BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2364c
Length=300
Score E
Sequences producing significant alignments: (Bits) Value
gi|15841876|ref|NP_336913.1| GTP-binding protein Era [Mycobacter... 600 7e-170
gi|339295265|gb|AEJ47376.1| GTP-binding protein Era [Mycobacteri... 600 8e-170
gi|118467125|ref|YP_881248.1| GTP-binding protein Era [Mycobacte... 535 3e-150
gi|41408243|ref|NP_961079.1| GTP-binding protein Era [Mycobacter... 534 7e-150
gi|254774754|ref|ZP_05216270.1| GTP-binding protein Era [Mycobac... 533 2e-149
gi|342857493|ref|ZP_08714149.1| GTPase Era [Mycobacterium colomb... 531 5e-149
gi|183983654|ref|YP_001851945.1| GTP-binding protein Era [Mycoba... 530 2e-148
gi|118618892|ref|YP_907224.1| GTP-binding protein Era [Mycobacte... 528 5e-148
gi|254819385|ref|ZP_05224386.1| GTP-binding protein Era [Mycobac... 525 4e-147
gi|240172991|ref|ZP_04751649.1| GTP-binding protein Era [Mycobac... 518 6e-145
gi|126436041|ref|YP_001071732.1| GTP-binding protein Era [Mycoba... 514 7e-144
gi|108800418|ref|YP_640615.1| GTP-binding protein Era [Mycobacte... 513 2e-143
gi|118473995|ref|YP_888765.1| GTP-binding protein Era [Mycobacte... 506 2e-141
gi|296166310|ref|ZP_06848747.1| GTP-binding protein Era [Mycobac... 505 4e-141
gi|333990197|ref|YP_004522811.1| GTP-binding protein Era [Mycoba... 503 1e-140
gi|15827260|ref|NP_301523.1| GTP-binding protein Era [Mycobacter... 491 5e-137
gi|13959677|sp|Q49768.2|ERA_MYCLE RecName: Full=GTPase Era 491 8e-137
gi|120404786|ref|YP_954615.1| GTP-binding protein Era [Mycobacte... 485 4e-135
gi|145223297|ref|YP_001133975.1| GTP-binding protein Era [Mycoba... 484 6e-135
gi|169628762|ref|YP_001702411.1| GTP-binding protein Era [Mycoba... 479 2e-133
gi|336441034|gb|AEI54742.1| GTP-binding protein Era [Mycobacteri... 478 4e-133
gi|336441028|gb|AEI54739.1| GTP-binding protein Era [Mycobacteri... 478 5e-133
gi|336441030|gb|AEI54740.1| GTP-binding protein Era [Mycobacteri... 478 7e-133
gi|336441032|gb|AEI54741.1| GTP-binding protein Era [Mycobacteri... 477 1e-132
gi|336441026|gb|AEI54738.1| GTP-binding protein Era [Mycobacteri... 476 2e-132
gi|336461692|gb|EGO40555.1| GTP-binding protein Era [Mycobacteri... 473 2e-131
gi|111018248|ref|YP_701220.1| GTP-binding protein Era [Rhodococc... 460 1e-127
gi|226360374|ref|YP_002778152.1| GTP-binding protein Era [Rhodoc... 457 8e-127
gi|54023403|ref|YP_117645.1| GTP-binding protein Era [Nocardia f... 457 1e-126
gi|312140286|ref|YP_004007622.1| gtpase [Rhodococcus equi 103S] ... 456 3e-126
gi|229493118|ref|ZP_04386910.1| GTP-binding protein Era [Rhodoco... 451 9e-125
gi|226307218|ref|YP_002767178.1| GTP-binding protein Era [Rhodoc... 449 2e-124
gi|326381616|ref|ZP_08203310.1| GTPase Era [Gordonia neofelifaec... 443 1e-122
gi|343924053|ref|ZP_08763616.1| GTP-binding protein Era homolog ... 440 1e-121
gi|262203045|ref|YP_003274253.1| GTP-binding protein Era [Gordon... 437 7e-121
gi|333918872|ref|YP_004492453.1| GTP-binding protein [Amycolicic... 432 3e-119
gi|319947868|ref|ZP_08022055.1| GTPase Era [Dietzia cinnamea P4]... 427 7e-118
gi|296130043|ref|YP_003637293.1| GTP-binding protein Era [Cellul... 412 3e-113
gi|256375392|ref|YP_003099052.1| GTP-binding protein Era [Actino... 410 2e-112
gi|134098073|ref|YP_001103734.1| GTP-binding protein Era [Saccha... 407 1e-111
gi|257055404|ref|YP_003133236.1| GTP-binding protein Era [Saccha... 405 5e-111
gi|296140452|ref|YP_003647695.1| GTP-binding protein Era [Tsukam... 405 5e-111
gi|300788458|ref|YP_003768749.1| GTP-binding protein Era [Amycol... 405 5e-111
gi|296091932|gb|ADG87884.1| GTP-binding protein Era [Thermobispo... 405 6e-111
gi|345462088|ref|YP_003651777.2| GTP-binding protein Era [Thermo... 404 6e-111
gi|302528834|ref|ZP_07281176.1| GTP-binding protein Era [Strepto... 402 5e-110
gi|254232506|ref|ZP_04925833.1| GTP-binding protein era [Mycobac... 398 5e-109
gi|260903862|ref|ZP_05912184.1| GTP-binding protein Era [Breviba... 397 1e-108
gi|311742993|ref|ZP_07716801.1| GTP-binding protein Era [Aeromic... 396 2e-108
gi|324998271|ref|ZP_08119383.1| GTPase Era [Pseudonocardia sp. P1] 394 7e-108
>gi|15841876|ref|NP_336913.1| GTP-binding protein Era [Mycobacterium tuberculosis CDC1551]
gi|31793541|ref|NP_856034.1| GTP-binding protein Era [Mycobacterium bovis AF2122/97]
gi|57116977|ref|YP_177873.1| GTP-binding protein Era [Mycobacterium tuberculosis H37Rv]
81 more sequence titles
Length=300
Score = 600 bits (1548), Expect = 7e-170, Method: Compositional matrix adjust.
Identities = 300/300 (100%), Positives = 300/300 (100%), Gaps = 0/300 (0%)
Query 1 MTEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVD 60
MTEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVD
Sbjct 1 MTEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVD 60
Query 61 TPGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTL 120
TPGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTL
Sbjct 61 TPGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTL 120
Query 121 VVIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAY 180
VVIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAY
Sbjct 121 VVIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAY 180
Query 181 YPDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALYV 240
YPDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALYV
Sbjct 181 YPDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALYV 240
Query 241 ERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLGF 300
ERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLGF
Sbjct 241 ERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLGF 300
>gi|339295265|gb|AEJ47376.1| GTP-binding protein Era [Mycobacterium tuberculosis CCDC5079]
gi|339298885|gb|AEJ50995.1| GTP-binding protein Era [Mycobacterium tuberculosis CCDC5180]
Length=309
Score = 600 bits (1547), Expect = 8e-170, Method: Compositional matrix adjust.
Identities = 300/300 (100%), Positives = 300/300 (100%), Gaps = 0/300 (0%)
Query 1 MTEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVD 60
MTEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVD
Sbjct 10 MTEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVD 69
Query 61 TPGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTL 120
TPGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTL
Sbjct 70 TPGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTL 129
Query 121 VVIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAY 180
VVIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAY
Sbjct 130 VVIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAY 189
Query 181 YPDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALYV 240
YPDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALYV
Sbjct 190 YPDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALYV 249
Query 241 ERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLGF 300
ERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLGF
Sbjct 250 ERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLGF 309
>gi|118467125|ref|YP_881248.1| GTP-binding protein Era [Mycobacterium avium 104]
gi|189037653|sp|A0QEB0.1|ERA_MYCA1 RecName: Full=GTPase Era
gi|118168412|gb|ABK69309.1| GTP-binding protein Era [Mycobacterium avium 104]
Length=299
Score = 535 bits (1379), Expect = 3e-150, Method: Compositional matrix adjust.
Identities = 267/300 (89%), Positives = 282/300 (94%), Gaps = 1/300 (0%)
Query 1 MTEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVD 60
MTEF SGFVCLVGRPNTGKSTLTNALVG KVAITS RPQTTRH IRGIVH DDFQIILVD
Sbjct 1 MTEFRSGFVCLVGRPNTGKSTLTNALVGTKVAITSMRPQTTRHTIRGIVHRDDFQIILVD 60
Query 61 TPGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTL 120
TPGLHRPRTLLGKRLNDLVR+TYA VDVIGLCIPADEAIGPGDRWIVEQ+R+T P TTL
Sbjct 61 TPGLHRPRTLLGKRLNDLVRDTYAEVDVIGLCIPADEAIGPGDRWIVEQIRATAP-KTTL 119
Query 121 VVIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAY 180
V IVTKIDKVPK++V AQLVAVSELV ++AEIVPVSA+TG +VD++IDVLAAALP GPAY
Sbjct 120 VAIVTKIDKVPKDRVAAQLVAVSELVGDSAEIVPVSAVTGAQVDIVIDVLAAALPPGPAY 179
Query 181 YPDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALYV 240
YPDGELTDEPEEVLMAELIREAAL+GVRDELPHSLAVVIDEV+PRE RDDLIDVHA LYV
Sbjct 180 YPDGELTDEPEEVLMAELIREAALEGVRDELPHSLAVVIDEVNPREDRDDLIDVHALLYV 239
Query 241 ERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLGF 300
ERDSQKGI+IGKGGARLREVGTAAR+QIE LLGTKVYLDLRVKVAKNWQ DPKQLGRLGF
Sbjct 240 ERDSQKGIIIGKGGARLREVGTAARAQIEKLLGTKVYLDLRVKVAKNWQSDPKQLGRLGF 299
>gi|41408243|ref|NP_961079.1| GTP-binding protein Era [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|81831734|sp|Q73Y13.1|ERA_MYCPA RecName: Full=GTPase Era
gi|41396598|gb|AAS04462.1| Bex [Mycobacterium avium subsp. paratuberculosis K-10]
Length=299
Score = 534 bits (1375), Expect = 7e-150, Method: Compositional matrix adjust.
Identities = 266/300 (89%), Positives = 282/300 (94%), Gaps = 1/300 (0%)
Query 1 MTEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVD 60
MTEF SGFVCLVGRPNTGKSTLTNALVG KVAITS RPQTTRH IRGIVH +DFQIILVD
Sbjct 1 MTEFRSGFVCLVGRPNTGKSTLTNALVGTKVAITSMRPQTTRHTIRGIVHREDFQIILVD 60
Query 61 TPGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTL 120
TPGLHRPRTLLGKRLNDLVR+TYA VDVIGLCIPADEAIGPGDRWIVEQ+R+T P TTL
Sbjct 61 TPGLHRPRTLLGKRLNDLVRDTYAEVDVIGLCIPADEAIGPGDRWIVEQIRATAP-KTTL 119
Query 121 VVIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAY 180
V IVTKIDKVPK++V AQLVAVSELV ++AEIVPVSA+TG +VD++IDVLAAALP GPAY
Sbjct 120 VAIVTKIDKVPKDRVAAQLVAVSELVGDSAEIVPVSAVTGAQVDIVIDVLAAALPPGPAY 179
Query 181 YPDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALYV 240
YPDGELTDEPEEVLMAELIREAAL+GVRDELPHSLAVVIDEV+PRE RDDLIDVHA LYV
Sbjct 180 YPDGELTDEPEEVLMAELIREAALEGVRDELPHSLAVVIDEVNPREDRDDLIDVHALLYV 239
Query 241 ERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLGF 300
ERDSQKGI+IGKGGARLREVGTAAR+QIE LLGTKVYLDLRVKVAKNWQ DPKQLGRLGF
Sbjct 240 ERDSQKGIIIGKGGARLREVGTAARAQIEKLLGTKVYLDLRVKVAKNWQSDPKQLGRLGF 299
>gi|254774754|ref|ZP_05216270.1| GTP-binding protein Era [Mycobacterium avium subsp. avium ATCC
25291]
Length=299
Score = 533 bits (1372), Expect = 2e-149, Method: Compositional matrix adjust.
Identities = 266/300 (89%), Positives = 281/300 (94%), Gaps = 1/300 (0%)
Query 1 MTEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVD 60
MTEF SGFVCLVGRPNTGKSTLTNALVG KVAITS RPQTTRH IRGIVH +DFQIILVD
Sbjct 1 MTEFRSGFVCLVGRPNTGKSTLTNALVGTKVAITSMRPQTTRHTIRGIVHREDFQIILVD 60
Query 61 TPGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTL 120
TPGLHRPRTLLGKRLNDLVR+TYA VDVIGLCIPADEAIGPGDRWIVEQ+R+T P TTL
Sbjct 61 TPGLHRPRTLLGKRLNDLVRDTYAEVDVIGLCIPADEAIGPGDRWIVEQIRATAP-KTTL 119
Query 121 VVIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAY 180
V IVTKIDKVPK++V AQLVAVSELV + AEIVPVSA+TG +VD++IDVLAAALP GPAY
Sbjct 120 VAIVTKIDKVPKDRVAAQLVAVSELVGDGAEIVPVSAVTGAQVDIVIDVLAAALPPGPAY 179
Query 181 YPDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALYV 240
YPDGELTDEPEEVLMAELIREAAL+GVRDELPHSLAVVIDEV+PRE RDDLIDVHA LYV
Sbjct 180 YPDGELTDEPEEVLMAELIREAALEGVRDELPHSLAVVIDEVNPREDRDDLIDVHALLYV 239
Query 241 ERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLGF 300
ERDSQKGI+IGKGGARLREVGTAAR+QIE LLGTKVYLDLRVKVAKNWQ DPKQLGRLGF
Sbjct 240 ERDSQKGIIIGKGGARLREVGTAARAQIEKLLGTKVYLDLRVKVAKNWQSDPKQLGRLGF 299
>gi|342857493|ref|ZP_08714149.1| GTPase Era [Mycobacterium colombiense CECT 3035]
gi|342134826|gb|EGT87992.1| GTPase Era [Mycobacterium colombiense CECT 3035]
Length=299
Score = 531 bits (1368), Expect = 5e-149, Method: Compositional matrix adjust.
