 140 AGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLN 199 G+ N G N + N G N G GNTG ++NFG N G +N FGN+G GN GF N Sbjct 219 VGSGNFGTLNLANGNNGDVNFGGGNTG-----DFNFGGGNNGTLNFGFGNTGSGNFGFGN 273 Query 200 AGDVNSGVGNAGDVNTGLG--NSGNINTGGFNPGTLNTGFFSAMTQAGPNSGFFNAGTGN 257 G+ N G+G GD G+G NSG N G N G N GFF++ N GFFN+G GN Sbjct 274 TGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNS---GDGNIGFFNSGDGN 330 Query 258 SGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTG 317 +GF GN+G N+GF N+G +NT S GN G+ + G NSG +N NTG Sbjct 331 TGF--------GNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 382 Query 318 IFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFF 349 +G ++GFFN G N+G +GN +GFF Sbjct 383 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFF 414 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 137/307 (45%), Positives = 159/307 (52%), Gaps = 66/307 (21%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N+G N G N+G N G N G GN G+ N G Sbjct 303 FGNSGNNNIGFFNSGDGNIGFFNSGDGNTGFGNAGNI--------------------NTG 342 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 F N G+ N GFG+ GN N+GI DG G NSGS N+GF N+G G NSG GN Sbjct 343 FWNAGNLNTGFGSAGNGNVGI---FDG----GNSNSGSFNVGFQNTGFG-----NSGAGN 390 Query 125 VGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNIN 184 GF N+G +NTGF NAGNVNTGF+NGG NTG N G NTGF A L N Sbjct 391 TGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSA-------LTQAGAN 443 Query 185 SSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQA 244 S FGN G GNSG+ N+ SG GN+G NTG GNSG N G P L Sbjct 444 SGFGNLGTGNSGWGNSDP--SGTGNSGFFNTGNGNSGFSNAG---PAML----------P 488 Query 245 GPNSGFFNAGTGNSGFGHNDPAGSGN--SGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTG 302 G NSGF N G+ N+G A SGN +GI NSG +SG VN+ + NSG N G Sbjct 489 GFNSGFANIGSFNAGI-----ANSGNNLAGISNSGDDSSGAVNSGSQ-----NSGAFNAG 538 Query 303 YGNSGFY 309 G SGF+ Sbjct 539 VGLSGFF 545 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 104/243 (43%), Positives = 134/243 (56%), Gaps = 27/243 (11%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G N G GN G+ N G N G+ N G G+ G+ N G + GN N GS N G N G Sbjct 323 FFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 382 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 FGN+G+GN GF N G++N G N+G+ N GF N G N G FN G N Sbjct 383 FGNSGAGNTGFFNAGDSNTGF------------ANAGNVNTGFFNGGDINTGGFNGGNVN 430 Query 125 VGFGNSGT---ANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAG 181 GFG++ T AN+GFGN G N+G+ N + G GN+GFF+ GN N G NAG Sbjct 431 TGFGSALTQAGANSGFGNLGTGNSGWGNSDPS-------GTGNSGFFNTGNGNSGFSNAG 483 Query 182 N-----INSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTG 236 NS F N G N+G N+G+ +G+ N+GD ++G NSG+ N+G FN G +G Sbjct 484 PAMLPGFNSGFANIGSFNAGIANSGNNLAGISNSGDDSSGAVNSGSQNSGAFNAGVGLSG 543 Query 237 FFS 239 FF Sbjct 544 FFR 546 >gi|308375861|ref|ZP_07445342.2| putative PPE family protein [Mycobacterium tuberculosis SUMu007] gi|308377990|ref|ZP_07481164.2| putative PPE family protein [Mycobacterium tuberculosis SUMu009] gi|308344979|gb|EFP33830.1| putative PPE family protein [Mycobacterium tuberculosis SUMu007] gi|308353909|gb|EFP42760.1| putative PPE family protein [Mycobacterium tuberculosis SUMu009] Length=555 Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 228/344 (67%), Positives = 260/344 (76%), Gaps = 0/344 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGS N GSGNIGS NVGSGN G+ N+ +GN GD NFG GN G+FNFG GN G+ N GFG Sbjct 212 NFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFG 271 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSG+GNIGFGNSG N+G FNSG GN+G Sbjct 272 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIG 331 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 F NSG NTGFGNAGN+NTGFWN G+ NTG +AG GN G FD GN N GS N G N+ Sbjct 332 FFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 391 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSG GN+GF NAGD N+G NAG+VNTG N G+INTGGFN G +NTGF SA+TQAG Sbjct 392 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSALTQAGA 451 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGF N GTGNSG+G++DP+G+GNSG N+G GNSG+ N + G NSG N G N+ Sbjct 452 NSGFGNLGTGNSGWGNSDPSGTGNSGFFNTGNGNSGFSNAGPAMLPGFNSGFANIGSFNA 511 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFK 350 G N+ N GI +G SSG N G+ NSG +G GLSGFF+ Sbjct 512 GIANSGNNLAGISNSGDDSSGAVNSGSQNSGAFNAGVGLSGFFR 555 Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 142/332 (43%), Positives = 177/332 (54%), Gaps = 55/332 (16%) Query 20 STNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNTGSGNFGFGNTG 79 + N+G GNIGS N+GSGNIG TN G SGN G N+G GN GS Sbjct 145 TLNLGVGNIGSLNLGSGNIGGTNVG----------SGNVGGTNLGSGNYGS--------- 185 Query 80 NNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGN 139 LN GSGN G GN+G+GN G +N G+GN G GN G+ N G N Sbjct 186 ------------------LNWGSGNTGTGNAGSGNTGDYNPGSGNFGSGNFGSGNIGSLN 227 Query 140 AGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLN 199 G+ N G N + N G N G GNTG ++NFG N G +N FGN+G GN GF N Sbjct 228 VGSGNFGTLNLANGNNGDVNFGGGNTG-----DFNFGGGNNGTLNFGFGNTGSGNFGFGN 282 Query 200 AGDVNSGVGNAGDVNTGLG--NSGNINTGGFNPGTLNTGFFSAMTQAGPNSGFFNAGTGN 257 G+ N G+G GD G+G NSG N G N G N GFF++ N GFFN+G GN Sbjct 283 TGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNS---GDGNIGFFNSGDGN 339 Query 258 SGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTG 317 +GF GN+G N+GF N+G +NT S GN G+ + G NSG +N NTG Sbjct 340 TGF--------GNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 391 Query 318 IFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFF 349 +G ++GFFN G N+G +GN +GFF Sbjct 392 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFF 423 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 137/307 (45%), Positives = 159/307 (52%), Gaps = 66/307 (21%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N+G N G N+G N G N G GN G+ N G Sbjct 312 FGNSGNNNIGFFNSGDGNIGFFNSGDGNTGFGNAGNI--------------------NTG 351 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 F N G+ N GFG+ GN N+GI DG G NSGS N+GF N+G G NSG GN Sbjct 352 FWNAGNLNTGFGSAGNGNVGI---FDG----GNSNSGSFNVGFQNTGFG-----NSGAGN 399 Query 125 VGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNIN 184 GF N+G +NTGF NAGNVNTGF+NGG NTG N G NTGF A L N Sbjct 400 TGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSA-------LTQAGAN 452 Query 185 SSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQA 244 S FGN G GNSG+ N+ SG GN+G NTG GNSG N G P L Sbjct 453 SGFGNLGTGNSGWGNSDP--SGTGNSGFFNTGNGNSGFSNAG---PAML----------P 497 Query 245 GPNSGFFNAGTGNSGFGHNDPAGSGN--SGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTG 302 G NSGF N G+ N+G A SGN +GI NSG +SG VN+ + NSG N G Sbjct 498 GFNSGFANIGSFNAGI-----ANSGNNLAGISNSGDDSSGAVNSGSQ-----NSGAFNAG 547 Query 303 YGNSGFY 309 G SGF+ Sbjct 548 VGLSGFF 554 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 104/243 (43%), Positives = 134/243 (56%), Gaps = 27/243 (11%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G N G GN G+ N G N G+ N G G+ G+ N G + GN N GS N G N G Sbjct 332 FFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 391 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 FGN+G+GN GF N G++N G N+G+ N GF N G N G FN G N Sbjct 392 FGNSGAGNTGFFNAGDSNTGF------------ANAGNVNTGFFNGGDINTGGFNGGNVN 439 Query 125 VGFGNSGT---ANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAG 181 GFG++ T AN+GFGN G N+G+ N + G GN+GFF+ GN N G NAG Sbjct 440 TGFGSALTQAGANSGFGNLGTGNSGWGNSDPS-------GTGNSGFFNTGNGNSGFSNAG 492 Query 182 N-----INSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTG 236 NS F N G N+G N+G+ +G+ N+GD ++G NSG+ N+G FN G +G Sbjct 493 PAMLPGFNSGFANIGSFNAGIANSGNNLAGISNSGDDSSGAVNSGSQNSGAFNAGVGLSG 552 Query 237 FFS 239 FF Sbjct 553 FFR 555 >gi|306793829|ref|ZP_07432131.1| putative PPE family protein [Mycobacterium tuberculosis SUMu005] gi|308337812|gb|EFP26663.1| putative PPE family protein [Mycobacterium tuberculosis SUMu005] Length=537 Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 228/344 (67%), Positives = 260/344 (76%), Gaps = 0/344 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGS N GSGNIGS NVGSGN G+ N+ +GN GD NFG GN G+FNFG GN G+ N GFG Sbjct 194 NFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFG 253 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSG+GNIGFGNSG N+G FNSG GN+G Sbjct 254 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIG 313 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 F NSG NTGFGNAGN+NTGFWN G+ NTG +AG GN G FD GN N GS N G N+ Sbjct 314 FFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 373 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSG GN+GF NAGD N+G NAG+VNTG N G+INTGGFN G +NTGF SA+TQAG Sbjct 374 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSALTQAGA 433 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGF N GTGNSG+G++DP+G+GNSG N+G GNSG+ N + G NSG N G N+ Sbjct 434 NSGFGNLGTGNSGWGNSDPSGTGNSGFFNTGNGNSGFSNAGPAMLPGFNSGFANIGSFNA 493 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFK 350 G N+ N GI +G SSG N G+ NSG +G GLSGFF+ Sbjct 494 GIANSGNNLAGISNSGDDSSGAVNSGSQNSGAFNAGVGLSGFFR 537 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 142/332 (43%), Positives = 177/332 (54%), Gaps = 55/332 (16%) Query 20 STNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNTGSGNFGFGNTG 79 + N+G GNIGS N+GSGNIG TN G SGN G N+G GN GS Sbjct 127 TLNLGVGNIGSLNLGSGNIGGTNVG----------SGNVGGTNLGSGNYGS--------- 167 Query 80 NNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGN 139 LN GSGN G GN+G+GN G +N G+GN G GN G+ N G N Sbjct 168 ------------------LNWGSGNTGTGNAGSGNTGDYNPGSGNFGSGNFGSGNIGSLN 209 Query 140 AGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLN 199 G+ N G N + N G N G GNTG ++NFG N G +N FGN+G GN GF N Sbjct 210 VGSGNFGTLNLANGNNGDVNFGGGNTG-----DFNFGGGNNGTLNFGFGNTGSGNFGFGN 264 Query 200 AGDVNSGVGNAGDVNTGLG--NSGNINTGGFNPGTLNTGFFSAMTQAGPNSGFFNAGTGN 257 G+ N G+G GD G+G NSG N G N G N GFF++ N GFFN+G GN Sbjct 265 TGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNS---GDGNIGFFNSGDGN 321 Query 258 SGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTG 317 +GF GN+G N+GF N+G +NT S GN G+ + G NSG +N NTG Sbjct 322 TGF--------GNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 373 Query 318 IFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFF 349 +G ++GFFN G N+G +GN +GFF Sbjct 374 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFF 405 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 137/307 (45%), Positives = 159/307 (52%), Gaps = 66/307 (21%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N+G N G N+G N G N G GN G+ N G Sbjct 294 FGNSGNNNIGFFNSGDGNIGFFNSGDGNTGFGNAGNI--------------------NTG 333 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 F N G+ N GFG+ GN N+GI DG G NSGS N+GF N+G G NSG GN Sbjct 334 FWNAGNLNTGFGSAGNGNVGI---FDG----GNSNSGSFNVGFQNTGFG-----NSGAGN 381 Query 125 VGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNIN 184 GF N+G +NTGF NAGNVNTGF+NGG NTG N G NTGF A L N Sbjct 382 TGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSA-------LTQAGAN 434 Query 185 SSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQA 244 S FGN G GNSG+ N+ SG GN+G NTG GNSG N G P L Sbjct 435 SGFGNLGTGNSGWGNSDP--SGTGNSGFFNTGNGNSGFSNAG---PAML----------P 479 Query 245 GPNSGFFNAGTGNSGFGHNDPAGSGN--SGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTG 302 G NSGF N G+ N+G A SGN +GI NSG +SG VN+ + NSG N G Sbjct 480 GFNSGFANIGSFNAGI-----ANSGNNLAGISNSGDDSSGAVNSGSQ-----NSGAFNAG 529 Query 303 YGNSGFY 309 G SGF+ Sbjct 530 VGLSGFF 536 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 104/243 (43%), Positives = 134/243 (56%), Gaps = 27/243 (11%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G N G GN G+ N G N G+ N G G+ G+ N G + GN N GS N G N G Sbjct 314 FFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 373 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 FGN+G+GN GF N G++N G N+G+ N GF N G N G FN G N Sbjct 374 FGNSGAGNTGFFNAGDSNTGF------------ANAGNVNTGFFNGGDINTGGFNGGNVN 421 Query 125 VGFGNSGT---ANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAG 181 GFG++ T AN+GFGN G N+G+ N + G GN+GFF+ GN N G NAG Sbjct 422 TGFGSALTQAGANSGFGNLGTGNSGWGNSDPS-------GTGNSGFFNTGNGNSGFSNAG 474 Query 182 N-----INSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTG 236 NS F N G N+G N+G+ +G+ N+GD ++G NSG+ N+G FN G +G Sbjct 475 PAMLPGFNSGFANIGSFNAGIANSGNNLAGISNSGDDSSGAVNSGSQNSGAFNAGVGLSG 534 Query 237 FFS 239 FF Sbjct 535 FFR 537 >gi|289447996|ref|ZP_06437740.1| predicted protein [Mycobacterium tuberculosis CPHL_A] gi|289420954|gb|EFD18155.1| predicted protein [Mycobacterium tuberculosis CPHL_A] Length=616 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 228/344 (67%), Positives = 260/344 (76%), Gaps = 0/344 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGS N GSGNIGS NVGSGN G+ N+ +GN GD NFG GN G+FNFG GN G+ N GFG Sbjct 273 NFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFG 332 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSG+GNIGFGNSG N+G FNSG GN+G Sbjct 333 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIG 392 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 F NSG NTGFGNAGN+NTGFWN G+ NTG +AG GN G FD GN N GS N G N+ Sbjct 393 FFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 452 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSG GN+GF NAGD N+G NAG+VNTG N G+INTGGFN G +NTGF SA+TQAG Sbjct 453 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSALTQAGA 512 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGF N GTGNSG+G++DP+G+GNSG N+G GNSG+ N + G NSG N G N+ Sbjct 513 NSGFGNLGTGNSGWGNSDPSGTGNSGFFNTGNGNSGFSNAGPAMLPGFNSGFANIGSFNA 572 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFK 350 G N+ N GI +G SSG N G+ NSG +G GLSGFF+ Sbjct 573 GIANSGNNLAGISNSGDDSSGAVNSGSQNSGAFNAGVGLSGFFR 616 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 142/332 (43%), Positives = 177/332 (54%), Gaps = 55/332 (16%) Query 20 STNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNTGSGNFGFGNTG 79 + N+G GNIGS N+GSGNIG TN G SGN G N+G GN GS Sbjct 206 TLNLGVGNIGSLNLGSGNIGGTNVG----------SGNVGGTNLGSGNYGS--------- 246 Query 80 NNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGN 139 LN GSGN G GN+G+GN G +N G+GN G GN G+ N G N Sbjct 247 ------------------LNWGSGNTGTGNAGSGNTGDYNPGSGNFGSGNFGSGNIGSLN 288 Query 140 AGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLN 199 G+ N G N + N G N G GNTG ++NFG N G +N FGN+G GN GF N Sbjct 289 VGSGNFGTLNLANGNNGDVNFGGGNTG-----DFNFGGGNNGTLNFGFGNTGSGNFGFGN 343 Query 200 AGDVNSGVGNAGDVNTGLG--NSGNINTGGFNPGTLNTGFFSAMTQAGPNSGFFNAGTGN 257 G+ N G+G GD G+G NSG N G N G N GFF++ N GFFN+G GN Sbjct 344 TGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNS---GDGNIGFFNSGDGN 400 Query 258 SGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTG 317 +GF GN+G N+GF N+G +NT S GN G+ + G NSG +N NTG Sbjct 401 TGF--------GNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 452 Query 318 IFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFF 349 +G ++GFFN G N+G +GN +GFF Sbjct 453 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFF 484 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 137/308 (45%), Positives = 159/308 (52%), Gaps = 66/308 (21%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N+G N G N+G N G N G GN G+ N G Sbjct 373 FGNSGNNNIGFFNSGDGNIGFFNSGDGNTGFGNAGNI--------------------NTG 412 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 F N G+ N GFG+ GN N+GI DG G NSGS N+GF N+G G NSG GN Sbjct 413 FWNAGNLNTGFGSAGNGNVGI---FDG----GNSNSGSFNVGFQNTGFG-----NSGAGN 460 Query 125 VGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNIN 184 GF N+G +NTGF NAGNVNTGF+NGG NTG N G NTGF A L N Sbjct 461 TGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSA-------LTQAGAN 513 Query 185 SSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQA 244 S FGN G GNSG+ N+ SG GN+G NTG GNSG N G P L Sbjct 514 SGFGNLGTGNSGWGNSDP--SGTGNSGFFNTGNGNSGFSNAG---PAML----------P 558 Query 245 GPNSGFFNAGTGNSGFGHNDPAGSGN--SGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTG 302 G NSGF N G+ N+G A SGN +GI NSG +SG VN+ + NSG N G Sbjct 559 GFNSGFANIGSFNAGI-----ANSGNNLAGISNSGDDSSGAVNSGSQ-----NSGAFNAG 608 Query 303 YGNSGFYN 310 G SGF+ Sbjct 609 VGLSGFFR 616 >gi|31793533|ref|NP_856026.