BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2362c Length=265 Score E Sequences producing significant alignments: (Bits) Value gi|339295263|gb|AEJ47374.1| hypothetical protein CCDC5079_2184 [... 530 8e-149 gi|308375863|ref|ZP_07445349.2| hypothetical protein TMGG_00923 ... 530 1e-148 gi|15609499|ref|NP_216878.1| DNA repair protein RecO [Mycobacter... 530 1e-148 gi|308379182|ref|ZP_07485400.2| hypothetical protein TMJG_00632 ... 529 2e-148 gi|183983652|ref|YP_001851943.1| recombination protein O RecO [M... 496 1e-138 gi|118618890|ref|YP_907222.1| DNA repair protein RecO [Mycobacte... 494 4e-138 gi|240172989|ref|ZP_04751647.1| DNA repair protein RecO [Mycobac... 476 1e-132 gi|296166314|ref|ZP_06848751.1| recombination protein O [Mycobac... 473 1e-131 gi|342857490|ref|ZP_08714146.1| DNA repair protein RecO [Mycobac... 471 6e-131 gi|41408240|ref|NP_961076.1| DNA repair protein RecO [Mycobacter... 469 1e-130 gi|254819382|ref|ZP_05224383.1| DNA repair protein RecO [Mycobac... 467 7e-130 gi|466972|gb|AAA17158.1| B1937_F1_25 [Mycobacterium leprae] 466 2e-129 gi|15827261|ref|NP_301524.1| DNA repair protein RecO [Mycobacter... 466 2e-129 gi|108800416|ref|YP_640613.1| DNA repair protein RecO [Mycobacte... 451 4e-125 gi|118462249|ref|YP_881252.1| DNA repair protein RecO [Mycobacte... 451 6e-125 gi|118467581|ref|YP_888763.1| DNA repair protein RecO [Mycobacte... 443 1e-122 gi|333990203|ref|YP_004522817.1| recombination protein O RecO [M... 439 2e-121 gi|120404781|ref|YP_954610.1| DNA repair protein RecO [Mycobacte... 432 4e-119 gi|145223300|ref|YP_001133978.1| DNA repair protein RecO [Mycoba... 426 2e-117 gi|169628765|ref|YP_001702414.1| DNA repair protein RecO [Mycoba... 417 8e-115 gi|111018235|ref|YP_701207.1| DNA repair protein RecO [Rhodococc... 395 2e-108 gi|312140282|ref|YP_004007618.1| DNA repair protein reco [Rhodoc... 389 2e-106 gi|226360360|ref|YP_002778138.1| DNA repair protein RecO [Rhodoc... 387 7e-106 gi|325677060|ref|ZP_08156730.1| recombination protein O [Rhodoco... 387 1e-105 gi|226307200|ref|YP_002767160.1| DNA repair protein RecO [Rhodoc... 380 7e-104 gi|54023419|ref|YP_117661.1| DNA repair protein RecO [Nocardia f... 379 3e-103 gi|229493249|ref|ZP_04387041.1| DNA repair protein RecO [Rhodoco... 377 6e-103 gi|262203043|ref|YP_003274251.1| DNA repair protein RecO [Gordon... 370 1e-100 gi|333918879|ref|YP_004492460.1| DNA repair protein recO [Amycol... 357 8e-97 gi|326381619|ref|ZP_08203313.1| DNA repair protein RecO [Gordoni... 354 8e-96 gi|343924056|ref|ZP_08763619.1| DNA repair protein RecO [Gordoni... 353 1e-95 gi|296140451|ref|YP_003647694.1| DNA repair protein RecO [Tsukam... 324 7e-87 gi|302528829|ref|ZP_07281171.1| DNA repair protein RecO [Strepto... 318 5e-85 gi|256375393|ref|YP_003099053.1| DNA repair protein RecO [Actino... 317 2e-84 gi|331698248|ref|YP_004334487.1| DNA repair protein recO [Pseudo... 315 5e-84 gi|134098078|ref|YP_001103739.1| DNA repair protein RecO [Saccha... 312 3e-83 gi|324998272|ref|ZP_08119384.1| DNA repair protein RecO [Pseudon... 310 1e-82 gi|257055406|ref|YP_003133238.1| DNA repair protein RecO [Saccha... 309 3e-82 gi|300788452|ref|YP_003768743.1| DNA repair protein RecO [Amycol... 307 8e-82 gi|317508571|ref|ZP_07966232.1| recombination protein O [Segnili... 306 2e-81 gi|258652079|ref|YP_003201235.1| DNA repair protein RecO [Nakamu... 296 2e-78 gi|291299550|ref|YP_003510828.1| DNA repair protein RecO [Stacke... 294 1e-77 gi|284990196|ref|YP_003408750.1| DNA repair protein RecO [Geoder... 293 1e-77 gi|296394229|ref|YP_003659113.1| DNA repair protein RecO [Segnil... 283 2e-74 gi|72161256|ref|YP_288913.1| DNA repair protein RecO [Thermobifi... 283 2e-74 gi|334337448|ref|YP_004542600.1| DNA repair protein recO [Isopte... 278 4e-73 gi|163840337|ref|YP_001624742.1| DNA repair protein RecO [Reniba... 278 4e-73 gi|297559706|ref|YP_003678680.1| DNA repair protein RecO [Nocard... 277 1e-72 gi|296130029|ref|YP_003637279.1| DNA repair protein RecO [Cellul... 276 3e-72 gi|330469589|ref|YP_004407332.1| DNA repair protein reco [Verruc... 273 2e-71 >gi|339295263|gb|AEJ47374.1| hypothetical protein CCDC5079_2184 [Mycobacterium tuberculosis CCDC5079] Length=266 Score = 530 bits (1365), Expect = 8e-149, Method: Compositional matrix adjust. Identities = 265/265 (100%), Positives = 265/265 (100%), Gaps = 0/265 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ Sbjct 2 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 61 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG Sbjct 62 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 121 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC Sbjct 122 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 181 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV Sbjct 182 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 241 Query 241 ERFYQADRSVAERRAALIGQDIAGG 265 ERFYQADRSVAERRAALIGQDIAGG Sbjct 242 ERFYQADRSVAERRAALIGQDIAGG 266 >gi|308375863|ref|ZP_07445349.2| hypothetical protein TMGG_00923 [Mycobacterium tuberculosis SUMu007] gi|308344944|gb|EFP33795.1| hypothetical protein TMGG_00923 [Mycobacterium tuberculosis SUMu007] Length=273 Score = 530 bits (1364), Expect = 1e-148, Method: Compositional matrix adjust. Identities = 265/265 (100%), Positives = 265/265 (100%), Gaps = 0/265 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ Sbjct 9 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 68 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG Sbjct 69 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 128 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC Sbjct 129 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 188 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV Sbjct 189 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 248 Query 241 ERFYQADRSVAERRAALIGQDIAGG 265 ERFYQADRSVAERRAALIGQDIAGG Sbjct 249 ERFYQADRSVAERRAALIGQDIAGG 273 >gi|15609499|ref|NP_216878.1| DNA repair protein RecO [Mycobacterium tuberculosis H37Rv] gi|15841874|ref|NP_336911.1| DNA repair protein RecO [Mycobacterium tuberculosis CDC1551] gi|31793539|ref|NP_856032.1| DNA repair protein RecO [Mycobacterium bovis AF2122/97] 78 more sequence titles Length=265 Score = 530 bits (1364), Expect = 1e-148, Method: Compositional matrix adjust. Identities = 265/265 (100%), Positives = 265/265 (100%), Gaps = 0/265 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ Sbjct 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG Sbjct 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC Sbjct 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV Sbjct 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 Query 241 ERFYQADRSVAERRAALIGQDIAGG 265 ERFYQADRSVAERRAALIGQDIAGG Sbjct 241 ERFYQADRSVAERRAALIGQDIAGG 265 >gi|308379182|ref|ZP_07485400.2| hypothetical protein TMJG_00632 [Mycobacterium tuberculosis SUMu010] gi|308357820|gb|EFP46671.1| hypothetical protein TMJG_00632 [Mycobacterium tuberculosis SUMu010] Length=307 Score = 529 bits (1362), Expect = 2e-148, Method: Compositional matrix adjust. Identities = 265/265 (100%), Positives = 265/265 (100%), Gaps = 0/265 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ Sbjct 43 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 102 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG Sbjct 103 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 162 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC Sbjct 163 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 222 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV Sbjct 223 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 282 Query 241 ERFYQADRSVAERRAALIGQDIAGG 265 ERFYQADRSVAERRAALIGQDIAGG Sbjct 283 ERFYQADRSVAERRAALIGQDIAGG 307 >gi|183983652|ref|YP_001851943.1| recombination protein O RecO [Mycobacterium marinum M] gi|238690926|sp|B2HLB2.1|RECO_MYCMM RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|183176978|gb|ACC42088.1| recombination protein O RecO [Mycobacterium marinum M] Length=265 Score = 496 bits (1277), Expect = 1e-138, Method: Compositional matrix adjust. Identities = 246/265 (93%), Positives = 254/265 (96%), Gaps = 0/265 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFG+RLEPFAHI+ Q Sbjct 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGSRLEPFAHIDAQ 60 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 LHPGRNLDIVTQVVS+DAFA DIV DYGRYTCGCA+LETAERLAGEERAPAPALHRLTVG Sbjct 61 LHPGRNLDIVTQVVSIDAFAADIVNDYGRYTCGCAMLETAERLAGEERAPAPALHRLTVG 120 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRAVADG RPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIA GGSVC HC Sbjct 121 ALRAVADGSRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIAAGGSVCPHC 180 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RPAGSTTPPLGV+DLMSAL+DGDWEAA+ APQS RS+VSGLVAAHLQWHLERQLKTLPLV Sbjct 181 RPAGSTTPPLGVLDLMSALHDGDWEAAQGAPQSHRSYVSGLVAAHLQWHLERQLKTLPLV 240 Query 241 ERFYQADRSVAERRAALIGQDIAGG 265 ERFYQADRSVAERRAALIGQD G Sbjct 241 ERFYQADRSVAERRAALIGQDSECG 265 >gi|118618890|ref|YP_907222.1| DNA repair protein RecO [Mycobacterium ulcerans Agy99] gi|166221902|sp|A0PTT2.1|RECO_MYCUA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|118571000|gb|ABL05751.1| recombination protein O RecO [Mycobacterium ulcerans Agy99] Length=265 Score = 494 bits (1273), Expect = 4e-138, Method: Compositional matrix adjust. Identities = 245/265 (93%), Positives = 253/265 (96%), Gaps = 0/265 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFG+RLEPFAHI+ Q Sbjct 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGSRLEPFAHIDAQ 60 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 LHPGRNLDIVTQVVS+DAFA DIV DYGRYTCGCA+LETAERLAGEERAPAPALHRLTVG Sbjct 61 LHPGRNLDIVTQVVSIDAFAADIVNDYGRYTCGCAMLETAERLAGEERAPAPALHRLTVG 120 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRAVADG RPRDLLLDAYLLRAMGIAGW PALTECARCATPGPHRAFHIA GGSVC HC Sbjct 121 ALRAVADGSRPRDLLLDAYLLRAMGIAGWVPALTECARCATPGPHRAFHIAAGGSVCPHC 180 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RPAGSTTPPLGV+DLMSAL+DGDWEAA+ APQS RS+VSGLVAAHLQWHLERQLKTLPLV Sbjct 181 RPAGSTTPPLGVLDLMSALHDGDWEAAQGAPQSHRSYVSGLVAAHLQWHLERQLKTLPLV 240 Query 241 ERFYQADRSVAERRAALIGQDIAGG 265 ERFYQADRSVAERRAALIGQD G Sbjct 241 ERFYQADRSVAERRAALIGQDSECG 265 >gi|240172989|ref|ZP_04751647.1| DNA repair protein RecO [Mycobacterium kansasii ATCC 12478] Length=265 Score = 476 bits (1225), Expect = 1e-132, Method: Compositional matrix adjust. Identities = 237/260 (92%), Positives = 248/260 (96%), Gaps = 0/260 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHI+ Q Sbjct 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDAQ 60 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 LHPGRNLDIVTQVVSVDAFATDIV DYGRYTCGCA+LETAERLAGEERAPAPALHRLTVG Sbjct 61 LHPGRNLDIVTQVVSVDAFATDIVNDYGRYTCGCAMLETAERLAGEERAPAPALHRLTVG 120 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRAVADG+RPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIA GGSVCAHC Sbjct 121 ALRAVADGRRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIAAGGSVCAHC 180 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RPAG+TTPPLGV++LMSAL+DGDW AAE APQS R +VSGLVAAHLQWHLERQLKTLPLV Sbjct 181 RPAGATTPPLGVLELMSALHDGDWAAAEQAPQSHRGYVSGLVAAHLQWHLERQLKTLPLV 240 Query 241 ERFYQADRSVAERRAALIGQ 260 ER Y+ D ++AERRAAL Q Sbjct 241 ERTYRIDHTIAERRAALTRQ 260 >gi|296166314|ref|ZP_06848751.1| recombination protein O [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898323|gb|EFG77892.1| recombination protein O [Mycobacterium parascrofulaceum ATCC BAA-614] Length=267 Score = 473 bits (1217), Expect = 1e-131, Method: Compositional matrix adjust. Identities = 233/265 (88%), Positives = 248/265 (94%), Gaps = 0/265 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHI+ Q Sbjct 3 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDAQ 62 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 LHPGRNLDIVTQVVS+DAFATDIV+DYGRYTCGCA+LETAERLAGEERAPAPALHRLTV Sbjct 63 LHPGRNLDIVTQVVSIDAFATDIVSDYGRYTCGCAMLETAERLAGEERAPAPALHRLTVS 122 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRAVADG+R RDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFH+ GGSVC HC Sbjct 123 ALRAVADGRRSRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHVGAGGSVCTHC 182 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RPAGSTTPP GV+DLMSAL+DG+WE AE APQS RS+VSGLVAAHLQWHLERQLKTLPLV Sbjct 183 RPAGSTTPPPGVLDLMSALHDGEWEFAEQAPQSHRSYVSGLVAAHLQWHLERQLKTLPLV 242 Query 241 ERFYQADRSVAERRAALIGQDIAGG 265 ER Y DR++A+RRAAL +D+ G Sbjct 243 ERTYHVDRTIAQRRAALAERDLDCG 267 >gi|342857490|ref|ZP_08714146.1| DNA repair protein RecO [Mycobacterium colombiense CECT 3035] gi|342134823|gb|EGT87989.1| DNA repair protein RecO [Mycobacterium colombiense CECT 3035] Length=265 Score = 471 bits (1211), Expect = 6e-131, Method: Compositional matrix adjust. Identities = 231/265 (88%), Positives = 246/265 (93%), Gaps = 0/265 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHI+ Q Sbjct 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDAQ 60 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 LHPGRNLDIVTQVVS+DAFATDIV DYGRYTCGCA+LETAERLAGEERAPAPALH LTV Sbjct 61 LHPGRNLDIVTQVVSIDAFATDIVNDYGRYTCGCAMLETAERLAGEERAPAPALHGLTVS 120 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRAVADG+R RDLLLDAYLLRAMGIAGWAPAL ECARCATPGPHRAFH+ GGSVC HC Sbjct 121 ALRAVADGRRSRDLLLDAYLLRAMGIAGWAPALNECARCATPGPHRAFHVGAGGSVCTHC 180 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RPAGSTTPP GV+DLMSAL+DGDW+ AE PQS R++VSGLVAAHLQWHLERQLKTLPLV Sbjct 181 RPAGSTTPPPGVLDLMSALHDGDWDFAEKTPQSHRNYVSGLVAAHLQWHLERQLKTLPLV 240 Query 241 ERFYQADRSVAERRAALIGQDIAGG 265 ER Y DR++A++RAALIGQD+ G Sbjct 241 ERTYHVDRTIADQRAALIGQDMDCG 265 >gi|41408240|ref|NP_961076.1| DNA repair protein RecO [Mycobacterium avium subsp. paratuberculosis K-10] gi|61215113|sp|Q73Y16.1|RECO_MYCPA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|41396595|gb|AAS04459.1| hypothetical protein MAP_2142c [Mycobacterium avium subsp. paratuberculosis K-10] Length=265 Score = 469 bits (1208), Expect = 1e-130, Method: Compositional matrix adjust. Identities = 231/265 (88%), Positives = 246/265 (93%), Gaps = 0/265 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHI+ Q Sbjct 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDAQ 60 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 LHPGRNLDIVTQVVS+DAFATDIV+DYGRYTC CA+LETAERLAGEERAPAPALH LTV Sbjct 61 LHPGRNLDIVTQVVSIDAFATDIVSDYGRYTCACAMLETAERLAGEERAPAPALHGLTVS 120 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRAVADG+R RDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFH+ GGSVC HC Sbjct 121 ALRAVADGRRSRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHVGAGGSVCPHC 180 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RPAGSTTPP GV+DLMSAL+DGDWE AE PQS R++VSGLVAAHLQWHLERQLKTLPLV Sbjct 181 RPAGSTTPPPGVLDLMSALHDGDWEFAEQTPQSHRNYVSGLVAAHLQWHLERQLKTLPLV 240 Query 241 ERFYQADRSVAERRAALIGQDIAGG 265 ER Y DR++A++RA LIGQD+ G Sbjct 241 ERTYHIDRTIADQRATLIGQDMDCG 265 >gi|254819382|ref|ZP_05224383.1| DNA repair protein RecO [Mycobacterium intracellulare ATCC 13950] Length=265 Score = 467 bits (1202), Expect = 7e-130, Method: Compositional matrix adjust. Identities = 229/265 (87%), Positives = 245/265 (93%), Gaps = 0/265 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHI+ Q Sbjct 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDAQ 60 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 LHPGRNLDIVTQVVS+DAFATDIV+DYGRYTCGCA+LETAERLAGEERAPAPALH LTV Sbjct 61 LHPGRNLDIVTQVVSIDAFATDIVSDYGRYTCGCAMLETAERLAGEERAPAPALHGLTVS 120 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRAVADG+R R LLLDAYLLRAMGIAGWAPAL