BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2393
Length=281
Score E
Sequences producing significant alignments: (Bits) Value
gi|254365168|ref|ZP_04981214.1| conserved hypothetical protein [... 554 5e-156
gi|15609530|ref|NP_216909.1| hypothetical protein Rv2393 [Mycoba... 553 1e-155
gi|340627402|ref|YP_004745854.1| cobalamin (vitamin b12) biosynt... 553 1e-155
gi|121638272|ref|YP_978496.1| hypothetical protein BCG_2407 [Myc... 550 8e-155
gi|289570539|ref|ZP_06450766.1| conserved hypothetical protein [... 550 8e-155
gi|289750996|ref|ZP_06510374.1| conserved hypothetical protein [... 550 1e-154
gi|298525874|ref|ZP_07013283.1| secreted protein [Mycobacterium ... 543 9e-153
gi|254551441|ref|ZP_05141888.1| hypothetical protein Mtube_13434... 534 5e-150
gi|308369705|ref|ZP_07418769.2| hypothetical protein TMBG_00937 ... 500 7e-140
gi|118464829|ref|YP_881362.1| hypothetical protein MAV_2152 [Myc... 289 3e-76
gi|254774863|ref|ZP_05216379.1| secreted protein [Mycobacterium ... 288 5e-76
gi|336461760|gb|EGO40619.1| hypothetical protein MAPs_27360 [Myc... 288 8e-76
gi|254818691|ref|ZP_05223692.1| secreted protein [Mycobacterium ... 286 2e-75
gi|342857342|ref|ZP_08713998.1| hypothetical protein MCOL_00650 ... 281 6e-74
gi|183983692|ref|YP_001851983.1| hypothetical protein MMAR_3712 ... 280 2e-73
gi|118468708|ref|YP_888801.1| hypothetical protein MSMEG_4529 [M... 255 5e-66
gi|296166241|ref|ZP_06848680.1| secreted protein [Mycobacterium ... 254 1e-65
gi|118618925|ref|YP_907257.1| hypothetical protein MUL_3654 [Myc... 252 4e-65
gi|240168736|ref|ZP_04747395.1| secreted protein [Mycobacterium ... 243 3e-62
gi|183983407|ref|YP_001851698.1| hypothetical protein MMAR_3418 ... 242 4e-62
gi|126436066|ref|YP_001071757.1| cobalamin (vitamin B12) biosynt... 241 6e-62
gi|118618153|ref|YP_906485.1| hypothetical protein MUL_2697 [Myc... 241 9e-62
gi|108800442|ref|YP_640639.1| cobalamin (vitamin B12) biosynthes... 238 8e-61
gi|333990157|ref|YP_004522771.1| hypothetical protein JDM601_151... 236 3e-60
gi|145223271|ref|YP_001133949.1| cobalamin (vitamin B12) biosynt... 228 6e-58
gi|120404817|ref|YP_954646.1| cobalamin (vitamin B12) biosynthes... 206 3e-51
gi|41408135|ref|NP_960971.1| hypothetical protein MAP2037 [Mycob... 194 2e-47
gi|169628748|ref|YP_001702397.1| hypothetical protein MAB_1658c ... 188 7e-46
gi|111018265|ref|YP_701237.1| hypothetical protein RHA1_ro01255 ... 177 2e-42
gi|226307237|ref|YP_002767197.1| ferrochelatase [Rhodococcus ery... 176 4e-42
gi|229493164|ref|ZP_04386956.1| secreted protein [Rhodococcus er... 173 2e-41
gi|226360389|ref|YP_002778167.1| ferrochelatase [Rhodococcus opa... 173 3e-41
gi|312140302|ref|YP_004007638.1| cobalamin biosynthesis protein ... 167 1e-39
gi|325677124|ref|ZP_08156793.1| secreted protein [Rhodococcus eq... 166 2e-39
gi|134098058|ref|YP_001103719.1| cobalamin (vitamin B12) biosynt... 155 8e-36
gi|302528871|ref|ZP_07281213.1| predicted protein [Streptomyces ... 142 8e-32
gi|337768695|emb|CCB77408.1| conserved protein of unknown functi... 141 9e-32
gi|345002831|ref|YP_004805685.1| cobalamin (vitamin B12) biosynt... 140 2e-31
gi|302541800|ref|ZP_07294142.1| putative secreted protein [Strep... 140 2e-31
gi|256375369|ref|YP_003099029.1| cobalamin (vitamin B12) biosynt... 139 4e-31
gi|302557791|ref|ZP_07310133.1| secreted protein [Streptomyces g... 139 4e-31
gi|29828679|ref|NP_823313.1| hypothetical protein SAV_2137 [Stre... 137 1e-30
gi|328885957|emb|CCA59196.1| Sirohydrochlorin ferrochelatase [St... 137 2e-30
gi|300788498|ref|YP_003768789.1| cobalamin biosynthesis-related ... 137 3e-30
gi|329940250|ref|ZP_08289532.1| secreted protein [Streptomyces g... 136 4e-30
gi|21224422|ref|NP_630201.1| secreted protein [Streptomyces coel... 135 6e-30
gi|302554988|ref|ZP_07307330.1| secreted protein [Streptomyces v... 135 6e-30
gi|289768265|ref|ZP_06527643.1| secreted protein [Streptomyces l... 135 7e-30
gi|182435193|ref|YP_001822912.1| hypothetical protein SGR_1400 [... 134 2e-29
gi|302557598|ref|ZP_07309940.1| secreted protein [Streptomyces g... 132 6e-29
>gi|254365168|ref|ZP_04981214.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|134150682|gb|EBA42727.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
Length=287
Score = 554 bits (1428), Expect = 5e-156, Method: Compositional matrix adjust.
Identities = 281/281 (100%), Positives = 281/281 (100%), Gaps = 0/281 (0%)
Query 1 VTAPATMQSAAMLRSGAIEAPPATMQSAAMRWGHLPLAEESGTIAPQLVLTAHGSKDPRS 60
VTAPATMQSAAMLRSGAIEAPPATMQSAAMRWGHLPLAEESGTIAPQLVLTAHGSKDPRS
Sbjct 7 VTAPATMQSAAMLRSGAIEAPPATMQSAAMRWGHLPLAEESGTIAPQLVLTAHGSKDPRS 66
Query 61 AANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTPLLLADAYHARVDI 120
AANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTPLLLADAYHARVDI
Sbjct 67 AANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTPLLLADAYHARVDI 126
Query 121 PAQIASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTLGVVVLAIGSSHPAAN 180
PAQIASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTLGVVVLAIGSSHPAAN
Sbjct 127 PAQIASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTLGVVVLAIGSSHPAAN 186
Query 181 ARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARRMVIAPWLLAPGILSD 240
ARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARRMVIAPWLLAPGILSD
Sbjct 187 ARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARRMVIAPWLLAPGILSD 246
Query 241 RVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA 281
RVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA
Sbjct 247 RVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA 287
>gi|15609530|ref|NP_216909.1| hypothetical protein Rv2393 [Mycobacterium tuberculosis H37Rv]
gi|15841907|ref|NP_336944.1| hypothetical protein MT2463 [Mycobacterium tuberculosis CDC1551]
gi|31793570|ref|NP_856063.1| hypothetical protein Mb2414 [Mycobacterium bovis AF2122/97]
29 more sequence titles
Length=281
Score = 553 bits (1425), Expect = 1e-155, Method: Compositional matrix adjust.