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|31619126|emb|CAD97238.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=614 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 228/344 (67%), Positives = 260/344 (76%), Gaps = 0/344 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGS N GSGNIGS NVGSGN G+ N+ +GN GD NFG GN G+FNFG GN G+ N GFG Sbjct 271 NFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFG 330 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSG+GNIGFGNSG N+G FNSG GN+G Sbjct 331 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIG 390 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 F NSG NTGFGNAGN+NTGFWN G+ NTG +AG GN G FD GN N GS N G N+ Sbjct 391 FFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 450 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSG GN+GF NAGD N+G NAG+VNTG N G+INTGGFN G +NTGF SA+TQAG Sbjct 451 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSALTQAGA 510 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGF N GTGNSG+G++DP+G+GNSG N+G GNSG+ N + G NSG N G N+ Sbjct 511 NSGFGNLGTGNSGWGNSDPSGTGNSGFFNTGNGNSGFSNAGPAMLPGFNSGFANIGSFNA 570 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFK 350 G N+ N GI +G SSG N G+ NSG +G GLSGFF+ Sbjct 571 GIANSGNNLAGISNSGDDSSGAVNSGSQNSGAFNAGVGLSGFFR 614 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 142/332 (43%), Positives = 177/332 (54%), Gaps = 55/332 (16%) Query 20 STNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNTGSGNFGFGNTG 79 + N+G GNIGS N+GSGNIG TN G SGN G N+G GN GS Sbjct 204 TLNLGVGNIGSLNLGSGNIGGTNVG----------SGNVGGTNLGSGNYGS--------- 244 Query 80 NNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGN 139 LN GSGN G GN+G+GN G +N G+GN G GN G+ N G N Sbjct 245 ------------------LNWGSGNTGTGNAGSGNTGDYNPGSGNFGSGNFGSGNIGSLN 286 Query 140 AGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLN 199 G+ N G N + N G N G GNTG ++NFG N G +N FGN+G GN GF N Sbjct 287 VGSGNFGTLNLANGNNGDVNFGGGNTG-----DFNFGGGNNGTLNFGFGNTGSGNFGFGN 341 Query 200 AGDVNSGVGNAGDVNTGLG--NSGNINTGGFNPGTLNTGFFSAMTQAGPNSGFFNAGTGN 257 G+ N G+G GD G+G NSG N G N G N GFF++ N GFFN+G GN Sbjct 342 TGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNS---GDGNIGFFNSGDGN 398 Query 258 SGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTG 317 +GF GN+G N+GF N+G +NT S GN G+ + G NSG +N NTG Sbjct 399 TGF--------GNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 450 Query 318 IFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFF 349 +G ++GFFN G N+G +GN +GFF Sbjct 451 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFF 482 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 137/308 (45%), Positives = 159/308 (52%), Gaps = 66/308 (21%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N+G N G N+G N G N G GN G+ N G Sbjct 371 FGNSGNNNIGFFNSGDGNIGFFNSGDGNTGFGNAGNI--------------------NTG 410 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 F N G+ N GFG+ GN N+GI DG G NSGS N+GF N+G G NSG GN Sbjct 411 FWNAGNLNTGFGSAGNGNVGI---FDG----GNSNSGSFNVGFQNTGFG-----NSGAGN 458 Query 125 VGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNIN 184 GF N+G +NTGF NAGNVNTGF+NGG NTG N G NTGF A L N Sbjct 459 TGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSA-------LTQAGAN 511 Query 185 SSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQA 244 S FGN G GNSG+ N+ SG GN+G NTG GNSG N G P L Sbjct 512 SGFGNLGTGNSGWGNSDP--SGTGNSGFFNTGNGNSGFSNAG---PAML----------P 556 Query 245 GPNSGFFNAGTGNSGFGHNDPAGSGN--SGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTG 302 G NSGF N G+ N+G A SGN +GI NSG +SG VN+ + NSG N G Sbjct 557 GFNSGFANIGSFNAGI-----ANSGNNLAGISNSGDDSSGAVNSGSQ-----NSGAFNAG 606 Query 303 YGNSGFYN 310 G SGF+ Sbjct 607 VGLSGFFR 614 >gi|15841868|ref|NP_336905.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|57116976|ref|YP_177872.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|148662188|ref|YP_001283711.1| PPE family protein [Mycobacterium tuberculosis H37Ra] 28 more sequence titles Length=615 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 228/344 (67%), Positives = 260/344 (76%), Gaps = 0/344 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGS N GSGNIGS NVGSGN G+ N+ +GN GD NFG GN G+FNFG GN G+ N GFG Sbjct 272 NFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFG 331 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSG+GNIGFGNSG N+G FNSG GN+G Sbjct 332 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIG 391 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 F NSG NTGFGNAGN+NTGFWN G+ NTG +AG GN G FD GN N GS N G N+ Sbjct 392 FFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 451 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSG GN+GF NAGD N+G NAG+VNTG N G+INTGGFN G +NTGF SA+TQAG Sbjct 452 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSALTQAGA 511 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGF N GTGNSG+G++DP+G+GNSG N+G GNSG+ N + G NSG N G N+ Sbjct 512 NSGFGNLGTGNSGWGNSDPSGTGNSGFFNTGNGNSGFSNAGPAMLPGFNSGFANIGSFNA 571 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFK 350 G N+ N GI +G SSG N G+ NSG +G GLSGFF+ Sbjct 572 GIANSGNNLAGISNSGDDSSGAVNSGSQNSGAFNAGVGLSGFFR 615 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 142/332 (43%), Positives = 177/332 (54%), Gaps = 55/332 (16%) Query 20 STNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNTGSGNFGFGNTG 79 + N+G GNIGS N+GSGNIG TN G SGN G N+G GN GS Sbjct 205 TLNLGVGNIGSLNLGSGNIGGTNVG----------SGNVGGTNLGSGNYGS--------- 245 Query 80 NNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGN 139 LN GSGN G GN+G+GN G +N G+GN G GN G+ N G N Sbjct 246 ------------------LNWGSGNTGTGNAGSGNTGDYNPGSGNFGSGNFGSGNIGSLN 287 Query 140 AGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLN 199 G+ N G N + N G N G GNTG ++NFG N G +N FGN+G GN GF N Sbjct 288 VGSGNFGTLNLANGNNGDVNFGGGNTG-----DFNFGGGNNGTLNFGFGNTGSGNFGFGN 342 Query 200 AGDVNSGVGNAGDVNTGLG--NSGNINTGGFNPGTLNTGFFSAMTQAGPNSGFFNAGTGN 257 G+ N G+G GD G+G NSG N G N G N GFF++ N GFFN+G GN Sbjct 343 TGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNS---GDGNIGFFNSGDGN 399 Query 258 SGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTG 317 +GF GN+G N+GF N+G +NT S GN G+ + G NSG +N NTG Sbjct 400 TGF--------GNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 451 Query 318 IFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFF 349 +G ++GFFN G N+G +GN +GFF Sbjct 452 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFF 483 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 137/308 (45%), Positives = 159/308 (52%), Gaps = 66/308 (21%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N+G N G N+G N G N G GN G+ N G Sbjct 372 FGNSGNNNIGFFNSGDGNIGFFNSGDGNTGFGNAGNI--------------------NTG 411 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 F N G+ N GFG+ GN N+GI DG G NSGS N+GF N+G G NSG GN Sbjct 412 FWNAGNLNTGFGSAGNGNVGI---FDG----GNSNSGSFNVGFQNTGFG-----NSGAGN 459 Query 125 VGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNIN 184 GF N+G +NTGF NAGNVNTGF+NGG NTG N G NTGF A L N Sbjct 460 TGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSA-------LTQAGAN 512 Query 185 SSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQA 244 S FGN G GNSG+ N+ SG GN+G NTG GNSG N G P L Sbjct 513 SGFGNLGTGNSGWGNSDP--SGTGNSGFFNTGNGNSGFSNAG---PAML----------P 557 Query 245 GPNSGFFNAGTGNSGFGHNDPAGSGN--SGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTG 302 G NSGF N G+ N+G A SGN +GI NSG +SG VN+ + NSG N G Sbjct 558 GFNSGFANIGSFNAGI-----ANSGNNLAGISNSGDDSSGAVNSGSQ-----NSGAFNAG 607 Query 303 YGNSGFYN 310 G SGF+ Sbjct 608 VGLSGFFR 615 >gi|306789504|ref|ZP_07427826.1| putative PPE family protein [Mycobacterium tuberculosis SUMu004] gi|308334010|gb|EFP22861.1| putative PPE family protein [Mycobacterium tuberculosis SUMu004] Length=587 Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 228/344 (67%), Positives = 260/344 (76%), Gaps = 0/344 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGS N GSGNIGS NVGSGN G+ N+ +GN GD NFG GN G+FNFG GN G+ N GFG Sbjct 244 NFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFG 303 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSG+GNIGFGNSG N+G FNSG GN+G Sbjct 304 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIG 363 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 F NSG NTGFGNAGN+NTGFWN G+ NTG +AG GN G FD GN N GS N G N+ Sbjct 364 FFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 423 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSG GN+GF NAGD N+G NAG+VNTG N G+INTGGFN G +NTGF SA+TQAG Sbjct 424 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSALTQAGA 483 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGF N GTGNSG+G++DP+G+GNSG N+G GNSG+ N + G NSG N G N+ Sbjct 484 NSGFGNLGTGNSGWGNSDPSGTGNSGFFNTGNGNSGFSNAGPAMLPGFNSGFANIGSFNA 543 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFK 350 G N+ N GI +G SSG N G+ NSG +G GLSGFF+ Sbjct 544 GIANSGNNLAGISNSGDDSSGAVNSGSQNSGAFNAGVGLSGFFR 587 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 142/332 (43%), Positives = 177/332 (54%), Gaps = 55/332 (16%) Query 20 STNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNTGSGNFGFGNTG 79 + N+G GNIGS N+GSGNIG TN G SGN G N+G GN GS Sbjct 177 TLNLGVGNIGSLNLGSGNIGGTNVG----------SGNVGGTNLGSGNYGS--------- 217 Query 80 NNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGN 139 LN GSGN G GN+G+GN G +N G+GN G GN G+ N G N Sbjct 218 ------------------LNWGSGNTGTGNAGSGNTGDYNPGSGNFGSGNFGSGNIGSLN 259 Query 140 AGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLN 199 G+ N G N + N G N G GNTG ++NFG N G +N FGN+G GN GF N Sbjct 260 VGSGNFGTLNLANGNNGDVNFGGGNTG-----DFNFGGGNNGTLNFGFGNTGSGNFGFGN 314 Query 200 AGDVNSGVGNAGDVNTGLG--NSGNINTGGFNPGTLNTGFFSAMTQAGPNSGFFNAGTGN 257 G+ N G+G GD G+G NSG N G N G N GFF++ N GFFN+G GN Sbjct 315 TGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNS---GDGNIGFFNSGDGN 371 Query 258 SGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTG 317 +GF GN+G N+GF N+G +NT S GN G+ + G NSG +N NTG Sbjct 372 TGF--------GNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 423 Query 318 IFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFF 349 +G ++GFFN G N+G +GN +GFF Sbjct 424 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFF 455 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 137/308 (45%), Positives = 159/308 (52%), Gaps = 66/308 (21%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N+G N G N+G N G N G GN G+ N G Sbjct 344 FGNSGNNNIGFFNSGDGNIGFFNSGDGNTGFGNAGNI--------------------NTG 383 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 F N G+ N GFG+ GN N+GI DG G NSGS N+GF N+G G NSG GN Sbjct 384 FWNAGNLNTGFGSAGNGNVGI---FDG----GNSNSGSFNVGFQNTGFG-----NSGAGN 431 Query 125 VGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNIN 184 GF N+G +NTGF NAGNVNTGF+NGG NTG N G NTGF A L N Sbjct 432 TGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSA-------LTQAGAN 484 Query 185 SSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQA 244 S FGN G GNSG+ N+ SG GN+G NTG GNSG N G P L Sbjct 485 SGFGNLGTGNSGWGNSDP--SGTGNSGFFNTGNGNSGFSNAG---PAML----------P 529 Query 245 GPNSGFFNAGTGNSGFGHNDPAGSGN--SGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTG 302 G NSGF N G+ N+G A SGN +GI NSG +SG VN+ + NSG N G Sbjct 530 GFNSGFANIGSFNAGI-----ANSGNNLAGISNSGDDSSGAVNSGSQ-----NSGAFNAG 579 Query 303 YGNSGFYN 310 G SGF+ Sbjct 580 VGLSGFFR 587 >gi|308232111|ref|ZP_07414958.2| hypothetical protein TMAG_02915 [Mycobacterium tuberculosis SUMu001] gi|308214940|gb|EFO74339.1| hypothetical protein TMAG_02915 [Mycobacterium tuberculosis SUMu001] Length=555 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 228/344 (67%), Positives = 260/344 (76%), Gaps = 0/344 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGS N GSGNIGS NVGSGN G+ N+ +GN GD NFG GN G+FNFG GN G+ N GFG Sbjct 212 NFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFG 271 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSG+GNIGFGNSG N+G FNSG GN+G Sbjct 272 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIG 331 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 F NSG NTGFGNAGN+NTGFWN G+ NTG +AG GN G FD GN N GS N G N+ Sbjct 332 FFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 391 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSG GN+GF NAGD N+G NAG+VNTG N G+INTGGFN G +NTGF SA+TQAG Sbjct 392 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSALTQAGA 451 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGF N GTGNSG+G++DP+G+GNSG N+G GNSG+ N + G NSG N G N+ Sbjct 452 NSGFGNLGTGNSGWGNSDPSGTGNSGFFNTGNGNSGFSNAGPAMLPGFNSGFANIGSFNA 511 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFK 350 G N+ N GI +G SSG N G+ NSG +G GLSGFF+ Sbjct 512 GIANSGNNLAGISNSGDDSSGAVNSGSQNSGAFNAGVGLSGFFR 555 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 142/332 (43%), Positives = 177/332 (54%), Gaps = 55/332 (16%) Query 20 STNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNTGSGNFGFGNTG 79 + N+G GNIGS N+GSGNIG TN G SGN G N+G GN GS Sbjct 145 TLNLGVGNIGSLNLGSGNIGGTNVG----------SGNVGGTNLGSGNYGS--------- 185 Query 80 NNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGN 139 LN GSGN G GN+G+GN G +N G+GN G GN G+ N G N Sbjct 186 ------------------LNWGSGNTGTGNAGSGNTGDYNPGSGNFGSGNFGSGNIGSLN 227 Query 140 AGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLN 199 G+ N G N + N G N G GNTG ++NFG N G +N FGN+G GN GF N Sbjct 228 VGSGNFGTLNLANGNNGDVNFGGGNTG-----DFNFGGGNNGTLNFGFGNTGSGNFGFGN 282 Query 200 AGDVNSGVGNAGDVNTGLG--NSGNINTGGFNPGTLNTGFFSAMTQAGPNSGFFNAGTGN 257 G+ N G+G GD G+G NSG N G N G N GFF++ N GFFN+G GN Sbjct 283 TGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNS---GDGNIGFFNSGDGN 339 Query 258 SGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTG 317 +GF GN+G N+GF N+G +NT S GN G+ + G NSG +N NTG Sbjct 340 TGF--------GNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 391 Query 318 IFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFF 349 +G ++GFFN G N+G +GN +GFF Sbjct 392 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFF 423 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 137/307 (45%), Positives = 159/307 (52%), Gaps = 66/307 (21%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N+G N G N+G N G N G GN G+ N G Sbjct 312 FGNSGNNNIGFFNSGDGNIGFFNSGDGNTGFGNAGNI--------------------NTG 351 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 F N G+ N GFG+ GN N+GI DG G NSGS N+GF N+G G NSG GN Sbjct 352 FWNAGNLNTGFGSAGNGNVGI---FDG----GNSNSGSFNVGFQNTGFG-----NSGAGN 399 Query 125 VGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNIN 184 GF N+G +NTGF NAGNVNTGF+NGG NTG N G NTGF A L N Sbjct 400 TGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSA-------LTQAGAN 452 Query 185 SSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQA 244 S FGN G GNSG+ N+ SG GN+G NTG GNSG N G P L Sbjct 453 SGFGNLGTGNSGWGNSDP--SGTGNSGFFNTGNGNSGFSNAG---PAML----------P 497 Query 245 GPNSGFFNAGTGNSGFGHNDPAGSGN--SGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTG 302 G NSGF N G+ N+G A SGN +GI NSG +SG VN+ + NSG N G Sbjct 498 GFNSGFANIGSFNAGI-----ANSGNNLAGISNSGDDSSGAVNSGSQ-----NSGAFNAG 547 Query 303 YGNSGFY 309 G SGF+ Sbjct 548 VGLSGFF 554 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 103/246 (42%), Positives = 130/246 (53%), Gaps = 33/246 (13%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G N G GN G+ N G N G+ N G G+ G+ N G + GN N GS N G N G Sbjct 332 FFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 391 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 FGN+G+GN GF N+G N GF N+G N G FN G N Sbjct 392 FGNSGAGNTGF----------------------FNAGDSNTGFANAGNVNTGFFNGGDIN 429 Query 125 VGFGNSGTANTGFGNA---GNVNTGFWNGGSTNTGLAN---AGAGNTGFFDAGNYNFGSL 178 G N G NTGFG+A N+GF N G+ N+G N +G GN+GFF+ GN N G Sbjct 430 TGGFNGGNVNTGFGSALTQAGANSGFGNLGTGNSGWGNSDPSGTGNSGFFNTGNGNSGFS 489 Query 179 NAGN-----INSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTL 233 NAG NS F N G N+G N+G+ +G+ N+GD ++G NSG+ N+G FN G Sbjct 490 NAGPAMLPGFNSGFANIGSFNAGIANSGNNLAGISNSGDDSSGAVNSGSQNSGAFNAGVG 549 Query 234 NTGFFS 239 +GFF Sbjct 550 LSGFFR 555 >gi|306780393|ref|ZP_07418730.1| hypothetical protein TMBG_00900 [Mycobacterium tuberculosis SUMu002] gi|308326740|gb|EFP15591.1| hypothetical protein TMBG_00900 [Mycobacterium tuberculosis SUMu002] Length=542 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 228/344 (67%), Positives = 260/344 (76%), Gaps = 0/344 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGS N GSGNIGS NVGSGN G+ N+ +GN GD NFG GN G+FNFG GN G+ N GFG Sbjct 199 NFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFG 258 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSG+GNIGFGNSG N+G FNSG GN+G Sbjct 259 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIG 318 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 F NSG NTGFGNAGN+NTGFWN G+ NTG +AG GN G FD GN N GS N G N+ Sbjct 319 FFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 378 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSG GN+GF NAGD N+G NAG+VNTG N G+INTGGFN G +NTGF SA+TQAG Sbjct 379 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSALTQAGA 438 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGF N GTGNSG+G++DP+G+GNSG N+G GNSG+ N + G NSG N G N+ Sbjct 439 NSGFGNLGTGNSGWGNSDPSGTGNSGFFNTGNGNSGFSNAGPAMLPGFNSGFANIGSFNA 498 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFK 350 G N+ N GI +G SSG N G+ NSG +G GLSGFF+ Sbjct 499 GIANSGNNLAGISNSGDDSSGAVNSGSQNSGAFNAGVGLSGFFR 542 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 142/332 (43%), Positives = 177/332 (54%), Gaps = 55/332 (16%) Query 20 STNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNTGSGNFGFGNTG 79 + N+G GNIGS N+GSGNIG TN G SGN G N+G GN GS Sbjct 132 TLNLGVGNIGSLNLGSGNIGGTNVG----------SGNVGGTNLGSGNYGS--------- 172 Query 80 NNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGN 139 LN GSGN G GN+G+GN G +N G+GN G GN G+ N G N Sbjct 173 ------------------LNWGSGNTGTGNAGSGNTGDYNPGSGNFGSGNFGSGNIGSLN 214 Query 140 AGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLN 199 G+ N G N + N G N G GNTG ++NFG N G +N FGN+G GN GF N Sbjct 215 VGSGNFGTLNLANGNNGDVNFGGGNTG-----DFNFGGGNNGTLNFGFGNTGSGNFGFGN 269 Query 200 AGDVNSGVGNAGDVNTGLG--NSGNINTGGFNPGTLNTGFFSAMTQAGPNSGFFNAGTGN 257 G+ N G+G GD G+G NSG N G N G N GFF++ N GFFN+G GN Sbjct 270 TGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNS---GDGNIGFFNSGDGN 326 Query 258 SGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTG 317 +GF GN+G N+GF N+G +NT S GN G+ + G NSG +N NTG Sbjct 327 TGF--------GNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 378 Query 318 IFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFF 349 +G ++GFFN G N+G +GN +GFF Sbjct 379 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFF 410 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 137/307 (45%), Positives = 159/307 (52%), Gaps = 66/307 (21%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N+G N G N+G N G N G GN G+ N G Sbjct 299 FGNSGNNNIGFFNSGDGNIGFFNSGDGNTGFGNAGNI--------------------NTG 338 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 F N G+ N GFG+ GN N+GI DG G NSGS N+GF N+G G NSG GN Sbjct 339 FWNAGNLNTGFGSAGNGNVGI---FDG----GNSNSGSFNVGFQNTGFG-----NSGAGN 386 Query 125 VGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNIN 184 GF N+G +NTGF NAGNVNTGF+NGG NTG N G NTGF A L N Sbjct 387 TGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSA-------LTQAGAN 439 Query 185 SSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQA 244 S FGN G GNSG+ N+ SG GN+G NTG GNSG N G P L Sbjct 440 SGFGNLGTGNSGWGNSDP--SGTGNSGFFNTGNGNSGFSNAG---PAML----------P 484 Query 245 GPNSGFFNAGTGNSGFGHNDPAGSGN--SGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTG 302 G NSGF N G+ N+G A SGN +GI NSG +SG VN+ + NSG N G Sbjct 485 GFNSGFANIGSFNAGI-----ANSGNNLAGISNSGDDSSGAVNSGSQ-----NSGAFNAG 534 Query 303 YGNSGFY 309 G SGF+ Sbjct 535 VGLSGFF 541 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 103/246 (42%), Positives = 130/246 (53%), Gaps = 33/246 (13%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G N G GN G+ N G N G+ N G G+ G+ N G + GN N GS N G N G Sbjct 319 FFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 378 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 FGN+G+GN GF N+G N GF N+G N G FN G N Sbjct 379 FGNSGAGNTGF----------------------FNAGDSNTGFANAGNVNTGFFNGGDIN 416 Query 125 VGFGNSGTANTGFGNA---GNVNTGFWNGGSTNTGLAN---AGAGNTGFFDAGNYNFGSL 178 G N G NTGFG+A N+GF N G+ N+G N +G GN+GFF+ GN N G Sbjct 417 TGGFNGGNVNTGFGSALTQAGANSGFGNLGTGNSGWGNSDPSGTGNSGFFNTGNGNSGFS 476 Query 179 NAGN-----INSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTL 233 NAG NS F N G N+G N+G+ +G+ N+GD ++G NSG+ N+G FN G Sbjct 477 NAGPAMLPGFNSGFANIGSFNAGIANSGNNLAGISNSGDDSSGAVNSGSQNSGAFNAGVG 536 Query 234 NTGFFS 239 +GFF Sbjct 537 LSGFFR 542 >gi|308376988|ref|ZP_07440770.2| putative PPE family protein [Mycobacterium tuberculosis SUMu008] gi|308349290|gb|EFP38141.1| putative PPE family protein [Mycobacterium tuberculosis SUMu008] Length=567 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 228/344 (67%), Positives = 260/344 (76%), Gaps = 0/344 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGS N GSGNIGS NVGSGN G+ N+ +GN GD NFG GN G+FNFG GN G+ N GFG Sbjct 224 NFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFG 283 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSG+GNIGFGNSG N+G FNSG GN+G Sbjct 284 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIG 343 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 F NSG NTGFGNAGN+NTGFWN G+ NTG +AG GN G FD GN N GS N G N+ Sbjct 344 FFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 403 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSG GN+GF NAGD N+G NAG+VNTG N G+INTGGFN G +NTGF SA+TQAG Sbjct 404 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSALTQAGA 463 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGF N GTGNSG+G++DP+G+GNSG N+G GNSG+ N + G NSG N G N+ Sbjct 464 NSGFGNLGTGNSGWGNSDPSGTGNSGFFNTGNGNSGFSNAGPAMLPGFNSGFANIGSFNA 523 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFK 350 G N+ N GI +G SSG N G+ NSG +G GLSGFF+ Sbjct 524 GIANSGNNLAGISNSGDDSSGAVNSGSQNSGAFNAGVGLSGFFR 567 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 142/332 (43%), Positives = 177/332 (54%), Gaps = 55/332 (16%) Query 20 STNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNTGSGNFGFGNTG 79 + N+G GNIGS N+GSGNIG TN G SGN G N+G GN GS Sbjct 157 TLNLGVGNIGSLNLGSGNIGGTNVG----------SGNVGGTNLGSGNYGS--------- 197 Query 80 NNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGN 139 LN GSGN G GN+G+GN G +N G+GN G GN G+ N G N Sbjct 198 ------------------LNWGSGNTGTGNAGSGNTGDYNPGSGNFGSGNFGSGNIGSLN 239 Query 140 AGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLN 199 G+ N G N + N G N G GNTG ++NFG N G +N FGN+G GN GF N Sbjct 240 VGSGNFGTLNLANGNNGDVNFGGGNTG-----DFNFGGGNNGTLNFGFGNTGSGNFGFGN 294 Query 200 AGDVNSGVGNAGDVNTGLG--NSGNINTGGFNPGTLNTGFFSAMTQAGPNSGFFNAGTGN 257 G+ N G+G GD G+G NSG N G N G N GFF++ N GFFN+G GN Sbjct 295 TGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNS---GDGNIGFFNSGDGN 351 Query 258 SGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTG 317 +GF GN+G N+GF N+G +NT S GN G+ + G NSG +N NTG Sbjct 352 TGF--------GNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 403 Query 318 IFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFF 349 +G ++GFFN G N+G +GN +GFF Sbjct 404 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFF 435 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 137/307 (45%), Positives = 159/307 (52%), Gaps = 66/307 (21%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N+G N G N+G N G N G GN G+ N G Sbjct 324 FGNSGNNNIGFFNSGDGNIGFFNSGDGNTGFGNAGNI--------------------NTG 363 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 F N G+ N GFG+ GN N+GI DG G NSGS N+GF N+G G NSG GN Sbjct 364 FWNAGNLNTGFGSAGNGNVGI---FDG----GNSNSGSFNVGFQNTGFG-----NSGAGN 411 Query 125 VGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNIN 184 GF N+G +NTGF NAGNVNTGF+NGG NTG N G NTGF A L N Sbjct 412 TGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSA-------LTQAGAN 464 Query 185 SSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQA 244 S FGN G GNSG+ N+ SG GN+G NTG GNSG N G P L Sbjct 465 SGFGNLGTGNSGWGNSDP--SGTGNSGFFNTGNGNSGFSNAG---PAML----------P 509 Query 245 GPNSGFFNAGTGNSGFGHNDPAGSGN--SGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTG 302 G NSGF N G+ N+G A SGN +GI NSG +SG VN+ + NSG N G Sbjct 510 GFNSGFANIGSFNAGI-----ANSGNNLAGISNSGDDSSGAVNSGSQ-----NSGAFNAG 559 Query 303 YGNSGFY 309 G SGF+ Sbjct 560 VGLSGFF 566 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 104/243 (43%), Positives = 134/243 (56%), Gaps = 27/243 (11%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G N G GN G+ N G N G+ N G G+ G+ N G + GN N GS N G N G Sbjct 344 FFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 403 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 FGN+G+GN GF N G++N G N+G+ N GF N G N G FN G N Sbjct 404 FGNSGAGNTGFFNAGDSNTGF------------ANAGNVNTGFFNGGDINTGGFNGGNVN 451 Query 125 VGFGNSGT---ANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAG 181 GFG++ T AN+GFGN G N+G+ N + G GN+GFF+ GN N G NAG Sbjct 452 TGFGSALTQAGANSGFGNLGTGNSGWGNSDPS-------GTGNSGFFNTGNGNSGFSNAG 504 Query 182 N-----INSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTG 236 NS F N G N+G N+G+ +G+ N+GD ++G NSG+ N+G FN G +G Sbjct 505 PAMLPGFNSGFANIGSFNAGIANSGNNLAGISNSGDDSSGAVNSGSQNSGAFNAGVGLSG 564 Query 237 FFS 239 FF Sbjct 565 FFR 567 >gi|289762522|ref|ZP_06521900.1| PPE family protein [Mycobacterium tuberculosis GM 1503] gi|289710028|gb|EFD74044.1| PPE family protein [Mycobacterium tuberculosis GM 1503] Length=561 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 228/344 (67%), Positives = 260/344 (76%), Gaps = 0/344 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGS N GSGNIGS NVGSGN G+ N+ +GN GD NFG GN G+FNFG GN G+ N GFG Sbjct 218 NFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFG 277 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSG+GNIGFGNSG N+G FNSG GN+G Sbjct 278 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIG 337 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 F NSG NTGFGNAGN+NTGFWN G+ NTG +AG GN G FD GN N GS N G N+ Sbjct 338 FFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 397 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSG GN+GF NAGD N+G NAG+VNTG N G+INTGGFN G +NTGF SA+TQAG Sbjct 398 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSALTQAGA 457 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGF N GTGNSG+G++DP+G+GNSG N+G GNSG+ N + G NSG N G N+ Sbjct 458 NSGFGNLGTGNSGWGNSDPSGTGNSGFFNTGNGNSGFSNAGPAMLPGFNSGFANIGSFNA 517 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFK 350 G N+ N GI +G SSG N G+ NSG +G GLSGFF+ Sbjct 518 GIANSGNNLAGISNSGDDSSGAVNSGSQNSGAFNAGVGLSGFFR 561 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 142/332 (43%), Positives = 177/332 (54%), Gaps = 55/332 (16%) Query 20 STNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNTGSGNFGFGNTG 79 + N+G GNIGS N+GSGNIG TN G SGN G N+G GN GS Sbjct 151 TLNLGVGNIGSLNLGSGNIGGTNVG----------SGNVGGTNLGSGNYGS--------- 191 Query 80 NNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGN 139 LN GSGN G GN+G+GN G +N G+GN G GN G+ N G N Sbjct 192 ------------------LNWGSGNTGTGNAGSGNTGDYNPGSGNFGSGNFGSGNIGSLN 233 Query 140 AGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLN 199 G+ N G N + N G N G GNTG ++NFG N G +N FGN+G GN GF N Sbjct 234 VGSGNFGTLNLANGNNGDVNFGGGNTG-----DFNFGGGNNGTLNFGFGNTGSGNFGFGN 288 Query 200 AGDVNSGVGNAGDVNTGLG--NSGNINTGGFNPGTLNTGFFSAMTQAGPNSGFFNAGTGN 257 G+ N G+G GD G+G NSG N G N G N GFF++ N GFFN+G GN Sbjct 289 TGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNS---GDGNIGFFNSGDGN 345 Query 258 SGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTG 317 +GF GN+G N+GF N+G +NT S GN G+ + G NSG +N NTG Sbjct 346 TGF--------GNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 397 Query 318 IFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFF 349 +G ++GFFN G N+G +GN +GFF Sbjct 398 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFF 429 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 137/307 (45%), Positives = 159/307 (52%), Gaps = 66/307 (21%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N+G N G N+G N G N G GN G+ N G Sbjct 318 FGNSGNNNIGFFNSGDGNIGFFNSGDGNTGFGNAGNI--------------------NTG 357 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 F N G+ N GFG+ GN N+GI DG G NSGS N+GF N+G G NSG GN Sbjct 358 FWNAGNLNTGFGSAGNGNVGI---FDG----GNSNSGSFNVGFQNTGFG-----NSGAGN 405 Query 125 VGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNIN 184 GF N+G +NTGF NAGNVNTGF+NGG NTG N G NTGF A L N Sbjct 406 TGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSA-------LTQAGAN 458 Query 185 SSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQA 244 S FGN G GNSG+ N+ SG GN+G NTG GNSG N G P L Sbjct 459 SGFGNLGTGNSGWGNSDP--SGTGNSGFFNTGNGNSGFSNAG---PAML----------P 503 Query 245 GPNSGFFNAGTGNSGFGHNDPAGSGN--SGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTG 302 G NSGF N G+ N+G A SGN +GI NSG +SG VN+ + NSG N G Sbjct 504 GFNSGFANIGSFNAGI-----ANSGNNLAGISNSGDDSSGAVNSGSQ-----NSGAFNAG 553 Query 303 YGNSGFY 309 G SGF+ Sbjct 554 VGLSGFF 560 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 104/243 (43%), Positives = 134/243 (56%), Gaps = 27/243 (11%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G N G GN G+ N G N G+ N G G+ G+ N G + GN N GS N G N G Sbjct 338 FFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 397 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 FGN+G+GN GF N G++N G N+G+ N GF N G N G FN G N Sbjct 398 FGNSGAGNTGFFNAGDSNTGF------------ANAGNVNTGFFNGGDINTGGFNGGNVN 445 Query 125 VGFGNSGT---ANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAG 181 GFG++ T AN+GFGN G N+G+ N + G GN+GFF+ GN N G NAG Sbjct 446 TGFGSALTQAGANSGFGNLGTGNSGWGNSDPS-------GTGNSGFFNTGNGNSGFSNAG 498 Query 182 N-----INSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTG 236 NS F N G N+G N+G+ +G+ N+GD ++G NSG+ N+G FN G +G Sbjct 499 PAMLPGFNSGFANIGSFNAGIANSGNNLAGISNSGDDSSGAVNSGSQNSGAFNAGVGLSG 558 Query 237 FFS 239 FF Sbjct 559 FFR 561 >gi|254365133|ref|ZP_04981179.