ECARCATPGPHRAFH+ GGSVC HC Sbjct 121 ALRAVADGRRSRGLLLDAYLLRAMGIAGWAPALNECARCATPGPHRAFHVGAGGSVCTHC 180 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RPAGSTTPP GV+DLMSAL+DGDW+ AE PQS R++VSGLVAAHLQWHLERQLKTLPLV Sbjct 181 RPAGSTTPPPGVLDLMSALHDGDWDFAEKTPQSHRNYVSGLVAAHLQWHLERQLKTLPLV 240 Query 241 ERFYQADRSVAERRAALIGQDIAGG 265 ER Y DR++A++RA LIGQD+ G Sbjct 241 ERTYHVDRTIADQRATLIGQDMDCG 265 >gi|466972|gb|AAA17158.1| B1937_F1_25 [Mycobacterium leprae] Length=269 Score = 466 bits (1198), Expect = 2e-129, Method: Compositional matrix adjust. Identities = 232/268 (87%), Positives = 246/268 (92%), Gaps = 3/268 (1%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 MRLYRD A+VLRQH LGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFA+I+ Q Sbjct 2 MRLYRDWALVLRQHNLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAYIDAQ 61 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 LHPGRNLDIVTQVVS+DAFATDIV+DYGRYTCGCA+LETAERLAGEERAPAP LHRLTV Sbjct 62 LHPGRNLDIVTQVVSIDAFATDIVSDYGRYTCGCAMLETAERLAGEERAPAPTLHRLTVS 121 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRAVADG RPRDLLLDAYLLRAMGIAGWAPALT CARCATPGPHRAFHIA GGSVC HC Sbjct 122 ALRAVADGNRPRDLLLDAYLLRAMGIAGWAPALTACARCATPGPHRAFHIAAGGSVCVHC 181 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RPAGSTTPP GV++LMSAL+DGDW A+ APQS RS+ SGLVAAHLQWHLERQLKTLPLV Sbjct 182 RPAGSTTPPRGVLELMSALHDGDWGTAQQAPQSHRSYASGLVAAHLQWHLERQLKTLPLV 241 Query 241 ERF---YQADRSVAERRAALIGQDIAGG 265 ER YQ DRS+AERRAAL+ QD+A G Sbjct 242 ERTHQAYQVDRSIAERRAALVRQDMACG 269 >gi|15827261|ref|NP_301524.1| DNA repair protein RecO [Mycobacterium leprae TN] gi|221229739|ref|YP_002503155.1| DNA repair protein RecO [Mycobacterium leprae Br4923] gi|20139698|sp|Q9CCN0.1|RECO_MYCLE RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|254764647|sp|B8ZUT3.1|RECO_MYCLB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|13092810|emb|CAC30141.1| conserved hypothetical protein [Mycobacterium leprae] gi|219932846|emb|CAR70726.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length=268 Score = 466 bits (1198), Expect = 2e-129, Method: Compositional matrix adjust. Identities = 232/268 (87%), Positives = 246/268 (92%), Gaps = 3/268 (1%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 MRLYRD A+VLRQH LGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFA+I+ Q Sbjct 1 MRLYRDWALVLRQHNLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAYIDAQ 60 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 LHPGRNLDIVTQVVS+DAFATDIV+DYGRYTCGCA+LETAERLAGEERAPAP LHRLTV Sbjct 61 LHPGRNLDIVTQVVSIDAFATDIVSDYGRYTCGCAMLETAERLAGEERAPAPTLHRLTVS 120 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRAVADG RPRDLLLDAYLLRAMGIAGWAPALT CARCATPGPHRAFHIA GGSVC HC Sbjct 121 ALRAVADGNRPRDLLLDAYLLRAMGIAGWAPALTACARCATPGPHRAFHIAAGGSVCVHC 180 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RPAGSTTPP GV++LMSAL+DGDW A+ APQS RS+ SGLVAAHLQWHLERQLKTLPLV Sbjct 181 RPAGSTTPPRGVLELMSALHDGDWGTAQQAPQSHRSYASGLVAAHLQWHLERQLKTLPLV 240 Query 241 ERF---YQADRSVAERRAALIGQDIAGG 265 ER YQ DRS+AERRAAL+ QD+A G Sbjct 241 ERTHQAYQVDRSIAERRAALVRQDMACG 268 >gi|108800416|ref|YP_640613.1| DNA repair protein RecO [Mycobacterium sp. MCS] gi|119869545|ref|YP_939497.1| DNA repair protein RecO [Mycobacterium sp. KMS] gi|126436039|ref|YP_001071730.1| DNA repair protein RecO [Mycobacterium sp. JLS] 6 more sequence titles Length=276 Score = 451 bits (1160), Expect = 4e-125, Method: Compositional matrix adjust. Identities = 221/265 (84%), Positives = 241/265 (91%), Gaps = 0/265 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHI+VQ Sbjct 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDVQ 60 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 LHPGRNLDIVTQV ++DAFA+DIV+DYGRYT CA+LETAERLAGEERAP PALHRLTVG Sbjct 61 LHPGRNLDIVTQVQAIDAFASDIVSDYGRYTSACAVLETAERLAGEERAPMPALHRLTVG 120 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRAVADG RPR+L+LDAYLLRAMGIAGWAPALTECARCATPGPHRAFH+A GGSVC HC Sbjct 121 ALRAVADGSRPRELVLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHVAAGGSVCVHC 180 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RP+GS TPP V+DLMSAL+DGDW AAEA+ S RS SGLVAAHLQWHLERQL+TLPLV Sbjct 181 RPSGSVTPPQAVLDLMSALHDGDWPAAEASTPSHRSQASGLVAAHLQWHLERQLRTLPLV 240 Query 241 ERFYQADRSVAERRAALIGQDIAGG 265 ER Y+ D +VA+ R +L+ QD+ G Sbjct 241 ERVYRVDHAVADHRISLLRQDVHRG 265 >gi|118462249|ref|YP_881252.1| DNA repair protein RecO [Mycobacterium avium 104] gi|118163536|gb|ABK64433.1| DNA repair protein RecO [Mycobacterium avium 104] gi|336461689|gb|EGO40552.1| DNA repair protein RecO [Mycobacterium avium subsp. paratuberculosis S397] Length=256 Score = 451 bits (1159), Expect = 6e-125, Method: Compositional matrix adjust. Identities = 221/256 (87%), Positives = 237/256 (93%), Gaps = 0/256 (0%) Query 10 VLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQLHPGRNLDI 69 +LRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHI+ QLHPGRNLDI Sbjct 1 MLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDAQLHPGRNLDI 60 Query 70 VTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVGALRAVADGQ 129 VTQVVS+DAFATDIV+DYGRYTC CA+LETAERLAGEERAPAPALH LTV ALRAVADG+ Sbjct 61 VTQVVSIDAFATDIVSDYGRYTCACAMLETAERLAGEERAPAPALHGLTVSALRAVADGR 120 Query 130 RPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHCRPAGSTTPP 189 R RDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFH+ GGSVC HCRPAGSTTPP Sbjct 121 RSRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHVGAGGSVCPHCRPAGSTTPP 180 Query 190 LGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLVERFYQADRS 249 GV+DLMSAL+DGDWE AE PQS R++VSGLVAAHLQWHLERQLKTLPLVER Y DR+ Sbjct 181 PGVLDLMSALHDGDWEFAEQTPQSHRNYVSGLVAAHLQWHLERQLKTLPLVERTYHIDRT 240 Query 250 VAERRAALIGQDIAGG 265 +A++RA LIGQD+ G Sbjct 241 IADQRATLIGQDMDCG 256 >gi|118467581|ref|YP_888763.1| DNA repair protein RecO [Mycobacterium smegmatis str. MC2 155] gi|166221898|sp|A0R0S5.1|RECO_MYCS2 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|118168868|gb|ABK69764.1| DNA repair protein RecO [Mycobacterium smegmatis str. MC2 155] Length=280 Score = 443 bits (1140), Expect = 1e-122, Method: Compositional matrix adjust. Identities = 215/265 (82%), Positives = 240/265 (91%), Gaps = 0/265 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHI+VQ Sbjct 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDVQ 60 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 LHPGRNLDIVTQV ++DAFA DIV+DYGRYT CA+LETAERLAGEERAP P LHRLTV Sbjct 61 LHPGRNLDIVTQVQAIDAFAADIVSDYGRYTTACAMLETAERLAGEERAPMPDLHRLTVA 120 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRA+ADG+R R+L+LD+YLLRAM IAGWAPALTECARCA PGPHRAFH+A GGSVC HC Sbjct 121 ALRAIADGRRARELVLDSYLLRAMAIAGWAPALTECARCAAPGPHRAFHVAAGGSVCVHC 180 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RP+GS+TPP V++LMSAL+DGDWE AE++ RS SGL+AAHLQWHLERQL+TLPLV Sbjct 181 RPSGSSTPPQAVLELMSALHDGDWEYAESSTPPHRSQASGLIAAHLQWHLERQLRTLPLV 240 Query 241 ERFYQADRSVAERRAALIGQDIAGG 265 ER Y+ DR+VAE+RAAL+ QD+A G Sbjct 241 ERGYRVDRTVAEQRAALVRQDMAHG 265 >gi|333990203|ref|YP_004522817.1| recombination protein O RecO [Mycobacterium sp. JDM601] gi|333486171|gb|AEF35563.1| recombination protein O RecO [Mycobacterium sp. JDM601] Length=266 Score = 439 bits (1129), Expect = 2e-121, Method: Compositional matrix adjust. Identities = 213/246 (87%), Positives = 231/246 (94%), Gaps = 0/246 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHI+VQ Sbjct 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDVQ 60 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 LHPGRNLDIVTQVVSVDAFA+DIV+DYGRYTC C +LETAERLAG ERAPA ALHRLTVG Sbjct 61 LHPGRNLDIVTQVVSVDAFASDIVSDYGRYTCACVMLETAERLAGTERAPATALHRLTVG 120 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRAVADG+RPR+L+LDAYLLRAM +AGWAPALTECARCATPGPHRAFH+A GGSVC HC Sbjct 121 ALRAVADGRRPRELVLDAYLLRAMSVAGWAPALTECARCATPGPHRAFHVAAGGSVCGHC 