Identities = 280/281 (99%), Positives = 281/281 (100%), Gaps = 0/281 (0%)
Query 1 VTAPATMQSAAMLRSGAIEAPPATMQSAAMRWGHLPLAEESGTIAPQLVLTAHGSKDPRS 60
+TAPATMQSAAMLRSGAIEAPPATMQSAAMRWGHLPLAEESGTIAPQLVLTAHGSKDPRS
Sbjct 1 MTAPATMQSAAMLRSGAIEAPPATMQSAAMRWGHLPLAEESGTIAPQLVLTAHGSKDPRS 60
Query 61 AANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTPLLLADAYHARVDI 120
AANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTPLLLADAYHARVDI
Sbjct 61 AANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTPLLLADAYHARVDI 120
Query 121 PAQIASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTLGVVVLAIGSSHPAAN 180
PAQIASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTLGVVVLAIGSSHPAAN
Sbjct 121 PAQIASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTLGVVVLAIGSSHPAAN 180
Query 181 ARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARRMVIAPWLLAPGILSD 240
ARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARRMVIAPWLLAPGILSD
Sbjct 181 ARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARRMVIAPWLLAPGILSD 240
Query 241 RVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA 281
RVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA
Sbjct 241 RVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA 281
>gi|340627402|ref|YP_004745854.1| cobalamin (vitamin b12) biosynthesis cbix protein [Mycobacterium
canettii CIPT 140010059]
gi|340005592|emb|CCC44756.1| cobalamin (vitamin b12) biosynthesis cbix protein; subname [Mycobacterium
canettii CIPT 140010059]
Length=371
Score = 553 bits (1424), Expect = 1e-155, Method: Compositional matrix adjust.
Identities = 277/278 (99%), Positives = 277/278 (99%), Gaps = 0/278 (0%)
Query 4 PATMQSAAMLRSGAIEAPPATMQSAAMRWGHLPLAEESGTIAPQLVLTAHGSKDPRSAAN 63
PATMQSAAMLRSGAIEAPPATMQSAAMRWGHLPLAEESGTIAPQLVLTAHGSKDPRSAAN
Sbjct 94 PATMQSAAMLRSGAIEAPPATMQSAAMRWGHLPLAEESGTIAPQLVLTAHGSKDPRSAAN 153
Query 64 ARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTPLLLADAYHARVDIPAQ 123
ARAIA RLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTPLLLADAYHARVDIPAQ
Sbjct 154 ARAIASRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTPLLLADAYHARVDIPAQ 213
Query 124 IASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTLGVVVLAIGSSHPAANART 183
IASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTLGVVVLAIGSSHPAANART
Sbjct 214 IASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTLGVVVLAIGSSHPAANART 273
Query 184 STVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARRMVIAPWLLAPGILSDRVR 243
STVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARRMVIAPWLLAPGILSDRVR
Sbjct 274 STVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARRMVIAPWLLAPGILSDRVR 333
Query 244 GYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA 281
GYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA
Sbjct 334 GYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA 371
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/30 (97%), Positives = 30/30 (100%), Gaps = 0/30 (0%)
Query 1 VTAPATMQSAAMLRSGAIEAPPATMQSAAM 30
+TAPATMQSAAMLRSGAIEAPPATMQSAAM
Sbjct 1 MTAPATMQSAAMLRSGAIEAPPATMQSAAM 30
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/27 (100%), Positives = 27/27 (100%), Gaps = 0/27 (0%)
Query 4 PATMQSAAMLRSGAIEAPPATMQSAAM 30
PATMQSAAMLRSGAIEAPPATMQSAAM
Sbjct 22 PATMQSAAMLRSGAIEAPPATMQSAAM 48
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/27 (100%), Positives = 27/27 (100%), Gaps = 0/27 (0%)
Query 4 PATMQSAAMLRSGAIEAPPATMQSAAM 30
PATMQSAAMLRSGAIEAPPATMQSAAM
Sbjct 40 PATMQSAAMLRSGAIEAPPATMQSAAM 66
>gi|121638272|ref|YP_978496.1| hypothetical protein BCG_2407 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224990766|ref|YP_002645453.1| hypothetical protein JTY_2401 [Mycobacterium bovis BCG str. Tokyo
172]
gi|289443915|ref|ZP_06433659.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
8 more sequence titles
Length=299
Score = 550 bits (1418), Expect = 8e-155, Method: Compositional matrix adjust.
Identities = 278/278 (100%), Positives = 278/278 (100%), Gaps = 0/278 (0%)
Query 4 PATMQSAAMLRSGAIEAPPATMQSAAMRWGHLPLAEESGTIAPQLVLTAHGSKDPRSAAN 63
PATMQSAAMLRSGAIEAPPATMQSAAMRWGHLPLAEESGTIAPQLVLTAHGSKDPRSAAN
Sbjct 22 PATMQSAAMLRSGAIEAPPATMQSAAMRWGHLPLAEESGTIAPQLVLTAHGSKDPRSAAN 81
Query 64 ARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTPLLLADAYHARVDIPAQ 123
ARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTPLLLADAYHARVDIPAQ
Sbjct 82 ARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTPLLLADAYHARVDIPAQ 141
Query 124 IASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTLGVVVLAIGSSHPAANART 183
IASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTLGVVVLAIGSSHPAANART
Sbjct 142 IASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTLGVVVLAIGSSHPAANART 201
Query 184 STVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARRMVIAPWLLAPGILSDRVR 243
STVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARRMVIAPWLLAPGILSDRVR
Sbjct 202 STVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARRMVIAPWLLAPGILSDRVR 261
Query 244 GYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA 281
GYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA
Sbjct 262 GYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA 299
>gi|289570539|ref|ZP_06450766.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289544293|gb|EFD47941.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length=293
Score = 550 bits (1417), Expect = 8e-155, Method: Compositional matrix adjust.
Identities = 278/278 (100%), Positives = 278/278 (100%), Gaps = 0/278 (0%)
Query 4 PATMQSAAMLRSGAIEAPPATMQSAAMRWGHLPLAEESGTIAPQLVLTAHGSKDPRSAAN 63
PATMQSAAMLRSGAIEAPPATMQSAAMRWGHLPLAEESGTIAPQLVLTAHGSKDPRSAAN
Sbjct 16 PATMQSAAMLRSGAIEAPPATMQSAAMRWGHLPLAEESGTIAPQLVLTAHGSKDPRSAAN 75
Query 64 ARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTPLLLADAYHARVDIPAQ 123
ARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTPLLLADAYHARVDIPAQ
Sbjct 76 ARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTPLLLADAYHARVDIPAQ 135
Query 124 IASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTLGVVVLAIGSSHPAANART 183
IASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTLGVVVLAIGSSHPAANART
Sbjct 136 IASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTLGVVVLAIGSSHPAANART 195
Query 184 STVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARRMVIAPWLLAPGILSDRVR 243
STVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARRMVIAPWLLAPGILSDRVR
Sbjct 196 STVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARRMVIAPWLLAPGILSDRVR 255
Query 244 GYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA 281
GYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA
Sbjct 256 GYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA 293
>gi|289750996|ref|ZP_06510374.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289754498|ref|ZP_06513876.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289691583|gb|EFD59012.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289695085|gb|EFD62514.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length=288
Score = 550 bits (1416), Expect = 1e-154, Method: Compositional matrix adjust.