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] gi|297731949|ref|ZP_06961067.1| PPE family protein [Mycobacterium tuberculosis KZN R506] gi|134150647|gb|EBA42692.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] Length=614 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 228/344 (67%), Positives = 260/344 (76%), Gaps = 0/344 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGS N GSGNIGS NVGSGN G+ N+ +GN GD NFG GN G+FNFG GN G+ N GFG Sbjct 271 NFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFG 330 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSG+GNIGFGNSG N+G FNSG GN+G Sbjct 331 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIG 390 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 F NSG NTGFGNAGN+NTGFWN G+ NTG +AG GN G FD GN N GS N G N+ Sbjct 391 FFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 450 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSG GN+GF NAGD N+G NAG+VNTG N G+INTGGFN G +NTGF SA+TQAG Sbjct 451 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSALTQAGA 510 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGF N GTGNSG+G++DP+G+GNSG N+G GNSG+ N + G NSG N G N+ Sbjct 511 NSGFGNLGTGNSGWGNSDPSGTGNSGFFNTGNGNSGFSNAGPAMLPGFNSGFANIGSFNA 570 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFK 350 G N+ N GI +G SSG N G+ NSG +G GLSGFF+ Sbjct 571 GIANSGNNLAGISNSGDDSSGAVNSGSQNSGAFNAGVGLSGFFR 614 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 142/332 (43%), Positives = 177/332 (54%), Gaps = 55/332 (16%) Query 20 STNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNTGSGNFGFGNTG 79 + N+G GNIGS N+GSGNIG TN G SGN G N+G GN GS Sbjct 204 TLNLGVGNIGSLNLGSGNIGGTNVG----------SGNVGGTNLGSGNYGS--------- 244 Query 80 NNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGN 139 LN GSGN G GN+G+GN G +N G+GN G GN G+ N G N Sbjct 245 ------------------LNWGSGNTGTGNAGSGNTGDYNPGSGNFGSGNFGSGNIGSLN 286 Query 140 AGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLN 199 G+ N G N + N G N G GNTG ++NFG N G +N FGN+G GN GF N Sbjct 287 VGSGNFGTLNLANGNNGDVNFGGGNTG-----DFNFGGGNNGTLNFGFGNTGSGNFGFGN 341 Query 200 AGDVNSGVGNAGDVNTGLG--NSGNINTGGFNPGTLNTGFFSAMTQAGPNSGFFNAGTGN 257 G+ N G+G GD G+G NSG N G N G N GFF++ N GFFN+G GN Sbjct 342 TGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNS---GDGNIGFFNSGDGN 398 Query 258 SGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTG 317 +GF GN+G N+GF N+G +NT S GN G+ + G NSG +N NTG Sbjct 399 TGF--------GNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 450 Query 318 IFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFF 349 +G ++GFFN G N+G +GN +GFF Sbjct 451 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFF 482 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 137/308 (45%), Positives = 159/308 (52%), Gaps = 66/308 (21%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N+G N G N+G N G N G GN G+ N G Sbjct 371 FGNSGNNNIGFFNSGDGNIGFFNSGDGNTGFGNAGNI--------------------NTG 410 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 F N G+ N GFG+ GN N+GI DG G NSGS N+GF N+G G NSG GN Sbjct 411 FWNAGNLNTGFGSAGNGNVGI---FDG----GNSNSGSFNVGFQNTGFG-----NSGAGN 458 Query 125 VGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNIN 184 GF N+G +NTGF NAGNVNTGF+NGG NTG N G NTGF A L N Sbjct 459 TGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSA-------LTQAGAN 511 Query 185 SSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQA 244 S FGN G GNSG+ N+ SG GN+G NTG GNSG N G P L Sbjct 512 SGFGNLGTGNSGWGNSDP--SGTGNSGFFNTGNGNSGFSNAG---PAML----------P 556 Query 245 GPNSGFFNAGTGNSGFGHNDPAGSGN--SGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTG 302 G NSGF N G+ N+G A SGN +GI NSG +SG VN+ + NSG N G Sbjct 557 GFNSGFANIGSFNAGI-----ANSGNNLAGISNSGDDSSGAVNSGSQ-----NSGAFNAG 606 Query 303 YGNSGFYN 310 G SGF+ Sbjct 607 VGLSGFFR 614 >gi|254232498|ref|ZP_04925825.1| PPE family protein [Mycobacterium tuberculosis C] gi|124601557|gb|EAY60567.1| PPE family protein [Mycobacterium tuberculosis C] Length=600 Score = 323 bits (828), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 228/344 (67%), Positives = 260/344 (76%), Gaps = 0/344 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGS N GSGNIGS NVGSGN G+ N+ +GN GD NFG GN G+FNFG GN G+ N GFG Sbjct 257 NFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFG 316 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSG+GNIGFGNSG N+G FNSG GN+G Sbjct 317 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIG 376 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 F NSG NTGFGNAGN+NTGFWN G+ NTG +AG GN G FD GN N GS N G N+ Sbjct 377 FFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 436 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSG GN+GF NAGD N+G NAG+VNTG N G+INTGGFN G +NTGF SA+TQAG Sbjct 437 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSALTQAGA 496 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGF N GTGNSG+G++DP+G+GNSG N+G GNSG+ N + G NSG N G N+ Sbjct 497 NSGFGNLGTGNSGWGNSDPSGTGNSGFFNTGNGNSGFSNAGPAMLPGFNSGFANIGSFNA 556 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFK 350 G N+ N GI +G SSG N G+ NSG +G GLSGFF+ Sbjct 557 GIANSGNNLAGISNSGDDSSGAVNSGSQNSGAFNAGVGLSGFFR 600 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 142/332 (43%), Positives = 177/332 (54%), Gaps = 55/332 (16%) Query 20 STNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNTGSGNFGFGNTG 79 + N+G GNIGS N+GSGNIG TN G SGN G N+G GN GS Sbjct 190 TLNLGVGNIGSLNLGSGNIGGTNVG----------SGNVGGTNLGSGNYGS--------- 230 Query 80 NNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGN 139 LN GSGN G GN+G+GN G +N G+GN G GN G+ N G N Sbjct 231 ------------------LNWGSGNTGTGNAGSGNTGDYNPGSGNFGSGNFGSGNIGSLN 272 Query 140 AGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLN 199 G+ N G N + N G N G GNTG ++NFG N G +N FGN+G GN GF N Sbjct 273 VGSGNFGTLNLANGNNGDVNFGGGNTG-----DFNFGGGNNGTLNFGFGNTGSGNFGFGN 327 Query 200 AGDVNSGVGNAGDVNTGLG--NSGNINTGGFNPGTLNTGFFSAMTQAGPNSGFFNAGTGN 257 G+ N G+G GD G+G NSG N G N G N GFF++ N GFFN+G GN Sbjct 328 TGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNS---GDGNIGFFNSGDGN 384 Query 258 SGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTG 317 +GF GN+G N+GF N+G +NT S GN G+ + G NSG +N NTG Sbjct 385 TGF--------GNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 436 Query 318 IFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFF 349 +G ++GFFN G N+G +GN +GFF Sbjct 437 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFF 468 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 137/308 (45%), Positives = 159/308 (52%), Gaps = 66/308 (21%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N+G N G N+G N G N G GN G+ N G Sbjct 357 FGNSGNNNIGFFNSGDGNIGFFNSGDGNTGFGNAGNI--------------------NTG 396 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 F N G+ N GFG+ GN N+GI DG G NSGS N+GF N+G G NSG GN Sbjct 397 FWNAGNLNTGFGSAGNGNVGI---FDG----GNSNSGSFNVGFQNTGFG-----NSGAGN 444 Query 125 VGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNIN 184 GF N+G +NTGF NAGNVNTGF+NGG NTG N G NTGF A L N Sbjct 445 TGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSA-------LTQAGAN 497 Query 185 SSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQA 244 S FGN G GNSG+ N+ SG GN+G NTG GNSG N G P L Sbjct 498 SGFGNLGTGNSGWGNSDP--SGTGNSGFFNTGNGNSGFSNAG---PAML----------P 542 Query 245 GPNSGFFNAGTGNSGFGHNDPAGSGN--SGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTG 302 G NSGF N G+ N+G A SGN +GI NSG +SG VN+ + NSG N G Sbjct 543 GFNSGFANIGSFNAGI-----ANSGNNLAGISNSGDDSSGAVNSGSQ-----NSGAFNAG 592 Query 303 YGNSGFYN 310 G SGF+ Sbjct 593 VGLSGFFR 600 >gi|339298877|gb|AEJ50987.1| PPE family protein [Mycobacterium tuberculosis CCDC5180] Length=555 Score = 323 bits (828), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 228/344 (67%), Positives = 260/344 (76%), Gaps = 0/344 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGS N GSGNIGS NVGSGN G+ N+ +GN GD NFG GN G+FNFG GN G+ N GFG Sbjct 212 NFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFG 271 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSG+GNIGFGNSG N+G FNSG GN+G Sbjct 272 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIG 331 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 F NSG NTGFGNAGN+NTGFWN G+ NTG +AG GN G FD GN N GS N G N+ Sbjct 332 FFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 391 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSG GN+GF NAGD N+G NAG+VNTG N G+INTGGFN G +NTGF SA+TQAG Sbjct 392 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSALTQAGA 451 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGF N GTGNSG+G++DP+G+GNSG N+G GNSG+ N + G NSG N G N+ Sbjct 452 NSGFGNLGTGNSGWGNSDPSGTGNSGFFNTGNGNSGFSNAGPAMLPGFNSGFANIGSFNA 511 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFK 350 G N+ N GI +G SSG N G+ NSG +G GLSGFF+ Sbjct 512 GIANSGNNLAGISNSGDDSSGAVNSGSQNSGAFNAGVGLSGFFR 555 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 142/332 (43%), Positives = 177/332 (54%), Gaps = 55/332 (16%) Query 20 STNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNTGSGNFGFGNTG 79 + N+G GNIGS N+GSGNIG TN G SGN G N+G GN GS Sbjct 145 TLNLGVGNIGSLNLGSGNIGGTNVG----------SGNVGGTNLGSGNYGS--------- 185 Query 80 NNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGN 139 LN GSGN G GN+G+GN G +N G+GN G GN G+ N G N Sbjct 186 ------------------LNWGSGNTGTGNAGSGNTGDYNPGSGNFGSGNFGSGNIGSLN 227 Query 140 AGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLN 199 G+ N G N + N G N G GNTG ++NFG N G +N FGN+G GN GF N Sbjct 228 VGSGNFGTLNLANGNNGDVNFGGGNTG-----DFNFGGGNNGTLNFGFGNTGSGNFGFGN 282 Query 200 AGDVNSGVGNAGDVNTGLG--NSGNINTGGFNPGTLNTGFFSAMTQAGPNSGFFNAGTGN 257 G+ N G+G GD G+G NSG N G N G N GFF++ N GFFN+G GN Sbjct 283 TGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNS---GDGNIGFFNSGDGN 339 Query 258 SGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTG 317 +GF GN+G N+GF N+G +NT S GN G+ + G NSG +N NTG Sbjct 340 TGF--------GNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 391 Query 318 IFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFF 349 +G ++GFFN G N+G +GN +GFF Sbjct 392 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFF 423 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 137/307 (45%), Positives = 159/307 (52%), Gaps = 66/307 (21%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N+G N G N+G N G N G GN G+ N G Sbjct 312 FGNSGNNNIGFFNSGDGNIGFFNSGDGNTGFGNAGNI--------------------NTG 351 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 F N G+ N GFG+ GN N+GI DG G NSGS N+GF N+G G NSG GN Sbjct 352 FWNAGNLNTGFGSAGNGNVGI---FDG----GNSNSGSFNVGFQNTGFG-----NSGAGN 399 Query 125 VGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNIN 184 GF N+G +NTGF NAGNVNTGF+NGG NTG N G NTGF A L N Sbjct 400 TGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSA-------LTQAGAN 452 Query 185 SSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQA 244 S FGN G GNSG+ N+ SG GN+G NTG GNSG N G P L Sbjct 453 SGFGNLGTGNSGWGNSDP--SGTGNSGFFNTGNGNSGFSNAG---PAML----------P 497 Query 245 GPNSGFFNAGTGNSGFGHNDPAGSGN--SGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTG 302 G NSGF N G+ N+G A SGN +GI NSG +SG VN+ + NSG N G Sbjct 498 GFNSGFANIGSFNAGI-----ANSGNNLAGISNSGDDSSGAVNSGSQ-----NSGAFNAG 547 Query 303 YGNSGFY 309 G SGF+ Sbjct 548 VGLSGFF 554 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 103/246 (42%), Positives = 130/246 (53%), Gaps = 33/246 (13%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G N G GN G+ N G N G+ N G G+ G+ N G + GN N GS N G N G Sbjct 332 FFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 391 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 FGN+G+GN GF N+G N GF N+G N G FN G N Sbjct 392 FGNSGAGNTGF----------------------FNAGDSNTGFANAGNVNTGFFNGGDIN 429 Query 125 VGFGNSGTANTGFGNA---GNVNTGFWNGGSTNTGLAN---AGAGNTGFFDAGNYNFGSL 178 G N G NTGFG+A N+GF N G+ N+G N +G GN+GFF+ GN N G Sbjct 430 TGGFNGGNVNTGFGSALTQAGANSGFGNLGTGNSGWGNSDPSGTGNSGFFNTGNGNSGFS 489 Query 179 NAGN-----INSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTL 233 NAG NS F N G N+G N+G+ +G+ N+GD ++G NSG+ N+G FN G Sbjct 490 NAGPAMLPGFNSGFANIGSFNAGIANSGNNLAGISNSGDDSSGAVNSGSQNSGAFNAGVG 549 Query 234 NTGFFS 239 +GFF Sbjct 550 LSGFFR 555 >gi|306798226|ref|ZP_07436528.1| hypothetical protein TMFG_01319 [Mycobacterium tuberculosis SUMu006] gi|308341494|gb|EFP30345.1| hypothetical protein TMFG_01319 [Mycobacterium tuberculosis SUMu006] Length=521 Score = 323 bits (828), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 228/344 (67%), Positives = 260/344 (76%), Gaps = 0/344 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGS N GSGNIGS NVGSGN G+ N+ +GN GD NFG GN G+FNFG GN G+ N GFG Sbjct 178 NFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFG 237 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSG+GNIGFGNSG N+G FNSG GN+G Sbjct 238 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIG 297 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 F NSG NTGFGNAGN+NTGFWN G+ NTG +AG GN G FD GN N GS N G N+ Sbjct 298 FFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 357 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSG GN+GF NAGD N+G NAG+VNTG N G+INTGGFN G +NTGF SA+TQAG Sbjct 358 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSALTQAGA 417 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGF N GTGNSG+G++DP+G+GNSG N+G GNSG+ N + G NSG N G N+ Sbjct 418 NSGFGNLGTGNSGWGNSDPSGTGNSGFFNTGNGNSGFSNAGPAMLPGFNSGFANIGSFNA 477 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFK 350 G N+ N GI +G SSG N G+ NSG +G GLSGFF+ Sbjct 478 GIANSGNNLAGISNSGDDSSGAVNSGSQNSGAFNAGVGLSGFFR 521 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 142/332 (43%), Positives = 177/332 (54%), Gaps = 55/332 (16%) Query 20 STNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNTGSGNFGFGNTG 79 + N+G GNIGS N+GSGNIG TN G SGN G N+G GN GS Sbjct 111 TLNLGVGNIGSLNLGSGNIGGTNVG----------SGNVGGTNLGSGNYGS--------- 151 Query 80 NNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGN 139 LN GSGN G GN+G+GN G +N G+GN G GN G+ N G N Sbjct 152 ------------------LNWGSGNTGTGNAGSGNTGDYNPGSGNFGSGNFGSGNIGSLN 193 Query 140 AGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLN 199 G+ N G N + N G N G