Identities = 263/300 (88%), Positives = 281/300 (94%), Gaps = 1/300 (0%)
Query 1 MTEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVD 60
MTEF SGFVCLVGRPNTGKSTLTNALVG KVAITS RPQTTRH IRGIVH DDFQIILVD
Sbjct 1 MTEFRSGFVCLVGRPNTGKSTLTNALVGTKVAITSMRPQTTRHTIRGIVHRDDFQIILVD 60
Query 61 TPGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTL 120
TPGLHRPRTLLGKRLNDLVR+TY+ VDVIGLCIPADEAIGPGDRWIVEQ+R+T P TTL
Sbjct 61 TPGLHRPRTLLGKRLNDLVRDTYSEVDVIGLCIPADEAIGPGDRWIVEQIRATAP-KTTL 119
Query 121 VVIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAY 180
V IVTKIDK P+++V AQLVAVSELV ++AEIVPVSA+TG +VD+LI+VLAAALP GPAY
Sbjct 120 VAIVTKIDKTPRDRVAAQLVAVSELVGDSAEIVPVSAVTGAQVDILIEVLAAALPPGPAY 179
Query 181 YPDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALYV 240
YPDGELTDEPEEVLMAELIREAAL+GVRDELPHSLAVVIDEV+PRE RDDL+DVHA LYV
Sbjct 180 YPDGELTDEPEEVLMAELIREAALEGVRDELPHSLAVVIDEVTPREDRDDLVDVHALLYV 239
Query 241 ERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLGF 300
ERDSQKGIVIGKGGARLREVGTAAR+QIE LLGTK+YLDLRVKVAKNWQ DPKQLGRLGF
Sbjct 240 ERDSQKGIVIGKGGARLREVGTAARAQIEKLLGTKIYLDLRVKVAKNWQSDPKQLGRLGF 299
>gi|183983654|ref|YP_001851945.1| GTP-binding protein Era [Mycobacterium marinum M]
gi|183176980|gb|ACC42090.1| GTP-binding protein Era [Mycobacterium marinum M]
Length=300
Score = 530 bits (1364), Expect = 2e-148, Method: Compositional matrix adjust.
Identities = 260/299 (87%), Positives = 279/299 (94%), Gaps = 1/299 (0%)
Query 2 TEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDT 61
+EFHSGFVCLVGRPNTGKSTLTNALVG KVAITS RPQTTRH IRGIVH + FQIILVDT
Sbjct 3 SEFHSGFVCLVGRPNTGKSTLTNALVGTKVAITSMRPQTTRHTIRGIVHRESFQIILVDT 62
Query 62 PGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLV 121
PGLHRPRTLLGKRLNDLVR+TY+ VDVIGLCIPADE+IGPGDRWI+EQ+ +T P LV
Sbjct 63 PGLHRPRTLLGKRLNDLVRDTYSEVDVIGLCIPADESIGPGDRWIIEQIAATAP-KVKLV 121
Query 122 VIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAYY 181
VIVTKIDKVPK++V AQLVAVSELVTN+AEIVPVSA+TG +V++LIDVLA LP GPAYY
Sbjct 122 VIVTKIDKVPKDQVAAQLVAVSELVTNSAEIVPVSAVTGAQVEVLIDVLARTLPQGPAYY 181
Query 182 PDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALYVE 241
PDGELTDEPEEVLMAELIREAAL+GV DELPHSLAVVIDEVSPREGR+DLIDVHA LYVE
Sbjct 182 PDGELTDEPEEVLMAELIREAALEGVHDELPHSLAVVIDEVSPREGREDLIDVHAVLYVE 241
Query 242 RDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLGF 300
RDSQKGI+IGKGGARLREVGTAARSQIE LLGTK+YLDLRVKVAKNWQRDPKQLGRLGF
Sbjct 242 RDSQKGIIIGKGGARLREVGTAARSQIEKLLGTKIYLDLRVKVAKNWQRDPKQLGRLGF 300
>gi|118618892|ref|YP_907224.1| GTP-binding protein Era [Mycobacterium ulcerans Agy99]
gi|118571002|gb|ABL05753.1| GTP-binding protein Era [Mycobacterium ulcerans Agy99]
Length=300
Score = 528 bits (1360), Expect = 5e-148, Method: Compositional matrix adjust.
Identities = 259/299 (87%), Positives = 278/299 (93%), Gaps = 1/299 (0%)
Query 2 TEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDT 61
+EFHSGFVCLVGRPNTGKSTLTNALVG KVAITS RPQTTRH IRGIVH + FQIILVDT
Sbjct 3 SEFHSGFVCLVGRPNTGKSTLTNALVGTKVAITSMRPQTTRHTIRGIVHRESFQIILVDT 62
Query 62 PGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLV 121
PGLHRPRTLLGKRLNDLVR+TY+ VDVIGLCIPADE+IGPGDRWI+EQ+ +T P LV
Sbjct 63 PGLHRPRTLLGKRLNDLVRDTYSEVDVIGLCIPADESIGPGDRWIIEQIAATAP-KVKLV 121
Query 122 VIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAYY 181
VIVTKIDKVPK++V AQLVAVSELVTN+AEIVPVSA+TG +V++LIDVLA LP GPAYY
Sbjct 122 VIVTKIDKVPKDQVAAQLVAVSELVTNSAEIVPVSAVTGAQVEVLIDVLARTLPQGPAYY 181
Query 182 PDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALYVE 241
PDGELTDEPEEVLMAELIREA L+GV DELPHSLAVVIDEVSPREGR+DLIDVHA LYVE
Sbjct 182 PDGELTDEPEEVLMAELIREATLEGVHDELPHSLAVVIDEVSPREGREDLIDVHAVLYVE 241
Query 242 RDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLGF 300
RDSQKGI+IGKGGARLREVGTAARSQIE LLGTK+YLDLRVKVAKNWQRDPKQLGRLGF
Sbjct 242 RDSQKGIIIGKGGARLREVGTAARSQIEKLLGTKIYLDLRVKVAKNWQRDPKQLGRLGF 300
>gi|254819385|ref|ZP_05224386.1| GTP-binding protein Era [Mycobacterium intracellulare ATCC 13950]
Length=299
Score = 525 bits (1352), Expect = 4e-147, Method: Compositional matrix adjust.
Identities = 262/300 (88%), Positives = 276/300 (92%), Gaps = 1/300 (0%)
Query 1 MTEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVD 60
MTEF SGFVCLVGRPNTGKSTLTNALVG KVAITS RPQTTRH IRGIVH DDFQIILVD
Sbjct 1 MTEFRSGFVCLVGRPNTGKSTLTNALVGTKVAITSKRPQTTRHTIRGIVHRDDFQIILVD 60
Query 61 TPGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTL 120
TPGLHRPRTLLGKRLNDLVR+TYA VDVIGLCIPADEAIGPGDRWIVEQ+R+T P TL
Sbjct 61 TPGLHRPRTLLGKRLNDLVRDTYAEVDVIGLCIPADEAIGPGDRWIVEQIRATAP-KATL 119
Query 121 VVIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAY 180
V IVTKIDK PK++V AQLVAVS LV AEIVPVSA+ G ++D+LIDVLAAALP GPAY
Sbjct 120 VAIVTKIDKAPKDRVAAQLVAVSALVGEQAEIVPVSAVAGTQMDVLIDVLAAALPPGPAY 179
Query 181 YPDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALYV 240
YPDGELTDEPEEVLMAELIREAAL+GVRDELPHSLAVVIDEV+PRE RDDLIDVHA LYV
Sbjct 180 YPDGELTDEPEEVLMAELIREAALEGVRDELPHSLAVVIDEVNPREDRDDLIDVHALLYV 239
Query 241 ERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLGF 300
ERDSQKGI+IGKGGARLR+VGTAAR+QIE LLGTKVYLDLRVKVAKNWQ DPKQLGRLGF
Sbjct 240 ERDSQKGIIIGKGGARLRDVGTAARAQIEKLLGTKVYLDLRVKVAKNWQSDPKQLGRLGF 299
>gi|240172991|ref|ZP_04751649.1| GTP-binding protein Era [Mycobacterium kansasii ATCC 12478]
Length=303
Score = 518 bits (1333), Expect = 6e-145, Method: Compositional matrix adjust.
Identities = 260/301 (87%), Positives = 276/301 (92%), Gaps = 4/301 (1%)
Query 3 EFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDTP 62
EF SGFVCLVGRPNTGKSTLTNALVGAKVAITS RPQTTRH IRGIVH ++FQIILVDTP
Sbjct 4 EFRSGFVCLVGRPNTGKSTLTNALVGAKVAITSMRPQTTRHTIRGIVHRENFQIILVDTP 63
Query 63 GLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLVV 122
GLHRPRTLLGKRLNDLVR TYA VDVIGLCIPADEAIGPGDRWI+EQ+RS P TTLVV
Sbjct 64 GLHRPRTLLGKRLNDLVRATYAEVDVIGLCIPADEAIGPGDRWILEQIRSVAPG-TTLVV 122
Query 123 IVTKIDKVPKEKVVAQLVAVSELVTN---AAEIVPVSAMTGDRVDLLIDVLAAALPAGPA 179
IVTKIDKVPK++V AQLVAV ELV N + EIVPVSA+TG +VD+L+DVLA ALP GPA
Sbjct 123 IVTKIDKVPKDRVAAQLVAVGELVENLPGSTEIVPVSAVTGAQVDVLVDVLAGALPPGPA 182
Query 180 YYPDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALY 239
YYPDGELTDEPEEVLMAE IREAAL+GV DELPHSLAVVID+VSPR+GRDDLIDVHA +Y
Sbjct 183 YYPDGELTDEPEEVLMAEFIREAALEGVHDELPHSLAVVIDDVSPRDGRDDLIDVHAVVY 242
Query 240 VERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLG 299
VERDSQKGIVIGKGGARLR+VGTAAR QIE LLGTKVYLDLRVKVAKNWQRDPKQLGRLG
Sbjct 243 VERDSQKGIVIGKGGARLRQVGTAARGQIEKLLGTKVYLDLRVKVAKNWQRDPKQLGRLG 302
Query 300 F 300
F
Sbjct 303 F 303
>gi|126436041|ref|YP_001071732.1| GTP-binding protein Era [Mycobacterium sp. JLS]
gi|189037655|sp|A3Q264.1|ERA_MYCSJ RecName: Full=GTPase Era
gi|126235841|gb|ABN99241.1| GTP-binding protein Era [Mycobacterium sp. JLS]
Length=299
Score = 514 bits (1324), Expect = 7e-144, Method: Compositional matrix adjust.
Identities = 255/300 (85%), Positives = 273/300 (91%), Gaps = 1/300 (0%)
Query 1 MTEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVD 60
M+EF SGFVC VGRPNTGKSTLTNALVG KVAITS RPQTTRH IRGIVH D+FQIILVD
Sbjct 1 MSEFRSGFVCFVGRPNTGKSTLTNALVGTKVAITSNRPQTTRHTIRGIVHRDEFQIILVD 60
Query 61 TPGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTL 120
TPGLHRPRTLLG+RLNDLV+ TY+ VDVIGLCIPADEAIGPGDRWI EQ+R+ P TTL
Sbjct 61 TPGLHRPRTLLGQRLNDLVKTTYSEVDVIGLCIPADEAIGPGDRWIHEQIRAVAP-RTTL 119
Query 121 VVIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAY 180
VVIVTKIDKVPK++V AQL+AVSEL+ AEIVPVSA TG+++D+L DVLA LP GPA+
Sbjct 120 VVIVTKIDKVPKDRVAAQLMAVSELIGPDAEIVPVSATTGEQLDVLTDVLAGKLPPGPAF 179
Query 181 YPDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALYV 240
YPDGELTDEPEE LMAELIREAAL+GVRDELPHSLAVVIDEVSPRE RDDLIDVHA LYV
Sbjct 180 YPDGELTDEPEETLMAELIREAALEGVRDELPHSLAVVIDEVSPREDRDDLIDVHAILYV 239
Query 241 ERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLGF 300
ERDSQKGIVIGKGGARLREVGTAAR QIE LLGTKVYLDLRVK+AKNWQRDPKQLGRLGF
Sbjct 240 ERDSQKGIVIGKGGARLREVGTAARLQIEKLLGTKVYLDLRVKIAKNWQRDPKQLGRLGF 299
>gi|108800418|ref|YP_640615.1| GTP-binding protein Era [Mycobacterium sp. MCS]
gi|119869547|ref|YP_939499.1| GTP-binding protein Era [Mycobacterium sp. KMS]
gi|122976748|sp|Q1B6C5.1|ERA_MYCSS RecName: Full=GTPase Era
gi|189037656|sp|A1UIQ1.1|ERA_MYCSK RecName: Full=GTPase Era
gi|108770837|gb|ABG09559.1| GTP-binding protein Era [Mycobacterium sp. MCS]
gi|119695636|gb|ABL92709.1| GTP-binding protein Era [Mycobacterium sp. KMS]
Length=299
Score = 513 bits (1321), Expect = 2e-143, Method: Compositional matrix adjust.