Identities = 278/278 (100%), Positives = 278/278 (100%), Gaps = 0/278 (0%)
Query 4 PATMQSAAMLRSGAIEAPPATMQSAAMRWGHLPLAEESGTIAPQLVLTAHGSKDPRSAAN 63
PATMQSAAMLRSGAIEAPPATMQSAAMRWGHLPLAEESGTIAPQLVLTAHGSKDPRSAAN
Sbjct 11 PATMQSAAMLRSGAIEAPPATMQSAAMRWGHLPLAEESGTIAPQLVLTAHGSKDPRSAAN 70
Query 64 ARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTPLLLADAYHARVDIPAQ 123
ARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTPLLLADAYHARVDIPAQ
Sbjct 71 ARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTPLLLADAYHARVDIPAQ 130
Query 124 IASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTLGVVVLAIGSSHPAANART 183
IASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTLGVVVLAIGSSHPAANART
Sbjct 131 IASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTLGVVVLAIGSSHPAANART 190
Query 184 STVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARRMVIAPWLLAPGILSDRVR 243
STVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARRMVIAPWLLAPGILSDRVR
Sbjct 191 STVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARRMVIAPWLLAPGILSDRVR 250
Query 244 GYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA 281
GYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA
Sbjct 251 GYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA 288
>gi|298525874|ref|ZP_07013283.1| secreted protein [Mycobacterium tuberculosis 94_M4241A]
gi|308232119|ref|ZP_07414996.2| hypothetical protein TMAG_02951 [Mycobacterium tuberculosis SUMu001]
gi|308404963|ref|ZP_07494186.2| hypothetical protein TMLG_02144 [Mycobacterium tuberculosis SUMu012]
6 more sequence titles
Length=275
Score = 543 bits (1400), Expect = 9e-153, Method: Compositional matrix adjust.
Identities = 275/275 (100%), Positives = 275/275 (100%), Gaps = 0/275 (0%)
Query 7 MQSAAMLRSGAIEAPPATMQSAAMRWGHLPLAEESGTIAPQLVLTAHGSKDPRSAANARA 66
MQSAAMLRSGAIEAPPATMQSAAMRWGHLPLAEESGTIAPQLVLTAHGSKDPRSAANARA
Sbjct 1 MQSAAMLRSGAIEAPPATMQSAAMRWGHLPLAEESGTIAPQLVLTAHGSKDPRSAANARA 60
Query 67 IAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTPLLLADAYHARVDIPAQIAS 126
IAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTPLLLADAYHARVDIPAQIAS
Sbjct 61 IAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTPLLLADAYHARVDIPAQIAS 120
Query 127 CRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTLGVVVLAIGSSHPAANARTSTV 186
CRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTLGVVVLAIGSSHPAANARTSTV
Sbjct 121 CRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTLGVVVLAIGSSHPAANARTSTV 180
Query 187 ASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARRMVIAPWLLAPGILSDRVRGYA 246
ASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARRMVIAPWLLAPGILSDRVRGYA
Sbjct 181 ASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARRMVIAPWLLAPGILSDRVRGYA 240
Query 247 REAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA 281
REAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA
Sbjct 241 REAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA 275
>gi|254551441|ref|ZP_05141888.1| hypothetical protein Mtube_13434 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
Length=270
Score = 534 bits (1376), Expect = 5e-150, Method: Compositional matrix adjust.
Identities = 270/270 (100%), Positives = 270/270 (100%), Gaps = 0/270 (0%)
Query 12 MLRSGAIEAPPATMQSAAMRWGHLPLAEESGTIAPQLVLTAHGSKDPRSAANARAIAGRL 71
MLRSGAIEAPPATMQSAAMRWGHLPLAEESGTIAPQLVLTAHGSKDPRSAANARAIAGRL
Sbjct 1 MLRSGAIEAPPATMQSAAMRWGHLPLAEESGTIAPQLVLTAHGSKDPRSAANARAIAGRL 60
Query 72 ARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTPLLLADAYHARVDIPAQIASCRVGH 131
ARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTPLLLADAYHARVDIPAQIASCRVGH
Sbjct 61 ARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTPLLLADAYHARVDIPAQIASCRVGH 120
Query 132 RVRQASVLGEDIRLVSALHERLTELGVSPFDHTLGVVVLAIGSSHPAANARTSTVASRLA 191
RVRQASVLGEDIRLVSALHERLTELGVSPFDHTLGVVVLAIGSSHPAANARTSTVASRLA
Sbjct 121 RVRQASVLGEDIRLVSALHERLTELGVSPFDHTLGVVVLAIGSSHPAANARTSTVASRLA 180
Query 192 EGTQWAAVTTAFITRPEASLADATDRLRRHGARRMVIAPWLLAPGILSDRVRGYAREAGI 251
EGTQWAAVTTAFITRPEASLADATDRLRRHGARRMVIAPWLLAPGILSDRVRGYAREAGI
Sbjct 181 EGTQWAAVTTAFITRPEASLADATDRLRRHGARRMVIAPWLLAPGILSDRVRGYAREAGI 240
Query 252 AMAQPLGAHPMVAATMWDRYRQAVAGRIAA 281
AMAQPLGAHPMVAATMWDRYRQAVAGRIAA
Sbjct 241 AMAQPLGAHPMVAATMWDRYRQAVAGRIAA 270
>gi|308369705|ref|ZP_07418769.2| hypothetical protein TMBG_00937 [Mycobacterium tuberculosis SUMu002]
gi|308370998|ref|ZP_07423504.2| hypothetical protein TMCG_00492 [Mycobacterium tuberculosis SUMu003]
gi|308372220|ref|ZP_07427865.2| hypothetical protein TMDG_00871 [Mycobacterium tuberculosis SUMu004]
17 more sequence titles
Length=252
Score = 500 bits (1288), Expect = 7e-140, Method: Compositional matrix adjust.