180 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RPAGSTTPP+GV+DLM+AL+DGDWE AE + + RSH SGLVAAHLQWHLER+L+TLPLV Sbjct 181 RPAGSTTPPMGVLDLMAALHDGDWELAERSVSAHRSHASGLVAAHLQWHLERRLRTLPLV 240 Query 241 ERFYQA 246 ER +A Sbjct 241 ERVQRA 246 >gi|120404781|ref|YP_954610.1| DNA repair protein RecO [Mycobacterium vanbaalenii PYR-1] gi|119957599|gb|ABM14604.1| DNA replication and repair protein RecO [Mycobacterium vanbaalenii PYR-1] Length=284 Score = 432 bits (1110), Expect = 4e-119, Method: Compositional matrix adjust. Identities = 210/265 (80%), Positives = 236/265 (90%), Gaps = 4/265 (1%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 MRLYRDRAVVLRQHKLGEADRIV+LLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHI+VQ Sbjct 8 MRLYRDRAVVLRQHKLGEADRIVSLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDVQ 67 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 LHPGRNLDIVTQV ++DAFA+DIV+DYGRYTC CA+LETAER+AGEERAP PALH+LTV Sbjct 68 LHPGRNLDIVTQVQAIDAFASDIVSDYGRYTCACAMLETAERIAGEERAPVPALHKLTVA 127 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRAVADG RPR+L+LDAYLLRAMG+AGWAP+L ECARCA PGPHRAFH+A GGSVC HC Sbjct 128 ALRAVADGTRPRELVLDAYLLRAMGVAGWAPSLIECARCAAPGPHRAFHVAAGGSVCVHC 187 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RP+GS TPP V+DLM+ALY+GDWE A+ + + RS SGLVAAHLQWHLERQL+TLPLV Sbjct 188 RPSGSVTPPQAVLDLMAALYEGDWEHAQISTTAHRSQASGLVAAHLQWHLERQLRTLPLV 247 Query 241 ERFYQADRSVAERRAALIGQDIAGG 265 ER Y+A+R A+ I QD+A G Sbjct 248 ERVYRAERMA----ASGIRQDVAHG 268 >gi|145223300|ref|YP_001133978.1| DNA repair protein RecO [Mycobacterium gilvum PYR-GCK] gi|315443760|ref|YP_004076639.1| DNA replication and repair protein RecO [Mycobacterium sp. Spyr1] gi|189039659|sp|A4T2B7.1|RECO_MYCGI RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|145215786|gb|ABP45190.1| DNA replication and repair protein RecO [Mycobacterium gilvum PYR-GCK] gi|315262063|gb|ADT98804.1| DNA replication and repair protein RecO [Mycobacterium sp. Spyr1] Length=273 Score = 426 bits (1095), Expect = 2e-117, Method: Compositional matrix adjust. Identities = 212/265 (80%), Positives = 235/265 (89%), Gaps = 6/265 (2%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 MRLYRDRAVVLRQHKLGEADRIV+LLTR+HGLVRAVAKGVRRTRSKFGARLEPFAHI+VQ Sbjct 1 MRLYRDRAVVLRQHKLGEADRIVSLLTREHGLVRAVAKGVRRTRSKFGARLEPFAHIDVQ 60 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 LHPGRNLDIVTQV ++DAFA+DIV+DYGRYTC CA+LETAER+AGEERAP PALHRLTV Sbjct 61 LHPGRNLDIVTQVQAIDAFASDIVSDYGRYTCACAMLETAERIAGEERAPVPALHRLTVA 120 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRAVADG RPR+L+LDAYLLRAMG+AGWAPAL ECARCA PGPHRAFH+A GGSVC HC Sbjct 121 ALRAVADGTRPRELVLDAYLLRAMGVAGWAPALIECARCAAPGPHRAFHVAAGGSVCVHC 180 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RP+GS TPP GV+DLM+ALYDGDWE A+ + + RS SGLVAAHLQWHLERQL+TLPLV Sbjct 181 RPSGSVTPPQGVLDLMAALYDGDWEHAQISTPAHRSQASGLVAAHLQWHLERQLRTLPLV 240 Query 241 ERFYQADRSVAERRAALIGQDIAGG 265 ER +A+ VA I QD+A G Sbjct 241 ERPGRAE--VARN----IRQDMAHG 259 >gi|169628765|ref|YP_001702414.1| DNA repair protein RecO [Mycobacterium abscessus ATCC 19977] gi|238688930|sp|B1MN48.1|RECO_MYCA9 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|169240732|emb|CAM61760.1| DNA repair protein RecO [Mycobacterium abscessus] Length=261 Score = 417 bits (1072), Expect = 8e-115, Method: Compositional matrix adjust. Identities = 202/256 (79%), Positives = 227/256 (89%), Gaps = 0/256 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 MRLYRDRAVVLRQHKLGEADRIVTLLTR HGLVRAVAKGVRRTRSKFG+RLEPFAHI+VQ Sbjct 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRQHGLVRAVAKGVRRTRSKFGSRLEPFAHIDVQ 60 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 LHPGRNLDIVTQV ++DAFA DIV+DYGRYT CAILETAER+AGEERAPA ALHRLTVG Sbjct 61 LHPGRNLDIVTQVQAIDAFAADIVSDYGRYTTACAILETAERIAGEERAPAVALHRLTVG 120 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRA+AD QR R+L+LDAYLLRAM IAGWAPA+ ECARCATPGPHRAFH+A GGSVC HC Sbjct 121 ALRAIADQQRSRELILDAYLLRAMSIAGWAPAIGECARCATPGPHRAFHVAAGGSVCVHC 180 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RPAG+ TPP GV++LM+AL+DGDW A + PQ+ R+ SGL+AAHLQWHLER+L+TLPLV Sbjct 181 RPAGAVTPPQGVLELMAALHDGDWAATDDVPQTQRTQASGLIAAHLQWHLERKLRTLPLV 240 Query 241 ERFYQADRSVAERRAA 256 ER + + S E + A Sbjct 241 ERGSRLNMSHGEEQPA 256 >gi|111018235|ref|YP_701207.1| DNA repair protein RecO [Rhodococcus jostii RHA1] gi|119361482|sp|Q0SHD7.1|RECO_RHOSR RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|110817765|gb|ABG93049.1| probable DNA repair protein RecO [Rhodococcus jostii RHA1] Length=271 Score = 395 bits (1016), Expect = 2e-108, Method: Compositional matrix adjust. Identities = 193/242 (80%), Positives = 211/242 (88%), Gaps = 0/242 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 MRLYRD AVVLRQHKLGEADRIVTLLTR HGLVRAVAKGVRRT+SKFGARLEPFAHI+VQ Sbjct 1 MRLYRDNAVVLRQHKLGEADRIVTLLTRQHGLVRAVAKGVRRTKSKFGARLEPFAHIDVQ 60 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 L+PGRNLDIVTQV +VDAFATDIV DY RYT CAILETAERLAGEERAPAP LHRLTVG Sbjct 61 LYPGRNLDIVTQVQTVDAFATDIVDDYSRYTTACAILETAERLAGEERAPAPQLHRLTVG 120 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRAVA+ RP +L+LDA+LLRAMG AGWAPAL +CARC+ PGPHRAFH+A GG+VC HC Sbjct 121 ALRAVAEHNRPCELILDAFLLRAMGFAGWAPALDDCARCSAPGPHRAFHVAAGGAVCVHC 180 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RP G+ TP GV+DLM AL GDW + E P+S R SGLVAAHLQWHLERQL+TLPL+ Sbjct 181 RPPGAATPSPGVLDLMDALIRGDWASTEDVPESLRGQASGLVAAHLQWHLERQLRTLPLI 240 Query 241 ER 242 ER Sbjct 241 ER 242 >gi|312140282|ref|YP_004007618.1| DNA repair protein reco [Rhodococcus equi 103S] gi|311889621|emb|CBH48938.1| DNA repair protein RecO [Rhodococcus equi 103S] Length=271 Score = 389 bits (1000), Expect = 2e-106, Method: Compositional matrix adjust. Identities = 191/242 (79%), Positives = 207/242 (86%), Gaps = 0/242 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 MRLYRD AVVLRQHKLGEADRIVTLLTR HGLVRAVAKGVRRT+SKFGARLEPFAHI+VQ Sbjct 1 MRLYRDYAVVLRQHKLGEADRIVTLLTRQHGLVRAVAKGVRRTKSKFGARLEPFAHIDVQ 60 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 LHPGRNLDIVTQV +VDAF DIV DYGRYT CAILETAERLAGEE+AP P LH LTVG Sbjct 61 LHPGRNLDIVTQVSTVDAFGADIVDDYGRYTTACAILETAERLAGEEKAPVPRLHSLTVG 120 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRAV D RP +L+LDAYLLRAMG AGWAPALT+CARCA PGPHRAFH+A GG+VC HC Sbjct 121 ALRAVGDRTRPVELILDAYLLRAMGYAGWAPALTDCARCAAPGPHRAFHVAAGGAVCVHC 180 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RP G+ TP GV+DLM AL G W+ E A + RS SGL+AAHLQWHLERQL+TLPL+ Sbjct 181 RPPGAATPSPGVLDLMDALAHGQWKDTELATPAMRSQASGLIAAHLQWHLERQLRTLPLI 240 Query 241 ER 242 ER Sbjct 241 ER 242 >gi|226360360|ref|YP_002778138.1| DNA repair protein RecO [Rhodococcus opacus B4] gi|254764656|sp|C1AUI5.1|RECO_RHOOB RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|226238845|dbj|BAH49193.1| DNA repair protein RecO [Rhodococcus opacus B4] Length=271 Score = 387 bits (995), Expect = 7e-106, Method: Compositional matrix adjust. Identities = 190/242 (79%), Positives = 209/242 (87%), Gaps = 0/242 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 MRLYRD AVVLRQHKLGEADRIVTLLTR HGLVRAVAKGVRRT+SKFGARLEPFAHI+VQ Sbjct 1 MRLYRDNAVVLRQHKLGEADRIVTLLTRQHGLVRAVAKGVRRTKSKFGARLEPFAHIDVQ 60 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 L+PGRNLDIVTQV +VDAFATDIV DY RYT CAILETAERLAGEERAPA LHRLTVG Sbjct 61 LYPGRNLDIVTQVQTVDAFATDIVDDYTRYTTACAILETAERLAGEERAPALQLHRLTVG 120 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRAVA+ RP +L+LDA+LLRAMG AGWAPAL +CARC+ PGPHRAFH+A GG+VC C Sbjct 121 ALRAVAEHHRPCELILDAFLLRAMGFAGWAPALDDCARCSAPGPHRAFHVAAGGAVCVQC 180 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RP G+ TP GV+DLM AL+ GDW + E P+ R SGLVAAHLQWHLERQL+TLPL+ Sbjct 181 RPPGAATPSPGVLDLMDALFRGDWASTEQVPEWLRGQASGLVAAHLQWHLERQLRTLPLI 240 Query 241 ER 242 ER Sbjct 241 ER 242 >gi|325677060|ref|ZP_08156730.1| recombination protein O [Rhodococcus equi ATCC 33707] gi|325552131|gb|EGD21823.1| recombination protein O [Rhodococcus equi ATCC 33707] Length=296 Score = 387 bits (993), Expect = 1e-105, Method: Compositional matrix adjust. Identities = 190/242 (79%), Positives = 207/242 (86%), Gaps = 0/242 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 +RLYRD AVVLRQHKLGEADRIVTLLTR HGLVRAVAKGVRRT+SKFGARLEPFAHI+VQ Sbjct 26 VRLYRDYAVVLRQHKLGEADRIVTLLTRQHGLVRAVAKGVRRTKSKFGARLEPFAHIDVQ 85 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 LHPGRNLDIVTQV +VDAF DIV DYGRYT CAILETAERLAGEE+AP P LH LTVG Sbjct 86 LHPGRNLDIVTQVSTVDAFGADIVDDYGRYTTACAILETAERLAGEEKAPVPRLHSLTVG 145 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRAV D RP +L+LDAYLLRAMG AGWAPALT+CARCA PGPHRAFH+A GG+VC HC Sbjct 146 ALRAVGDRTRPVELILDAYLLRAMGYAGWAPALTDCARCAAPGPHRAFHVAAGGAVCVHC 205 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RP G+ TP GV+DLM AL G W+ E A + RS SGL+AAHLQWHLERQL+TLPL+ Sbjct 206 RPPGAATPSPGVLDLMDALAHGQWKDTELATPAMRSQASGLIAAHLQWHLERQLRTLPLI 265 Query 241 ER 242 ER Sbjct 266 ER 267 >gi|226307200|ref|YP_002767160.1| DNA repair protein RecO [Rhodococcus erythropolis PR4] gi|259563682|sp|C1A1D6.1|RECO_RHOE4 RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|226186317|dbj|BAH34421.1| DNA repair protein RecO [Rhodococcus erythropolis PR4] Length=271 Score = 380 bits (977), Expect = 7e-104, Method: Compositional matrix adjust. Identities = 184/242 (77%), Positives = 207/242 (86%), Gaps = 0/242 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 MRLYRD AVVLR HKLGEAD IVTLLTR GLVRAVAKGVRRT SKFGARLEPFAHI+VQ Sbjct 1 MRLYRDTAVVLRLHKLGEADHIVTLLTRQFGLVRAVAKGVRRTTSKFGARLEPFAHIDVQ 60 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 L PG+NLDI+TQV +VDAFATDIV DY RYT CA+LETAERLAGEERAPAP L RLTVG Sbjct 61 LLPGKNLDIITQVQTVDAFATDIVDDYSRYTTACAVLETAERLAGEERAPAPQLQRLTVG 120 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRA+A+ RP + +LDA+LLRAMG AGWAPAL ECARC+ PGPHRAFH+A GG+VC +C Sbjct 121 ALRAIAEQARPVEFVLDAFLLRAMGYAGWAPALEECARCSAPGPHRAFHVAAGGAVCTYC 180 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RPAG+ TP GV+DLM AL G+WE ++AP + R+ SGLVAAHLQWHLERQL+TLPL+ Sbjct 181 RPAGAATPSPGVLDLMEALLRGEWEGTDSAPATLRTQASGLVAAHLQWHLERQLRTLPLI 240 Query 241 ER 242 ER Sbjct 241 ER 242 >gi|54023419|ref|YP_117661.1| DNA repair protein RecO [Nocardia farcinica IFM 10152] gi|61214801|sp|Q5YZU4.1|RECO_NOCFA RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|54014927|dbj|BAD56297.1| putative DNA repair protein [Nocardia farcinica IFM 10152] Length=256 Score = 379 bits (972), Expect = 3e-103, Method: Compositional matrix adjust. Identities = 184/242 (77%), Positives = 206/242 (86%), Gaps = 0/242 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 MRLYRD AVV+RQHKLGEADRIVTLLTR HGLVRAVAKGVRRTRS+FGARLEPF++I+VQ Sbjct 1 MRLYRDEAVVVRQHKLGEADRIVTLLTRQHGLVRAVAKGVRRTRSRFGARLEPFSYIDVQ 60 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 LHPGRNLD VTQV +V++FA DI+ DYGRYT CAILETAERLAGEERAPAP LH LT Sbjct 61 LHPGRNLDTVTQVHTVESFAADIIDDYGRYTTACAILETAERLAGEERAPAPKLHALTAS 120 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRA+A QRP +L+LDAYLLRAM AGWAPAL ECA+CATPGPHRAFH+A GG+VC HC Sbjct 121 ALRAIAAKQRPHELVLDAYLLRAMRFAGWAPALDECAKCATPGPHRAFHVAAGGAVCVHC 180 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RP G+ TP GV+D + AL G+W EA P+S R SGLVAAHLQWHLERQL+TLPL+ Sbjct 181 RPPGAATPAPGVLDHLVALARGEWAGIEAVPESTRKQASGLVAAHLQWHLERQLRTLPLI 240 Query 241 ER 242 ER Sbjct 241 ER 242 >gi|229493249|ref|ZP_04387041.1| DNA repair protein RecO [Rhodococcus erythropolis SK121] gi|229319980|gb|EEN85809.1| DNA repair protein RecO [Rhodococcus erythropolis SK121] Length=327 Score = 377 bits (969), Expect = 6e-103, Method: Compositional matrix adjust. Identities = 183/242 (76%), Positives = 207/242 (86%), Gaps = 0/242 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 +RLYRD AVVLR HKLGEAD IVTLLTR GLVRAVAKGVRRT SKFGARLEPFAHI+VQ Sbjct 57 VRLYRDTAVVLRLHKLGEADHIVTLLTRQFGLVRAVAKGVRRTTSKFGARLEPFAHIDVQ 116 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 L PG+NLDI+TQV +VDAFATDIV DY RYT CA+LETAERLAGEERAPAP L RLTVG Sbjct 117 LLPGKNLDIITQVQTVDAFATDIVDDYSRYTTACAVLETAERLAGEERAPAPQLQRLTVG 176 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRA+A+ RP + +LDA+LLRAMG AGWAPAL ECARC+ PGPHRAFH+A GG+VC +C Sbjct 177 ALRAIAEQARPVEFVLDAFLLRAMGYAGWAPALEECARCSAPGPHRAFHVAAGGAVCTYC 236 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RPAG+ TP GV+DLM AL G+WE ++AP + R+ SGLVAAHLQWHLERQL+TLPL+ Sbjct 237 RPAGAATPSPGVLDLMEALLRGEWEGTDSAPATLRTQASGLVAAHLQWHLERQLRTLPLI 296 Query 241 ER 242 ER Sbjct 297 ER 298 >gi|262203043|ref|YP_003274251.1| DNA repair protein RecO [Gordonia bronchialis DSM 43247] gi|262086390|gb|ACY22358.1| DNA repair protein RecO [Gordonia bronchialis DSM 43247] Length=252 Score = 370 bits (950), Expect = 1e-100, Method: Compositional matrix adjust. Identities = 181/242 (75%), Positives = 204/242 (85%), Gaps = 0/242 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 MR YRD AVVLRQHKLGEADRI+TLLT +HGLVRAVAKGVRRTRSKFGARLEPFAH++V Sbjct 1 MRFYRDEAVVLRQHKLGEADRIITLLTAEHGLVRAVAKGVRRTRSKFGARLEPFAHVDVH 60 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 L+PGRNLD+VTQV S+ A++ I ADYGRYT CA+LETAERLAGEERAPAP LHRLTVG Sbjct 61 LYPGRNLDVVTQVHSLHAYSDAIAADYGRYTTACAVLETAERLAGEERAPAPQLHRLTVG 120 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 AL A+A+ +RPR+L+LDA+LLRAM AGW PAL ECARCATPGPHRAFH+A GG+VC HC Sbjct 121 ALAALAEDRRPRELILDAFLLRAMHCAGWMPALDECARCATPGPHRAFHVAVGGAVCLHC 180 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RP G+ TP GV+DLM AL+ G WE A S R SGL AAHLQWHLERQL+TLPL+ Sbjct 181 RPPGAATPSPGVLDLMDALFRGQWEHTVDAGTSLRRQASGLTAAHLQWHLERQLRTLPLI 240 Query 241 ER 242 ER Sbjct 241 ER 242 >gi|333918879|ref|YP_004492460.1| DNA repair protein recO [Amycolicicoccus subflavus DQS3-9A1] gi|333481100|gb|AEF39660.1| DNA repair protein recO [Amycolicicoccus subflavus DQS3-9A1] Length=263 Score = 357 bits (917), Expect = 8e-97, Method: Compositional matrix adjust. Identities = 173/234 (74%), Positives = 195/234 (84%), Gaps = 0/234 (0%) Query 9 VVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQLHPGRNLD 68 +VLRQHKLGEADRI+TLLTR+HG+VRAVAKG+RRTRSKFGARLEPF H++V LHPGRNLD Sbjct 1 MVLRQHKLGEADRILTLLTREHGIVRAVAKGIRRTRSKFGARLEPFNHVDVLLHPGRNLD 60 Query 69 IVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVGALRAVADG 128 IVTQV +V+ FA+DI DYGRYT GCAILETAERLAGEE AP P L++LTVGALRAV G Sbjct 61 IVTQVHAVNTFASDIACDYGRYTTGCAILETAERLAGEEHAPVPRLYQLTVGALRAVGQG 120 Query 129 QRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHCRPAGSTTP 188 QR L+LDA+LLRAMG+AGWAPAL +CARC GPHRAFH+A GGSVC HCRP G+ TP Sbjct 121 QRETGLVLDAFLLRAMGLAGWAPALRDCARCGVHGPHRAFHVAAGGSVCVHCRPPGAATP 180 Query 189 PLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLVER 242 GV+DLM AL G+W AE RS SGL AAHLQWHLERQL+TLPL+ER Sbjct 181 SAGVLDLMDALVTGEWGYAEQTATQVRSQASGLTAAHLQWHLERQLRTLPLIER 234 >gi|326381619|ref|ZP_08203313.1| DNA repair protein RecO [Gordonia neofelifaecis NRRL B-59395] gi|326199866|gb|EGD57046.1| DNA repair protein RecO [Gordonia neofelifaecis NRRL B-59395] Length=273 Score = 354 bits (908), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 173/244 (71%), Positives = 201/244 (83%), Gaps = 2/244 (0%) Query 10 VLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQLHPGRNLDI 69 +LRQHKLGEADRI+T LT +HGLVRAVAKGVRRTRSKFGARLEPFAH++V +PGRNLD+ Sbjct 1 MLRQHKLGEADRIITFLTAEHGLVRAVAKGVRRTRSKFGARLEPFAHVDVHFYPGRNLDV 60 Query 70 VTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVGALRAVADGQ 129 +TQV S+ AF+ DIVADYGRYT CA+LETAERLAGEERAPA LHRLTVGAL A+A+ + Sbjct 61 ITQVDSLHAFSDDIVADYGRYTTACAVLETAERLAGEERAPAQHLHRLTVGALAALAEDR 120 Query 130 RPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHCRPAGSTTPP 189 R R