Identities = 255/300 (85%), Positives = 273/300 (91%), Gaps = 1/300 (0%)
Query 1 MTEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVD 60
M+EF SGFVC VGRPNTGKSTLTNALVG KVAITS RPQTTRH IRGIVH D+FQIILVD
Sbjct 1 MSEFRSGFVCFVGRPNTGKSTLTNALVGTKVAITSNRPQTTRHTIRGIVHRDEFQIILVD 60
Query 61 TPGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTL 120
TPGLHRPRTLLG+RLNDLV+ TY+ VDVIGLCIPADEAIGPGDRWI EQ+R+ P TTL
Sbjct 61 TPGLHRPRTLLGQRLNDLVKTTYSEVDVIGLCIPADEAIGPGDRWIHEQIRAVAP-RTTL 119
Query 121 VVIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAY 180
VVIVTKIDKVP+++V AQL+AVSELV AEIVPVSA TG+++D+L DVLA LP GPA+
Sbjct 120 VVIVTKIDKVPRDRVAAQLMAVSELVGPDAEIVPVSATTGEQLDVLTDVLAGKLPPGPAF 179
Query 181 YPDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALYV 240
YPDGELTDEPEE LMAELIREAAL+GVRDELPHSLAVVIDEVSPRE RDDLIDVHA LYV
Sbjct 180 YPDGELTDEPEETLMAELIREAALEGVRDELPHSLAVVIDEVSPREDRDDLIDVHAILYV 239
Query 241 ERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLGF 300
ERDSQKGIVIGKGGARLREVGTAAR QIE LLGTKVYLDLRVK+AKNWQRDPKQLGRLGF
Sbjct 240 ERDSQKGIVIGKGGARLREVGTAARLQIEKLLGTKVYLDLRVKIAKNWQRDPKQLGRLGF 299
>gi|118473995|ref|YP_888765.1| GTP-binding protein Era [Mycobacterium smegmatis str. MC2 155]
gi|118175282|gb|ABK76178.1| GTP-binding protein Era [Mycobacterium smegmatis str. MC2 155]
Length=301
Score = 506 bits (1302), Expect = 2e-141, Method: Compositional matrix adjust.
Identities = 248/300 (83%), Positives = 273/300 (91%), Gaps = 1/300 (0%)
Query 1 MTEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVD 60
+TEF SGFVC VGRPNTGKSTLTNALVG KVAITS RPQTTRH IRGIVH +DFQIILVD
Sbjct 3 LTEFRSGFVCFVGRPNTGKSTLTNALVGQKVAITSNRPQTTRHTIRGIVHREDFQIILVD 62
Query 61 TPGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTL 120
TPGLHRPRTLLG+RLNDLV++TY+ VDVIG+CIPADEAIGPGDRWI +Q+R+ P TTL
Sbjct 63 TPGLHRPRTLLGQRLNDLVKDTYSEVDVIGMCIPADEAIGPGDRWIYQQIRAVAP-RTTL 121
Query 121 VVIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAY 180
+ IVTKIDKVPK++V AQL+AVSEL+ AEIVPVSA +G+++D+L +VL + LP GPAY
Sbjct 122 IGIVTKIDKVPKDRVAAQLLAVSELMGPDAEIVPVSATSGEQLDVLTNVLVSQLPPGPAY 181
Query 181 YPDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALYV 240
YPDGELTDEPEEVLMAELIREAAL+GVRDELPHSLAVVIDEVS RE RDDLIDVHA LYV
Sbjct 182 YPDGELTDEPEEVLMAELIREAALEGVRDELPHSLAVVIDEVSQREDRDDLIDVHAILYV 241
Query 241 ERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLGF 300
ERDSQKGIVIGKGGARLREVGTAAR QIE LLGTKVYLDLRVK+AKNWQRDPKQLG+LGF
Sbjct 242 ERDSQKGIVIGKGGARLREVGTAARKQIEKLLGTKVYLDLRVKIAKNWQRDPKQLGKLGF 301
>gi|296166310|ref|ZP_06848747.1| GTP-binding protein Era [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295898319|gb|EFG77888.1| GTP-binding protein Era [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=305
Score = 505 bits (1300), Expect = 4e-141, Method: Compositional matrix adjust.
Identities = 264/300 (88%), Positives = 280/300 (94%), Gaps = 1/300 (0%)
Query 1 MTEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVD 60
M EF SGFVCLVGRPNTGKSTLTNALVG KVAITSTRPQTTRH IRGIVH ++FQIILVD
Sbjct 7 MREFRSGFVCLVGRPNTGKSTLTNALVGTKVAITSTRPQTTRHTIRGIVHRENFQIILVD 66
Query 61 TPGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTL 120
TPGLHRPRTLLGKRLNDLVR+TY VDVIGLCIPADEAIGPGDRWIV+Q+RST P TTL
Sbjct 67 TPGLHRPRTLLGKRLNDLVRDTYGEVDVIGLCIPADEAIGPGDRWIVDQIRSTAP-KTTL 125
Query 121 VVIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAY 180
V IVTKIDKVP++ V AQLVAVSELV ++AEIVPVSA TG++VD+LIDVLAAALPAGPAY
Sbjct 126 VAIVTKIDKVPRDWVAAQLVAVSELVGDSAEIVPVSAATGEQVDVLIDVLAAALPAGPAY 185
Query 181 YPDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALYV 240
YPDGELTDEPEEVLMAELIREAAL+GVRDELPHSLAVVIDEV+PRE RDDLIDVHA L+V
Sbjct 186 YPDGELTDEPEEVLMAELIREAALEGVRDELPHSLAVVIDEVNPREDRDDLIDVHALLFV 245
Query 241 ERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLGF 300
ERDSQKGIVIGKGGARLR+VGTAAR QIE LLGTKVYLDLRVKVAKNWQ DPKQLGRLGF
Sbjct 246 ERDSQKGIVIGKGGARLRQVGTAARGQIEKLLGTKVYLDLRVKVAKNWQSDPKQLGRLGF 305
>gi|333990197|ref|YP_004522811.1| GTP-binding protein Era [Mycobacterium sp. JDM601]
gi|333486165|gb|AEF35557.1| GTP-binding protein Era [Mycobacterium sp. JDM601]
Length=298
Score = 503 bits (1296), Expect = 1e-140, Method: Compositional matrix adjust.
Identities = 247/300 (83%), Positives = 273/300 (91%), Gaps = 2/300 (0%)
Query 1 MTEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVD 60
M+EFHSGFVC VGRPNTGKSTLTNALVGAKVAITS RPQTTRH IRGIVH +DFQIILVD
Sbjct 1 MSEFHSGFVCFVGRPNTGKSTLTNALVGAKVAITSNRPQTTRHTIRGIVHREDFQIILVD 60
Query 61 TPGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTL 120
TPGLHRPRTLLGKRLN+LV++TYA VDVIGLCIPADEAIGPGDRWI+EQ+R+ P T L
Sbjct 61 TPGLHRPRTLLGKRLNELVKDTYAQVDVIGLCIPADEAIGPGDRWIIEQIRAVAP-KTKL 119
Query 121 VVIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAY 180
+V+VTKIDK ++K+ AQLVAV EL A EIVPVSA++G++VD+LI VLA ALP GPA+
Sbjct 120 LVVVTKIDKTSRDKIAAQLVAVGELAPEA-EIVPVSAVSGEQVDVLIGVLAGALPVGPAF 178
Query 181 YPDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALYV 240
YPDGELTDEPEE LMAE IREAAL+GVRDELPHSLAVVI+EV PRE RDDLI+V+A LYV
Sbjct 179 YPDGELTDEPEETLMAEFIREAALEGVRDELPHSLAVVIEEVRPREDRDDLIEVYAVLYV 238
Query 241 ERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLGF 300
ERDSQKGIVIG+GG+RLREVGTAARSQIE LLGTKV+LDLRVKVAKNWQRDPKQLGRLGF
Sbjct 239 ERDSQKGIVIGRGGSRLREVGTAARSQIEKLLGTKVFLDLRVKVAKNWQRDPKQLGRLGF 298
>gi|15827260|ref|NP_301523.1| GTP-binding protein Era [Mycobacterium leprae TN]
gi|221229738|ref|YP_002503154.1| GTP-binding protein Era [Mycobacterium leprae Br4923]
gi|466988|gb|AAA17174.1| B1937_F3_102 [Mycobacterium leprae]
gi|13092809|emb|CAC30139.1| putative Era-family GTP-binding protein [Mycobacterium leprae]
gi|219932845|emb|CAR70724.1| putative Era-family GTP-binding protein [Mycobacterium leprae
Br4923]
Length=302
Score = 491 bits (1264), Expect = 5e-137, Method: Compositional matrix adjust.
Identities = 245/301 (82%), Positives = 267/301 (89%), Gaps = 2/301 (0%)
Query 1 MTEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSD-DFQIILV 59
M EF SGFVCL+GRPNTGKSTLTNALVG KVAITS +PQTTRH IRGIVH + +FQI+LV
Sbjct 3 MAEFRSGFVCLIGRPNTGKSTLTNALVGTKVAITSMKPQTTRHTIRGIVHREGNFQIVLV 62
Query 60 DTPGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTT 119
DTPGLHRPRTLLGKRLNDLVR+TY VD+IGLCIPADEA GPGDRWIV Q+RS P T
Sbjct 63 DTPGLHRPRTLLGKRLNDLVRDTYTEVDLIGLCIPADEATGPGDRWIVNQIRSVAP-KTI 121
Query 120 LVVIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPA 179
LVVIVTKIDKVPK+++ AQLVAVS+LV ++AEIVPVSA+TG++VD+LIDVLAAALP GPA
Sbjct 122 LVVIVTKIDKVPKDRLSAQLVAVSDLVADSAEIVPVSAVTGEQVDVLIDVLAAALPPGPA 181
Query 180 YYPDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALY 239
YY GELTDEPEE+LMAELIREA L+GV DELPHSLAVVIDEVSPR GR DLIDVHA LY
Sbjct 182 YYSAGELTDEPEELLMAELIREAVLEGVHDELPHSLAVVIDEVSPRAGRGDLIDVHAVLY 241
Query 240 VERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLG 299
VER SQKGIVIGK GARLREVG AAR QIE LLGT +YLDL V VAKNWQR+PKQLGRLG
Sbjct 242 VERPSQKGIVIGKSGARLREVGIAARRQIEKLLGTNIYLDLHVNVAKNWQRNPKQLGRLG 301
Query 300 F 300
F
Sbjct 302 F 302
>gi|13959677|sp|Q49768.2|ERA_MYCLE RecName: Full=GTPase Era
Length=300
Score = 491 bits (1263), Expect = 8e-137, Method: Compositional matrix adjust.
Identities = 245/301 (82%), Positives = 267/301 (89%), Gaps = 2/301 (0%)
Query 1 MTEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSD-DFQIILV 59
M EF SGFVCL+GRPNTGKSTLTNALVG KVAITS +PQTTRH IRGIVH + +FQI+LV
Sbjct 1 MAEFRSGFVCLIGRPNTGKSTLTNALVGTKVAITSMKPQTTRHTIRGIVHREGNFQIVLV 60
Query 60 DTPGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTT 119
DTPGLHRPRTLLGKRLNDLVR+TY VD+IGLCIPADEA GPGDRWIV Q+RS P T
Sbjct 61 DTPGLHRPRTLLGKRLNDLVRDTYTEVDLIGLCIPADEATGPGDRWIVNQIRSVAP-KTI 119
Query 120 LVVIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPA 179
LVVIVTKIDKVPK+++ AQLVAVS+LV ++AEIVPVSA+TG++VD+LIDVLAAALP GPA
Sbjct 120 LVVIVTKIDKVPKDRLSAQLVAVSDLVADSAEIVPVSAVTGEQVDVLIDVLAAALPPGPA 179
Query 180 YYPDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALY 239
YY GELTDEPEE+LMAELIREA L+GV DELPHSLAVVIDEVSPR GR DLIDVHA LY
Sbjct 180 YYSAGELTDEPEELLMAELIREAVLEGVHDELPHSLAVVIDEVSPRAGRGDLIDVHAVLY 239
Query 240 VERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLG 299
VER SQKGIVIGK GARLREVG AAR QIE LLGT +YLDL V VAKNWQR+PKQLGRLG
Sbjct 240 VERPSQKGIVIGKSGARLREVGIAARRQIEKLLGTNIYLDLHVNVAKNWQRNPKQLGRLG 299
Query 300 F 300
F
Sbjct 300 F 300
>gi|120404786|ref|YP_954615.1| GTP-binding protein Era [Mycobacterium vanbaalenii PYR-1]
gi|119957604|gb|ABM14609.1| GTP-binding protein Era [Mycobacterium vanbaalenii PYR-1]
Length=305
Score = 485 bits (1248), Expect = 4e-135, Method: Compositional matrix adjust.