Identities = 252/252 (100%), Positives = 252/252 (100%), Gaps = 0/252 (0%)
Query 30 MRWGHLPLAEESGTIAPQLVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNS 89
MRWGHLPLAEESGTIAPQLVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNS
Sbjct 1 MRWGHLPLAEESGTIAPQLVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNS 60
Query 90 PNLVDVLNRCRGAAVVTPLLLADAYHARVDIPAQIASCRVGHRVRQASVLGEDIRLVSAL 149
PNLVDVLNRCRGAAVVTPLLLADAYHARVDIPAQIASCRVGHRVRQASVLGEDIRLVSAL
Sbjct 61 PNLVDVLNRCRGAAVVTPLLLADAYHARVDIPAQIASCRVGHRVRQASVLGEDIRLVSAL 120
Query 150 HERLTELGVSPFDHTLGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEA 209
HERLTELGVSPFDHTLGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEA
Sbjct 121 HERLTELGVSPFDHTLGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEA 180
Query 210 SLADATDRLRRHGARRMVIAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWD 269
SLADATDRLRRHGARRMVIAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWD
Sbjct 181 SLADATDRLRRHGARRMVIAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWD 240
Query 270 RYRQAVAGRIAA 281
RYRQAVAGRIAA
Sbjct 241 RYRQAVAGRIAA 252
>gi|118464829|ref|YP_881362.1| hypothetical protein MAV_2152 [Mycobacterium avium 104]
gi|118166116|gb|ABK67013.1| secreted protein [Mycobacterium avium 104]
Length=238
Score = 289 bits (739), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 158/237 (67%), Positives = 184/237 (78%), Gaps = 5/237 (2%)
Query 48 LVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGA--AVV 105
LVLTAHGS+DPRSAANA A+A RL RMRPGLDVR+AF ELN+PN VDVL + AVV
Sbjct 4 LVLTAHGSRDPRSAANAEAVADRLRRMRPGLDVRLAFLELNAPNFVDVLAGLPDSRRAVV 63
Query 106 TPLLLADAYHARVDIPAQIASCRVG-HRVRQASVLGEDIRLVSALHERLTELGVSPFDHT 164
PLLLA AYHAR+DIP QIA R G H +RQA VLGED RLV+ L RL E+GVSP D
Sbjct 64 APLLLASAYHARLDIPEQIA--RAGAHGIRQADVLGEDDRLVAVLRGRLAEIGVSPLDDD 121
Query 165 LGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGAR 224
LGV+V+AIGSS+ AANART+ VASRLA GT+WA TTAF TRPEAS+A A D+LRR GAR
Sbjct 122 LGVMVVAIGSSNTAANARTAKVASRLAAGTRWACATTAFATRPEASVARAADQLRRRGAR 181
Query 225 RMVIAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA 281
R+VIAPW LAPG ++D V +AR+ GI MA PLGAH +VA T+ DRY +A++ AA
Sbjct 182 RLVIAPWFLAPGFITDGVSTFARDNGIRMAAPLGAHRLVAETVLDRYDEALSADAAA 238
>gi|254774863|ref|ZP_05216379.1| secreted protein [Mycobacterium avium subsp. avium ATCC 25291]
Length=238
Score = 288 bits (738), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 158/237 (67%), Positives = 184/237 (78%), Gaps = 5/237 (2%)
Query 48 LVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGA--AVV 105
LVLTAHGS+DPRSAANA A+A RL RMRPGLDVR+AF ELN+PN VDVL + AVV
Sbjct 4 LVLTAHGSRDPRSAANAEAVADRLRRMRPGLDVRLAFLELNAPNFVDVLAGLPDSRRAVV 63
Query 106 TPLLLADAYHARVDIPAQIASCRVG-HRVRQASVLGEDIRLVSALHERLTELGVSPFDHT 164
PLLLA AYHAR+DIP QIA R G H +RQA VLGED RLV+ L RL E+GVSP D
Sbjct 64 APLLLASAYHARLDIPEQIA--RAGAHGIRQADVLGEDDRLVAVLRGRLAEIGVSPLDDD 121
Query 165 LGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGAR 224
LGV+V+AIGSS+ AANART+ VASRLA GT+WA TTAF TRPEAS+A A D+LRR GAR
Sbjct 122 LGVMVVAIGSSNIAANARTAKVASRLAAGTRWACATTAFATRPEASVARAADQLRRRGAR 181
Query 225 RMVIAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA 281
R+VIAPW LAPG ++D V +AR+ GI MA PLGAH +VA T+ DRY +A++ AA
Sbjct 182 RLVIAPWFLAPGFITDGVSTFARDNGIRMAAPLGAHRLVAETVLDRYDEALSADAAA 238
>gi|336461760|gb|EGO40619.1| hypothetical protein MAPs_27360 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=238
Score = 288 bits (736), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 158/237 (67%), Positives = 184/237 (78%), Gaps = 5/237 (2%)
Query 48 LVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGA--AVV 105
LVLTAHGS+DPRSAANA A+A RL RMRPGLDVR+AF ELN+PN VDVL + AVV
Sbjct 4 LVLTAHGSRDPRSAANAEAVADRLRRMRPGLDVRLAFLELNAPNFVDVLAGLPDSRRAVV 63
Query 106 TPLLLADAYHARVDIPAQIASCRVGHR-VRQASVLGEDIRLVSALHERLTELGVSPFDHT 164
PLLLA AYHAR+DIP QIA R G R +RQA VLGED RLV+ L RL E+GVSP D
Sbjct 64 APLLLASAYHARLDIPEQIA--RAGARGIRQADVLGEDDRLVAVLRGRLAEIGVSPLDDD 121
Query 165 LGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGAR 224
LGV+V+AIGSS+ AANART+ VASRLA GT+WA TTAF TRPEAS+A A D+LRR GAR
Sbjct 122 LGVMVVAIGSSNIAANARTAKVASRLAAGTRWACATTAFATRPEASVARAADQLRRRGAR 181
Query 225 RMVIAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA 281
R+VIAPW LAPG ++D V +AR+ GI MA PLGAH +VA T+ DRY +A++ AA
Sbjct 182 RLVIAPWFLAPGFITDGVSTFARDNGIRMAAPLGAHRLVAETVLDRYDEALSADAAA 238
>gi|254818691|ref|ZP_05223692.1| secreted protein [Mycobacterium intracellulare ATCC 13950]
Length=238
Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 153/229 (67%), Positives = 178/229 (78%), Gaps = 5/229 (2%)
Query 48 LVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGA--AVV 105
LVLTAHGS+DPRS ANA A+ RL RMRP LDVR+AF ELN+PN VDVL + AVV
Sbjct 4 LVLTAHGSRDPRSGANAEAVTDRLRRMRPDLDVRLAFLELNAPNFVDVLAGLPDSRRAVV 63
Query 106 TPLLLADAYHARVDIPAQIASCRVGHR-VRQASVLGEDIRLVSALHERLTELGVSPFDHT 164
PLLLA AYHAR+DIP QIA R G + +RQA VLGED RLV+ L ERLTE+GVSP D
Sbjct 64 APLLLASAYHARLDIPEQIA--RAGAQGIRQADVLGEDDRLVTVLRERLTEIGVSPLDED 121
Query 165 LGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGAR 224
LGV+V+AIGSS+ AANART+ VASRLA GT+WA TAF TRPEAS+A A D+LRR GAR
Sbjct 122 LGVLVVAIGSSNLAANARTAKVASRLAAGTRWAGAATAFATRPEASVARAADQLRRRGAR 181
Query 225 RMVIAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQ 273
R+VIAPW LAPG ++D V +AR+ GI MA PLGAHP+VA T+ DRY +
Sbjct 182 RLVIAPWFLAPGFITDGVSTFARDNGIRMASPLGAHPLVAETVLDRYDE 230
>gi|342857342|ref|ZP_08713998.1| hypothetical protein MCOL_00650 [Mycobacterium colombiense CECT
3035]
gi|342134675|gb|EGT87841.1| hypothetical protein MCOL_00650 [Mycobacterium colombiense CECT
3035]
Length=238
Score = 281 bits (720), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 152/226 (68%), Positives = 173/226 (77%), Gaps = 3/226 (1%)
Query 48 LVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGA--AVV 105
LVLTAHGS+DPRS ANA A+A RLA MRP LDVR+AF ELN+PN VDVL A AVV
Sbjct 4 LVLTAHGSRDPRSGANAEAVADRLALMRPDLDVRLAFLELNAPNFVDVLAGLPDARRAVV 63
Query 106 TPLLLADAYHARVDIPAQIASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTL 165
PLLLA AYHAR+DIP QIA H +RQA VLGED RLVS L ERL E GVS D L
Sbjct 64 APLLLASAYHARLDIPQQIADAG-AHGIRQADVLGEDERLVSVLRERLAEAGVSELDDDL 122
Query 166 GVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARR 225
GV+V+AIGSS+ AANART+ V +RLA GT+WA VTTAF TRPEAS+A A D+LRR GARR
Sbjct 123 GVMVVAIGSSNLAANARTAKVTTRLAAGTRWAGVTTAFATRPEASVARAADQLRRRGARR 182
Query 226 MVIAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRY 271
+VIAPW LAPG ++D V +AR+ GI MA PLGAH +VA T+ DRY
Sbjct 183 LVIAPWFLAPGFITDGVSNFARDNGIPMAAPLGAHRLVAETVLDRY 228
>gi|183983692|ref|YP_001851983.1| hypothetical protein MMAR_3712 [Mycobacterium marinum M]
gi|183177018|gb|ACC42128.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=237
Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 158/234 (68%), Positives = 188/234 (81%), Gaps = 0/234 (0%)
Query 48 LVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTP 107
LVLTAHGS+DPRS+ANARA+A R+ARMRP LDVR+AFCELNSP LV+VLN C G AVVTP
Sbjct 4 LVLTAHGSRDPRSSANARAVAARVARMRPDLDVRLAFCELNSPGLVEVLNGCSGDAVVTP 63
Query 108 LLLADAYHARVDIPAQIASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTLGV 167
LLLA+ YHA +DIPAQIASCR RVRQA+VLG D RLVS L +R+T LGVS FD LGV
Sbjct 64 LLLANGYHAGIDIPAQIASCRESLRVRQANVLGTDDRLVSVLRQRVTALGVSRFDDGLGV 123
Query 168 VVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARRMV 227
+V+AIGSS+ A N+ T+ V +LAEGT+WAAV TAF T P A+LA+A RLRR GA R+V
Sbjct 124 LVVAIGSSNAAVNSHTAQVGPKLAEGTRWAAVATAFATHPPAALAEAVSRLRRRGAHRVV 183
Query 228 IAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA 281
+APW LA G L DRV+ +A + G+AMA PLGAH +VA T+ DR+ QA AGR+AA
Sbjct 184 VAPWFLAHGRLPDRVQRFAADTGLAMAAPLGAHRLVAETVLDRFAQATAGRVAA 237
>gi|118468708|ref|YP_888801.1| hypothetical protein MSMEG_4529 [Mycobacterium smegmatis str.
MC2 155]
gi|118169995|gb|ABK70891.1| secreted protein [Mycobacterium smegmatis str. MC2 155]
Length=237
Score = 255 bits (652), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 137/233 (59%), Positives = 165/233 (71%), Gaps = 2/233 (0%)
Query 48 LVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTP 107
LVLTAHGS DPRS+ANA AIAG + R+ P +VRVAFCE N PNL DVL +VV P
Sbjct 3 LVLTAHGSADPRSSANAHAIAGHVRRLLPDTEVRVAFCEQNEPNLADVLTAVEAGSVVVP 62
Query 108 LLLADAYHARVDIPAQIASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTLGV 167
LLLA AYHAR+DIPA IA + G V QA VLG D RL+ + ERLT LGVS FD +LGV
Sbjct 63 LLLASAYHARIDIPALIA--QTGADVVQADVLGNDPRLLQVMRERLTALGVSRFDSSLGV 120
Query 168 VVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARRMV 227
V+ +GSSH AANART+ +A+ LAEGT+W AF T + S++ A +RLR GA R+V
Sbjct 121 VLTGVGSSHAAANARTAELAADLAEGTRWVGTHVAFATGQDPSVSRAVERLRARGATRLV 180
Query 228 IAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIA 280
IAPW LA G ++DRV YAR GI MA+PLG H +VAAT+ DRY +A+ R A
Sbjct 181 IAPWFLAHGRITDRVAEYARREGIPMAEPLGPHRLVAATVLDRYEEAIEARTA 233
>gi|296166241|ref|ZP_06848680.1| secreted protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295898425|gb|EFG77992.1| secreted protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=244
Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 148/237 (63%), Positives = 180/237 (76%), Gaps = 5/237 (2%)
Query 48 LVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRC--RGAAVV 105
LVLTAHGS+DPRS ANARA+A RL MRPGLDVR+AF EL++PN DVL+ + AVV
Sbjct 10 LVLTAHGSRDPRSGANARAVAERLRGMRPGLDVRLAFLELSAPNFADVLSGLPDKRDAVV 69
Query 106 TPLLLADAYHARVDIPAQIASCRVG-HRVRQASVLGEDIRLVSALHERLTELGVSPFDHT 164
TPLLLA AYHAR DIP QIA R G + +RQA VLGED RL++ L +RL E+GVSP D
Sbjct 70 TPLLLASAYHARRDIPGQIA--RAGAYGIRQADVLGEDDRLLAVLRDRLGEVGVSPLDDE 127
Query 165 LGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGAR 224
+GV+V+AIGSS+ ANART+ VA+RL+ GT+WA AF TRPEAS+ D RLR GAR
Sbjct 128 VGVMVVAIGSSNTDANARTARVAARLSAGTRWAGTAMAFATRPEASVEDTAARLRARGAR 187
Query 225 RMVIAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA 281
R+VIAPW LAPG+++D V YAR+ GIAMA PLGAH +VA T+ DR+ +A+A AA
Sbjct 188 RLVIAPWFLAPGLITDGVSTYARDNGIAMAPPLGAHRLVAETVLDRFDEALADHAAA 244
>gi|118618925|ref|YP_907257.1| hypothetical protein MUL_3654 [Mycobacterium ulcerans Agy99]
gi|118571035|gb|ABL05786.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=224
Score = 252 bits (644), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 147/223 (66%), Positives = 173/223 (78%), Gaps = 4/223 (1%)
Query 48 LVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTP 107
LVLTAHGS+DPRS+ANARA+A R+ARMRP LDVR+AFCELNSP LV+VLN C G AVVTP
Sbjct 4 LVLTAHGSRDPRSSANARAVAARVARMRPDLDVRLAFCELNSPGLVEVLNGCSGDAVVTP 63
Query 108 LLLADAYHARVDIPAQIASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTLGV 167
LLLA+ YHA +DIPAQIASCR RVRQA+VLG D RLVS L +R+T LGVS FD LGV
Sbjct 64 LLLANGYHAGIDIPAQIASCRESLRVRQANVLGTDDRLVSVLRQRVTALGVSRFDDGLGV 123
Query 168 VVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARRMV 227
+V+AIGSS+ A N+ T+ V +LAEGT+WAAV TAF T P A+LA+A RLRR GA R+V
Sbjct 124 LVVAIGSSNAAVNSHTAQVGPKLAEGTRWAAVATAFATHPPAALAEAVSRLRRRGAHRVV 183
Query 228 IAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDR 270
+APW LA G L DRV+ +A + G+AMA AHP V W R
Sbjct 184 VAPWFLAHGRLPDRVQRFAADTGLAMA----AHPWVRTVWWPR 222
>gi|240168736|ref|ZP_04747395.1| secreted protein [Mycobacterium kansasii ATCC 12478]
Length=238
Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 159/237 (68%), Positives = 181/237 (77%), Gaps = 5/237 (2%)
Query 48 LVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGA--AVV 105
L+LTAHGSKDPRSAANARA+A L R+RPGLDVR AF EL P +DV+ AVV
Sbjct 4 LILTAHGSKDPRSAANARAVAAELTRIRPGLDVRPAFLELAEPAFIDVVAGLPNGRPAVV 63
Query 106 TPLLLADAYHARVDIPAQIASCRVG-HRVRQASVLGEDIRLVSALHERLTELGVSPFDHT 164
TPLLLA AYHAR DIP QIA R G H VRQA VLGED+RLVS L ERL ELG+SP D
Sbjct 64 TPLLLASAYHARRDIPDQIA--RAGAHGVRQADVLGEDVRLVSVLRERLAELGISPLDRD 121
Query 165 LGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGAR 224
LGVVV+AIGSS+ AANART+ VA+ LA GT+WA T AF TRP+ S+ADA RLRR GAR
Sbjct 122 LGVVVVAIGSSNTAANARTAQVAAALAAGTRWAGATIAFATRPQPSVADAVARLRRRGAR 181
Query 225 RMVIAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA 281
R+VIAPW LAPG+++DRV YAR+ GI MAQPLGAH +VA T+ DRY QA+A AA
Sbjct 182 RLVIAPWFLAPGLITDRVWNYARDNGIPMAQPLGAHRLVAETLLDRYDQALAHHAAA 238
>gi|183983407|ref|YP_001851698.1| hypothetical protein MMAR_3418 [Mycobacterium marinum M]
gi|183176733|gb|ACC41843.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=239
Score = 242 bits (618), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 145/232 (63%), Positives = 176/232 (76%), Gaps = 5/232 (2%)
Query 48 LVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGA--AVV 105
LVLTAHGS+DPRSA NARA+A L RMRP LDVR+AF EL +PN V+VL + AVV
Sbjct 4 LVLTAHGSRDPRSADNARAVAAALRRMRPNLDVRLAFLELCAPNFVEVLAELPDSQRAVV 63
Query 106 TPLLLADAYHARVDIPAQIA-SCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHT 164
TPLLLA AYHAR DIP QIA S +G VR+A+VLGED RLVS L +RL E GVSP D