L+LDA+LLRAM AGW PAL+ CARCA PGPHRAFH+A GG+VC HCRPAG+ TP Sbjct 121 RDRQLILDAFLLRAMSSAGWMPALSVCARCAQPGPHRAFHVAAGGAVCIHCRPAGAATPS 180 Query 190 LGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLVERFYQADRS 249 +GV+DLM AL G+WE +A S R +GL AAHLQWHLERQL+TLPL+ER QA Sbjct 181 VGVLDLMEALARGEWEHVTSASDSQRRQATGLTAAHLQWHLERQLRTLPLIER--QAPHR 238 Query 250 VAER 253 + ER Sbjct 239 LIER 242 >gi|343924056|ref|ZP_08763619.1| DNA repair protein RecO [Gordonia alkanivorans NBRC 16433] gi|343765861|dbj|GAA10545.1| DNA repair protein RecO [Gordonia alkanivorans NBRC 16433] Length=262 Score = 353 bits (907), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 173/233 (75%), Positives = 195/233 (84%), Gaps = 0/233 (0%) Query 10 VLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQLHPGRNLDI 69 +LRQHKLGEADRI+TLLT +HGLVRAVAKGVRRTRSKFGARLEPFAHI+V L+PGR+LD+ Sbjct 1 MLRQHKLGEADRIITLLTAEHGLVRAVAKGVRRTRSKFGARLEPFAHIDVHLYPGRSLDV 60 Query 70 VTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVGALRAVADGQ 129 VTQV S+ A IVADYGRYT CA+LETAERLAGEERAP LHRLTVGAL+A+A+ + Sbjct 61 VTQVHSLHALTDAIVADYGRYTTACAVLETAERLAGEERAPTRQLHRLTVGALQALAEDR 120 Query 130 RPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHCRPAGSTTPP 189 RPR+L+LDAYLLRAM AGW PAL ECARCA PGPHRAFH+A GG+VC HCRP GS TP Sbjct 121 RPRELILDAYLLRAMYSAGWMPALEECARCANPGPHRAFHVAAGGAVCLHCRPPGSATPS 180 Query 190 LGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLVER 242 GV+DLM AL+ G WE E + S R SGL AAHLQWHLERQL+TLPL+ER Sbjct 181 PGVLDLMDALFRGQWEHVEESSNSLRRQASGLTAAHLQWHLERQLRTLPLIER 233 >gi|296140451|ref|YP_003647694.1| DNA repair protein RecO [Tsukamurella paurometabola DSM 20162] gi|296028585|gb|ADG79355.1| DNA repair protein RecO [Tsukamurella paurometabola DSM 20162] Length=270 Score = 324 bits (831), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 165/242 (69%), Positives = 196/242 (81%), Gaps = 0/242 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 MR YRD AVVLRQHKLGEAD I+TLLTR++GLVRAVAKGVRR RS+FGARLE FAH+++Q Sbjct 4 MRSYRDSAVVLRQHKLGEADYILTLLTRENGLVRAVAKGVRRPRSRFGARLELFAHVDLQ 63 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 L+PGRNLD VTQV S+ A++ D+ DYGRYT CA++ETAERLAGEERAPAP LHRLTVG Sbjct 64 LYPGRNLDTVTQVHSIAAYSGDLAGDYGRYTTACAVIETAERLAGEERAPAPELHRLTVG 123 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRA+A G R RDL+L ++LLRAM AGWAPAL CARC GPHRAFH+A GG+VC HC Sbjct 124 ALRAIAAGLRDRDLILISFLLRAMDAAGWAPALDLCARCGDTGPHRAFHVAAGGAVCVHC 183 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RPAGS P GV+DL++AL D++ AE R +GL AAHLQWH+ RQL++LP++ Sbjct 184 RPAGSAVPAHGVLDLLAALARADFDFAETTGDRVRRQANGLAAAHLQWHVGRQLRSLPMI 243 Query 241 ER 242 ER Sbjct 244 ER 245 >gi|302528829|ref|ZP_07281171.1| DNA repair protein RecO [Streptomyces sp. AA4] gi|302437724|gb|EFL09540.1| DNA repair protein RecO [Streptomyces sp. AA4] Length=258 Score = 318 bits (815), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 158/242 (66%), Positives = 186/242 (77%), Gaps = 0/242 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 + LYRD VVLR HKLGEADRIVTLLT+ HG VRAVAKGVRRT S+FGARLEPF H++VQ Sbjct 2 VNLYRDTGVVLRTHKLGEADRIVTLLTKRHGKVRAVAKGVRRTSSRFGARLEPFGHVDVQ 61 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 +PGR+LD++TQV +VDAFA +VADY RYT AI ETA+RL+ EE P L+ L VG Sbjct 62 FYPGRSLDVITQVETVDAFALPLVADYQRYTAASAIAETADRLSAEEGEPVLKLYLLVVG 121 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRA+A GQR L+LDA+ LRAM AGWAPA+TECARC PGPH AF++A GGS+C C Sbjct 122 ALRALAGGQRDASLVLDAFFLRAMAYAGWAPAITECARCGLPGPHAAFNVAAGGSMCPDC 181 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 R AGS P V+ L+ AL G+W AE++P R SGLVAAHLQWHLERQL++LPLV Sbjct 182 RIAGSVHPAPEVLTLLDALLQGEWAVAESSPGITRRDASGLVAAHLQWHLERQLRSLPLV 241 Query 241 ER 242 ER Sbjct 242 ER 243 >gi|256375393|ref|YP_003099053.1| DNA repair protein RecO [Actinosynnema mirum DSM 43827] gi|255919696|gb|ACU35207.1| DNA repair protein RecO [Actinosynnema mirum DSM 43827] Length=250 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 153/240 (64%), Positives = 184/240 (77%), Gaps = 0/240 (0%) Query 3 LYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQLH 62 LYRD VVLR KLGEADRI+TLLT+ HG +RAVAKGVRRT S+FGARLEPF H++ Q H Sbjct 4 LYRDTGVVLRVQKLGEADRIITLLTQRHGKLRAVAKGVRRTSSRFGARLEPFGHVDAQFH 63 Query 63 PGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVGAL 122 PGR LD++TQV ++DAF +V DY RYT GCA+LETA+RL EE APA L+ L GAL Sbjct 64 PGRTLDVITQVETIDAFGVVLVDDYQRYTAGCAVLETADRLTSEEGAPALRLYLLVTGAL 123 Query 123 RAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHCRP 182 RA+ADG+R LLLDA+LLRAM AGWAPA+ ECARC PGPHR+F++ GG VCA+CRP Sbjct 124 RALADGRRDPSLLLDAFLLRAMAFAGWAPAVGECARCGEPGPHRSFNVQAGGVVCANCRP 183 Query 183 AGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLVER 242 GS +P + L++AL G+W+ + P R SGLVAAHLQWHLERQL++LPLVER Sbjct 184 PGSASPSGETLRLLAALLHGEWDVVDEIPTGPRREGSGLVAAHLQWHLERQLRSLPLVER 243 >gi|331698248|ref|YP_004334487.1| DNA repair protein recO [Pseudonocardia dioxanivorans CB1190] gi|326952937|gb|AEA26634.1| DNA repair protein recO [Pseudonocardia dioxanivorans CB1190] Length=246 Score = 315 bits (806), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 159/242 (66%), Positives = 187/242 (78%), Gaps = 0/242 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 M LYRD VVLR KLGEADRIVTLLTR HG +RAVAKGVRRTRS++GARLEPF H++VQ Sbjct 1 MGLYRDTGVVLRVQKLGEADRIVTLLTRRHGKLRAVAKGVRRTRSRWGARLEPFNHVDVQ 60 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 + GR+LD+VTQ +VDAF IV DYGRYT GCAILETA+RL EE PA ++ L VG Sbjct 61 CYTGRSLDVVTQAETVDAFGAGIVDDYGRYTAGCAILETADRLVSEEGEPALRVYLLLVG 120 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 A+RA+A +R L+LDA+LLRAM AGWAPA+TECA+CA PGPHRAF +A GG+VC C Sbjct 121 AIRAMAGRERDPSLVLDAFLLRAMSHAGWAPAITECAKCAEPGPHRAFSVAGGGAVCPRC 180 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RP GS P L+ AL GDW+AA+A+ + R SGLVAAHLQWHLERQL++LPLV Sbjct 181 RPPGSVLPSAETFTLLDALLHGDWDAADASAPTTRRDTSGLVAAHLQWHLERQLRSLPLV 240 Query 241 ER 242 ER Sbjct 241 ER 242 >gi|134098078|ref|YP_001103739.1| DNA repair protein RecO [Saccharopolyspora erythraea NRRL 2338] gi|291007463|ref|ZP_06565436.1| DNA repair protein RecO [Saccharopolyspora erythraea NRRL 2338] gi|166221909|sp|A4F9T9.1|RECO_SACEN RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|133910701|emb|CAM00814.1| DNA repair protein RecO [Saccharopolyspora erythraea NRRL 2338] Length=273 Score = 312 bits (799), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 159/259 (62%), Positives = 187/259 (73%), Gaps = 0/259 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 M LYRD AVVLR KLGEADRI+TLLTR +G VRAVAKGVRRT S+FGAR+EPF HI+VQ Sbjct 1 MSLYRDSAVVLRVQKLGEADRIITLLTRRYGKVRAVAKGVRRTTSRFGARVEPFCHIDVQ 60 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 L+ GR LD++TQV ++DAF IV DY RYT CA+LET +RLA EE P L+ L G Sbjct 61 LYTGRTLDVITQVQTLDAFGAHIVDDYQRYTSACAVLETVDRLAAEEGEPVLRLYLLATG 120 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRA+A +R L+LDA+LLRAM AGWAPAL ECARC GPH AF++A GG+VCA C Sbjct 121 ALRALAGRERDSSLVLDAFLLRAMSFAGWAPALDECARCNARGPHAAFNVAAGGAVCAEC 180 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RPAGS P + L+ AL GDW AEAA R SGL+AAHLQWH+ERQL++LPLV Sbjct 181 RPAGSVRPSAATLPLLEALLHGDWAVAEAATTPVRREGSGLIAAHLQWHMERQLRSLPLV 240 Query 241 ERFYQADRSVAERRAALIG 259 ER + RAA +G Sbjct 241 ERSEWKVPEIIRERAAELG 259 >gi|324998272|ref|ZP_08119384.1| DNA repair protein RecO [Pseudonocardia sp. P1] Length=266 Score = 310 bits (794), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 154/241 (64%), Positives = 184/241 (77%), Gaps = 0/241 (0%) Query 2 RLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQL 61 +LYRD VVLR KLGEADRIVT+LT+ G +R VAKGVRRTRS++GARLEPF H++VQ Sbjct 3 QLYRDTGVVLRVQKLGEADRIVTMLTKQRGKIRVVAKGVRRTRSRWGARLEPFNHVDVQC 62 Query 62 HPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVGA 121 + GR LD+VTQ +VDAFA +VAD+ Y+CGCAILETA+RL EE PA ++ L +GA Sbjct 63 YTGRTLDVVTQAQTVDAFAPAVVADWSAYSCGCAILETADRLVSEEGEPALRVYLLLLGA 122 Query 122 LRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHCR 181 RA+ADG R L+LDA+LLRAM AGWAP+L+ECARCATPGPHRAF +A GG VC CR Sbjct 123 TRALADGVREPALVLDAFLLRAMSHAGWAPSLSECARCATPGPHRAFTVAGGGMVCPRCR 182 Query 182 PAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLVE 241 P GS TP V L+ AL GDW A+A+ R SGLVAAHLQWHLERQL++LPLV+ Sbjct 183 PPGSVTPATETVSLLEALLHGDWATADASATPNRREASGLVAAHLQWHLERQLRSLPLVD 242 Query 242 R 242 R Sbjct 243 R 243 >gi|257055406|ref|YP_003133238.1| DNA repair protein RecO [Saccharomonospora viridis DSM 43017] gi|256585278|gb|ACU96411.1| DNA replication and repair protein RecO [Saccharomonospora viridis DSM 43017] Length=283 Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 157/242 (65%), Positives = 185/242 (77%), Gaps = 0/242 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 M LYRD VVLR HKLGEADRI+TLLTR HG VRAVAKGVRRT S+FGARLEPF H++VQ Sbjct 1 MSLYRDTGVVLRGHKLGEADRIITLLTRRHGKVRAVAKGVRRTTSRFGARLEPFGHVDVQ 60 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 + GR LD++TQV +VDAFA IV DY RYT AI ETA+RL EE PA L+ L VG Sbjct 61 FYTGRTLDVITQVETVDAFALPIVGDYQRYTAASAITETADRLTAEEGQPALKLYLLVVG 120 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRA+A+G+R L+LDA+LLR+M AGWAPA+TECARC PGPH AF++ GGS+C+ C Sbjct 121 ALRALAEGRRDASLVLDAFLLRSMAFAGWAPAITECARCGQPGPHGAFNVQAGGSLCSRC 180 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 R GS P V+ L++AL GDWE AE++ R VSGLVAAHLQWHLERQL++LP V Sbjct 181 RVPGSVHPSPEVLVLLAALLHGDWETAESSAYGVRRDVSGLVAAHLQWHLERQLRSLPFV 240 Query 241 ER 242 ER Sbjct 241 ER 242 >gi|300788452|ref|YP_003768743.1| DNA repair protein RecO [Amycolatopsis mediterranei U32] gi|299797966|gb|ADJ48341.1| DNA repair protein RecO [Amycolatopsis mediterranei U32] gi|340530056|gb|AEK45261.1| DNA repair protein RecO [Amycolatopsis mediterranei S699] Length=292 Score = 307 bits (787), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 156/242 (65%), Positives = 179/242 (74%), Gaps = 0/242 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 + LYRD VVLR HKLGEADRIVTLLTR HG VRAVAKGVRRT S+FGARLEPF H++VQ Sbjct 2 VNLYRDTGVVLRTHKLGEADRIVTLLTRRHGKVRAVAKGVRRTSSRFGARLEPFGHVDVQ 61 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 + GR LD++TQV +VDAF +VADY YT AI ETA+RL+ EE P L+ L VG Sbjct 62 FYTGRTLDVITQVETVDAFQLPLVADYQSYTAASAIAETADRLSAEEGEPVLKLYLLVVG 121 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRA+ADG R L+LDA+ LRAM AGWAPALTECARC PGPH AF +A GGS+C C Sbjct 122 ALRALADGTRDSSLVLDAFFLRAMSYAGWAPALTECARCGLPGPHTAFSVAAGGSMCQDC 181 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 R AG P V+ L++AL G+W AEA R SGLVAAHLQWHLERQL++LPLV Sbjct 182 RIAGCVHPAPEVLALLTALLHGEWPLAEATLPGTRRDASGLVAAHLQWHLERQLRSLPLV 241 Query 241 ER 242 ER Sbjct 242 ER 243 >gi|317508571|ref|ZP_07966232.1| recombination protein O [Segniliparus rugosus ATCC BAA-974] gi|316253115|gb|EFV12524.1| recombination protein O [Segniliparus rugosus ATCC BAA-974] Length=247 Score = 306 bits (784), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 160/247 (65%), Positives = 190/247 (77%), Gaps = 0/247 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 M+ YRD VVLR H+LGEADRIV LLTR+HGLVRAVAKGVRRTRSKFGARLEPF+ ++VQ Sbjct 1 MKSYRDVGVVLRNHQLGEADRIVALLTREHGLVRAVAKGVRRTRSKFGARLEPFSCVDVQ 60 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 L+ GR+LD++TQ ++DA + +I ADYG+YT GCAILETA LAG + APA LH LT G Sbjct 61 LYQGRSLDVITQAATLDANSEEITADYGKYTTGCAILETATLLAGPQGAPAGQLHTLTRG 120 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 AL A+ G++PRDL+L A+ LRAMG AGW PAL +CARC GPHRAFH GG VC C Sbjct 121 ALAALRKGEKPRDLILAAFFLRAMGHAGWMPALADCARCGKEGPHRAFHPRAGGVVCPLC 180 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RP GS+TP LGV DLM+AL +G W+ A AA +AR+ SGL AAHLQ HLE QL+TL LV Sbjct 181 RPPGSSTPGLGVFDLMAALAEGRWDDAAAASTAARAQASGLTAAHLQCHLEYQLRTLSLV 240 Query 241 ERFYQAD 247 E +A Sbjct 241 EGLAEAS 247 >gi|258652079|ref|YP_003201235.1| DNA repair protein RecO [Nakamurella multipartita DSM 44233] gi|258555304|gb|ACV78246.1| DNA repair protein RecO [Nakamurella multipartita DSM 44233] Length=248 Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 149/244 (62%), Positives = 182/244 (75%), Gaps = 2/244 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 M +YRD AVVLR KLGEADRIV+LLTR G VRAVAKGVRRT+SKFG RLEPF+H+++Q Sbjct 1 MPVYRDSAVVLRVTKLGEADRIVSLLTRRTGKVRAVAKGVRRTKSKFGGRLEPFSHVDLQ 60 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 L+ GRNLDIVTQ ++D F + ADY RYTC AI ETAERL EER P+ L+ L V Sbjct 61 LYAGRNLDIVTQAETLDPFGATLAADYSRYTCATAIAETAERLTAEEREPSLRLYLLVVS 120 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALRA+ + R L+LDA+LLRAM +AGWAPAL ECARC +PGPH AFH+ +GG++C C Sbjct 121 ALRALTESGRGPSLILDAFLLRAMVLAGWAPALRECARCGSPGPHSAFHVPSGGALCPDC 180 Query 181 R--PAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLP 238 R +GS P +DLM+AL DG W A+A+ S + SGLVAA LQWHLER L++LP Sbjct 181 RSGSSGSVRPAPATIDLMAALTDGVWAVADASAVSHQREASGLVAALLQWHLERGLRSLP 240 Query 239 LVER 242 +V+R Sbjct 241 MVDR 244 >gi|291299550|ref|YP_003510828.1| DNA repair protein RecO [Stackebrandtia nassauensis DSM 44728] gi|290568770|gb|ADD41735.1| DNA repair protein RecO [Stackebrandtia nassauensis DSM 44728] Length=251 Score = 294 bits (752), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 144/241 (60%), Positives = 174/241 (73%), Gaps = 0/241 (0%) Query 2 RLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQL 61 + +RD AVVLR HKLGEAD IV++L R+ G +RAVAKGVRRT SKFGARL PF HI+VQL Sbjct 4 KFFRDDAVVLRVHKLGEADHIVSMLGRNSGRMRAVAKGVRRTSSKFGARLAPFGHIDVQL 63 Query 62 HPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVGA 121 GRNL VTQVV +D + +IV DY YT CAI ETAERL EE P+ + +LT+GA Sbjct 64 IEGRNLHTVTQVVGIDLYGRNIVRDYQSYTAACAISETAERLTPEEHEPSLRIFQLTLGA 123 Query 122 LRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHCR 181 LRA++D + L+LDAYLLR MG++GWAPALTECA C G HRAF +A GG VC CR Sbjct 124 LRALSDAEHAATLVLDAYLLRTMGVSGWAPALTECALCGAAGEHRAFSVAAGGCVCRSCR 183 Query 182 PAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLVE 241 PAGS P + LM AL GDW +A+A+ S R+ SGL++AHLQWHLE ++TLP V Sbjct 184 PAGSAHPSPAAITLMRALAKGDWRSADASESSVRNEASGLISAHLQWHLEHTMRTLPYVS 243 Query 242 R 242 R Sbjct 244 R 244 >gi|284990196|ref|YP_003408750.1| DNA repair protein RecO [Geodermatophilus obscurus DSM 43160] gi|284063441|gb|ADB74379.1| DNA repair protein RecO [Geodermatophilus obscurus DSM 43160] Length=263 Score = 293 bits (751), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 148/258 (58%), Positives = 183/258 (71%), Gaps = 3/258 (1%) Query 3 LYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQLH 62 LYRD +VLR KLGEADRIVT+LTR HG VRAVAKGVRRT+SKFGARLEPF+H+++Q + Sbjct 8 LYRDEGIVLRTQKLGEADRIVTVLTRRHGKVRAVAKGVRRTKSKFGARLEPFSHVDLQFY 67 Query 63 PGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVGAL 122 GR LDIV+Q S+ A+ IV DY YT G A+LETA+RL EE+ P+ L L +GAL Sbjct 68 TGRTLDIVSQAESIRAYGQSIVTDYPAYTAGTAVLETADRLTAEEKEPSLRLFLLVIGAL 127 Query 123 RAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHCRP 182 RA+++ P L+LDA+LLRAM +AGW PAL CARC GPHR F + GG VC CRP Sbjct 128 RALSERTHPAGLVLDAFLLRAMSVAGWEPALGGCARCGEEGPHRHFSVPAGGMVCPPCRP 187 Query 183 AGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLVER 242 GS P V+L+ AL GDW+AAEA+ + R SGLVAA LQWHLER L++LPLV+R Sbjct 188 TGSAMPNPATVELLDALLTGDWDAAEASQNANRREGSGLVAALLQWHLERGLRSLPLVDR 247 Query 243 FYQADRSVAERRAALIGQ 260 +D + R A L+ + Sbjct 248 ---SDPTAPRRGAGLLSE 262 >gi|296394229|ref|YP_003659113.1| DNA repair protein RecO [Segniliparus rotundus DSM 44985] gi|296181376|gb|ADG98282.1| DNA repair protein RecO [Segniliparus rotundus DSM 44985] Length=247 Score = 283 bits (723), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 154/247 (63%), Positives = 189/247 (77%), Gaps = 0/247 