Identities = 242/301 (81%), Positives = 266/301 (89%), Gaps = 4/301 (1%)
Query 3 EFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDTP 62
EF SGFVC VGRPNTGKSTLTNALVG KVAITS RPQTTRH IRGIVH D+FQI+LVDTP
Sbjct 6 EFRSGFVCFVGRPNTGKSTLTNALVGTKVAITSNRPQTTRHTIRGIVHRDEFQIVLVDTP 65
Query 63 GLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLVV 122
GLHRPRTLLG+RLN+LV++TY+ VDVIG+CIPADE IGPGDRWI EQ+R+ P TTL+
Sbjct 66 GLHRPRTLLGQRLNELVKDTYSEVDVIGMCIPADEKIGPGDRWIYEQIRAVAP-RTTLIA 124
Query 123 IVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAYYP 182
IVTKIDKV K++V QL+AVSEL A+IVPVSA +G ++D+LIDVL + LP GPA+YP
Sbjct 125 IVTKIDKVSKDRVGEQLLAVSELFGPDADIVPVSATSGTQLDVLIDVLVSKLPPGPAFYP 184
Query 183 DGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGR---DDLIDVHAALY 239
DGELTDEPEEVLMAELIREAAL+GVRDELPHSLAVVIDEV R GR D LIDVHA LY
Sbjct 185 DGELTDEPEEVLMAELIREAALEGVRDELPHSLAVVIDEVEERPGRPDDDPLIDVHAILY 244
Query 240 VERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLG 299
VERDSQKGIVIGKGGARLREVGTAAR+QIE LLGTKVYLDLRVK+AKNWQRDPKQLGRLG
Sbjct 245 VERDSQKGIVIGKGGARLREVGTAARTQIEKLLGTKVYLDLRVKIAKNWQRDPKQLGRLG 304
Query 300 F 300
F
Sbjct 305 F 305
>gi|145223297|ref|YP_001133975.1| GTP-binding protein Era [Mycobacterium gilvum PYR-GCK]
gi|315443757|ref|YP_004076636.1| GTP-binding protein Era [Mycobacterium sp. Spyr1]
gi|145215783|gb|ABP45187.1| GTP-binding protein Era [Mycobacterium gilvum PYR-GCK]
gi|315262060|gb|ADT98801.1| GTP-binding protein Era [Mycobacterium sp. Spyr1]
Length=304
Score = 484 bits (1246), Expect = 6e-135, Method: Compositional matrix adjust.
Identities = 241/302 (80%), Positives = 266/302 (89%), Gaps = 4/302 (1%)
Query 2 TEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDT 61
+EF SGFVC VGRPNTGKSTLTNALVG KVAITS RPQTTRH IRGIVH DDFQI+LVDT
Sbjct 4 SEFRSGFVCFVGRPNTGKSTLTNALVGTKVAITSNRPQTTRHTIRGIVHRDDFQIVLVDT 63
Query 62 PGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLV 121
PGLHRPRTLLG+RLN+LV++TY+ VDVIG+CIPADE IGPGDRWI EQ+R+ P TTL+
Sbjct 64 PGLHRPRTLLGQRLNELVKDTYSEVDVIGMCIPADEKIGPGDRWIYEQIRAVAP-RTTLI 122
Query 122 VIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAYY 181
IVTKIDKV K++V QL+AVSEL A+IVPVSA +G ++D+L DVL + LP GPA+Y
Sbjct 123 AIVTKIDKVSKDRVGEQLLAVSELFGPDADIVPVSATSGTQLDVLTDVLVSKLPPGPAFY 182
Query 182 PDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGR---DDLIDVHAAL 238
PDGELTDEPEEVLMAELIREAAL+GVRDELPHSLAVVIDEV R GR D LIDVHA L
Sbjct 183 PDGELTDEPEEVLMAELIREAALEGVRDELPHSLAVVIDEVEERPGRPEDDPLIDVHAIL 242
Query 239 YVERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRL 298
YVERDSQKGIVIGKGGARLREVGTAAR+QIE LLGT+VYLDLRVK+AKNWQRDPKQLGRL
Sbjct 243 YVERDSQKGIVIGKGGARLREVGTAARTQIEKLLGTRVYLDLRVKIAKNWQRDPKQLGRL 302
Query 299 GF 300
GF
Sbjct 303 GF 304
>gi|169628762|ref|YP_001702411.1| GTP-binding protein Era [Mycobacterium abscessus ATCC 19977]
gi|169240729|emb|CAM61757.1| GTP-binding protein Era homolog [Mycobacterium abscessus]
gi|336441024|gb|AEI54737.1| GTP-binding protein Era [Mycobacterium abscessus]
Length=304
Score = 479 bits (1234), Expect = 2e-133, Method: Compositional matrix adjust.
Identities = 237/301 (79%), Positives = 265/301 (89%), Gaps = 4/301 (1%)
Query 3 EFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDTP 62
EF SGFVC VGRPNTGKSTLTNALVG KVAITS RPQTTRH IRGIVH ++FQI+LVDTP
Sbjct 5 EFRSGFVCFVGRPNTGKSTLTNALVGQKVAITSNRPQTTRHTIRGIVHRENFQIVLVDTP 64
Query 63 GLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLVV 122
GLHRPRTLLG+RLNDLVR+TY+ VDVIGLCIPADE IGPGD+WI EQ++ P TTL+
Sbjct 65 GLHRPRTLLGQRLNDLVRDTYSEVDVIGLCIPADEGIGPGDKWIYEQIKLVAP-RTTLIA 123
Query 123 IVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAYYP 182
IVTKIDKV KE+V QL++VS+LV +IVPVSA++G +V++L +VLA+ L GPA+YP
Sbjct 124 IVTKIDKVSKERVAEQLLSVSQLVGKEVDIVPVSAVSGAQVEVLTEVLASKLQPGPAFYP 183
Query 183 DGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGR---DDLIDVHAALY 239
DGELTDEPEEVLMAELIREAAL+GVRDELPHSLAVVIDE S REGR +LIDVHA LY
Sbjct 184 DGELTDEPEEVLMAELIREAALEGVRDELPHSLAVVIDECSEREGRPEGSELIDVHAILY 243
Query 240 VERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLG 299
VERDSQKGIVIGKGGARLREVGT AR+QIE LLGTKV+LDLRVKVAKNWQRDPKQLG+LG
Sbjct 244 VERDSQKGIVIGKGGARLREVGTNARTQIEKLLGTKVFLDLRVKVAKNWQRDPKQLGKLG 303
Query 300 F 300
F
Sbjct 304 F 304
>gi|336441034|gb|AEI54742.1| GTP-binding protein Era [Mycobacterium massiliense]
Length=304
Score = 478 bits (1231), Expect = 4e-133, Method: Compositional matrix adjust.
Identities = 237/301 (79%), Positives = 265/301 (89%), Gaps = 4/301 (1%)
Query 3 EFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDTP 62
EF SGFVC VGRPNTGKSTLTNALVG KVAITS RPQTTRH IRGIVH ++FQI+LVDTP
Sbjct 5 EFRSGFVCFVGRPNTGKSTLTNALVGQKVAITSNRPQTTRHTIRGIVHRENFQIVLVDTP 64
Query 63 GLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLVV 122
GLHRPRTLLG+RLNDLVR+TY+ VDVIGLCIPADE IGPGD+WI EQ++ P TTL+
Sbjct 65 GLHRPRTLLGQRLNDLVRDTYSEVDVIGLCIPADEGIGPGDKWIYEQIKLVAP-RTTLIA 123
Query 123 IVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAYYP 182
IVTKIDKV KE+V QL++VS+LV +IVPVSA++G +V++L +VLA+ L GPA+YP
Sbjct 124 IVTKIDKVSKERVAEQLLSVSQLVGPEVDIVPVSAVSGAQVEVLTEVLASKLQPGPAFYP 183
Query 183 DGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGR---DDLIDVHAALY 239
DGELTDEPEEVLMAELIREAAL+GVRDELPHSLAVVIDE S REGR +LIDVHA LY
Sbjct 184 DGELTDEPEEVLMAELIREAALEGVRDELPHSLAVVIDECSEREGRPEGSELIDVHAILY 243
Query 240 VERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLG 299
VERDSQKGIVIGKGGARLREVGT AR+QIE LLGTKV+LDLRVKVAKNWQRDPKQLG+LG
Sbjct 244 VERDSQKGIVIGKGGARLREVGTNARTQIEKLLGTKVFLDLRVKVAKNWQRDPKQLGKLG 303
Query 300 F 300
F
Sbjct 304 F 304
>gi|336441028|gb|AEI54739.1| GTP-binding protein Era [Mycobacterium bolletii]
Length=304
Score = 478 bits (1230), Expect = 5e-133, Method: Compositional matrix adjust.
Identities = 236/301 (79%), Positives = 265/301 (89%), Gaps = 4/301 (1%)
Query 3 EFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDTP 62
EF SGFVC VGRPNTGKSTLTNALVG KVAITS RPQTTRH +RGIVH ++FQI+LVDTP
Sbjct 5 EFRSGFVCFVGRPNTGKSTLTNALVGQKVAITSNRPQTTRHTVRGIVHRENFQIVLVDTP 64
Query 63 GLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLVV 122
GLHRPRTLLG+RLNDLVR+TY+ VDVIGLCIPADE IGPGD+WI EQ++ P TTL+
Sbjct 65 GLHRPRTLLGQRLNDLVRDTYSEVDVIGLCIPADEGIGPGDKWIYEQIKLVAP-RTTLIA 123
Query 123 IVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAYYP 182
IVTKIDKV KE+V QL++VS+LV +IVPVSA++G +V++L +VLA+ L GPA+YP
Sbjct 124 IVTKIDKVSKERVAEQLLSVSQLVGPEVDIVPVSAVSGAQVEVLTEVLASKLQPGPAFYP 183
Query 183 DGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGR---DDLIDVHAALY 239
DGELTDEPEEVLMAELIREAAL+GVRDELPHSLAVVIDE S REGR +LIDVHA LY
Sbjct 184 DGELTDEPEEVLMAELIREAALEGVRDELPHSLAVVIDECSEREGRPEGSELIDVHAILY 243
Query 240 VERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLG 299
VERDSQKGIVIGKGGARLREVGT AR+QIE LLGTKV+LDLRVKVAKNWQRDPKQLG+LG
Sbjct 244 VERDSQKGIVIGKGGARLREVGTNARTQIEKLLGTKVFLDLRVKVAKNWQRDPKQLGKLG 303
Query 300 F 300
F
Sbjct 304 F 304
>gi|336441030|gb|AEI54740.1| GTP-binding protein Era [Mycobacterium chelonae]
Length=304
Score = 478 bits (1229), Expect = 7e-133, Method: Compositional matrix adjust.
Identities = 237/301 (79%), Positives = 265/301 (89%), Gaps = 4/301 (1%)
Query 3 EFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDTP 62
EF SGFVC VGRPNTGKSTLTNALVG KVAITS RPQTTRH IRGIVH ++FQI+LVDTP
Sbjct 5 EFRSGFVCFVGRPNTGKSTLTNALVGQKVAITSNRPQTTRHTIRGIVHRENFQIVLVDTP 64
Query 63 GLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLVV 122
GLHRPRTLLG+RLNDLVR+TY+ VDVIGLCIPADE IGPGD+WI EQ++ P TTL+
Sbjct 65 GLHRPRTLLGQRLNDLVRDTYSEVDVIGLCIPADEGIGPGDKWIYEQIKLVAP-RTTLIA 123
Query 123 IVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAYYP 182
IVTKIDKV KE+V QL++VS+LV +IVPVSA++G +V++L +VLA+ L GPA+YP
Sbjct 124 IVTKIDKVSKERVAEQLLSVSQLVGPDVDIVPVSAVSGAQVEVLTEVLASKLQPGPAFYP 183
Query 183 DGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGR---DDLIDVHAALY 239
DGELTDEPEEVLMAELIREAAL+GVRDELPHSLAVVIDEV+ REGR +LIDVHA LY
Sbjct 184 DGELTDEPEEVLMAELIREAALEGVRDELPHSLAVVIDEVNEREGRPEGSELIDVHAILY 243
Query 240 VERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLG 299
VERDSQKGIVIGKGGARLREVGT AR QIE LLGTKV+LDLRVKVAKNWQRDPKQLG+LG
Sbjct 244 VERDSQKGIVIGKGGARLREVGTNARKQIEKLLGTKVFLDLRVKVAKNWQRDPKQLGKLG 303
Query 300 F 300
F
Sbjct 304 F 304
>gi|336441032|gb|AEI54741.1| GTP-binding protein Era [Mycobacterium immunogenum]
Length=304
Score = 477 bits (1227), Expect = 1e-132, Method: Compositional matrix adjust.
Identities = 236/301 (79%), Positives = 266/301 (89%), Gaps = 4/301 (1%)
Query 3 EFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDTP 62
EF SGFVC VGRPNTGKSTLTNALVG KVAITS RPQTTRH IRGIVH +DFQI+LVDTP
Sbjct 5 EFRSGFVCFVGRPNTGKSTLTNALVGQKVAITSNRPQTTRHTIRGIVHREDFQIVLVDTP 64
Query 63 GLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLVV 122
GLHRPRTLLG+RLNDLVR+TY+ VDVIGLCIPADE IGPGD+WI EQ++ P TTL+
Sbjct 65 GLHRPRTLLGQRLNDLVRDTYSEVDVIGLCIPADEGIGPGDKWIYEQIKLVAP-RTTLIA 123
Query 123 IVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAYYP 182
IVTKIDKV KE+V QL++VS+LV +IVPVSA++G +V++L +VLA+ L GPA+YP
Sbjct 124 IVTKIDKVSKERVAEQLLSVSQLVGPDVDIVPVSAVSGAQVEVLTEVLASKLAPGPAFYP 183
Query 183 DGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGR---DDLIDVHAALY 239
DGELTDEPEEVLMAELIREAAL+GVRDELPHSLAVVIDEV+ REGR +LIDV+A LY
Sbjct 184 DGELTDEPEEVLMAELIREAALEGVRDELPHSLAVVIDEVNEREGRAEGSELIDVYAILY 243
Query 240 VERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLG 299
VERDSQKGIVIGKGG+RLREVGT AR+QIE LLGTKV+LDLRVKVAKNWQRDPKQLG+LG
Sbjct 244 VERDSQKGIVIGKGGSRLREVGTNARTQIEKLLGTKVFLDLRVKVAKNWQRDPKQLGKLG 303
Query 300 F 300
F
Sbjct 304 F 304
>gi|336441026|gb|AEI54738.1| GTP-binding protein Era [Mycobacterium franklinii]
Length=304
Score = 476 bits (1225), Expect = 2e-132, Method: Compositional matrix adjust.