GNTG ++NFG N G +N FGN+G GN GF N Sbjct 194 VGSGNFGTLNLANGNNGDVNFGGGNTG-----DFNFGGGNNGTLNFGFGNTGSGNFGFGN 248 Query 200 AGDVNSGVGNAGDVNTGLG--NSGNINTGGFNPGTLNTGFFSAMTQAGPNSGFFNAGTGN 257 G+ N G+G GD G+G NSG N G N G N GFF++ N GFFN+G GN Sbjct 249 TGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNS---GDGNIGFFNSGDGN 305 Query 258 SGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTG 317 +GF GN+G N+GF N+G +NT S GN G+ + G NSG +N NTG Sbjct 306 TGF--------GNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 357 Query 318 IFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFF 349 +G ++GFFN G N+G +GN +GFF Sbjct 358 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFF 389 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 137/307 (45%), Positives = 159/307 (52%), Gaps = 66/307 (21%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N+G N G N+G N G N G GN G+ N G Sbjct 278 FGNSGNNNIGFFNSGDGNIGFFNSGDGNTGFGNAGNI--------------------NTG 317 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 F N G+ N GFG+ GN N+GI DG G NSGS N+GF N+G G NSG GN Sbjct 318 FWNAGNLNTGFGSAGNGNVGI---FDG----GNSNSGSFNVGFQNTGFG-----NSGAGN 365 Query 125 VGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNIN 184 GF N+G +NTGF NAGNVNTGF+NGG NTG N G NTGF A L N Sbjct 366 TGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSA-------LTQAGAN 418 Query 185 SSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQA 244 S FGN G GNSG+ N+ SG GN+G NTG GNSG N G P L Sbjct 419 SGFGNLGTGNSGWGNSDP--SGTGNSGFFNTGNGNSGFSNAG---PAML----------P 463 Query 245 GPNSGFFNAGTGNSGFGHNDPAGSGN--SGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTG 302 G NSGF N G+ N+G A SGN +GI NSG +SG VN+ + NSG N G Sbjct 464 GFNSGFANIGSFNAGI-----ANSGNNLAGISNSGDDSSGAVNSGSQ-----NSGAFNAG 513 Query 303 YGNSGFY 309 G SGF+ Sbjct 514 VGLSGFF 520 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 103/246 (42%), Positives = 130/246 (53%), Gaps = 33/246 (13%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G N G GN G+ N G N G+ N G G+ G+ N G + GN N GS N G N G Sbjct 298 FFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 357 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 FGN+G+GN GF N+G N GF N+G N G FN G N Sbjct 358 FGNSGAGNTGF----------------------FNAGDSNTGFANAGNVNTGFFNGGDIN 395 Query 125 VGFGNSGTANTGFGNA---GNVNTGFWNGGSTNTGLAN---AGAGNTGFFDAGNYNFGSL 178 G N G NTGFG+A N+GF N G+ N+G N +G GN+GFF+ GN N G Sbjct 396 TGGFNGGNVNTGFGSALTQAGANSGFGNLGTGNSGWGNSDPSGTGNSGFFNTGNGNSGFS 455 Query 179 NAGN-----INSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTL 233 NAG NS F N G N+G N+G+ +G+ N+GD ++G NSG+ N+G FN G Sbjct 456 NAGPAMLPGFNSGFANIGSFNAGIANSGNNLAGISNSGDDSSGAVNSGSQNSGAFNAGVG 515 Query 234 NTGFFS 239 +GFF Sbjct 516 LSGFFR 521 >gi|253798566|ref|YP_003031567.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|313659284|ref|ZP_07816164.1| PPE family protein [Mycobacterium tuberculosis KZN V2475] gi|253320069|gb|ACT24672.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] Length=615 Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 227/344 (66%), Positives = 259/344 (76%), Gaps = 0/344 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGS N GSGNIGS NVGSGN G+ N+ +GN GD NFG GN G+FNFG GN G+ N GFG Sbjct 272 NFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFG 331 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSG+ NIGFGNSG N+G FNSG GN+G Sbjct 332 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGNNNIGFGNSGNNNIGFFNSGDGNIG 391 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 F NSG NTGFGNAGN+NTGFWN G+ NTG +AG GN G FD GN N GS N G N+ Sbjct 392 FFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 451 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSG GN+GF NAGD N+G NAG+VNTG N G+INTGGFN G +NTGF SA+TQAG Sbjct 452 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSALTQAGA 511 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGF N GTGNSG+G++DP+G+GNSG N+G GNSG+ N + G NSG N G N+ Sbjct 512 NSGFGNLGTGNSGWGNSDPSGTGNSGFFNTGNGNSGFSNAGPAMLPGFNSGFANIGSFNA 571 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFK 350 G N+ N GI +G SSG N G+ NSG +G GLSGFF+ Sbjct 572 GIANSGNNLAGISNSGDDSSGAVNSGSQNSGAFNAGVGLSGFFR 615 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 143/332 (44%), Positives = 178/332 (54%), Gaps = 55/332 (16%) Query 20 STNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNTGSGNFGFGNTG 79 + N+G GNIGS N+GSGNIG TN G SGN G N+G GN GS Sbjct 205 TLNLGVGNIGSLNLGSGNIGGTNVG----------SGNVGGTNLGSGNYGS--------- 245 Query 80 NNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGN 139 LN GSGN G GN+G+GN G +N G+GN G GN G+ N G N Sbjct 246 ------------------LNWGSGNTGTGNAGSGNTGDYNPGSGNFGSGNFGSGNIGSLN 287 Query 140 AGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLN 199 G+ N G N + N G N G GNTG ++NFG N G +N FGN+G GN GF N Sbjct 288 VGSGNFGTLNLANGNNGDVNFGGGNTG-----DFNFGGGNNGTLNFGFGNTGSGNFGFGN 342 Query 200 AGDVNSGVGNAGDVNTGLG--NSGNINTGGFNPGTLNTGFFSAMTQAGPNSGFFNAGTGN 257 G+ N G+G GD G+G NSGN N G N G N GFF++ N GFFN+G GN Sbjct 343 TGNNNIGIGLTGDGQIGIGGLNSGNNNIGFGNSGNNNIGFFNS---GDGNIGFFNSGDGN 399 Query 258 SGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTG 317 +GF GN+G N+GF N+G +NT S GN G+ + G NSG +N NTG Sbjct 400 TGF--------GNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 451 Query 318 IFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFF 349 +G ++GFFN G N+G +GN +GFF Sbjct 452 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFF 483 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 137/308 (45%), Positives = 159/308 (52%), Gaps = 66/308 (21%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N+G N G N+G N G N G GN G+ N G Sbjct 372 FGNSGNNNIGFFNSGDGNIGFFNSGDGNTGFGNAGNI--------------------NTG 411 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 F N G+ N GFG+ GN N+GI DG G NSGS N+GF N+G G NSG GN Sbjct 412 FWNAGNLNTGFGSAGNGNVGI---FDG----GNSNSGSFNVGFQNTGFG-----NSGAGN 459 Query 125 VGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNIN 184 GF N+G +NTGF NAGNVNTGF+NGG NTG N G NTGF A L N Sbjct 460 TGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSA-------LTQAGAN 512 Query 185 SSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQA 244 S FGN G GNSG+ N+ SG GN+G NTG GNSG N G P L Sbjct 513 SGFGNLGTGNSGWGNSDP--SGTGNSGFFNTGNGNSGFSNAG---PAML----------P 557 Query 245 GPNSGFFNAGTGNSGFGHNDPAGSGN--SGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTG 302 G NSGF N G+ N+G A SGN +GI NSG +SG VN+ + NSG N G Sbjct 558 GFNSGFANIGSFNAGI-----ANSGNNLAGISNSGDDSSGAVNSGSQ-----NSGAFNAG 607 Query 303 YGNSGFYN 310 G SGF+ Sbjct 608 VGLSGFFR 615 >gi|289750955|ref|ZP_06510333.1| PPE family protein [Mycobacterium tuberculosis T92] gi|289691542|gb|EFD58971.1| PPE family protein [Mycobacterium tuberculosis T92] Length=646 Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 192/290 (67%), Positives = 215/290 (75%), Gaps = 8/290 (2%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGS N GSGNIGS NVGSGN G+ N+ +GN GD NFG GN G+FNFG GN G+ N GFG Sbjct 272 NFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFG 331 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSG+GNIGFGNSG N+G FNSG GN+G Sbjct 332 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIG 391 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 F NSG NTGFGNAGN+NTGFWN G+ NTG +AG GN G FD GN N GS N G N+ Sbjct 392 FFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 451 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSG GN+GF NAGD N+G NAG+VNTG N G+INTGGFN G +NTGF SA+TQAG Sbjct 452 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSALTQAGA 511 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNS 296 NSGF N GTGNSG+ GN +NS V T+ + + N Sbjct 512 NSGFGNLGTGNSGW--------GNKACRNSDRTTCSPVGTARCARYRSND 553 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 142/332 (43%), Positives = 177/332 (54%), Gaps = 55/332 (16%) Query 20 STNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNTGSGNFGFGNTG 79 + N+G GNIGS N+GSGNIG TN G SGN G N+G GN GS Sbjct 205 TLNLGVGNIGSLNLGSGNIGGTNVG----------SGNVGGTNLGSGNYGS--------- 245 Query 80 NNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGN 139 LN GSGN G GN+G+GN G +N G+GN G GN G+ N G N Sbjct 246 ------------------LNWGSGNTGTGNAGSGNTGDYNPGSGNFGSGNFGSGNIGSLN 287 Query 140 AGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLN 199 G+ N G N + N G N G GNTG ++NFG N G +N FGN+G GN GF N Sbjct 288 VGSGNFGTLNLANGNNGDVNFGGGNTG-----DFNFGGGNNGTLNFGFGNTGSGNFGFGN 342 Query 200 AGDVNSGVGNAGDVNTGLG--NSGNINTGGFNPGTLNTGFFSAMTQAGPNSGFFNAGTGN 257 G+ N G+G GD G+G NSG N G N G N GFF++ N GFFN+G GN Sbjct 343 TGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNS---GDGNIGFFNSGDGN 399 Query 258 SGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTG 317 +GF GN+G N+GF N+G +NT S GN G+ + G NSG +N NTG Sbjct 400 TGF--------GNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 451 Query 318 IFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFF 349 +G ++GFFN G N+G +GN +GFF Sbjct 452 FGNSGAGNTGFFNAGDSNTGFANAGNVNTGFF 483 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 94/211 (45%), Positives = 107/211 (51%), Gaps = 39/211 (18%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N+G N G N+G N G N G GN G+ N G Sbjct 372 FGNSGNNNIGFFNSGDGNIGFFNSGDGNTGFGNAGNI--------------------NTG 411 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 F N G+ N GFG+ GN N+GI DG G NSGS N+GF N+G G NSG GN Sbjct 412 FWNAGNLNTGFGSAGNGNVGI---FDG----GNSNSGSFNVGFQNTGFG-----NSGAGN 459 Query 125 VGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNIN 184 GF N+G +NTGF NAGNVNTGF+NGG NTG N G NTGF A L N Sbjct 460 TGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNVNTGFGSA-------LTQAGAN 512 Query 185 SSFGNSGDGNSGFLNAGDVNSGVGNAGDVNT 215 S FGN G GNSG+ N NS V T Sbjct 513 SGFGNLGTGNSGWGNKACRNSDRTTCSPVGT 543 >gi|240173493|ref|ZP_04752151.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=430 Score = 272 bits (695), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 213/344 (62%), Positives = 247/344 (72%), Gaps = 0/344 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGS NLGSGNIGS N+GSGN G+ N+GSGN+ D + G+GN G+FN GSGN G NIGFG Sbjct 87 NFGSGNLGSGNIGSLNLGSGNFGTINIGSGNLADVSLGSGNTGDFNLGSGNLGGGNIGFG 146 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 N G+GN GFGN GN+NIG GLTG+GQIG G LNSGS NIG NSG N+G FNSG N+G Sbjct 147 NLGTGNIGFGNKGNDNIGFGLTGNGQIGFGALNSGSNNIGLFNSGNNNIGFFNSGNNNIG 206 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 + NSG NTGFGNAG+ NTGFWN GS+NTG +AG+ N G FDAGN NFGS N G N+ Sbjct 207 WINSGNGNTGFGNAGDFNTGFWNAGSSNTGFGSAGSANFGIFDAGNGNFGSFNVGTHNTG 266 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSG GN+GF+NAGD N+G NAG+VNTG N GN NTGGFN G LNTGF SA+ Q Sbjct 267 FGNSGAGNTGFMNAGDSNTGAWNAGNVNTGFFNGGNTNTGGFNGGNLNTGFASAVDQPVL 326 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGF N G GNSGFG++DP G+ NSG N+G GNSG N + G NSG N G N+ Sbjct 327 NSGFDNQGAGNSGFGNSDPNGTVNSGFFNTGIGNSGISNAGPALIPGFNSGFSNIGTNNA 386 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFK 350 GF N+ GI +G SSG N G NSG SG+G+SGFF+ Sbjct 387 GFVNSGNTLAGISNSGDDSSGIVNSGDQNSGGFNSGSGISGFFR 430 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 117/290 (41%), Positives = 151/290 (53%), Gaps = 58/290 (20%) Query 95 IGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTN 154 IG N GSGNIG N G+GN+G N G+GN G N G NTG N+G+ N G +N GS N Sbjct 28 IGSFNLGSGNIGGINLGSGNIGDTNLGSGNYGSQNWGGGNTGTANSGSGNIGDFNFGSGN 87 Query 155 TGLANAGAGNTGFFDAGNYNFGSLNAGNINSS---------------------------- 186 G N G+GN G + G+ NFG++N G+ N + Sbjct 88 FGSGNLGSGNIGSLNLGSGNFGTINIGSGNLADVSLGSGNTGDFNLGSGNLGGGNIGFGN 147 Query 187 -------FGNSGDGNSGF------------LNAGDVNSGVGNAGDVNTGLGNSGNINTGG 227 FGN G+ N GF LN+G N G+ N+G+ N G NSGN N G Sbjct 148 LGTGNIGFGNKGNDNIGFGLTGNGQIGFGALNSGSNNIGLFNSGNNNIGFFNSGNNNIGW 207 Query 228 FNPGTLNTGFFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTS 287 N G NTGF +A N+GF+NAG+ N+GFG AGS N GI ++G GN G N Sbjct 208 INSGNGNTGFGNA---GDFNTGFWNAGSSNTGFG---SAGSANFGIFDAGNGNFGSFNVG 261 Query 288 TTSMFGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSG 337 T N+G N+G GN+GF NA +NTG + G +++GFFN G N+G Sbjct 262 TH-----NTGFGNSGAGNTGFMNAGDSNTGAWNAGNVNTGFFNGGNTNTG 306 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 80/186 (44%), Positives = 104/186 (56%), Gaps = 9/186 (4%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F + GS N G + G+ N GS N+G+ N G GN G N G N G+ N G+ N G+ N G Sbjct 237 FGSAGSANFGIFDAGNGNFGSFNVGTHNTGFGNSGAGNTGFMNAGDSNTGAWNAGNVNTG 296 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGL-NSGSGNIGFGNS---GTGNVGLFNS 120 F N G+ N G N GN N G D + G N G+GN GFGNS GT N G FN+ Sbjct 297 FFNGGNTNTGGFNGGNLNTGFASAVDQPVLNSGFDNQGAGNSGFGNSDPNGTVNSGFFNT 356 Query 121 GTGNVGFGNSGTA-----NTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNF 175 G GN G N+G A N+GF N G N GF N G+T G++N+G ++G ++G+ N Sbjct 357 GIGNSGISNAGPALIPGFNSGFSNIGTNNAGFVNSGNTLAGISNSGDDSSGIVNSGDQNS 416 Query 176 GSLNAG 181 G N+G Sbjct 417 GGFNSG 422 Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust. Identities = 94/231 (41%), Positives = 123/231 (54%), Gaps = 33/231 (14%) Query 109 NSGTGNVGLFNSGTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFF 168 N G GN+G FN G+GN+G N G+ N G N G+ N G N G NTG AN+G+GN G F Sbjct 22 NLGFGNIGSFNLGSGNIGGINLGSGNIGDTNLGSGNYGSQNWGGGNTGTANSGSGNIGDF 81 Query 169 DAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGF 228 + G+ NFGS N G+ GN G N G N G +N G GN DV+ G GN+G+ N Sbjct 82 NFGSGNFGSGNLGS-----GNIGSLNLGSGNFGTINIGSGNLADVSLGSGNTGDFNL--- 133 Query 229 NPGTLNTGFFSAMTQAGPNSGFFNAGTGNSGFGH--NDPAGSGNSGIQNSGFGNSGYVNT 286 + G N GF N GTGN GFG+ ND G G +G GFG +N+ Sbjct 134 ----------GSGNLGGGNIGFGNLGTGNIGFGNKGNDNIGFGLTGNGQIGFG---ALNS 180 Query 287 STTSMFGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSG 337 + ++ G+ N+G N GF+N+ NN G ++SG N G GN+G Sbjct 181 GSNNI-----GLFNSGNNNIGFFNSGNNNIGW-----INSGNGNTGFGNAG 221 Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust. Identities = 84/227 (38%), Positives = 109/227 (49%), Gaps = 36/227 (15%) Query 154 NTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNA-----GDVNSGVG 208 N G N G+GN G + G+ N G N G+ N N G GN+G N+ GD N G G Sbjct 27 NIGSFNLGSGNIGGINLGSGNIGDTNLGSGNYGSQNWGGGNTGTANSGSGNIGDFNFGSG 86 Query 209 NAGDVNTGLGNSGNINTGGFNPGTLNTGF--FSAMTQAGPNSGFF--------------- 251 N G N G GN G++N G N GT+N G + ++ N+G F Sbjct 87 NFGSGNLGSGNIGSLNLGSGNFGTINIGSGNLADVSLGSGNTGDFNLGSGNLGGGNIGFG 146 Query 252 NAGTGNSGFGH--NDPAGSG------------NSGIQNSGFGNSGYVNTSTTSMFGGNSG 297 N GTGN GFG+ ND G G NSG N G NSG N + N G Sbjct 147 NLGTGNIGFGNKGNDNIGFGLTGNGQIGFGALNSGSNNIGLFNSGNNNIGFFNSGNNNIG 206 Query 298 VLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNG 344 +N+G GN+GF NA NTG + G ++GF + G+ N G+ +GNG Sbjct 207 WINSGNGNTGFGNAGDFNTGFWNAGSSNTGFGSAGSANFGIFDAGNG 253 >gi|31793532|ref|NP_856025.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|31619125|emb|CAD97237.