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 M+ YRD VVLR H+LGEADRIV LLTR+HG+VRAVAKGVRRTRSKFGARLEPF+ ++VQ Sbjct 1 MKSYRDVGVVLRNHQLGEADRIVALLTREHGVVRAVAKGVRRTRSKFGARLEPFSCVDVQ 60 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 L+ GR+LD++TQ +++DA + +I ADYG+YT GCAILETA LAG + APA LH LT G Sbjct 61 LYQGRSLDVITQAMTLDANSEEITADYGKYTTGCAILETATLLAGPQGAPAQQLHTLTRG 120 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 AL A+ G++PRDL+L A+ LRAMG AGW PAL +CARC GPHRAF+ GG+VC C Sbjct 121 ALVALRKGEKPRDLILSAFFLRAMGHAGWMPALVDCARCGAQGPHRAFNPRAGGAVCPLC 180 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RP GS TP GV++LMSAL +G W+ A A +AR+ GL AAHLQ H+E QL+TL LV Sbjct 181 RPPGSGTPGPGVLELMSALAEGRWDDAMGAATAARAQAGGLTAAHLQCHMEYQLRTLSLV 240 Query 241 ERFYQAD 247 E +A Sbjct 241 EGLAEAS 247 >gi|72161256|ref|YP_288913.1| DNA repair protein RecO [Thermobifida fusca YX] gi|92087038|sp|Q47RM7.1|RECO_THEFY RecName: Full=DNA repair protein recO; AltName: Full=Recombination protein O gi|71914988|gb|AAZ54890.1| Recombination protein O, RecO [Thermobifida fusca YX] Length=243 Score = 283 bits (723), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 143/242 (60%), Positives = 176/242 (73%), Gaps = 0/242 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 M LYRD +VLR LGEADRIVTLLTR GLVRAV KGVRRTRS+FGARLEPF HI+VQ Sbjct 1 MSLYRDEGIVLRTQDLGEADRIVTLLTRRTGLVRAVGKGVRRTRSRFGARLEPFTHIDVQ 60 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 LH G++LD+VTQV ++ A+ + +V DY RYT G A+LETAE++ E+ PA L G Sbjct 61 LHAGKSLDVVTQVDTLHAYGSVLVTDYPRYTAGVAMLETAEKVVSVEKDPALRQFLLLWG 120 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 LR +A+G L+LDAYLLR++ +AG+APAL ECA C PGPHR F + GG VC+ C Sbjct 121 GLRTLAEGAHDPRLVLDAYLLRSLAVAGYAPALEECAHCGVPGPHREFAVHAGGMVCSLC 180 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RPAGS P V LM AL GDWE+A+A+ + R+ SGLVAA+LQWHLE +++L LV Sbjct 181 RPAGSVKPSPAAVALMVALLRGDWESADASAERDRTECSGLVAAYLQWHLENGVRSLRLV 240 Query 241 ER 242 ER Sbjct 241 ER 242 >gi|334337448|ref|YP_004542600.1| DNA repair protein recO [Isoptericola variabilis 225] gi|334107816|gb|AEG44706.1| DNA repair protein recO [Isoptericola variabilis 225] Length=244 Score = 278 bits (712), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 139/242 (58%), Positives = 174/242 (72%), Gaps = 0/242 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 M LYRD A+VLR KLGEADRIVT LTR+HG VRAV +GVRRT S+FGARLEPF ++VQ Sbjct 1 MPLYRDDAIVLRTQKLGEADRIVTFLTREHGKVRAVGRGVRRTSSRFGARLEPFMAVDVQ 60 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 LH GRNLD VTQV +V +A I ADYG YT G A+LE A+RL E PA + L G Sbjct 61 LHTGRNLDTVTQVETVGPYAGAICADYGLYTAGAAMLEAADRLVAAEHEPAVQQYWLLAG 120 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 +RA+A+ L+LD+YLLRA+ +AGWAP+ T+CARCA PGPHR F +A GG+VC C Sbjct 121 GVRALAERAHSPGLVLDSYLLRALAVAGWAPSFTDCARCAEPGPHRNFSVAQGGAVCGRC 180 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RP GST+P +L++AL GDWE A+ + R SGLVAA+ Q++LER L++L ++ Sbjct 181 RPPGSTSPAPETFELLAALLVGDWEVADGSEARHRREASGLVAAYSQYYLERTLRSLRMI 240 Query 241 ER 242 ER Sbjct 241 ER 242 >gi|163840337|ref|YP_001624742.1| DNA repair protein RecO [Renibacterium salmoninarum ATCC 33209] gi|162953813|gb|ABY23328.1| DNA repair protein [Renibacterium salmoninarum ATCC 33209] Length=251 Score = 278 bits (712), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 136/242 (57%), Positives = 173/242 (72%), Gaps = 0/242 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 +R YRD AVVLR HKLGEADRI+TLLTR+HG +RAVAKG+RRT SKFGARLEPF ++Q Sbjct 9 VRTYRDDAVVLRTHKLGEADRIITLLTREHGQIRAVAKGIRRTSSKFGARLEPFMVADLQ 68 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 L GR+LDIV+Q VS A+ I A Y RYT A+ ETAERL + A A +RL +G Sbjct 69 LISGRSLDIVSQAVSKSAYGEQIAAHYDRYTVATAMAETAERLTDADSESAGAQYRLLIG 128 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 A ++A G+ +L+LD+YLLRA+ AGWAP+ T+CARC PGPH AF A GG+VC C Sbjct 129 AFSSLARGEHAPELILDSYLLRALATAGWAPSFTDCARCGNPGPHTAFSAALGGAVCHDC 188 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RP GS +P ++L+ AL GDW A+ +P + R +GLVA ++QWHLER +++L LV Sbjct 189 RPPGSPSPAAATMELLPALLSGDWSIADISPITNRREAAGLVANYVQWHLERVVRSLQLV 248 Query 241 ER 242 ER Sbjct 249 ER 250 >gi|297559706|ref|YP_003678680.1| DNA repair protein RecO [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296844154|gb|ADH66174.1| DNA repair protein RecO [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length=243 Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 138/242 (58%), Positives = 172/242 (72%), Gaps = 0/242 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 M LYRD VVLR KLGEADRI+TLLTR GLVRAV KGVRRTRS+FGARLEP H+++Q Sbjct 1 MSLYRDEGVVLRNQKLGEADRIITLLTRRTGLVRAVGKGVRRTRSRFGARLEPCTHVDLQ 60 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 LH GR LD++TQ +V A+ +V+DY RYT A+LETAE++ E+ PA L +G Sbjct 61 LHAGRTLDVITQAETVRAYGEAVVSDYSRYTAATAMLETAEKVVSVEKDPALRQFLLLIG 120 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 ALR + +G L+LDAYLLR++ +AG+AP+L ECARC + G HRAF + GG VC C Sbjct 121 ALRTLGEGSHDSRLVLDAYLLRSLAVAGYAPSLAECARCGSRGEHRAFAVHAGGMVCTVC 180 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RP GS P + LMSAL GDWE+A+A+ RS SGLVAA+LQWHLE +++L V Sbjct 181 RPHGSVHPSPDTLRLMSALLGGDWESADASEDRQRSECSGLVAAYLQWHLENGIRSLRHV 240 Query 241 ER 242 ER Sbjct 241 ER 242 >gi|296130029|ref|YP_003637279.1| DNA repair protein RecO [Cellulomonas flavigena DSM 20109] gi|296021844|gb|ADG75080.1| DNA repair protein RecO [Cellulomonas flavigena DSM 20109] Length=243 Score = 276 bits (705), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 142/242 (59%), Positives = 176/242 (73%), Gaps = 0/242 (0%) Query 1 MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQ 60 M LYRD A+VLR HKLGEADRIVTLLTR+HG VRAV KGVRRT S+FG+RLEPF H++VQ Sbjct 1 MNLYRDEAIVLRTHKLGEADRIVTLLTREHGKVRAVGKGVRRTTSRFGSRLEPFMHVDVQ 60 Query 61 LHPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALHRLTVG 120 L GRNLD+VTQV ++ + I DY YT G A+LETAERL ER PA +RL VG Sbjct 61 LSTGRNLDVVTQVETLGPYGRHISEDYALYTVGTAMLETAERLVEAEREPAVQQYRLLVG 120 Query 121 ALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGSVCAHC 180 A+RA+A L+LD+YLLRA+ +AGWAP+ T+CARC PGPH AF A GG+VC C Sbjct 121 AVRALATRAHAPGLVLDSYLLRALAVAGWAPSFTDCARCGEPGPHHAFAPAVGGAVCLTC 180 Query 181 RPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLKTLPLV 240 RP G+ P L++AL GDWE A+A+ + R+ +GLVA Q+HLER+L++LP+V Sbjct 181 RPPGAAAPAPETFALLAALLSGDWEVADASAERHRAEGNGLVAVFCQFHLERRLRSLPMV 240 Query 241 ER 242 ER Sbjct 241 ER 242 >gi|330469589|ref|YP_004407332.1| DNA repair protein reco [Verrucosispora maris AB-18-032] gi|328812560|gb|AEB46732.1| DNA repair protein reco [Verrucosispora maris AB-18-032] Length=270 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 150/258 (59%), Positives = 177/258 (69%), Gaps = 6/258 (2%) Query 2 RLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIEVQL 61 +LYRD AVVLR KLGE+DRIVTLLTR HG +RAVA+GVRRT SKFGARLEPF H+++QL Sbjct 7 QLYRDDAVVLRVQKLGESDRIVTLLTRRHGRLRAVARGVRRTTSKFGARLEPFGHVDLQL 66 Query 62 ------HPGRNLDIVTQVVSVDAFATDIVADYGRYTCGCAILETAERLAGEERAPAPALH 115 G +L V+QV +D + + DY RYT AI ETAERL ER P+ L Sbjct 67 AGDPKGELGSSLHTVSQVEGIDLYGKRFLGDYPRYTAASAIAETAERLTPVEREPSLRLF 126 Query 116 RLTVGALRAVADGQRPRDLLLDAYLLRAMGIAGWAPALTECARCATPGPHRAFHIATGGS 175 +LT+GALRA+A G+ L+LDAYLLR M +AGWAPALT CA C TPG HRAF + GG+ Sbjct 127 QLTLGALRALAQGEHAITLVLDAYLLRGMALAGWAPALTACAVCGTPGRHRAFSVPAGGA 186 Query 176 VCAHCRPAGSTTPPLGVVDLMSALYDGDWEAAEAAPQSARSHVSGLVAAHLQWHLERQLK 235 VC CRP G+ P +DLMSAL GDW A A R SGLVAAHLQWHLER L+ Sbjct 187 VCPDCRPPGAAHPAPATIDLMSALVGGDWRVANATDTGVRRECSGLVAAHLQWHLERTLR 246 Query 236 TLPLVERFYQADRSVAER 253 +LPLV+R A +V ER Sbjct 247 SLPLVDRGGPATTAVPER 264 Lambda K H 0.323 0.136 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 401076841216 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40