Sbjct 64 TPLLLASAYHARTDIPEQIARSGALG--VREAAVLGEDDRLVSVLRDRLAERGVSPRDRN 121
Query 165 LGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGAR 224
+GV+V+A+GSSH NART+ VA++L GT+WA T AF T P+ S+ADA +LR GAR
Sbjct 122 IGVLVVAVGSSHAPVNARTARVAAKLGAGTRWAGTTMAFATGPKPSVADAAAQLRASGAR 181
Query 225 RMVIAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQAVA 276
R+VIAPW LAPG+++DRV YA + IAMA+P+GAHP+VA T+ DRY QA+A
Sbjct 182 RLVIAPWFLAPGLITDRVWKYACDNDIAMARPMGAHPLVAQTVLDRYDQALA 233
>gi|126436066|ref|YP_001071757.1| cobalamin (vitamin B12) biosynthesis CbiX protein [Mycobacterium
sp. JLS]
gi|126235866|gb|ABN99266.1| cobalamin (vitamin B12) biosynthesis CbiX protein [Mycobacterium
sp. JLS]
Length=234
Score = 241 bits (616), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 137/234 (59%), Positives = 163/234 (70%), Gaps = 3/234 (1%)
Query 48 LVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTP 107
L+LTAHGS DPRSAA A+AGR+ R+RP LDVR AF E +P+L DVL+ G A V P
Sbjct 4 LILTAHGSVDPRSAAVTHAVAGRIRRLRPWLDVRAAFLEKCAPSLHDVLSET-GNATVVP 62
Query 108 LLLADAYHARVDIPAQIASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTLGV 167
LLADAYHARVDIPA I + VG VR A VLGED L+S RLTE GV P+D LGV
Sbjct 63 FLLADAYHARVDIPAVIDT--VGAPVRTAPVLGEDPALLSVARLRLTEAGVCPYDDELGV 120
Query 168 VVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARRMV 227
+V+A+GSS+P+ANARTSTVA LA+GT+WA AF T P A LA LR GARR+V
Sbjct 121 MVVAVGSSNPSANARTSTVAPALADGTRWAGTKVAFATGPHADLAGTAAALRDSGARRLV 180
Query 228 IAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA 281
I PW LA G ++DRV YA GI+MA+PLG+H +VAAT+ DR+ R AA
Sbjct 181 IVPWFLAHGRITDRVADYAAREGISMAEPLGSHNLVAATVLDRFDDVTETRAAA 234
>gi|118618153|ref|YP_906485.1| hypothetical protein MUL_2697 [Mycobacterium ulcerans Agy99]
gi|118570263|gb|ABL05014.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=239
Score = 241 bits (615), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 144/229 (63%), Positives = 173/229 (76%), Gaps = 5/229 (2%)
Query 48 LVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGA--AVV 105
LVLTAHGS+DPRSA NARA+A L RMRP LDVR+AF EL +PN VDVL + AVV
Sbjct 4 LVLTAHGSRDPRSADNARAVAAALRRMRPNLDVRLAFLELCAPNFVDVLAELPDSQRAVV 63
Query 106 TPLLLADAYHARVDIPAQIA-SCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHT 164
TPLLLA AYHAR DIP QIA S +G VR+A+VLGED RLVS L +RL E GVSP D
Sbjct 64 TPLLLASAYHARTDIPEQIARSGALG--VREAAVLGEDDRLVSVLRDRLAERGVSPRDRN 121
Query 165 LGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGAR 224
+GV+V+A+GSSH NART+ VA++L GT+WA T AF T P+ S+ADA +LR GAR
Sbjct 122 IGVLVVAVGSSHAPVNARTARVAAKLGAGTRWAGTTMAFATGPKPSVADAAAQLRASGAR 181
Query 225 RMVIAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQ 273
R+VIAPW LAPG+++DRV YA + IAMA+P+GAHP+VA T+ DRY Q
Sbjct 182 RLVIAPWFLAPGLITDRVWKYACDNDIAMARPMGAHPLVAQTVLDRYDQ 230
>gi|108800442|ref|YP_640639.1| cobalamin (vitamin B12) biosynthesis CbiX protein [Mycobacterium
sp. MCS]
gi|119869571|ref|YP_939523.1| cobalamin (vitamin B12) biosynthesis CbiX protein [Mycobacterium
sp. KMS]
gi|108770861|gb|ABG09583.1| cobalamin (vitamin B12) biosynthesis CbiX protein [Mycobacterium
sp. MCS]
gi|119695660|gb|ABL92733.1| cobalamin (vitamin B12) biosynthesis CbiX protein [Mycobacterium
sp. KMS]
Length=234
Score = 238 bits (607), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 136/234 (59%), Positives = 162/234 (70%), Gaps = 3/234 (1%)
Query 48 LVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTP 107
L+LTAHGS DPRSAA A+AGR+ R+RP LDVR AF E +P+L DVL+ G A V P
Sbjct 4 LILTAHGSVDPRSAAVTHAVAGRIRRLRPWLDVRAAFLEKCAPSLHDVLSET-GNATVVP 62
Query 108 LLLADAYHARVDIPAQIASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTLGV 167
LLADAYHARVDIPA I + VG VR A VLGED L+S RLTE GV P+D LGV
Sbjct 63 FLLADAYHARVDIPAVIDT--VGAPVRTAPVLGEDPALLSVARLRLTEAGVCPYDDELGV 120
Query 168 VVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARRMV 227
+V+A+GSS+ +ANARTSTVA LA+GT+WA AF T P A LA LR GARR+V
Sbjct 121 MVVAVGSSNRSANARTSTVAPALADGTRWAGTKVAFATGPHADLAGTAAALRESGARRLV 180
Query 228 IAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA 281
I PW LA G ++DRV YA GI+MA+PLG+H +VAAT+ DR+ R AA
Sbjct 181 IVPWFLAHGRITDRVADYAAREGISMAEPLGSHNLVAATVLDRFDDVTETRAAA 234
>gi|333990157|ref|YP_004522771.1| hypothetical protein JDM601_1517 [Mycobacterium sp. JDM601]
gi|333486125|gb|AEF35517.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=231
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 135/234 (58%), Positives = 159/234 (68%), Gaps = 3/234 (1%)
Query 48 LVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTP 107
+VLTAHGS+DPRSAAN RAIAG L R+ P DVRVAFCE N+PNL DVL A+V P
Sbjct 1 MVLTAHGSRDPRSAANTRAIAGHLRRVAPEHDVRVAFCEHNAPNLRDVLADVGDDAIVVP 60
Query 108 LLLADAYHARVDIPAQIASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTLGV 167
LLA AYHAR+DIP I G VR A LGED RLV L ERLT G S FD LGV
Sbjct 61 FLLASAYHARIDIPGMIEES--GAAVRVAPTLGEDRRLVQVLGERLTSAGASRFDPQLGV 118
Query 168 VVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARRMV 227
V +A+GSS AANA T+ VA RL+ GT+WA V AF T S+ A +RL+ GA R++
Sbjct 119 VAVAVGSSDAAANAGTARVADRLSRGTRWAGVEMAFATMA-GSVPQAVERLQARGAERLM 177