Identities = 237/301 (79%), Positives = 265/301 (89%), Gaps = 4/301 (1%)
Query 3 EFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDTP 62
EF SGFVC VGRPNTGKSTLTNALVG KVAITS RPQTTRH IRGIVH ++FQI+LVDTP
Sbjct 5 EFRSGFVCFVGRPNTGKSTLTNALVGQKVAITSNRPQTTRHTIRGIVHRENFQIVLVDTP 64
Query 63 GLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLVV 122
GLHRPRTLLG+RLNDLVR+TY+ VDVIGLCIPADE IGPGD+WI EQ++ P TTL+
Sbjct 65 GLHRPRTLLGQRLNDLVRDTYSEVDVIGLCIPADEGIGPGDKWIHEQIKLIAP-RTTLIA 123
Query 123 IVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAYYP 182
IVTKIDKV KE+V QL++VSELV +IVPVSA++G +V++L +VLA+ L GPA+YP
Sbjct 124 IVTKIDKVSKERVAEQLLSVSELVGPDVDIVPVSAISGAQVEVLTEVLASKLQPGPAFYP 183
Query 183 DGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGR---DDLIDVHAALY 239
DGELTDEPEEVLMAELIREAAL+GVRDELPHSLAVVIDEV+ REGR +LIDVHA LY
Sbjct 184 DGELTDEPEEVLMAELIREAALEGVRDELPHSLAVVIDEVNEREGRPEGSELIDVHAILY 243
Query 240 VERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLG 299
VERDSQKGIVIGKGG+RLREVGT AR QIE LLGTKV+LDLRVKVAKNWQRDPKQLG+LG
Sbjct 244 VERDSQKGIVIGKGGSRLREVGTNARVQIEKLLGTKVFLDLRVKVAKNWQRDPKQLGKLG 303
Query 300 F 300
F
Sbjct 304 F 304
>gi|336461692|gb|EGO40555.1| GTP-binding protein Era [Mycobacterium avium subsp. paratuberculosis
S397]
Length=268
Score = 473 bits (1217), Expect = 2e-131, Method: Compositional matrix adjust.
Identities = 237/269 (89%), Positives = 253/269 (95%), Gaps = 1/269 (0%)
Query 32 AITSTRPQTTRHAIRGIVHSDDFQIILVDTPGLHRPRTLLGKRLNDLVRETYAAVDVIGL 91
AITS RPQTTRH IRGIVH +DFQIILVDTPGLHRPRTLLGKRLNDLVR+TYA VDVIGL
Sbjct 1 AITSMRPQTTRHTIRGIVHREDFQIILVDTPGLHRPRTLLGKRLNDLVRDTYAEVDVIGL 60
Query 92 CIPADEAIGPGDRWIVEQLRSTGPANTTLVVIVTKIDKVPKEKVVAQLVAVSELVTNAAE 151
CIPADEAIGPGDRWIVEQ+R+T P TTLV IVTKIDKVPK++V AQLVAVSELV ++AE
Sbjct 61 CIPADEAIGPGDRWIVEQIRATAP-KTTLVAIVTKIDKVPKDRVAAQLVAVSELVGDSAE 119
Query 152 IVPVSAMTGDRVDLLIDVLAAALPAGPAYYPDGELTDEPEEVLMAELIREAALQGVRDEL 211
IVPVSA+TG +VD++IDVLAAALP GPAYYPDGELTDEPEEVLMAELIREAAL+GVRDEL
Sbjct 120 IVPVSAVTGAQVDIVIDVLAAALPPGPAYYPDGELTDEPEEVLMAELIREAALEGVRDEL 179
Query 212 PHSLAVVIDEVSPREGRDDLIDVHAALYVERDSQKGIVIGKGGARLREVGTAARSQIENL 271
PHSLAVVIDEV+PRE RDDLIDVHA LYVERDSQKGI+IGKGGARLREVGTAAR+QIE L
Sbjct 180 PHSLAVVIDEVNPREDRDDLIDVHALLYVERDSQKGIIIGKGGARLREVGTAARAQIEKL 239
Query 272 LGTKVYLDLRVKVAKNWQRDPKQLGRLGF 300
LGTKVYLDLRVKVAKNWQ DPKQLGRLGF
Sbjct 240 LGTKVYLDLRVKVAKNWQSDPKQLGRLGF 268
>gi|111018248|ref|YP_701220.1| GTP-binding protein Era [Rhodococcus jostii RHA1]
gi|110817778|gb|ABG93062.1| GTP-binding protein [Rhodococcus jostii RHA1]
Length=305
Score = 460 bits (1184), Expect = 1e-127, Method: Compositional matrix adjust.
Identities = 228/303 (76%), Positives = 263/303 (87%), Gaps = 5/303 (1%)
Query 2 TEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDT 61
TEF SGFVC VGRPNTGKSTLTNALVG+K+AITS+RPQTTRH IRGIVH D Q+ILVDT
Sbjct 4 TEFRSGFVCFVGRPNTGKSTLTNALVGSKIAITSSRPQTTRHTIRGIVHRDHAQLILVDT 63
Query 62 PGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLV 121
PGLHRPRTLLG+RLNDLVR+TY+ VDVI LCIPADE IGPGDRWIV+Q+R P TTL+
Sbjct 64 PGLHRPRTLLGQRLNDLVRDTYSEVDVICLCIPADEKIGPGDRWIVQQVRQIAP-KTTLI 122
Query 122 VIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAYY 181
IVTKIDKV K+ V QL+AVS+L+ A++VPVSA +G++V++L+DVLA+ + GPA+Y
Sbjct 123 GIVTKIDKVSKDMVGQQLLAVSKLLGPEADVVPVSAASGEQVEVLVDVLASKMEEGPAFY 182
Query 182 PDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRD----DLIDVHAA 237
PDGELTDEPEE LMAELIREAAL+G+ DELPHSLAVVI+E+ PREGR +L+DVHA
Sbjct 183 PDGELTDEPEETLMAELIREAALEGLGDELPHSLAVVIEEIIPREGRTEKQGELLDVHAL 242
Query 238 LYVERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGR 297
LYVER SQKGIVIGKGGARLREVGT AR QIE LLGTK++L+L VKVAK+WQRDPKQLGR
Sbjct 243 LYVERPSQKGIVIGKGGARLREVGTKARLQIEKLLGTKIFLELHVKVAKDWQRDPKQLGR 302
Query 298 LGF 300
LGF
Sbjct 303 LGF 305
>gi|226360374|ref|YP_002778152.1| GTP-binding protein Era [Rhodococcus opacus B4]
gi|226238859|dbj|BAH49207.1| GTP-binding protein Era [Rhodococcus opacus B4]
Length=305
Score = 457 bits (1177), Expect = 8e-127, Method: Compositional matrix adjust.
Identities = 227/302 (76%), Positives = 261/302 (87%), Gaps = 5/302 (1%)
Query 3 EFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDTP 62
EF SGFVC VGRPNTGKSTLTNALVG+K+AITS+RPQTTRH IRGIVH D Q+ILVDTP
Sbjct 5 EFRSGFVCFVGRPNTGKSTLTNALVGSKIAITSSRPQTTRHTIRGIVHRDHAQLILVDTP 64
Query 63 GLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLVV 122
GLHRPRTLLG+RLNDLVR+TY+ VDVI LCIPADE IGPGDRWIV+Q+R P TTLV
Sbjct 65 GLHRPRTLLGQRLNDLVRDTYSEVDVICLCIPADEKIGPGDRWIVQQVRQIAP-KTTLVG 123
Query 123 IVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAYYP 182
IVTKIDKV K+ V QL+AVS+L+ ++VPVSA +G++V++L+DVLA+ + GPA+YP
Sbjct 124 IVTKIDKVSKDMVGQQLLAVSQLLGPETDVVPVSAASGEQVEVLVDVLASKMEEGPAFYP 183
Query 183 DGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRD----DLIDVHAAL 238
DGELTDEPEE LMAELIREAAL+G+ DELPHSLAVVI+E+ PREGR +L+DVHA L
Sbjct 184 DGELTDEPEETLMAELIREAALEGLGDELPHSLAVVIEEIIPREGRTEKQGELLDVHALL 243
Query 239 YVERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRL 298
YVER SQKGIVIGKGGARLREVGT AR QIE LLGTK++L+L VKVAK+WQRDPKQLGRL
Sbjct 244 YVERPSQKGIVIGKGGARLREVGTKARLQIEKLLGTKIFLELHVKVAKDWQRDPKQLGRL 303
Query 299 GF 300
GF
Sbjct 304 GF 305
>gi|54023403|ref|YP_117645.1| GTP-binding protein Era [Nocardia farcinica IFM 10152]
gi|54014911|dbj|BAD56281.1| putative GTP-binding protein [Nocardia farcinica IFM 10152]
Length=305
Score = 457 bits (1176), Expect = 1e-126, Method: Compositional matrix adjust.
Identities = 220/297 (75%), Positives = 260/297 (88%), Gaps = 1/297 (0%)
Query 4 FHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDTPG 63
F SGFVC VGRPNTGKSTLTNALVGAK+AITS+RPQTTRH IRGIVH + Q+ILVDTPG
Sbjct 10 FRSGFVCFVGRPNTGKSTLTNALVGAKIAITSSRPQTTRHTIRGIVHREHAQLILVDTPG 69
Query 64 LHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLVVI 123
LHRPRTLLG+RLNDLVR+TY+ VDVI +CIPADE IGPGDRWIV+Q++ P TTL+ +
Sbjct 70 LHRPRTLLGQRLNDLVRDTYSEVDVIAICIPADEKIGPGDRWIVQQVKQMAP-KTTLLGV 128
Query 124 VTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAYYPD 183
VTKIDKV +++V QL+AVSEL+ AE+VPVSA+ G++V++L+DV+AA +P GPA+YPD
Sbjct 129 VTKIDKVGRQQVAEQLLAVSELLGPQAEVVPVSAVRGEQVEVLVDVIAAKMPEGPAFYPD 188
Query 184 GELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALYVERD 243
GELTDEPEE LMAELIREAAL+GVRDELPHSLAVVI+EV PRE D++DVHA LYVER
Sbjct 189 GELTDEPEETLMAELIREAALEGVRDELPHSLAVVIEEVLPREENPDMLDVHALLYVERP 248
Query 244 SQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLGF 300
SQK IVIGKGG+RL+EVGT AR QIE++LG ++YL L VKVAK+WQRDPKQLG+LGF
Sbjct 249 SQKAIVIGKGGSRLKEVGTNARKQIEHILGVRIYLHLHVKVAKDWQRDPKQLGKLGF 305
>gi|312140286|ref|YP_004007622.1| gtpase [Rhodococcus equi 103S]
gi|325677056|ref|ZP_08156726.1| GTP-binding protein Era [Rhodococcus equi ATCC 33707]
gi|311889625|emb|CBH48942.1| putative GTPase [Rhodococcus equi 103S]
gi|325552127|gb|EGD21819.1| GTP-binding protein Era [Rhodococcus equi ATCC 33707]
Length=305
Score = 456 bits (1172), Expect = 3e-126, Method: Compositional matrix adjust.
Identities = 227/303 (75%), Positives = 259/303 (86%), Gaps = 5/303 (1%)
Query 2 TEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDT 61
EF SGFVC VGRPNTGKSTLTNALVG K+AITS+RPQTTRH IRGIVH D Q+ILVDT
Sbjct 4 NEFRSGFVCFVGRPNTGKSTLTNALVGEKIAITSSRPQTTRHTIRGIVHRDFAQLILVDT 63
Query 62 PGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLV 121
PGLHRPRTLLG+RLNDLVR+TY+ VDVI LCIPADE IGPGDRWI+EQ+R P T LV
Sbjct 64 PGLHRPRTLLGQRLNDLVRDTYSEVDVICLCIPADEKIGPGDRWILEQVRQMAP-KTKLV 122
Query 122 VIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAYY 181
IVTKIDKV K+ V AQL+A+S+L+ AE++PVSA++G++V+LL+ VLA + GPA+Y
Sbjct 123 GIVTKIDKVSKDGVAAQLMALSKLLGPEAEVIPVSAVSGEQVELLVKVLAGLMEPGPAFY 182
Query 182 PDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRD----DLIDVHAA 237
PDGELTDEPEE LMAELIREAAL+G+ DELPHSLAVVI+EV REGR +L+DVHA
Sbjct 183 PDGELTDEPEETLMAELIREAALEGLGDELPHSLAVVIEEVREREGRTEKQGELLDVHAL 242
Query 238 LYVERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGR 297
LYVER SQKGIVIGKGGARLREVGTAAR QIE LLG K++L+L VKVAK+WQRDPKQLGR
Sbjct 243 LYVERPSQKGIVIGKGGARLREVGTAARKQIEKLLGVKIFLELHVKVAKDWQRDPKQLGR 302
Query 298 LGF 300
LGF
Sbjct 303 LGF 305
>gi|229493118|ref|ZP_04386910.1| GTP-binding protein Era [Rhodococcus erythropolis SK121]
gi|229319849|gb|EEN85678.1| GTP-binding protein Era [Rhodococcus erythropolis SK121]
Length=305
Score = 451 bits (1159), Expect = 9e-125, Method: Compositional matrix adjust.