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=457 Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 181/181 (100%), Positives = 181/181 (100%), Gaps = 0/181 (0%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG Sbjct 273 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 332 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG Sbjct 333 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 392 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS Sbjct 393 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 452 Query 187 F 187 F Sbjct 453 F 453 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 127/299 (43%), Positives = 161/299 (54%), Gaps = 43/299 (14%) Query 13 LGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNTGSGN 72 L S + V + +GST G + NFG GN G+ N GSGNTG N+G GN G+ N Sbjct 181 LDSAQSSAQAVTAQAVGSTVPGP--LQGINFGFGNIGSLNLGSGNTGDTNVGSGNIGNTN 238 Query 73 FGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGT 132 G GN G+ N+G G GD +GIG N G+ N+G GN G+ N+G N G+ NVG GN G+ Sbjct 239 LGGGNIGSFNLGSGNQGDINLGIG--NVGNLNLGSGNFGSQNLGSGNIGSTNVGSGNIGS 296 Query 133 ANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGD 192 N G GN G+ N G N G+ N G N G+ N GF GN+G Sbjct 297 TNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGF--------------------GNTGS 336 Query 193 GNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGPNSGFFN 252 GN GF N G+ N G+G GD G I GG N G+ N GF ++ T N G FN Sbjct 337 GNFGFGNTGNNNIGIGLTGD--------GQIGIGGLNSGSGNIGFGNSGTG---NVGLFN 385 Query 253 AGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNA 311 +GTGN GF GNSG N+GFGN+G VNT + N+G+ N G GN+GF++A Sbjct 386 SGTGNVGF--------GNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDA 436 Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 96/233 (42%), Positives = 120/233 (52%), Gaps = 21/233 (9%) Query 134 NTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDG 193 N GFGN G++N G N G TN G N G N G + G++N GS N G+IN GN G+ Sbjct 208 NFGFGNIGSLNLGSGNTGDTNVGSGNIGNTNLGGGNIGSFNLGSGNQGDINLGIGNVGNL 267 Query 194 NSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP------- 246 N G N G N G GN G N G GN G+ N G N G N G + Sbjct 268 NLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSN 327 Query 247 NSGFFNAGTGNSGFGHND-------PAGSGNSGI--QNSGFGNSGYVNTSTTSMFGGNSG 297 N GF N G+GN GFG+ G G GI NSG GN G+ N+ T GN G Sbjct 328 NIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGT-----GNVG 382 Query 298 VLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFK 350 + N+G GN GF N+ NTG G +++GF+N G+ N+GL +G G +GFF Sbjct 383 LFNSGTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFD 435 >gi|121638235|ref|YP_978459.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990729|ref|YP_002645416.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121493883|emb|CAL72358.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773842|dbj|BAH26648.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341602273|emb|CCC64947.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=468 Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 176/191 (93%), Positives = 178/191 (94%), Gaps = 10/191 (5%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGN----------FNFGSG 56 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIG TN G+GN G+ FNFGSG Sbjct 274 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSG 333 Query 57 NTGSNNIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVG 116 NTGSNNIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVG Sbjct 334 NTGSNNIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVG 393 Query 117 LFNSGTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFG 176 LFNSGTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFG Sbjct 394 LFNSGTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFG 453 Query 177 SLNAGNINSSF 187 SLNAGNINSSF Sbjct 454 SLNAGNINSSF 464 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 121/272 (45%), Positives = 149/272 (55%), Gaps = 43/272 (15%) Query 10 SQNLGS---GNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 +Q +GS G + N G GNIGS N+GSGN GDTN G+GN GN N G GN GS N+G G Sbjct 194 AQAVGSTVPGPLQGINFGFGNIGSLNLGSGNTGDTNVGSGNIGNTNLGGGNIGSFNLGSG 253 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIG---IGGLNSGSGNIGFGNSGTGNVGLFNSGTG 123 N G N G GN GN N+G G G +G IG N GSGNIG N G+GN+G N G+G Sbjct 254 NQGDINLGIGNVGNLNLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGSTNVGSG 313 Query 124 -------------------------NVGFGNSGTANTGFGNAGNVNTGF----------- 147 N+GFGN+G+ N GFGN GN N G Sbjct 314 NIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIG 373 Query 148 -WNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGDVNSG 206 N GS N G N+G GN G F++G N G N+G N+ FGN+G+ N+GF N G N+G Sbjct 374 GLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTG 433 Query 207 VGNAGDVNTGLGNSGNINTGGFNPGTLNTGFF 238 + NAG NTG ++GN N G N G +N+ F Sbjct 434 LANAGAGNTGFFDAGNYNFGSLNAGNINSSFV 465 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 121/271 (45%), Positives = 148/271 (55%), Gaps = 41/271 (15%) Query 51 FNFGSGNTGSNNIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNS 110 NFG GN GS N+G GNTG N G GN GN N+G G N GS N+G GN Sbjct 208 INFGFGNIGSLNLGSGNTGDTNVGSGNIGNTNLG------------GGNIGSFNLGSGNQ 255 Query 111 GTGNVGLFNSGTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDA 170 G N+G+ N G N+G GN G+ N G GN G+ N G N GSTN G N G+ N G + Sbjct 256 GDINLGIGNVGNLNLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGSTNVGSGNI 315 Query 171 GNY----------NFGSLNAGNINSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNS 220 G+ NFGS N G+ N FGN+G GN GF N G+ N G+G GD Sbjct 316 GDTNFGNGNNGNFNFGSGNTGSNNIGFGNTGSGNFGFGNTGNNNIGIGLTGD-------- 367 Query 221 GNINTGGFNPGTLNTGFFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGN 280 G I GG N G+ N GF ++ T N G FN+GTGN GF GNSG N+GFGN Sbjct 368 GQIGIGGLNSGSGNIGFGNSGTG---NVGLFNSGTGNVGF--------GNSGTANTGFGN 416 Query 281 SGYVNTSTTSMFGGNSGVLNTGYGNSGFYNA 311 +G VNT + N+G+ N G GN+GF++A Sbjct 417 AGNVNTGFWNGGSTNTGLANAGAGNTGFFDA 447 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 119/281 (43%), Positives = 144/281 (52%), Gaps = 45/281 (16%) Query 72 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSG 131 NFGFGN G+ N+G G TGD N GSGNIG N G GN+G FN G+G N G Sbjct 209 NFGFGNIGSLNLGSGNTGD-------TNVGSGNIGNTNLGGGNIGSFNLGSG-----NQG 256 Query 132 TANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSG 191 N G GN GN+N G N GS N G N G+ N G + G+ N GS N G+ N GN G Sbjct 257 DINLGIGNVGNLNLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGSTNVGSGNIG 316 Query 192 DGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGPNSGFF 251 D N G N G+ N G GN G N G GN+G+ N GF Sbjct 317 DTNFGNGNNGNFNFGSGNTGSNNIGFGNTGS-----------------------GNFGFG 353 Query 252 NAGTGNSGFGHNDPAGSGNSGI--QNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFY 309 N G N G G G G GI NSG GN G+ N+ T GN G+ N+G GN GF Sbjct 354 NTGNNNIGIGL---TGDGQIGIGGLNSGSGNIGFGNSGT-----GNVGLFNSGTGNVGFG 405 Query 310 NAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFK 350 N+ NTG G +++GF+N G+ N+GL +G G +GFF Sbjct 406 NSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFD 446 >gi|183983646|ref|YP_001851937.1| PPE family protein [Mycobacterium marinum M] gi|183176972|gb|ACC42082.1| PPE family protein [Mycobacterium marinum M] Length=641 Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 207/404 (52%), Positives = 246/404 (61%), Gaps = 60/404 (14%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGN--------------------IGDTNFGNG 46 N G+ NLGSGN+G+TN+GSGN+G+ NVGSGN GD NFG+G Sbjct 238 NVGTFNLGSGNLGNTNLGSGNVGNQNVGSGNYGSGNWGGGNTGTGNTGSGNAGDYNFGSG 297 Query 47 NNGNFNFGSGNTGSNNIGFGNTGSGNF--------------------------------- 73 N G+ N GSGN GS N+G GN G+ N Sbjct 298 NFGSGNLGSGNIGSLNLGSGNFGTLNLFGGNNGDLGLGSGNTGDVNVGSGNNGGGNIGFG 357 Query 74 -------GFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 GFGN G+ NIG GLTGDGQ GIGG NSG+GNIG NSG N+G FNSG N G Sbjct 358 NLGDNNIGFGNKGSGNIGFGLTGDGQFGIGGFNSGTGNIGLFNSGNNNIGFFNSGDNNFG 417 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 + NSG+ NTGFGNAGN NTGFWN GS+NTG +AG GN G F+AGN+N GS N G ++ Sbjct 418 WCNSGSGNTGFGNAGNFNTGFWNAGSSNTGFGSAGDGNFGLFNAGNHNSGSFNVGTESTG 477 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 FGNSG GN+GF+NAG+ N+G N G+VNTG N GN NTG FN G LNT S+++Q+G Sbjct 478 FGNSGAGNTGFMNAGNSNTGAFNGGNVNTGFFNGGNTNTGAFNGGDLNTAIGSSVSQSGL 537 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNS 306 NSGF N G+GNSGF ++DP GS NSG N+G GNSG N + G NSG N G N+ Sbjct 538 NSGFGNLGSGNSGFYNSDPNGSANSGFFNTGIGNSGVSNAGPALVPGYNSGFGNIGTNNA 597 Query 307 GFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFFK 350 GF N+ GI +G SSGF N G NSG SG GLSGFF+ Sbjct 598 GFVNSGNRLAGISNSGDDSSGFLNSGDQNSGGFNSGTGLSGFFR 641 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 110/293 (38%), Positives = 140/293 (48%), Gaps = 72/293 (24%) Query 109 NSGTGNVGLFNSGTGNVGFGNSGTANTGFGNAGNVN--------------------TGFW 148 N G GNVG FN G+GN+G N G+ N G N G+ N G + Sbjct 233 NLGIGNVGTFNLGSGNLGNTNLGSGNVGNQNVGSGNYGSGNWGGGNTGTGNTGSGNAGDY 292 Query 149 NGGSTNTGLANAGAGNTGFFDAGNYNFGSLNA-----GNINSSFGNSGD----------- 192 N GS N G N G+GN G + G+ NFG+LN G++ GN+GD Sbjct 293 NFGSGNFGSGNLGSGNIGSLNLGSGNFGTLNLFGGNNGDLGLGSGNTGDVNVGSGNNGGG 352 Query 193 ---------GNSGFLNAGDVNSGVGNAGDVNTGLG--NSGNINTGGFNPGTLNTGFFSA- 240 N GF N G N G G GD G+G NSG N G FN G N GFF++ Sbjct 353 NIGFGNLGDNNIGFGNKGSGNIGFGLTGDGQFGIGGFNSGTGNIGLFNSGNNNIGFFNSG 412 Query 241 -----MTQAGP-----------NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYV 284 +G N+GF+NAG+ N+GFG AG GN G+ N+G NSG Sbjct 413 DNNFGWCNSGSGNTGFGNAGNFNTGFWNAGSSNTGFGS---AGDGNFGLFNAGNHNSGSF 469 Query 285 NTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSG 337 N T S +G N+G GN+GF NA +NTG F G +++GFFN G N+G Sbjct 470 NVGTES-----TGFGNSGAGNTGFMNAGNSNTGAFNGGNVNTGFFNGGNTNTG 517 >gi|340626148|ref|YP_004744600.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340004338|emb|CCC43481.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=611 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 191/343 (56%), Positives = 229/343 (67%), Gaps = 14/343 (4%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 N G+ NLGSGN G+ N G GNIG N GSGN+G NFG N G+FN G N G+NN+G Sbjct 270 NLGNLNLGSGNDGNGNFGLGNIGDGNRGSGNVGSFNFGTANAGSFNVGFANLGNNNLGIA 329 Query 67 NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVG 126 N G+ N G N GNNNIGIGLTGD IGIG LNSG GN+GFGNSG N+GLFNSG N+G Sbjct 330 NLGNNNLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIG 389 Query 127 FGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSS 186 F NSG +N GF NAG+ NTGF+NGGSTNTG N G+ N G +AG N G+ NAG+ N Sbjct 390 FFNSGDSNYGFANAGSTNTGFFNGGSTNTGYGNGGSINFGIGNAGGANMGNGNAGSFNLG 449 Query 187 FGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGP 246 GNSG N+G N+G++N+G NAGD NTG GNSG+ NTG +N G LNT S TQA Sbjct 450 VGNSGAANTGSSNSGNLNTGFSNAGDTNTGWGNSGDTNTGAYNSGNLNTAVGSVTTQAVA 509 Query 247 NSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYG-N 305 NSGF ++G+GNSGF H +G GNSG+QN+ NSG G+SG+ N+G N Sbjct 510 NSGFGHSGSGNSGFFH---SGDGNSGLQNT---NSGLATI-------GHSGLRNSGDATN 556 Query 306 SGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGF 348 GF N+ NNTGIF G ++G FN G +SG SG+ SGF Sbjct 557 VGFNNSGSNNTGIFNAGTFNTGIFNSGNASSGTNNSGDNSSGF 599 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 99/213 (47%), Positives = 126/213 (60%), Gaps = 15/213 (7%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N GS N G N GSTN G GN GS N G GN G N GNGN G+FN G GN+G+ N G Sbjct 400 FANAGSTNTGFFNGGSTNTGYGNGGSINFGIGNAGGANMGNGNAGSFNLGVGNSGAANTG 459 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGI---GGLNSGSGNI--------GFGNSGTG 113 N+G+ N GF N G+ N G G +GD G G LN+ G++ GFG+SG+G Sbjct 460 SSNSGNLNTGFSNAGDTNTGWGNSGDTNTGAYNSGNLNTAVGSVTTQAVANSGFGHSGSG 519 Query 114 NVGLFNSGTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNY 173 N G F+SG GN G N+ + G++G N+ G +TN G N+G+ NTG F+AG + Sbjct 520 NSGFFHSGDGNSGLQNTNSGLATIGHSGLRNS----GDATNVGFNNSGSNNTGIFNAGTF 575 Query 174 NFGSLNAGNINSSFGNSGDGNSGFLNAGDVNSG 206 N G N+GN +S NSGD +SGF N+ D SG Sbjct 576 NTGIFNSGNASSGTNNSGDNSSGFSNSSDNQSG 608 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 145/324 (45%), Positives = 176/324 (55%), Gaps = 50/324 (15%) Query 16 GNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNTGSGNFGF 75 GNIG N+G+GN GS N+GSGNIG+ N G GN GN N GSGN G N+G GN G+ NFG Sbjct 209 GNIGDYNLGNGNTGSDNLGSGNIGNANNGGGNTGNANIGSGNNGFFNLGDGNLGNTNFGS 268 Query 76 GNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANT 135 GN GN N+G G G+G G+G NIG GN G+GNVG FN GT N +G+ N Sbjct 269 GNLGNLNLGSGNDGNGNFGLG-------NIGDGNRGSGNVGSFNFGTAN-----AGSFNV 316 Query 136 GFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGN--YNFGSLNAGNINSSFGNSGDG 193 GF N GN N G N G+ N G+AN G N G G+ G+LN+G N FGNSG+ Sbjct 317 GFANLGNNNLGIANLGNNNLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNN 376 Query 194 NSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGPNSGFFNA 253 N G N+G+ N G N+GD N G N+G+ NTG FN G+ NTG+ Sbjct 377 NIGLFNSGNNNIGFFNSGDSNYGFANAGSTNTGFFNGGSTNTGY---------------- 420 Query 254 GTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAV 313 GN G N G GN+G N M GN+G N G GNSG N Sbjct 421 ---------------GNGGSINFGIGNAGGAN-----MGNGNAGSFNLGVGNSGAANTGS 460 Query 314 NNTGIFVTGVMSSGFFNFGTGNSG 337 +N+G TG ++G N G GNSG Sbjct 461 SNSGNLNTGFSNAGDTNTGWGNSG 484 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 114/274 (42%), Positives = 148/274 (55%), Gaps = 34/274 (12%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N+G N G+ N+G N G +N G N G TN G N G+ N G GN GS N G Sbjct 370 FGNSGNNNIGLFNSGNNNIGFFNSGDSNYGFANAGSTNTGFFNGGSTNTGYGNGGSINFG 429 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 GN G N G GN G+ N+G+G NSG+ N G NSG N G N+G N Sbjct 430 IGNAGGANMGNGNAGSFNLGVG------------NSGAANTGSSNSGNLNTGFSNAGDTN 477 Query 125 VGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNIN 184 G+GNSG NTG N+GN+NT G T +AN+G G++G ++G ++ G N+G N Sbjct 478 TGWGNSGDTNTGAYNSGNLNTAV--GSVTTQAVANSGFGHSGSGNSGFFHSGDGNSGLQN 535 Query 185 SSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQA 244 ++ G + G+SG N+GD N G NSG+ NTG FN GT NTG F Sbjct 536 TNSGLATIGHSGLRNSGDA---------TNVGFNNSGSNNTGIFNAGTFNTGIF------ 580 Query 245 GPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGF 278 NSG ++GT NSG ++ +G NS SGF Sbjct 581 --NSGNASSGTNNSG---DNSSGFSNSSDNQSGF 609 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 137/344 (40%), Positives = 175/344 (51%), Gaps = 63/344 (18%) Query 63 IGFGNTGSGN-FGFGNTGNNNIGIGLTGDGQIG---IGGLNSGSGNIGFGNSGTGNVGLF 118 +G GNTG GN F GN G+ N+G G TG +G IG N+G GN G N G+GN G F Sbjct 195 LGIGNTGIGNIFSIGNIGDYNLGNGNTGSDNLGSGNIGNANNGGGNTGNANIGSGNNGFF 254 Query 119 NSGTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSL 178 N G GN+G N G GN GN+N G N G+ N GL N G GN G + G++NFG+ Sbjct 255 NLGDGNLG-----NTNFGSGNLGNLNLGSGNDGNGNFGLGNIGDGNRGSGNVGSFNFGTA 309 Query 179 NAGNINSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGL--------------------- 217 NAG+ N F N G+ N G N G+ N G+ N G+ N G+ Sbjct 310 NAGSFNVGFANLGNNNLGIANLGNNNLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLG 369 Query 218 -GNSGNINTGGFNPGTLNTGFFSA------MTQAGP-NSGFFNAGTGNSGFGH------- 262 GNSGN N G FN G N GFF++ AG N+GFFN G+ N+G+G+ Sbjct 370 FGNSGNNNIGLFNSGNNNIGFFNSGDSNYGFANAGSTNTGFFNGGSTNTGYGNGGSINFG 429 Query 263 ----------NDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAA 312 N AGS N G+ NSG N+G N+ + N+G NTG+GNSG N Sbjct 430 IGNAGGANMGNGNAGSFNLGVGNSGAANTGSSNSGNLNTGFSNAGDTNTGWGNSGDTNTG 489 Query 313 VNNTG--------IFVTGVMSSGFFNFGTGNSGLLVSGNGLSGF 348 N+G + V +SGF + G+GNSG SG+G SG Sbjct 490 AYNSGNLNTAVGSVTTQAVANSGFGHSGSGNSGFFHSGDGNSGL 533 >gi|183984290|ref|YP_001852581.1| PPE family protein [Mycobacterium marinum M] gi|183177616|gb|ACC42726.1| PPE family protein [Mycobacterium marinum M] Length=1106 Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 192/373 (52%), Positives = 235/373 (64%), Gaps = 50/373 (13%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFG----------NGNNGNFNFGSG 56 N G+ NLGSGN GSTN GSGNIG+ N+GSGN GD N G +GN+G NFGSG Sbjct 730 NAGNTNLGSGNTGSTNFGSGNIGALNLGSGNHGDANLGFGNFGNGNIGSGNHGAGNFGSG 789 Query 57 NTGSNNIGFGNTGSGNFGFGNTGNNNIGIG--------------------LTGDGQIGIG 96 NTGS N+G GN GS NFG GN GN+N+G+G LTGD +GIG Sbjct 790 NTGSRNLGSGNAGSTNFGSGNHGNSNVGLGNFGNNNLGLGNNGSNNIGFGLTGDNLVGIG 849 Query 97 GLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTG 156 LNSG+GN+GFGN+G N+GLFNSG NVGF NSG N G N+G+ NTG WN GSTNTG Sbjct 850 ALNSGAGNLGFGNTGDNNIGLFNSGDNNVGFFNSGDGNFGLANSGDTNTGLWNAGSTNTG 909 Query 157 LANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTG 216 NAG+ + GF +AG+ N G NAG N GNSG N+G N+G +N+G N GD NTG Sbjct 910 FGNAGSADFGFGNAGDRNMGFGNAGAANMGAGNSGSYNTGSFNSGTLNTGDFNGGDHNTG 969 Query 217 LGNSGNINTGGFNPGTLNTGFFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNS 276 GNSGN NTGG N G LNTGF S+ QA NSGF N G+GNSGF N+ Sbjct 970 WGNSGNTNTGGINSGDLNTGFGSSADQAVTNSGFGNNGSGNSGF-------------NNT 1016 Query 277 GFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNS 336 G NSG+ N +T+++F G+SG+LN G G + +NNTG F TG+ ++GF G NS Sbjct 1017 GDTNSGFHNANTSALFSGHSGLLNAG----GSQSVGINNTGSFNTGLFNTGFRTAGIANS 1072 Query 337 ---GLLVSGNGLS 346 GLL + +G++ Sbjct 1073 ATNGLLTATSGVA 1085 Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 194/362 (54%), Positives = 231/362 (64%), Gaps = 24/362 (6%) Query 9 GSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNT 68 G N G GN GS+N+G GN GS N GSGN G TNFG+GN G+ N GSGN G +N+GFGN Sbjct 297 GDANFGWGNAGSSNLGLGNFGSLNWGSGNNGSTNFGSGNTGSLNLGSGNAGDSNVGFGNF 356 Query 69 GSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFG 128 GS N GFGN GNNNIGIGL GD IGIG LNSG+GN+GFGNSGT N+G FNSG N+GF Sbjct 357 GSNNVGFGNNGNNNIGIGLNGDDLIGIGALNSGAGNLGFGNSGTNNIGFFNSGDNNIGFF 416 Query 129 NSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFG 188 NSG+ N GF NAG++NTGFWNG TNTG N+G N GF ++G N G+ N G+ N G Sbjct 417 NSGSGNFGFENAGDINTGFWNGRDTNTGFGNSGLSNFGFGNSGVNNVGAGNGGSSNVGLG 476 Query 189 NSGDGNSGFLNAGDVNSGVGNAGDV----------NTGLGNSGNINTGGFNPGTLNTGFF 238 N+G N+G N+G+ N+G N+G + NTGLGNSG NTG FN G LNTG Sbjct 477 NAGLLNTGSFNSGNFNTGDFNSGSMNTGYFNSSGHNTGLGNSGFTNTGFFNSGDLNTGMG 536 Query 239 SAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFG-GNSG 297 S Q+ NSGF NAG+GNSGF + GS +SG NS NSG++N T G NSG Sbjct 537 SPEDQSVANSGFRNAGSGNSGF---NNTGSFSSGFFNSTNSNSGFLNAGGTVNSGINNSG 593 Query 298 VLNTGYGNSGFYNAAVNNTGIFVTGV----------MSSGFFNFGTGNSGLLVSGNGLSG 347 N G GN G N + N G F TG +SG FN G G+SG+ +G+ SG Sbjct 594 NTNAGIGNLGDDNFGLFNNGTFNTGAGNSSGGAVFPYTSGLFNSGNGSSGVFNAGDEQSG 653 Query 348 FF 349 FF Sbjct 654 FF 655 Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 185/423 (44%), Positives = 228/423 (54%), Gaps = 80/423 (18%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTG------- 59 N G NLGSGN GS N+GSGNIG ++GSGN G+ N G+GN G FN GSGNTG Sbjct 223 NIGDYNLGSGNTGSFNLGSGNIGDASLGSGNAGNANLGSGNQGFFNLGSGNTGNINFGSG 282 Query 60 ----SNNIGFGN-TGSGNFGFGNTGNNNIGIGLTGDGQIG-------------IGGLNSG 101 S N GFGN G NFG+GN G++N+G+G G G G LN G Sbjct 283 NRLGSLNFGFGNAVGDANFGWGNAGSSNLGLGNFGSLNWGSGNNGSTNFGSGNTGSLNLG 342 Query 102 SGNIGFGNSGTGN---------------------------VGLFNSGTGNVGFGNSGTAN 134 SGN G N G GN +G NSG GN+GFGNSGT N Sbjct 343 SGNAGDSNVGFGNFGSNNVGFGNNGNNNIGIGLNGDDLIGIGALNSGAGNLGFGNSGTNN 402 Query 135 TGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGN 194 GF N+G+ N GF+N GS N G NAG NTGF++ + N G N+G N FGNSG N Sbjct 403 IGFFNSGDNNIGFFNSGSGNFGFENAGDINTGFWNGRDTNTGFGNSGLSNFGFGNSGVNN 462 Query 195 SGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSA------MTQAG-PN 247 G N G N G+GNAG +NTG NSGN NTG FN G++NTG+F++ + +G N Sbjct 463 VGAGNGGSSNVGLGNAGLLNTGSFNSGNFNTGDFNSGSMNTGYFNSSGHNTGLGNSGFTN 522 Query 248 SGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVN-----------TSTTSMFGGNS 296 +GFFN+G N+G G + NSG +N+G GNSG+ N T++ S F Sbjct 523 TGFFNSGDLNTGMGSPEDQSVANSGFRNAGSGNSGFNNTGSFSSGFFNSTNSNSGFLNAG 582 Query 297 GVLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGN----------SGLLVSGNGLS 346 G +N+G NSG NA + N G G+ ++G FN G GN SGL SGNG S Sbjct 583 GTVNSGINNSGNTNAGIGNLGDDNFGLFNNGTFNTGAGNSSGGAVFPYTSGLFNSGNGSS 642 Query 347 GFF 349 G F Sbjct 643 GVF 645 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 154/321 (48%), Positives = 209/321 (66%), Gaps = 16/321 (4%) Query 6 RNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGF 65 RN GS N GSTN GSGN G++NVG GN G+ N G GNNG+ N G G TG N +G Sbjct 794 RNLGSGN-----AGSTNFGSGNHGNSNVGLGNFGNNNLGLGNNGSNNIGFGLTGDNLVGI 848 Query 66 G--NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTG 123 G N+G+GN GFGNTG+NNIG+ +GD +G NSG GN G NSG N GL+N+G+ Sbjct 849 GALNSGAGNLGFGNTGDNNIGLFNSGDNNVGF--FNSGDGNFGLANSGDTNTGLWNAGST 906 Query 124 NVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNI 183 N GFGN+G+A+ GFGNAG+ N GF N G+ N G N+G+ NTG F++G N G N G+ Sbjct 907 NTGFGNAGSADFGFGNAGDRNMGFGNAGAANMGAGNSGSYNTGSFNSGTLNTGDFNGGDH 966 Query 184 NSSFGNSGDGNSGFLNAGDVNSGVGNAGD---VNTGLGNSGNINTGGFNPGTLNTGFFSA 240 N+ +GNSG+ N+G +N+GD+N+G G++ D N+G GN+G+ N+G N G N+GF +A Sbjct 967 NTGWGNSGNTNTGGINSGDLNTGFGSSADQAVTNSGFGNNGSGNSGFNNTGDTNSGFHNA 1026 Query 241 MTQA--GPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGV 298 T A +SG NAG G+ G N+ GS N+G+ N+GF +G N++T + SGV Sbjct 1027 NTSALFSGHSGLLNAG-GSQSVGINN-TGSFNTGLFNTGFRTAGIANSATNGLLTATSGV 1084 Query 299 LNTGYGNSGFYNAAVNNTGIF 319 N+G +SG +NA + +G F Sbjct 1085 ANSGNNSSGGFNANPDQSGFF 1105 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 166/392 (43%), Positives = 196/392 (50%), Gaps = 96/392 (24%) Query 26 GNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNT----------------- 68 GNIG N+ GNIGD N G+GN G+FN GSGN G ++G GN Sbjct 212 GNIGFANLSVGNIGDYNLGSGNTGSFNLGSGNIGDASLGSGNAGNANLGSGNQGFFNLGS 271 Query 69 --------------GSGNFGFGN-TGNNNIGIGLTGDGQIGI---GGLNSGSGNIGFGNS 110 GS NFGFGN G+ N G G G +G+ G LN GSGN G N Sbjct 272 GNTGNINFGSGNRLGSLNFGFGNAVGDANFGWGNAGSSNLGLGNFGSLNWGSGNNGSTNF 331 Query 111 GTGNVGLFNSGTG-----NVGFG--------------------------------NSGTA 133 G+GN G N G+G NVGFG NSG Sbjct 332 GSGNTGSLNLGSGNAGDSNVGFGNFGSNNVGFGNNGNNNIGIGLNGDDLIGIGALNSGAG 391 Query 134 NTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDG 193 N GFGN+G N GF+N G N G N+G+GN GF +AG+ N G N + N+ FGNSG Sbjct 392 NLGFGNSGTNNIGFFNSGDNNIGFFNSGSGNFGFENAGDINTGFWNGRDTNTGFGNSGLS 451 Query 194 NSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGPNSGFFNA 253 N GF N+G N G GN G N GLGN+G +NTG FN G NTG F++ + N+G+FN+ Sbjct 452 NFGFGNSGVNNVGAGNGGSSNVGLGNAGLLNTGSFNSGNFNTGDFNSGSM---NTGYFNS 508 Query 254 GTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNT---STTSMFGGNSGVLNTGYGNSGFYN 310 GHN G GNSG N+GF NSG +NT S NSG N G GNSGF Sbjct 509 S------GHN--TGLGNSGFTNTGFFNSGDLNTGMGSPEDQSVANSGFRNAGSGNSGF-- 558 Query 311 AAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSG 342 NNTG F SSGFFN NSG L +G Sbjct 559 ---NNTGSF-----SSGFFNSTNSNSGFLNAG 582 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 175/420 (42%), Positives = 213/420 (51%), Gaps = 91/420 (21%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTN--FGN------------------- 45 NFGS N GSGN GSTN GSGN GS N+GSGN GD+N FGN Sbjct 315 NFGSLNWGSGNNGSTNFGSGNTGSLNLGSGNAGDSNVGFGNFGSNNVGFGNNGNNNIGIG 374 Query 46 ---------------------GNNGNFNFGSGNTGSNNIGFGNTGSGNFGFGNTGNNNIG 84 GN+G N G N+G NNIGF N+GSGNFGF N G+ N G Sbjct 375 LNGDDLIGIGALNSGAGNLGFGNSGTNNIGFFNSGDNNIGFFNSGSGNFGFENAGDINTG 434 Query 85 IGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGNAGNVN 144 D G G NSG N GFGNSG NVG N G+ NVG GN+G NTG N+GN N Sbjct 435 FWNGRDTNTGFG--NSGLSNFGFGNSGVNNVGAGNGGSSNVGLGNAGLLNTGSFNSGNFN 492 Query 145 TGFWNGGST----------NTGLANAGAGNTGFFDAGNYNFGS-------------LNAG 181 TG +N GS NTGL N+G NTGFF++G+ N G NAG Sbjct 493 TGDFNSGSMNTGYFNSSGHNTGLGNSGFTNTGFFNSGDLNTGMGSPEDQSVANSGFRNAG 552 Query 182 NINSSFGNSG----------DGNSGFLNA-GDVNSGVGNAGDVNTGLGNSGNINTGGFNP 230 + NS F N+G + NSGFLNA G VNSG+ N+G+ N G+GN G+ N G FN Sbjct 553 SGNSGFNNTGSFSSGFFNSTNSNSGFLNAGGTVNSGINNSGNTNAGIGNLGDDNFGLFNN 612 Query 231 GTLNTG-----------FFSAMTQAGP-NSGFFNAGTGNSG-FGHNDPAGSGNSGIQNSG 277 GT NTG + S + +G +SG FNAG SG FG + +G G+ + Sbjct 613 GTFNTGAGNSSGGAVFPYTSGLFNSGNGSSGVFNAGDEQSGFFGTSGLVLTGTDGLAAAT 672 Query 278 FGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSG 337 ++ ++ GN+GV N G GN G YN NTG G + G N G+GN+G Sbjct 673 TSGLPALDLPAPNLGIGNAGVGNLGLGNIGDYNLGSGNTGDANFGFGNIGQANLGSGNAG 732 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 146/392 (38%), Positives = 179/392 (46%), Gaps = 73/392 (18%) Query 19 GSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNI-----GFGNTGSGNF 73 G+ N G N G+TN G GN+GD NFG NNG FN G+GN+ + G N+G+G+ Sbjct 583 GTVNSGINNSGNTNAGIGNLGDDNFGLFNNGTFNTGAGNSSGGAVFPYTSGLFNSGNGSS 642 Query 74 GFGNTGNNNIGI------------GLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSG 121 G N G+ G GL G+ L+ + N+G GN+G GN+GL N G Sbjct 643 GVFNAGDEQSGFFGTSGLVLTGTDGLAAATTSGLPALDLPAPNLGIGNAGVGNLGLGNIG 702 Query 122 TGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAG 181 N+G GN+G AN GFGN G N G N G+TN G N G+ N G + G N GS N G Sbjct 703 DYNLGSGNTGDANFGFGNIGQANLGSGNAGNTNLGSGNTGSTNFGSGNIGALNLGSGNHG 762 Query 182 NINSSF----------GNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINT------ 225 + N F GN G GN G N G N G GNAG N G GN GN N Sbjct 763 DANLGFGNFGNGNIGSGNHGAGNFGSGNTGSRNLGSGNAGSTNFGSGNHGNSNVGLGNFG 822 Query 226 --------------------------GGFNPGTLNTGF-------FSAMTQAGPNSGFFN 252 G N G N GF N GFFN Sbjct 823 NNNLGLGNNGSNNIGFGLTGDNLVGIGALNSGAGNLGFGNTGDNNIGLFNSGDNNVGFFN 882 Query 253 AGTGNSGFGHNDPAGSG--NSGIQNSGFGNSGYV-----NTSTTSMFGGNSGVLNTGYGN 305 +G GN G ++ +G N+G N+GFGN+G N +M GN+G N G GN Sbjct 883 SGDGNFGLANSGDTNTGLWNAGSTNTGFGNAGSADFGFGNAGDRNMGFGNAGAANMGAGN 942 Query 306 SGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSG 337 SG YN N+G TG + G N G GNSG Sbjct 943 SGSYNTGSFNSGTLNTGDFNGGDHNTGWGNSG 974 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 136/334 (41%), Positives = 166/334 (50%), Gaps = 38/334 (11%) Query 6 RNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGF 65 N G N G N GS N SGN N GD N G+ N G FN NTG N GF Sbjct 471 SNVGLGNAGLLNTGSFN--SGNF--------NTGDFNSGSMNTGYFNSSGHNTGLGNSGF 520 Query 66 GNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNV 125 NT GF N+G+ N G+G D + N GF N+G+GN G N+G+ + Sbjct 521 TNT-----GFFNSGDLNTGMGSPEDQSV---------ANSGFRNAGSGNSGFNNTGSFSS 566 Query 126 GFGNSGTANTGFGNA-GNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNIN 184 GF NS +N+GF NA G VN+G N G+TN G+ N G N G F+ G +N G AG N Sbjct 567 GFFNSTNSNSGFLNAGGTVNSGINNSGNTNAGIGNLGDDNFGLFNNGTFNTG---AG--N 621 Query 185 SSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTG-LGNSGNINTGGFNPGTLNTGFFSAMTQ 243 SS G SG N+G+ +SGV NAGD +G G SG + TG T A+ Sbjct 622 SSGGAVFPYTSGLFNSGNGSSGVFNAGDEQSGFFGTSGLVLTGTDGLAAATTSGLPALDL 681 Query 244 AGPNSGFFNAGTGNSGFGH--NDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNT 301 PN G NAG GN G G+ + GSGN+G N GFGN G N + GN+G N Sbjct 682 PAPNLGIGNAGVGNLGLGNIGDYNLGSGNTGDANFGFGNIGQANLGS-----GNAGNTNL 736 Query 302 GYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGN 335 G GN+G N N G G + G N G GN Sbjct 737 GSGNTGSTNFGSGNIGALNLGSGNHGDANLGFGN 770 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 71/177 (41%), Positives = 91/177 (52%), Gaps = 22/177 (12%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFG---------- 54 F N G+ N+G+GN GS N GS N G+ N G N GD N G GN+GN N G Sbjct 930 FGNAGAANMGAGNSGSYNTGSFNSGTLNTGDFNGGDHNTGWGNSGNTNTGGINSGDLNTG 989 Query 55 ---SGNTGSNNIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQI---GIGGLNS-GSGNIGF 107 S + N GFGN GSGN GF NTG+ N G + G LN+ GS ++G Sbjct 990 FGSSADQAVTNSGFGNNGSGNSGFNNTGDTNSGFHNANTSALFSGHSGLLNAGGSQSVGI 1049 Query 108 GNSGTGNVGLFNSGTGNVGFGNSG-----TANTGFGNAGNVNTGFWNGGSTNTGLAN 159 N+G+ N GLFN+G G NS TA +G N+GN ++G +N +G N Sbjct 1050 NNTGSFNTGLFNTGFRTAGIANSATNGLLTATSGVANSGNNSSGGFNANPDQSGFFN 1106 Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust. Identities = 86/238 (37%), Positives = 111/238 (47%), Gaps = 56/238 (23%) Query 154 NTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGDVNSGVGNAGDV 213 N G AN GN G +YN GS N G+ N GN GD + G NAG+ N G GN G Sbjct 213 NIGFANLSVGNIG-----DYNLGSGNTGSFNLGSGNIGDASLGSGNAGNANLGSGNQGFF 267 Query 214 NTGLGNSGNINTGGFN------PGTLNTGFFSAMTQAGPNSGFFNAGTGNSGFGH--NDP 265 N G GN TG N G+LN GF +A+ A N G+ NAG+ N G G+ + Sbjct 268 NLGSGN-----TGNINFGSGNRLGSLNFGFGNAVGDA--NFGWGNAGSSNLGLGNFGSLN 320 Query 266 AGSGNSGIQNSGFGNSGYVNTST----------------------------------TSM 291 GSGN+G N G GN+G +N + + Sbjct 321 WGSGNNGSTNFGSGNTGSLNLGSGNAGDSNVGFGNFGSNNVGFGNNGNNNIGIGLNGDDL 380 Query 292 FGGNSGVLNTGYGNSGFYNAAVNNTGIFVTGVMSSGFFNFGTGNSGLLVSGNGLSGFF 349 G G LN+G GN GF N+ NN G F +G + GFFN G+GN G +G+ +GF+ Sbjct 381 IG--IGALNSGAGNLGFGNSGTNNIGFFNSGDNNIGFFNSGSGNFGFENAGDINTGFW 436 >gi|298524632|ref|ZP_07012041.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A] gi|298494426|gb|EFI29720.