Query 228 IAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA 281
IAPW LA G ++D + YAR GI MA+PLGAH +VAAT+ DR A+A R+AA
Sbjct 178 IAPWFLAHGTITDGIAEYARREGIPMAEPLGAHRLVAATVLDRVETALADRLAA 231
>gi|145223271|ref|YP_001133949.1| cobalamin (vitamin B12) biosynthesis CbiX protein [Mycobacterium
gilvum PYR-GCK]
gi|315443731|ref|YP_004076610.1| hypothetical protein Mspyr1_21210 [Mycobacterium sp. Spyr1]
gi|145215757|gb|ABP45161.1| cobalamin (vitamin B12) biosynthesis CbiX protein [Mycobacterium
gilvum PYR-GCK]
gi|315262034|gb|ADT98775.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length=234
Score = 228 bits (582), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 135/235 (58%), Positives = 157/235 (67%), Gaps = 4/235 (1%)
Query 48 LVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRG-AAVVT 106
L+LTAHGS DPRSAA AR+I + R+RP LD R+AFCE NSPNL DVL G VV
Sbjct 3 LILTAHGSADPRSAATARSIVECIRRLRPDLDARIAFCEQNSPNLRDVLADLPGRHGVVV 62
Query 107 PLLLADAYHARVDIPAQIASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTLG 166
PLLLADAYHARVDIP IA G VRQA+VLGED RL+ L +RL GVS D +G
Sbjct 63 PLLLADAYHARVDIPQMIADS--GADVRQAAVLGEDERLIHVLRQRLEHAGVSRLDPRVG 120
Query 167 VVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARRM 226
++V A+GSS AANA T VA L T+WAA TTAF T P+ SL DA LR GA R+
Sbjct 121 ILVTAVGSSRAAANANTEAVARELTLTTRWAA-TTAFATGPQPSLTDAAAHLRALGASRL 179
Query 227 VIAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA 281
VIAPW LA G ++DRV +AR I M+ PLGAH VA T+ DR+ A+ R AA
Sbjct 180 VIAPWFLAHGRITDRVAAFARAHDIPMSAPLGAHRQVAETVLDRFDAALVHRAAA 234
>gi|120404817|ref|YP_954646.1| cobalamin (vitamin B12) biosynthesis CbiX protein [Mycobacterium
vanbaalenii PYR-1]
gi|119957635|gb|ABM14640.1| cobalamin (vitamin B12) biosynthesis CbiX protein [Mycobacterium
vanbaalenii PYR-1]
Length=234
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 127/225 (57%), Positives = 149/225 (67%), Gaps = 4/225 (1%)
Query 48 LVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRG-AAVVT 106
L+LTAHGS DPRSA ARAI + +RP LD R+AFCE +SPNL D L R AVV
Sbjct 3 LILTAHGSADPRSAQTARAIVDCIRCLRPTLDARIAFCEQSSPNLRDELAALRRRQAVVV 62
Query 107 PLLLADAYHARVDIPAQIASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTLG 166
PLLLADAYHARVDIP IA+ G VRQA VLGED RL+ L +RL GVS D ++G
Sbjct 63 PLLLADAYHARVDIPEMIAAS--GADVRQAGVLGEDDRLIHVLRQRLEHAGVSRLDPSVG 120
Query 167 VVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARRM 226
V+V A+GSS PAAN RT+TVA L T+W A T P S A+A D LRR GA R+
Sbjct 121 VIVTAVGSSRPAANVRTATVARELTLTTRWTATTAFATG-PHPSPAEAADELRRRGATRL 179
Query 227 VIAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRY 271
VIAPW LA G ++DRV +A I M+ PLGAH VA T+ DR+
Sbjct 180 VIAPWFLAHGRITDRVADFAAAQRIPMSAPLGAHRQVAETVLDRF 224
>gi|41408135|ref|NP_960971.1| hypothetical protein MAP2037 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396490|gb|AAS04354.1| hypothetical protein MAP_2037 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=183
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/163 (69%), Positives = 127/163 (78%), Gaps = 7/163 (4%)
Query 48 LVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGA--AVV 105
LVLTAHGS+DPRSAANA A+A RL RMRPGLDVR+AF ELN+PN VDVL + AVV
Sbjct 4 LVLTAHGSRDPRSAANAEAVADRLRRMRPGLDVRLAFLELNAPNFVDVLAGLPDSRRAVV 63
Query 106 TPLLLADAYHARVDIPAQIASCRVGHR-VRQASVLGEDIRLVSALHERLTELGVSPFDHT 164
PLLLA AYHAR+DIP QIA R G R +RQA VLGED RLV+ L RL E+GVSP D
Sbjct 64 APLLLASAYHARLDIPEQIA--RAGARGIRQADVLGEDDRLVAVLRGRLAEIGVSPLDDD 121
Query 165 LGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRP 207
LGV+V+AIGSS+ AANART+ VASRLA GT+WA TTA +RP
Sbjct 122 LGVMVVAIGSSNIAANARTAKVASRLAAGTRWACATTA--SRP 162
>gi|169628748|ref|YP_001702397.1| hypothetical protein MAB_1658c [Mycobacterium abscessus ATCC
19977]
gi|169240715|emb|CAM61743.1| Conserved hypothetical protein (cobalamin biosynthesis?) [Mycobacterium
abscessus]
Length=231
Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 110/231 (48%), Positives = 146/231 (64%), Gaps = 10/231 (4%)
Query 46 PQLVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVV 105
P LV AHGS+D R A NAR + ++ +RP LDVR+AF EL+ PNL+DVL G AVV
Sbjct 4 PTLVAVAHGSRDARFAQNARRVVRQVRSLRPDLDVRLAFLELSEPNLLDVLGDLSGDAVV 63
Query 106 TPLLLADAYHARVDIPAQIASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTL 165
PLLL+DAYHAR+D+P +++ RV QA VLG D RL++ R+TELG++ H
Sbjct 64 VPLLLSDAYHARIDLPTVLSAAPARLRVMQACVLGADNRLLALARRRVTELGIA---HP- 119
Query 166 GVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARR 225
GV++ A+GSS AN RT +A+ QW TT F T SLA+A + LR GA
Sbjct 120 GVILSAVGSSDSTANTRTRALAA------QWPISTTVFATGDPTSLAEAAESLRARGATD 173
Query 226 MVIAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQAVA 276
+V+APW L+PG+L DRVR A + + +A PLGA +VA + RY A+A
Sbjct 174 IVVAPWFLSPGLLLDRVRAEAAQLDMPVAAPLGADRLVADVVVQRYASAIA 224
>gi|111018265|ref|YP_701237.1| hypothetical protein RHA1_ro01255 [Rhodococcus jostii RHA1]
gi|110817795|gb|ABG93079.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=251
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/235 (46%), Positives = 142/235 (61%), Gaps = 9/235 (3%)