Identities = 222/303 (74%), Positives = 261/303 (87%), Gaps = 5/303 (1%)
Query 2 TEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDT 61
EF SGFVC VGRPNTGKSTLTNALVG+K+AITS+RPQTTRH IRGIVH + Q+ILVDT
Sbjct 4 NEFRSGFVCFVGRPNTGKSTLTNALVGSKIAITSSRPQTTRHTIRGIVHREHAQLILVDT 63
Query 62 PGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLV 121
PGLH+PRTLLG+RLNDLVR+TY+ VDVI LCIPADEAIGPGDRWIV+Q+R P T LV
Sbjct 64 PGLHKPRTLLGQRLNDLVRDTYSEVDVICLCIPADEAIGPGDRWIVQQVRQMAP-KTKLV 122
Query 122 VIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAYY 181
IVTKIDKV ++ V QL+A+S L+ +E+VPVSA +G++V++L+DVLA + GPA+Y
Sbjct 123 GIVTKIDKVSRDAVGKQLLALSTLLGPESEVVPVSAKSGEQVEILVDVLAGLMDEGPAFY 182
Query 182 PDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRD----DLIDVHAA 237
PDGELTDEPEEVLMAELIREAAL+G+ +ELPHSLAVVI+EV PREGR +++DVHA
Sbjct 183 PDGELTDEPEEVLMAELIREAALEGLGEELPHSLAVVIEEVIPREGRTEKQGEMLDVHAL 242
Query 238 LYVERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGR 297
LYVER SQKGIVIGKGGARLREVGT+AR QIE LLG +++L+L VKVAK+WQRDPKQLGR
Sbjct 243 LYVERPSQKGIVIGKGGARLREVGTSARLQIEKLLGVRIFLELHVKVAKDWQRDPKQLGR 302
Query 298 LGF 300
LGF
Sbjct 303 LGF 305
>gi|226307218|ref|YP_002767178.1| GTP-binding protein Era [Rhodococcus erythropolis PR4]
gi|226186335|dbj|BAH34439.1| probable GTP-binding protein Era [Rhodococcus erythropolis PR4]
Length=305
Score = 449 bits (1156), Expect = 2e-124, Method: Compositional matrix adjust.
Identities = 221/303 (73%), Positives = 261/303 (87%), Gaps = 5/303 (1%)
Query 2 TEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDT 61
EF SGFVC VGRPNTGKSTLTNALVG+K+AITS+RPQTTRH IRGIVH + Q+ILVDT
Sbjct 4 NEFRSGFVCFVGRPNTGKSTLTNALVGSKIAITSSRPQTTRHTIRGIVHREHAQLILVDT 63
Query 62 PGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLV 121
PGLH+PRTLLG+RLNDLVR+TY+ VDVI LCIPADEAIGPGDRWIV+Q+R P T LV
Sbjct 64 PGLHKPRTLLGQRLNDLVRDTYSEVDVICLCIPADEAIGPGDRWIVQQIRQMAP-KTKLV 122
Query 122 VIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAYY 181
IVTKIDKV ++ V QL+A+S ++ +E+VPVSA +G++V++L+DVLA + GPA+Y
Sbjct 123 GIVTKIDKVSRDAVGKQLLALSTVLGPESEVVPVSAKSGEQVEILVDVLAGLMDEGPAFY 182
Query 182 PDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRD----DLIDVHAA 237
PDGELTDEPEEVLMAELIREAAL+G+ +ELPHSLAVVI+EV PREGR +++DVHA
Sbjct 183 PDGELTDEPEEVLMAELIREAALEGLGEELPHSLAVVIEEVIPREGRTEKQGEMLDVHAL 242
Query 238 LYVERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGR 297
LYVER SQKGIVIGKGGARLREVGT+AR QIE LLG +++L+L VKVAK+WQRDPKQLGR
Sbjct 243 LYVERPSQKGIVIGKGGARLREVGTSARLQIEKLLGVRIFLELHVKVAKDWQRDPKQLGR 302
Query 298 LGF 300
LGF
Sbjct 303 LGF 305
>gi|326381616|ref|ZP_08203310.1| GTPase Era [Gordonia neofelifaecis NRRL B-59395]
gi|326199863|gb|EGD57043.1| GTPase Era [Gordonia neofelifaecis NRRL B-59395]
Length=298
Score = 443 bits (1140), Expect = 1e-122, Method: Compositional matrix adjust.
Identities = 223/300 (75%), Positives = 257/300 (86%), Gaps = 2/300 (0%)
Query 1 MTEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVD 60
MTEF SGF+C VGRPNTGKSTLTNALVG KVAITS RPQTTRH IRGIV+ D Q+ILVD
Sbjct 1 MTEFRSGFICFVGRPNTGKSTLTNALVGDKVAITSNRPQTTRHTIRGIVNRPDAQLILVD 60
Query 61 TPGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTL 120
TPGLHRPRTLLG+RLNDLVRETYA VDVI +CIPADEAIGPGDR I+E++++T P T
Sbjct 61 TPGLHRPRTLLGQRLNDLVRETYADVDVICVCIPADEAIGPGDRRIIEEIQATTP-RTRK 119
Query 121 VVIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAY 180
V IVTKID+V EKVVAQL+ +S+L+ AE+VP SA +G ++D+L DVL + GPA+
Sbjct 120 VGIVTKIDRVGHEKVVAQLLELSKLMGPDAEVVPCSAKSGKQLDVLGDVLVSLCEEGPAF 179
Query 181 YPDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALYV 240
YPDGELTDEPE+VLMAE IREAAL+GVRDELPHSLAVVI+EV PRE D++DVHA LYV
Sbjct 180 YPDGELTDEPEQVLMAEFIREAALEGVRDELPHSLAVVIEEVIPRED-SDIVDVHAILYV 238
Query 241 ERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLGF 300
ERDSQKGI+IG G+RL+EVGT AR+QIE LLGT++YLDL VKVAK+WQRDPKQLGRLGF
Sbjct 239 ERDSQKGIIIGHKGSRLKEVGTTARAQIERLLGTRIYLDLHVKVAKDWQRDPKQLGRLGF 298
>gi|343924053|ref|ZP_08763616.1| GTP-binding protein Era homolog [Gordonia alkanivorans NBRC 16433]
gi|343765858|dbj|GAA10542.1| GTP-binding protein Era homolog [Gordonia alkanivorans NBRC 16433]
Length=307
Score = 440 bits (1132), Expect = 1e-121, Method: Compositional matrix adjust.
Identities = 219/302 (73%), Positives = 255/302 (85%), Gaps = 5/302 (1%)
Query 3 EFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDTP 62
EF SGFVC VGRPNTGKSTLTNALVG K+AITS RPQTTRH IRGIV+ D Q+ILVDTP
Sbjct 7 EFRSGFVCFVGRPNTGKSTLTNALVGEKIAITSNRPQTTRHTIRGIVNRPDAQLILVDTP 66
Query 63 GLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLVV 122
GLHRPRTLLGKRLN+LVR+TY+ VDVIG+CIPADEAIGPGDRWI+ Q+R P TTL+
Sbjct 67 GLHRPRTLLGKRLNELVRDTYSEVDVIGVCIPADEAIGPGDRWIISQVREMAP-RTTLLG 125
Query 123 IVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAYYP 182
+VTKID+V E+V QL+A+SEL+ AE+VPVSA +G ++D+L D+L + + GPA+YP
Sbjct 126 VVTKIDRVGPEQVAKQLMALSELLGPDAEVVPVSAKSGKQLDVLSDLLVSLMEEGPAFYP 185
Query 183 DGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGR----DDLIDVHAAL 238
DGELTDEPE+VLMAE IREAAL+GV DELPHSLAVVI+EV RE R ++DVHA L
Sbjct 186 DGELTDEPEQVLMAEFIREAALEGVHDELPHSLAVVIEEVIDREDRRPDQPPMVDVHAVL 245
Query 239 YVERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRL 298
+VERDSQKGI+IG+ GARL+EVGT AR+QIE LLGTKVYLDL VKVAK+WQRDPKQL RL
Sbjct 246 FVERDSQKGIIIGRKGARLKEVGTVARAQIERLLGTKVYLDLHVKVAKDWQRDPKQLRRL 305
Query 299 GF 300
GF
Sbjct 306 GF 307
>gi|262203045|ref|YP_003274253.1| GTP-binding protein Era [Gordonia bronchialis DSM 43247]
gi|262086392|gb|ACY22360.1| GTP-binding protein Era [Gordonia bronchialis DSM 43247]
Length=302
Score = 437 bits (1125), Expect = 7e-121, Method: Compositional matrix adjust.
Identities = 216/303 (72%), Positives = 257/303 (85%), Gaps = 4/303 (1%)
Query 1 MTEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVD 60
M+EF SGFVC VGRPNTGKSTLTNALVG K+AITS RPQTTRHAIRGIV+ D Q+ILVD
Sbjct 1 MSEFRSGFVCFVGRPNTGKSTLTNALVGEKIAITSNRPQTTRHAIRGIVNRPDAQLILVD 60
Query 61 TPGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTL 120
TPGLHRPRTLLG+RLNDLV++T+A VDVIG+C+PADE IGPGD+WIV Q+R P TT+
Sbjct 61 TPGLHRPRTLLGQRLNDLVQDTFAEVDVIGVCVPADEKIGPGDKWIVSQVRHMAP-KTTV 119
Query 121 VVIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAY 180
+ IVTKID+V EKV AQL+A+S+L+ +E+VPVSA +G +VD+L DVL + + GPA+
Sbjct 120 LGIVTKIDRVGPEKVAAQLLALSKLLGPTSEVVPVSAKSGKQVDVLTDVLVSLMQPGPAF 179
Query 181 YPDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDD---LIDVHAA 237
YP+GELTDE ++VLMAE IREAAL+GVRDELPHSLAVVI+EV R+ D ++DVHA
Sbjct 180 YPEGELTDESDDVLMAEFIREAALEGVRDELPHSLAVVIEEVIERDREPDQQPMLDVHAI 239
Query 238 LYVERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGR 297
LYVERDSQKGI+IG GARL+EVGT AR+QIE LLG +VYLDL VKVAK+WQRDPKQLGR
Sbjct 240 LYVERDSQKGIIIGHKGARLKEVGTVARAQIERLLGARVYLDLHVKVAKDWQRDPKQLGR 299
Query 298 LGF 300
+GF
Sbjct 300 MGF 302
>gi|333918872|ref|YP_004492453.1| GTP-binding protein [Amycolicicoccus subflavus DQS3-9A1]
gi|333481093|gb|AEF39653.1| GTP-binding protein [Amycolicicoccus subflavus DQS3-9A1]
Length=309
Score = 432 bits (1111), Expect = 3e-119, Method: Compositional matrix adjust.
Identities = 212/300 (71%), Positives = 251/300 (84%), Gaps = 3/300 (1%)
Query 3 EFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDTP 62
+F SGFVCLVGRPNTGKSTLTNALVGAKVAITS+RPQTTRH IRGI+H DD QIILVDTP
Sbjct 11 DFRSGFVCLVGRPNTGKSTLTNALVGAKVAITSSRPQTTRHTIRGIIHRDDAQIILVDTP 70
Query 63 GLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLVV 122
GLHRPRTLLG+RLNDLVR+TY VD +G+CIPADE IGPGDRWI EQ+ + P TTL
Sbjct 71 GLHRPRTLLGQRLNDLVRDTYTEVDAVGICIPADEKIGPGDRWIHEQIGAVAP-KTTLFG 129
Query 123 IVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAYYP 182
IVTKIDKV K V QL+AVS+L+ E++PVSA +G+ +D ++ +L + +P GPA+YP
Sbjct 130 IVTKIDKVSKNAVAEQLLAVSQLLGPEREVIPVSATSGENLDRVVALLRSLMPPGPAFYP 189
Query 183 DGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGR--DDLIDVHAALYV 240
DGELTDEPE VLMAELIREAAL+GVRDELPHSLAVVI+EV+ + R + ++ + A LYV
Sbjct 190 DGELTDEPENVLMAELIREAALEGVRDELPHSLAVVIEEVNDSKTRRGEPVLTIFANLYV 249
Query 241 ERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLGF 300
ER SQK I+IGKGGARLREVG AR+Q+E + GTKV+LDL VK+AK+WQRDPKQLG+LGF
Sbjct 250 ERSSQKAIIIGKGGARLREVGIKARAQLERIFGTKVFLDLHVKIAKDWQRDPKQLGKLGF 309
>gi|319947868|ref|ZP_08022055.1| GTPase Era [Dietzia cinnamea P4]
gi|319438474|gb|EFV93407.1| GTPase Era [Dietzia cinnamea P4]
Length=302
Score = 427 bits (1099), Expect = 7e-118, Method: Compositional matrix adjust.