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A] Length=554 Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 197/374 (53%), Positives = 231/374 (62%), Gaps = 46/374 (12%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 N G+ NLGSGN G+ N G GNIG N GSGN+G NFG N G+FN GS N GS N+GF Sbjct 196 NLGNLNLGSGNDGNGNFGLGNIGDGNRGSGNVGSFNFGTANAGSFNVGSANHGSPNVGFA 255 Query 67 NTGSGNFGFGNTGNNN----------IGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVG 116 N G+ N G N GNNN IGIGLTGD IGIG LNSG GN+GFGNSG N+G Sbjct 256 NLGNNNLGIANLGNNNLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIG 315 Query 117 LFNSGTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFG 176 LFNSG N+GF NSG +N GF N+G+ NTGF N G TNTG NAG+GN GF +AGN NFG Sbjct 316 LFNSGNNNIGFFNSGDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFG 375 Query 177 SLNAGNINSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTG 236 N+G N GNSG N+G N+G +N+G N+GD NTG NSG+INTGGF+ G LNTG Sbjct 376 FGNSGFENMGVGNSGAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTG 435 Query 237 FFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNS 296 F S + Q NSGF N GTGNSGF NSG NSG+ NT+T + F G+S Sbjct 436 FGSPVDQPVMNSGFGNIGTGNSGF-------------NNSGDANSGFQNTNTGAFFIGHS 482 Query 297 GVLNTGYG------------NSGFYNAAVNNTGI--------FVTGVMSSGFFNFGTGNS 336 G+LN+G G N+G +N NNTGI F T +SG N G +S Sbjct 483 GLLNSGGGQHVGISNSGTGFNTGLFNTGFNNTGIGNSATNAAFTT---TSGVANSGDNSS 539 Query 337 GLLVSGNGLSGFFK 350 G +GN SGFF Sbjct 540 GGFNAGNDQSGFFD 553 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 174/364 (48%), Positives = 200/364 (55%), Gaps = 40/364 (10%) Query 9 GSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNT 68 G L +G N G GNI S GNIGD N GNGN GN N GSGNTG N+G GNT Sbjct 122 GPAALAIPALGIGNTGIGNIFSI----GNIGDYNLGNGNTGNANLGSGNTGQANLGSGNT 177 Query 69 GSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFG 128 G NFG GNT N N G G N G+ N+G GN G GN GL N G GN G G Sbjct 178 GFFNFGSGNTANTNFGSG------------NLGNLNLGSGNDGNGNFGLGNIGDGNRGSG 225 Query 129 NSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFG 188 N G+ N G NAG+ N G N GS N G AN G N G + GN N G N GN N G Sbjct 226 NVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGNNNLGIANLGNNNIGIG 285 Query 189 NSGDGNSGF--LNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFF-SAMTQAG 245 +GD G LN+G N G GN+G+ N GL NSGN N G FN G N GFF S T G Sbjct 286 LTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNSGDSNFGFFNSGDTNTG 345 Query 246 ------PNSGFFNAGTGNSGFGH--NDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSG 297 N+GF NAG+GN GFG+ N+ G GNSG +N G GNSG NT + + N+G Sbjct 346 FGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNSGAYNTGSFNSGTLNTG 405 Query 298 VLNTGYGNSGFYNAAVNNTGIFVTG-------------VMSSGFFNFGTGNSGLLVSGNG 344 LN+G N+G+ N+ NTG F +G VM+SGF N GTGNSG SG+ Sbjct 406 DLNSGDFNTGWANSGDINTGGFHSGDLNTGFGSPVDQPVMNSGFGNIGTGNSGFNNSGDA 465 Query 345 LSGF 348 SGF Sbjct 466 NSGF 469 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 128/319 (41%), Positives = 165/319 (52%), Gaps = 76/319 (23%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N+G N G+ N+G N G +N G N GDTN G GN G N G GN GS N G Sbjct 306 FGNSGNNNIGLFNSGNNNIGFFNSGDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFG 365 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 FGN G+ NFGFGN+G N+G+ GNSG N G FNSGT N Sbjct 366 FGNAGNNNFGFGNSGFENMGV----------------------GNSGAYNTGSFNSGTLN 403 Query 125 VGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGS-LNAGNI 183 G NSG NTG+ N+G++NTG ++ G NTG FGS ++ + Sbjct 404 TGDLNSGDFNTGWANSGDINTGGFHSGDLNTG------------------FGSPVDQPVM 445 Query 184 NSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTG---LGNSGNINTGGFNPGTLNTGFFSA 240 NS FGN G GNSGF N+GD NSG N NTG +G+SG +N+GG Sbjct 446 NSGFGNIGTGNSGFNNSGDANSGFQN---TNTGAFFIGHSGLLNSGG------------- 489 Query 241 MTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLN 300 G + G N+GTG N+G+ N+GF N+G N++T + F SGV N Sbjct 490 ----GQHVGISNSGTG------------FNTGLFNTGFNNTGIGNSATNAAFTTTSGVAN 533 Query 301 TGYGNSGFYNAAVNNTGIF 319 +G +SG +NA + +G F Sbjct 534 SGDNSSGGFNAGNDQSGFF 552 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 79/183 (44%), Positives = 97/183 (54%), Gaps = 23/183 (12%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G +N+G GN G+ N GS N G+ N G N GD N G N+G+ N G ++G N G Sbjct 376 FGNSGFENMGVGNSGAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTG 435 Query 65 FG-------------NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGG---LNSGSG-NIGF 107 FG N G+GN GF N+G+ N G T G IG LNSG G ++G Sbjct 436 FGSPVDQPVMNSGFGNIGTGNSGFNNSGDANSGFQNTNTGAFFIGHSGLLNSGGGQHVGI 495 Query 108 GNSGTG-NVGLFNSGTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTG 166 NSGTG N GLFN+G N G GNS T N F +G N G ++G NAG +G Sbjct 496 SNSGTGFNTGLFNTGFNNTGIGNSAT-NAAF----TTTSGVANSGDNSSGGFNAGNDQSG 550 Query 167 FFD 169 FFD Sbjct 551 FFD 553 >gi|289569131|ref|ZP_06449358.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289542885|gb|EFD46533.1| PPE family protein [Mycobacterium tuberculosis T17] Length=618 Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 197/374 (53%), Positives = 231/374 (62%), Gaps = 46/374 (12%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 N G+ NLGSGN G+ N G GNIG N GSGN+G NFG N G+FN GS N GS N+GF Sbjct 260 NLGNLNLGSGNDGNGNFGLGNIGDGNRGSGNVGSFNFGTANAGSFNVGSANHGSPNVGFA 319 Query 67 NTGSGNFGFGNTGNNN----------IGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVG 116 N G+ N G N GNNN IGIGLTGD IGIG LNSG GN+GFGNSG N+G Sbjct 320 NLGNNNLGIANLGNNNLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIG 379 Query 117 LFNSGTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFG 176 LFNSG N+GF NSG +N GF N+G+ NTGF N G TNTG NAG+GN GF +AGN NFG Sbjct 380 LFNSGNNNIGFFNSGDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFG 439 Query 177 SLNAGNINSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTG 236 N+G N GNSG N+G N+G +N+G N+GD NTG NSG+INTGGF+ G LNTG Sbjct 440 FGNSGFENMGVGNSGAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTG 499 Query 237 FFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNS 296 F S + Q NSGF N GTGNSGF NSG NSG+ NT+T + F G+S Sbjct 500 FGSPVDQPVMNSGFGNIGTGNSGF-------------NNSGDANSGFQNTNTGAFFIGHS 546 Query 297 GVLNTGYG------------NSGFYNAAVNNTGI--------FVTGVMSSGFFNFGTGNS 336 G+LN+G G N+G +N NNTGI F T +SG N G +S Sbjct 547 GLLNSGGGQHVGISNSGTGFNTGLFNTGFNNTGIGNSATNAAFTT---TSGVANSGDNSS 603 Query 337 GLLVSGNGLSGFFK 350 G +GN SGFF Sbjct 604 GGFNAGNDQSGFFD 617 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 176/369 (48%), Positives = 197/369 (54%), Gaps = 50/369 (13%) Query 9 GSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNT 68 G L +G N G GNI S GNIGD N GNGN GN N GSGNTG N+G GNT Sbjct 186 GPAALAIPALGIGNTGIGNIFSI----GNIGDYNLGNGNTGNANLGSGNTGQANLGSGNT 241 Query 69 GSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFG 128 G NFG GNT N N G G N G+ N+G GN G GN GL N G GN G G Sbjct 242 GFFNFGSGNTANTNFGSG------------NLGNLNLGSGNDGNGNFGLGNIGDGNRGSG 289 Query 129 NSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFG 188 N G+ N G NAG+ N G N GS N G AN G N G + GN N G N GN N G Sbjct 290 NVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGNNNLGIANLGNNNIGIG 349 Query 189 NSGDGNSGF--LNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFF-SAMTQAG 245 +GD G LN+G N G GN+G+ N GL NSGN N G FN G N GFF S T G Sbjct 350 LTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNSGDSNFGFFNSGDTNTG 409 Query 246 ------PNSGFFNAGTGNSGFGH--NDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSG 297 N+GF NAG+GN GFG+ N+ G GNSG +N G GNSG NT + NSG Sbjct 410 FGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNSGAYNTGSF-----NSG 464 Query 298 VLNTGYGNSGFYNAAVNNTGIFVTG------------------VMSSGFFNFGTGNSGLL 339 LNTG NSG +N N+G TG VM+SGF N GTGNSG Sbjct 465 TLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTGFGSPVDQPVMNSGFGNIGTGNSGFN 524 Query 340 VSGNGLSGF 348 SG+ SGF Sbjct 525 NSGDANSGF 533 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 128/319 (41%), Positives = 165/319 (52%), Gaps = 76/319 (23%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N+G N G+ N+G N G +N G N GDTN G GN G N G GN GS N G Sbjct 370 FGNSGNNNIGLFNSGNNNIGFFNSGDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFG 429 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 FGN G+ NFGFGN+G N+G+ GNSG N G FNSGT N Sbjct 430 FGNAGNNNFGFGNSGFENMGV----------------------GNSGAYNTGSFNSGTLN 467 Query 125 VGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGS-LNAGNI 183 G NSG NTG+ N+G++NTG ++ G NTG FGS ++ + Sbjct 468 TGDLNSGDFNTGWANSGDINTGGFHSGDLNTG------------------FGSPVDQPVM 509 Query 184 NSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTG---LGNSGNINTGGFNPGTLNTGFFSA 240 NS FGN G GNSGF N+GD NSG N NTG +G+SG +N+GG Sbjct 510 NSGFGNIGTGNSGFNNSGDANSGFQN---TNTGAFFIGHSGLLNSGG------------- 553 Query 241 MTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLN 300 G + G N+GTG N+G+ N+GF N+G N++T + F SGV N Sbjct 554 ----GQHVGISNSGTG------------FNTGLFNTGFNNTGIGNSATNAAFTTTSGVAN 597 Query 301 TGYGNSGFYNAAVNNTGIF 319 +G +SG +NA + +G F Sbjct 598 SGDNSSGGFNAGNDQSGFF 616 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 79/183 (44%), Positives = 97/183 (54%), Gaps = 23/183 (12%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G +N+G GN G+ N GS N G+ N G N GD N G N+G+ N G ++G N G Sbjct 440 FGNSGFENMGVGNSGAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTG 499 Query 65 FG-------------NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGG---LNSGSG-NIGF 107 FG N G+GN GF N+G+ N G T G IG LNSG G ++G Sbjct 500 FGSPVDQPVMNSGFGNIGTGNSGFNNSGDANSGFQNTNTGAFFIGHSGLLNSGGGQHVGI 559 Query 108 GNSGTG-NVGLFNSGTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTG 166 NSGTG N GLFN+G N G GNS T N F +G N G ++G NAG +G Sbjct 560 SNSGTGFNTGLFNTGFNNTGIGNSAT-NAAF----TTTSGVANSGDNSSGGFNAGNDQSG 614 Query 167 FFD 169 FFD Sbjct 615 FFD 617 >gi|15840574|ref|NP_335611.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|13880753|gb|AAK45425.1| PPE family protein [Mycobacterium tuberculosis CDC1551] Length=636 Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 197/374 (53%), Positives = 231/374 (62%), Gaps = 46/374 (12%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 N G+ NLGSGN G+ N G GNIG N GSGN+G NFG N G+FN GS N GS N+GF Sbjct 278 NLGNLNLGSGNDGNGNFGLGNIGDGNRGSGNVGSFNFGTANAGSFNVGSANHGSPNVGFA 337 Query 67 NTGSGNFGFGNTGNNN----------IGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVG 116 N G+ N G N GNNN IGIGLTGD IGIG LNSG GN+GFGNSG N+G Sbjct 338 NLGNNNLGIANLGNNNLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIG 397 Query 117 LFNSGTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFG 176 LFNSG N+GF NSG +N GF N+G+ NTGF N G TNTG NAG+GN GF +AGN NFG Sbjct 398 LFNSGNNNIGFFNSGDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFG 457 Query 177 SLNAGNINSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTG 236 N+G N GNSG N+G N+G +N+G N+GD NTG NSG+INTGGF+ G LNTG Sbjct 458 FGNSGFENMGVGNSGAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTG 517 Query 237 FFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNS 296 F S + Q NSGF N GTGNSGF NSG NSG+ NT+T + F G+S Sbjct 518 FGSPVDQPVMNSGFGNIGTGNSGF-------------NNSGDANSGFQNTNTGAFFIGHS 564 Query 297 GVLNTGYG------------NSGFYNAAVNNTGI--------FVTGVMSSGFFNFGTGNS 336 G+LN+G G N+G +N NNTGI F T +SG N G +S Sbjct 565 GLLNSGGGQHVGISNSGTGFNTGLFNTGFNNTGIGNSATNAAFTT---TSGVANSGDNSS 621 Query 337 GLLVSGNGLSGFFK 350 G +GN SGFF Sbjct 622 GGFNAGNDQSGFFD 635 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 176/369 (48%), Positives = 197/369 (54%), Gaps = 50/369 (13%) Query 9 GSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNT 68 G L +G N G GNI S GNIGD N GNGN GN N GSGNTG N+G GNT Sbjct 204 GPAALAIPALGIGNTGIGNIFSI----GNIGDYNLGNGNTGNANLGSGNTGQANLGSGNT 259 Query 69 GSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFG 128 G NFG GNT N N G G N G+ N+G GN G GN GL N G GN G G Sbjct 260 GFFNFGSGNTANTNFGSG------------NLGNLNLGSGNDGNGNFGLGNIGDGNRGSG 307 Query 129 NSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFG 188 N G+ N G NAG+ N G N GS N G AN G N G + GN N G N GN N G Sbjct 308 NVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGNNNLGIANLGNNNIGIG 367 Query 189 NSGDGNSGF--LNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTGFF-SAMTQAG 245 +GD G LN+G N G GN+G+ N GL NSGN N G FN G N GFF S T G Sbjct 368 LTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNSGDSNFGFFNSGDTNTG 427 Query 246 ------PNSGFFNAGTGNSGFGH--NDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSG 297 N+GF NAG+GN GFG+ N+ G GNSG +N G GNSG NT + NSG Sbjct 428 FGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNSGAYNTGSF-----NSG 482 Query 298 VLNTGYGNSGFYNAAVNNTGIFVTG------------------VMSSGFFNFGTGNSGLL 339 LNTG NSG +N N+G TG VM+SGF N GTGNSG Sbjct 483 TLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTGFGSPVDQPVMNSGFGNIGTGNSGFN 542 Query 340 VSGNGLSGF 348 SG+ SGF Sbjct 543 NSGDANSGF 551 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 128/319 (41%), Positives = 165/319 (52%), Gaps = 76/319 (23%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G+ N+G N G+ N+G N G +N G N GDTN G GN G N G GN GS N G Sbjct 388 FGNSGNNNIGLFNSGNNNIGFFNSGDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFG 447 Query 65 FGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGN 124 FGN G+ NFGFGN+G N+G+ GNSG N G FNSGT N Sbjct 448 FGNAGNNNFGFGNSGFENMGV----------------------GNSGAYNTGSFNSGTLN 485 Query 125 VGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGS-LNAGNI 183 G NSG NTG+ N+G++NTG ++ G NTG FGS ++ + Sbjct 486 TGDLNSGDFNTGWANSGDINTGGFHSGDLNTG------------------FGSPVDQPVM 527 Query 184 NSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTG---LGNSGNINTGGFNPGTLNTGFFSA 240 NS FGN G GNSGF N+GD NSG N NTG +G+SG +N+GG Sbjct 528 NSGFGNIGTGNSGFNNSGDANSGFQN---TNTGAFFIGHSGLLNSGG------------- 571 Query 241 MTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLN 300 G + G N+GTG N+G+ N+GF N+G N++T + F SGV N Sbjct 572 ----GQHVGISNSGTG------------FNTGLFNTGFNNTGIGNSATNAAFTTTSGVAN 615 Query 301 TGYGNSGFYNAAVNNTGIF 319 +G +SG +NA + +G F Sbjct 616 SGDNSSGGFNAGNDQSGFF 634 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 79/183 (44%), Positives = 97/183 (54%), Gaps = 23/183 (12%) Query 5 FRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIG 64 F N G +N+G GN G+ N GS N G+ N G N GD N G N+G+ N G ++G N G Sbjct 458 FGNSGFENMGVGNSGAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTG 517 Query 65 FG-------------NTGSGNFGFGNTGNNNIGIGLTGDGQIGIGG---LNSGSG-NIGF 107 FG N G+GN GF N+G+ N G T G IG LNSG G ++G Sbjct 518 FGSPVDQPVMNSGFGNIGTGNSGFNNSGDANSGFQNTNTGAFFIGHSGLLNSGGGQHVGI 577 Query 108 GNSGTG-NVGLFNSGTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTG 166 NSGTG N GLFN+G N G GNS T N F +G N G ++G NAG +G Sbjct 578 SNSGTGFNTGLFNTGFNNTGIGNSAT-NAAF----TTTSGVANSGDNSSGGFNAGNDQSG 632 Query 167 FFD 169 FFD Sbjct 633 FFD 635 >gi|308231748|ref|ZP_07413627.2| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|308370051|ref|ZP_07420132.2| PPE family protein [Mycobacterium tuberculosis SUMu002] gi|308370629|ref|ZP_07422169.2| PPE family protein [Mycobacterium tuberculosis SUMu003] 11 more sequence titles Length=619 Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 197/374 (53%), Positives = 231/374 (62%), Gaps = 46/374 (12%) Query 7 NFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFG 66 N G+ NLGSGN G+ N G GNIG N GSGN+G NFG N G+FN GS N GS N+GF Sbjct 261 NLGNLNLGSGNDGNGNFGLGNIGDGNRGSGNVGSFNFGTANAGSFNVGSANHGSPNVGFA 320 Query 67 NTGSGNFGFGNTGNNN----------IGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVG 116 N G+ N G N GNNN IGIGLTGD IGIG LNSG GN+GFGNSG N+G Sbjct 321 NLGNNNLGIANLGNNNLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIG 380 Query 117 LFNSGTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFG 176 LFNSG N+GF NSG +N GF N+G+ NTGF N G TNTG NAG+GN GF +AGN NFG Sbjct 381 LFNSGNNNIGFFNSGDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFG 440 Query 177 SLNAGNINSSFGNSGDGNSGFLNAGDVNSGVGNAGDVNTGLGNSGNINTGGFNPGTLNTG 236 N+G N GNSG N+G N+G +N+G N+GD NTG NSG+INTGGF+ G LNTG Sbjct 441 FGNSGFENMGVGNSGAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTG 500 Query 237 FFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNS 296 F S + Q NSGF N GTGNSGF NSG NSG+ NT+T + F G+S Sbjct 501 FGSPVDQPVMNSGFGNIGTGNSGF-------------NNSGDANSGFQNTNTGAFFIGHS 547 Query 297 GVLNTGYG------------NSGFYNAAVNNTGI--------FVTGVMSSGFFNFGTGNS 336 G+LN+G G N+G +N NNTGI F T +SG N G +S Sbjct 548 GLLNSGGGQHVGISNSGTGFNTGLFNTGFNNTGIGNSATNAAFTT---TSGVANSGDNSS 604 Query 337 GLLVSGNGLSGFFK 350 G +GN SGFF Sbjct 605 GGFNAGNDQSGFFD 618 Lambda K H 0.310 0.136 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 660773121752 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40