Identities = 211/297 (72%), Positives = 249/297 (84%), Gaps = 1/297 (0%)
Query 4 FHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDTPG 63
+ SGFV VGRPNTGKSTLTNALVG K+AITS +PQTTRHAIRGIVH D QIILVDTPG
Sbjct 7 YRSGFVSFVGRPNTGKSTLTNALVGEKIAITSAKPQTTRHAIRGIVHRSDAQIILVDTPG 66
Query 64 LHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLVVI 123
LHRPRTLLG+RLN LV +TY+ VD+IGLCIPA E IGPGDRWI+EQ+R P T L+ +
Sbjct 67 LHRPRTLLGERLNALVEDTYSDVDLIGLCIPAGERIGPGDRWILEQVRKLCP-TTPLLGL 125
Query 124 VTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAYYPD 183
VTKID V K+KV+ QLVAVSEL+ +E+VPVSA++G++VD++ DV+A+ LP GP +YPD
Sbjct 126 VTKIDTVSKQKVMEQLVAVSELLGPDSEVVPVSAVSGEQVDVVADVIASLLPEGPQFYPD 185
Query 184 GELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALYVERD 243
+T+E +E MAELIREAAL+GVRDELPHS+AV I+EV P EGRDD++DVHA +YVER
Sbjct 186 DVVTEESDETRMAELIREAALEGVRDELPHSIAVTIEEVLPHEGRDDMVDVHATVYVERQ 245
Query 244 SQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLGF 300
SQK IV+GKGG+R+REVGT AR+ IE LLGTKVYLDL VKV K WQRDPK LGRLGF
Sbjct 246 SQKSIVLGKGGSRMREVGTRARAGIEALLGTKVYLDLHVKVLKEWQRDPKMLGRLGF 302
>gi|296130043|ref|YP_003637293.1| GTP-binding protein Era [Cellulomonas flavigena DSM 20109]
gi|296021858|gb|ADG75094.1| GTP-binding protein Era [Cellulomonas flavigena DSM 20109]
Length=306
Score = 412 bits (1059), Expect = 3e-113, Method: Compositional matrix adjust.
Identities = 211/303 (70%), Positives = 245/303 (81%), Gaps = 9/303 (2%)
Query 6 SGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDTPGLH 65
SGF CLVGRPNTGKSTLTNALVG KVAITS RPQTTRH +RGIVH +D Q++LVDTPGLH
Sbjct 5 SGFACLVGRPNTGKSTLTNALVGQKVAITSGRPQTTRHVVRGIVHREDAQLVLVDTPGLH 64
Query 66 RPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGP---ANTTLVV 122
RPRTLLG+RLNDLVR+T VDVIG C+PADE IGPGDR+I EQL P + T +V
Sbjct 65 RPRTLLGERLNDLVRDTLTEVDVIGFCLPADEKIGPGDRFIAEQLARLAPPGGSGTPVVA 124
Query 123 IVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAYYP 182
IVTK D VP+ ++ QL+AV +L + A+IVPVS+ G +VD L DVL A LP GPA YP
Sbjct 125 IVTKTDTVPRARLAEQLLAVDQL-GDWADIVPVSSQAGYQVDTLADVLVAHLPEGPALYP 183
Query 183 DGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDD-----LIDVHAA 237
+GELTDEPE V++AEL+REAAL+GVRDELPHSLAVV+DE+ PRE R L+DV
Sbjct 184 EGELTDEPEHVMVAELVREAALEGVRDELPHSLAVVVDEIVPREQRPGTDGRPLLDVRVH 243
Query 238 LYVERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGR 297
L+VERDSQK IVIG+GGARLR+VGT AR+QIE LLG +V+LDL VKVAK+WQRDPKQLGR
Sbjct 244 LFVERDSQKAIVIGRGGARLRDVGTRARTQIEALLGARVFLDLHVKVAKDWQRDPKQLGR 303
Query 298 LGF 300
LGF
Sbjct 304 LGF 306
>gi|256375392|ref|YP_003099052.1| GTP-binding protein Era [Actinosynnema mirum DSM 43827]
gi|255919695|gb|ACU35206.1| GTP-binding protein Era [Actinosynnema mirum DSM 43827]
Length=298
Score = 410 bits (1053), Expect = 2e-112, Method: Compositional matrix adjust.
Identities = 197/300 (66%), Positives = 244/300 (82%), Gaps = 2/300 (0%)
Query 1 MTEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVD 60
M + SGF C VGRPN GKSTLTNALVG KVAITS++PQTTRH IRGIVH +D Q+ILVD
Sbjct 1 MDGYRSGFACFVGRPNAGKSTLTNALVGTKVAITSSKPQTTRHTIRGIVHREDGQLILVD 60
Query 61 TPGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTL 120
TPGLHRPRTLLG+RLNDLVRET++ VDV+G C+PAD+ +GPGD++I +L T +
Sbjct 61 TPGLHRPRTLLGQRLNDLVRETWSEVDVVGFCVPADQKVGPGDKFIAAELAKIA-KRTPV 119
Query 121 VVIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAY 180
+ IVTK D VP+++V+ QL+A+ E V AEI+PVSA+ G +VD L D+L LP GP
Sbjct 120 IGIVTKTDLVPQQQVLEQLIALQE-VMEFAEIIPVSAVDGYQVDTLSDLLLGKLPEGPPL 178
Query 181 YPDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALYV 240
YPDGELTDEPE+ L+AELIREAAL+GVRDELPHS+AVV++E+ PREGRDDL+D+HA ++V
Sbjct 179 YPDGELTDEPEQTLVAELIREAALEGVRDELPHSIAVVVEEMLPREGRDDLVDIHANVFV 238
Query 241 ERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLGF 300
ER SQK I++G G RL++VG +R QIE LLGT+VYLDL +K+AK+WQRDPKQL RLGF
Sbjct 239 ERPSQKAIILGHRGERLKQVGITSRHQIEKLLGTRVYLDLHIKIAKDWQRDPKQLRRLGF 298
>gi|134098073|ref|YP_001103734.1| GTP-binding protein Era [Saccharopolyspora erythraea NRRL 2338]
gi|291007468|ref|ZP_06565441.1| GTP-binding protein Era [Saccharopolyspora erythraea NRRL 2338]
gi|133910696|emb|CAM00809.1| GTP-binding protein of Era/ThdF family [Saccharopolyspora erythraea
NRRL 2338]
Length=301
Score = 407 bits (1046), Expect = 1e-111, Method: Compositional matrix adjust.
Identities = 201/295 (69%), Positives = 239/295 (82%), Gaps = 2/295 (0%)
Query 6 SGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDTPGLH 65
SGF C VGRPN GKSTLTNALVG+KVAITS++PQTTRHAIRGIVH D Q+I+VDTPGLH
Sbjct 9 SGFACFVGRPNAGKSTLTNALVGSKVAITSSKPQTTRHAIRGIVHRPDAQLIIVDTPGLH 68
Query 66 RPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLVVIVT 125
RPRTLLG+RLNDLV ET++ VDV+G C+PAD+ IGPGDR+I EQL T ++ +VT
Sbjct 69 RPRTLLGQRLNDLVYETWSEVDVVGFCVPADQKIGPGDRYIAEQLAKVA-KRTPVIGVVT 127
Query 126 KIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAYYPDGE 185
K D V K++V QL+A+ + V A++VP SA+ ++D+L D+L LP GP YPDGE
Sbjct 128 KTDLVGKQQVAEQLLALQQ-VMEFADLVPCSAVDSYQMDVLADLLVGRLPEGPQLYPDGE 186
Query 186 LTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALYVERDSQ 245
LTDEPE L+AELIREAAL+GVRDELPHSLAV I+E+ PREGRDDLIDVHA +YVER SQ
Sbjct 187 LTDEPETTLIAELIREAALEGVRDELPHSLAVGIEEMVPREGRDDLIDVHAVIYVERQSQ 246
Query 246 KGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLGF 300
K IVIG+GG RLR VG+ AR I+ LLG+K+YLDL VKVAK+WQRDPKQL RLGF
Sbjct 247 KAIVIGRGGERLRAVGSQARKHIQALLGSKIYLDLHVKVAKDWQRDPKQLRRLGF 301
>gi|257055404|ref|YP_003133236.1| GTP-binding protein Era [Saccharomonospora viridis DSM 43017]
gi|256585276|gb|ACU96409.1| GTP-binding protein Era [Saccharomonospora viridis DSM 43017]
Length=300
Score = 405 bits (1040), Expect = 5e-111, Method: Compositional matrix adjust.
Identities = 199/298 (67%), Positives = 245/298 (83%), Gaps = 2/298 (0%)
Query 3 EFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDTP 62
E SGF C VGRPN GKSTLTNALVG+KVAITS++PQTTRHAIRGIVH +D Q+I+VDTP
Sbjct 5 EHRSGFACFVGRPNAGKSTLTNALVGSKVAITSSKPQTTRHAIRGIVHREDAQLIIVDTP 64
Query 63 GLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLVV 122
GLHRPRTLLG+RLND+VR T++ VDV+G C+PADE IGPGDR+I +L T ++
Sbjct 65 GLHRPRTLLGQRLNDIVRATWSEVDVVGFCVPADEKIGPGDRFIANELTKIA-RRTPVLG 123
Query 123 IVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAYYP 182
IVTK D V KE+V QL+A+ + V + A+++PVSA+ G +VD L D+L A LP GP YP
Sbjct 124 IVTKTDLVSKEQVAKQLLALQD-VMDFADLIPVSAVDGYQVDTLADLLVARLPEGPELYP 182
Query 183 DGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALYVER 242
DG+LTDEPE+ L+AELIREAAL+GVRDELPHS+AVV++E+ PR GRDDL+D++A +YVER
Sbjct 183 DGDLTDEPEQTLVAELIREAALEGVRDELPHSIAVVVEEMYPRPGRDDLVDIYAHVYVER 242
Query 243 DSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLGF 300
SQ+GIV+G G+RL++VG AR QIE LLG+KVYLDL VKVAK+WQRDPKQL RLGF
Sbjct 243 PSQRGIVLGHRGSRLKDVGARARRQIEALLGSKVYLDLHVKVAKDWQRDPKQLRRLGF 300
>gi|296140452|ref|YP_003647695.1| GTP-binding protein Era [Tsukamurella paurometabola DSM 20162]
gi|296028586|gb|ADG79356.1| GTP-binding protein Era [Tsukamurella paurometabola DSM 20162]
Length=318
Score = 405 bits (1040), Expect = 5e-111, Method: Compositional matrix adjust.
Identities = 200/307 (66%), Positives = 251/307 (82%), Gaps = 9/307 (2%)
Query 2 TEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDT 61
T+F SGFVC VGRPNTGKSTLTNALVG+KVAITS+RPQTTR IRGIV+ + Q++LVDT
Sbjct 13 TDFRSGFVCFVGRPNTGKSTLTNALVGSKVAITSSRPQTTRSTIRGIVNRPNCQLVLVDT 72
Query 62 PGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLV 121
PGLHRPRTLLG+RLNDLVR+TY+ VD+I L IPADE IGPGD++I++Q+R P T L+
Sbjct 73 PGLHRPRTLLGQRLNDLVRDTYSEVDIICLTIPADEKIGPGDKYILDQVRHMAP-RTPLL 131
Query 122 VIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAYY 181
+VTKIDKV ++KV QL+AVS+ + ++++PVSA +G++V+ L+ +LA+ + GPA+Y
Sbjct 132 GVVTKIDKVGRDKVAEQLLAVSKFLGENSDVIPVSAASGEQVEDLVQLLASKMQPGPAFY 191
Query 182 PDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPRE--------GRDDLID 233
PDGE+TD ++ +MAELIREAAL+GVRDELPHSLAVVI+EV RE + ++D
Sbjct 192 PDGEVTDTDDDTMMAELIREAALEGVRDELPHSLAVVIEEVIEREQTEAQVKADKPGMLD 251
Query 234 VHAALYVERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPK 293
VHA LYVER SQK I+IGKGG+RL+ VGT AR++IE LLG KVYL L VKVAK+WQRDPK
Sbjct 252 VHALLYVERPSQKAIIIGKGGSRLKSVGTEARTEIEKLLGRKVYLSLHVKVAKDWQRDPK 311
Query 294 QLGRLGF 300
QLGRLGF
Sbjct 312 QLGRLGF 318
>gi|300788458|ref|YP_003768749.1| GTP-binding protein Era [Amycolatopsis mediterranei U32]
gi|299797972|gb|ADJ48347.1| GTP-binding protein Era [Amycolatopsis mediterranei U32]
gi|340530062|gb|AEK45267.1| GTPase Era [Amycolatopsis mediterranei S699]
Length=303
Score = 405 bits (1040), Expect = 5e-111, Method: Compositional matrix adjust.
Identities = 201/305 (66%), Positives = 242/305 (80%), Gaps = 7/305 (2%)
Query 1 MTEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVD 60
MTE SGF C VGRPN GKSTLTNALVG KVAITS++PQTTRHAIRGIVH +D Q++L+D
Sbjct 1 MTEHRSGFACFVGRPNAGKSTLTNALVGTKVAITSSKPQTTRHAIRGIVHREDAQLVLID 60
Query 61 TPGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQL-----RSTGP 115
TPGLHRPRTLLG+RLND+V T++ VDV+G C+PA+E IGPGD++I +L R G
Sbjct 61 TPGLHRPRTLLGERLNDIVHTTWSEVDVVGFCVPANEKIGPGDKFIAAELQKIALRKNG- 119
Query 116 ANTTLVVIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALP 175
T ++ IVTK D V ++V QL+A+ E V + AE++PVSA+ G +VD L D+L LP
Sbjct 120 MGTPVLGIVTKTDLVQPQQVAEQLLALQE-VMDFAELIPVSAVDGFQVDALADLLVGKLP 178
Query 176 AGPAYYPDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVH 235
GP YP GELTDEPE+ L+AELIREAAL+GVRDELPHS+AV ++E+ PREGRDDLIDVH
Sbjct 179 EGPQLYPGGELTDEPEQTLVAELIREAALEGVRDELPHSIAVTVEEMLPREGRDDLIDVH 238
Query 236 AALYVERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQL 295
A L+VER SQKGI++G G RLREVG AAR IE LLG+KVYLDL +KVAK WQRDP+QL
Sbjct 239 AFLFVERPSQKGIILGHKGERLREVGAAARKNIEALLGSKVYLDLHIKVAKEWQRDPRQL 298
Query 296 GRLGF 300
RLGF
Sbjct 299 RRLGF 303
>gi|296091932|gb|ADG87884.1| GTP-binding protein Era [Thermobispora bispora DSM 43833]
Length=303
Score = 405 bits (1040), Expect = 6e-111, Method: Compositional matrix adjust.
Identities = 200/299 (67%), Positives = 240/299 (81%), Gaps = 2/299 (0%)
Query 2 TEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDT 61
TEF +GF C VGRPN GKSTL NALVG KVAITS++PQTTR AIRGIVH D Q+I+VDT
Sbjct 5 TEFRAGFACFVGRPNVGKSTLMNALVGTKVAITSSKPQTTRRAIRGIVHRPDAQLIIVDT 64
Query 62 PGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLV 121
PG HRPRTLLG+RL+ LV T + VDVIG CIPA+E IG GDR+I E+L++ T +V
Sbjct 65 PGFHRPRTLLGERLDSLVLSTLSEVDVIGFCIPANEPIGKGDRFITEKLKAV--KETPVV 122
Query 122 VIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAYY 181
IVTK D +E++V QLVAV +LV A EIVPVSA++G+R+D+L D+L A LP P Y
Sbjct 123 AIVTKCDVASREQIVKQLVAVEQLVDFAEEIVPVSAVSGERLDVLTDLLVARLPVSPPLY 182
Query 182 PDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALYVE 241
P+GELTDEPE+VL+AELIREAAL+GVRDELPHS+AVV++E+ PRE RDDL++++A +YVE
Sbjct 183 PEGELTDEPEQVLVAELIREAALEGVRDELPHSIAVVVEEMKPREDRDDLLEIYADIYVE 242
Query 242 RDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLGF 300
R SQK IVIG GGARL+EVG AR QIE LLGT VYL L V+VA+ WQRDPK L RLGF
Sbjct 243 RPSQKAIVIGPGGARLKEVGIRARRQIEALLGTHVYLSLHVRVAREWQRDPKMLRRLGF 301
>gi|345462088|ref|YP_003651777.2| GTP-binding protein Era [Thermobispora bispora DSM 43833]
Length=311
Score = 404 bits (1039), Expect = 6e-111, Method: Compositional matrix adjust.
Identities = 200/299 (67%), Positives = 240/299 (81%), Gaps = 2/299 (0%)
Query 2 TEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDT 61
TEF +GF C VGRPN GKSTL NALVG KVAITS++PQTTR AIRGIVH D Q+I+VDT
Sbjct 13 TEFRAGFACFVGRPNVGKSTLMNALVGTKVAITSSKPQTTRRAIRGIVHRPDAQLIIVDT 72
Query 62 PGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLV 121
PG HRPRTLLG+RL+ LV T + VDVIG CIPA+E IG GDR+I E+L++ T +V
Sbjct 73 PGFHRPRTLLGERLDSLVLSTLSEVDVIGFCIPANEPIGKGDRFITEKLKAV--KETPVV 130
Query 122 VIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAYY 181
IVTK D +E++V QLVAV +LV A EIVPVSA++G+R+D+L D+L A LP P Y
Sbjct 131 AIVTKCDVASREQIVKQLVAVEQLVDFAEEIVPVSAVSGERLDVLTDLLVARLPVSPPLY 190
Query 182 PDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALYVE 241
P+GELTDEPE+VL+AELIREAAL+GVRDELPHS+AVV++E+ PRE RDDL++++A +YVE
Sbjct 191 PEGELTDEPEQVLVAELIREAALEGVRDELPHSIAVVVEEMKPREDRDDLLEIYADIYVE 250
Query 242 RDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLGF 300
R SQK IVIG GGARL+EVG AR QIE LLGT VYL L V+VA+ WQRDPK L RLGF
Sbjct 251 RPSQKAIVIGPGGARLKEVGIRARRQIEALLGTHVYLSLHVRVAREWQRDPKMLRRLGF 309
>gi|302528834|ref|ZP_07281176.1| GTP-binding protein Era [Streptomyces sp. AA4]
gi|302437729|gb|EFL09545.1| GTP-binding protein Era [Streptomyces sp. AA4]
Length=299
Score = 402 bits (1032), Expect = 5e-110, Method: Compositional matrix adjust.
Identities = 200/301 (67%), Positives = 239/301 (80%), Gaps = 3/301 (0%)
Query 1 MTEFH-SGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILV 59
MTE H SGF C VGRPN GKSTLTNALVG KVAITS++PQTTRHAIRGIVH DD Q++++
Sbjct 1 MTEPHRSGFACFVGRPNAGKSTLTNALVGTKVAITSSKPQTTRHAIRGIVHRDDAQLVII 60
Query 60 DTPGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTT 119
DTPGLHRPRTLLG+RLND+V ET++ VDV+G C+PA+E IGPGDR+I +L+
Sbjct 61 DTPGLHRPRTLLGQRLNDVVHETWSEVDVVGFCVPANEKIGPGDRFIAAELKKIA-RRPP 119
Query 120 LVVIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPA 179
++ +VTK D V E+V QLVA+ E V A++VPVSA+ G +V + D+L LP GP
Sbjct 120 VIGVVTKTDLVKPEQVAEQLVALQE-VMEFADLVPVSAVDGFQVQTVADLLVQRLPEGPQ 178
Query 180 YYPDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALY 239
YP GELTDEPE+ L+AELIREAAL+GVRDELPHS+AV ++E+ PRE RDDLID+HA LY
Sbjct 179 LYPGGELTDEPEQTLVAELIREAALEGVRDELPHSIAVTVEEMLPREDRDDLIDIHALLY 238
Query 240 VERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLG 299
VER SQKGI++G G RLREVG AR IE LLGTKVYLDL +KVAK+WQRDPKQL RLG
Sbjct 239 VERPSQKGIILGHKGERLREVGATARKHIERLLGTKVYLDLHIKVAKDWQRDPKQLRRLG 298
Query 300 F 300
F
Sbjct 299 F 299
>gi|254232506|ref|ZP_04925833.1| GTP-binding protein era [Mycobacterium tuberculosis C]
gi|124601565|gb|EAY60575.1| GTP-binding protein era [Mycobacterium tuberculosis C]
Length=202
Score = 398 bits (1023), Expect = 5e-109, Method: Compositional matrix adjust.
Identities = 201/202 (99%), Positives = 202/202 (100%), Gaps = 0/202 (0%)
Query 99 IGPGDRWIVEQLRSTGPANTTLVVIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAM 158
+GPGDRWIVEQLRSTGPANTTLVVIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAM
Sbjct 1 MGPGDRWIVEQLRSTGPANTTLVVIVTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAM 60
Query 159 TGDRVDLLIDVLAAALPAGPAYYPDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVV 218
TGDRVDLLIDVLAAALPAGPAYYPDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVV
Sbjct 61 TGDRVDLLIDVLAAALPAGPAYYPDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVV 120
Query 219 IDEVSPREGRDDLIDVHAALYVERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYL 278
IDEVSPREGRDDLIDVHAALYVERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYL
Sbjct 121 IDEVSPREGRDDLIDVHAALYVERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYL 180
Query 279 DLRVKVAKNWQRDPKQLGRLGF 300
DLRVKVAKNWQRDPKQLGRLGF
Sbjct 181 DLRVKVAKNWQRDPKQLGRLGF 202
>gi|260903862|ref|ZP_05912184.1| GTP-binding protein Era [Brevibacterium linens BL2]
Length=311
Score = 397 bits (1019), Expect = 1e-108, Method: Compositional matrix adjust.
Identities = 197/300 (66%), Positives = 236/300 (79%), Gaps = 5/300 (1%)
Query 4 FHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDTPG 63
+ +GF C VGRPNTGKSTLTNALVG KVAITS +PQTTRH IRGIVH DD Q+ILVDTPG
Sbjct 11 YRAGFACFVGRPNTGKSTLTNALVGEKVAITSAKPQTTRHTIRGIVHKDDHQLILVDTPG 70
Query 64 LHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLVVI 123
LH+PRTLLG RLNDLV T + VDVIG C+PADE IGPGDR+I QL T +V +
Sbjct 71 LHKPRTLLGSRLNDLVASTLSEVDVIGFCLPADEPIGPGDRYIASQLELLD-GRTPIVAL 129
Query 124 VTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAYYPD 183
VTK DKVP+EKV L+AV +L + A++VPVSA+ G ++D + VL LP P YP+
Sbjct 130 VTKTDKVPQEKVAEALLAVGQL-ADFADVVPVSAVDGFQIDTVDTVLTGHLPVSPPLYPE 188
Query 184 GELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDD---LIDVHAALYV 240
GELTDEPEE+++AEL+REAAL+GVRDELPHSLA ++E+ PREGR + L +VH LYV
Sbjct 189 GELTDEPEEMMIAELVREAALEGVRDELPHSLAAQVEEMYPREGRSEDNPLWNVHVNLYV 248
Query 241 ERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLGF 300
ER SQK I+IGKGG+RL+ +G+ +R IE LLGTKVYLDL VK+AK+WQRDPKQLGRLGF
Sbjct 249 ERSSQKAIIIGKGGSRLKAIGSESRRGIEALLGTKVYLDLHVKIAKDWQRDPKQLGRLGF 308
>gi|311742993|ref|ZP_07716801.1| GTP-binding protein Era [Aeromicrobium marinum DSM 15272]
gi|311313673|gb|EFQ83582.1| GTP-binding protein Era [Aeromicrobium marinum DSM 15272]
Length=305
Score = 396 bits (1018), Expect = 2e-108, Method: Compositional matrix adjust.
Identities = 199/307 (65%), Positives = 240/307 (79%), Gaps = 9/307 (2%)
Query 1 MTEFHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVD 60
M+ F SGF C VGRPN GKSTLTNALVG KVAITS+RPQTTRHAIRG+VH D QI+LVD
Sbjct 1 MSGFRSGFACFVGRPNVGKSTLTNALVGGKVAITSSRPQTTRHAIRGLVHRPDAQIVLVD 60
Query 61 TPGLHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTL 120
TPGLHRPRTLLG+RLNDLVR T+A VD IGLC+PADE IGPGDR+++ ++ + +
Sbjct 61 TPGLHRPRTLLGQRLNDLVRTTWAEVDTIGLCLPADERIGPGDRFLIREIAAL--RGKPV 118
Query 121 VVIVTKIDKVPKEKVVAQLVAVSELVTNAA----EIVPVSAMTGDRVDLLIDVLAAALPA 176
+ + TK D V ++V L+A+ A E+VPVSA+ D+V LL D++ A LP
Sbjct 119 IAVATKTDLVSPQRVAEHLMAIQAAGEEAGLRWHEMVPVSAVADDQVGLLADLIVATLPE 178
Query 177 GPAYYPDGELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGR---DDLID 233
GPA YP+G+LTDEPE L+AE+IREAAL+GVRDELPHSLAVV+DE+ PREGR + LID
Sbjct 179 GPALYPEGQLTDEPEATLVAEVIREAALEGVRDELPHSLAVVVDEMVPREGRSADNPLID 238
Query 234 VHAALYVERDSQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPK 293
V +YVERDSQKGI+IGK G+RLRE+GT +R+QIE +LGT VYLDL VKVAK WQRDPK
Sbjct 239 VRVNVYVERDSQKGIIIGKQGSRLREIGTTSRAQIEKILGTPVYLDLHVKVAKEWQRDPK 298
Query 294 QLGRLGF 300
QL +LGF
Sbjct 299 QLRKLGF 305
>gi|324998271|ref|ZP_08119383.1| GTPase Era [Pseudonocardia sp. P1]
Length=301
Score = 394 bits (1013), Expect = 7e-108, Method: Compositional matrix adjust.
Identities = 197/297 (67%), Positives = 239/297 (81%), Gaps = 5/297 (1%)
Query 4 FHSGFVCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDTPG 63
F SGF C VGRPN GKSTLTNALVG KVAITS+RPQTTRH IRGIVH D QI+LVDTPG
Sbjct 10 FRSGFACFVGRPNAGKSTLTNALVGQKVAITSSRPQTTRHTIRGIVHRPDAQIVLVDTPG 69
Query 64 LHRPRTLLGKRLNDLVRETYAAVDVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLVVI 123
LHRPRTLLG RLNDLVRET+A VDV+G C+PA+E +G GDR+I E+LR +T +V +
Sbjct 70 LHRPRTLLGSRLNDLVRETWAEVDVVGFCVPANEKVGKGDRFIAEELRKIA-THTPVVAV 128
Query 124 VTKIDKVPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAYYPD 183
VTK D E+V +L VS L+ + AEIVP SA +G +V LL D+L A LP GP YPD
Sbjct 129 VTKTDLARPEQVAERLTEVSGLM-DFAEIVPTSAQSGYQVQLLADLLVARLPEGPQLYPD 187
Query 184 GELTDEPEEVLMAELIREAALQGVRDELPHSLAVVIDEVSPREGRDDLIDVHAALYVERD 243
G+LTDEPE+VL+AEL+REAAL+GVRDELPHS+AVV++E + DL++++A +YVER
Sbjct 188 GDLTDEPEDVLVAELVREAALEGVRDELPHSIAVVVEETI---AKKDLLEIYAIIYVERS 244
Query 244 SQKGIVIGKGGARLREVGTAARSQIENLLGTKVYLDLRVKVAKNWQRDPKQLGRLGF 300
SQKGIVIG+GGARL++VGT AR QIE LLGT+V+LDL VK+A++WQRDPKQL +LGF
Sbjct 245 SQKGIVIGRGGARLKQVGTDARRQIEKLLGTRVHLDLHVKIAEDWQRDPKQLRKLGF 301
Lambda K H
0.318 0.137 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 505145727648
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40