Query 48 LVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRC----RGAA 103
L+ AHGS+DPRSA A L RP LDVR+ F +LN+P++ V++ +A
Sbjct 4 LIAVAHGSRDPRSARVVAAAVSALRAKRPDLDVRLCFLDLNAPSVDQVIDTVAAEGHSSA 63
Query 104 VVTPLLLADAYHARVDIPAQIASCRVGH---RVRQASVLGEDIRLVSALHERLTELGVSP 160
VV P+LL A+HARVD+PA + + R+ H VRQA VLG D RLV A+ +R+ E G S
Sbjct 64 VVVPMLLGSAFHARVDLPALLDAARLRHPHLHVRQADVLGHDARLVEAVRDRIGEAGGSA 123
Query 161 FDHTLGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRR 220
+ LG+V+ A+GSS PAAN RT +A + GT+W+ T F T E ++ A LR+
Sbjct 124 RESGLGIVLAAVGSSDPAANDRTRELAGSVVAGTRWSGAVTCFATSAEPTVQQAISTLRQ 183
Query 221 HGARRMVIAPWLLAPGILSDRVRGYAREA--GIAMAQPLGAHPMVAATMWDRYRQ 273
GA R+VIAPW LAPG+L+DR+ A GI A +G HP + M DRY Q
Sbjct 184 AGAERVVIAPWFLAPGLLTDRLSRAAESCGPGITYAATIGPHPRLLDVMLDRYSQ 238
>gi|226307237|ref|YP_002767197.1| ferrochelatase [Rhodococcus erythropolis PR4]
gi|226186354|dbj|BAH34458.1| putative ferrochelatase [Rhodococcus erythropolis PR4]
Length=251
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/235 (45%), Positives = 140/235 (60%), Gaps = 9/235 (3%)
Query 48 LVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRC----RGAA 103
L+ AHGS+DPRSA A L RP LDVR+AF +LN+P++ VL+ A
Sbjct 4 LIAVAHGSRDPRSARVIAAAVAALREARPDLDVRLAFLDLNAPSIDQVLDGVAHDGHTHA 63
Query 104 VVTPLLLADAYHARVDIPAQIASCRVGH---RVRQASVLGEDIRLVSALHERLTELGVSP 160
VV P+LL +A+HARVD+P +A+ H V QA VLG D RL+ A+ ER+ E G P
Sbjct 64 VVVPMLLGNAFHARVDLPGLLAAAATRHPQLTVFQADVLGRDARLIEAVRERILEAGARP 123
Query 161 FDHTLGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRR 220
D ++GV + A+GSS ANA T+ +AS L GT W+ V F T E + A A L +
Sbjct 124 DDPSVGVALAAVGSSDARANAATAELASTLLSGTNWSGVRICFATSAEPTAAQAISALEQ 183
Query 221 HGARRMVIAPWLLAPGILSDRVRGYAREAG--IAMAQPLGAHPMVAATMWDRYRQ 273
+GA R+V+APW LAPG+L+DR+ A A+ +G H ++ TM DRYRQ
Sbjct 184 NGAERVVVAPWFLAPGLLTDRLSAAAATVCPRARFAETIGGHSLLIETMIDRYRQ 238
>gi|229493164|ref|ZP_04386956.1| secreted protein [Rhodococcus erythropolis SK121]
gi|229319895|gb|EEN85724.1| secreted protein [Rhodococcus erythropolis SK121]
Length=251
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/235 (45%), Positives = 141/235 (60%), Gaps = 9/235 (3%)
Query 48 LVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRC----RGAA 103
L+ AHGS+DPRSA A L + RP LDVR+AF +LN+P++ VL+ A
Sbjct 4 LIAVAHGSRDPRSARVIAAAVAALRQARPDLDVRLAFLDLNAPSIDQVLDGVAHDGHTHA 63
Query 104 VVTPLLLADAYHARVDIPAQIASCRVGH---RVRQASVLGEDIRLVSALHERLTELGVSP 160
VV P+LL +A+HARVD+P +A+ H V QA VLG D RL+ A+ ER+ E G P
Sbjct 64 VVVPMLLGNAFHARVDLPGLLAAAATRHPQLTVFQADVLGRDARLIEAVRERILEAGARP 123
Query 161 FDHTLGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRR 220
D ++GV + A+GSS ANA T+ +AS L GT W+ V F T E ++A A L +
Sbjct 124 DDPSVGVALAAVGSSDARANAATAELASTLLGGTNWSGVRICFATSAEPTVAQAISALEQ 183
Query 221 HGARRMVIAPWLLAPGILSDRVRGYAREAG--IAMAQPLGAHPMVAATMWDRYRQ 273
GA R+V+APW LAPG+L+DR+ A A A +G H ++ TM DRYRQ
Sbjct 184 DGAERVVVAPWFLAPGLLTDRLSAAAATACPRARFADTIGGHSLLIETMIDRYRQ 238
>gi|226360389|ref|YP_002778167.1| ferrochelatase [Rhodococcus opacus B4]
gi|226238874|dbj|BAH49222.1| putative ferrochelatase [Rhodococcus opacus B4]
Length=251
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/235 (45%), Positives = 139/235 (60%), Gaps = 9/235 (3%)
Query 48 LVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLN----RCRGAA 103
L+ AHGS+DPRSA A L RP LDVR+ F +LN+P++ V++ +A
Sbjct 4 LIAVAHGSRDPRSARVVAAAVSALRERRPDLDVRLCFLDLNAPSVDQVIDAVAAEGHSSA 63
Query 104 VVTPLLLADAYHARVDIPAQIASCRVGH---RVRQASVLGEDIRLVSALHERLTELGVSP 160
VV P+LL A+HARVD+PA + + R+ H VRQA VLG D RLV A+ +R+ E S
Sbjct 64 VVVPMLLGSAFHARVDLPALLDAARLRHPHLHVRQADVLGHDARLVEAVRDRIGEAVGST 123
Query 161 FDHTLGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRR 220
+ LG+V+ A+GSS PAAN T +A + GT+W+ + F T E S+ A LR
Sbjct 124 GESGLGIVLAAVGSSDPAANDHTRALAGAVVAGTEWSGAVSCFATAAEPSVQQAISTLRH 183
Query 221 HGARRMVIAPWLLAPGILSDRVRGYAREA--GIAMAQPLGAHPMVAATMWDRYRQ 273
GA R+VIAPW LAPG+L+DR+ A GI A +G HP + M DRY Q
Sbjct 184 KGAERIVIAPWFLAPGLLTDRLSRAAESCGPGITYAATIGPHPRLLDVMLDRYSQ 238
>gi|312140302|ref|YP_004007638.1| cobalamin biosynthesis protein cbix [Rhodococcus equi 103S]
gi|311889641|emb|CBH48958.1| cobalamin biosynthesis protein CbiX [Rhodococcus equi 103S]
Length=256
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/245 (44%), Positives = 144/245 (59%), Gaps = 12/245 (4%)
Query 41 SGTIAPQLVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLN--- 97
S T+ P L+ AHGS+DPRSA A + RP +DVR+ F +LN+P++ V++
Sbjct 4 SDTVTP-LIAVAHGSRDPRSARVVTAAVAAIRAQRPDVDVRLCFLDLNTPSVDQVVDAVA 62
Query 98 -RCRGAAVVTPLLLADAYHARVDIPAQIASCRVGH---RVRQASVLGEDIRLVSALHERL 153
AVV PLLL A+HARVD+P +A+ R H + Q+ VLG D RLV A+ +R+
Sbjct 63 AEGHSTAVVVPLLLGSAFHARVDLPGILAAARARHPQLTLVQSDVLGHDRRLVDAVRDRI 122
Query 154 TELGVSPFDHT-LGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLA 212
TE GV+ D T GVV+ A+GSS AN RT +A LA+G W A F T E ++
Sbjct 123 TETGVATTDDTRAGVVLAAVGSSDSRANDRTRALAGVLADGNLW-ATAACFATSAEPTVG 181
Query 213 DATDRLRRHGARRMVIAPWLLAPGILSDRVRGYAREAG--IAMAQPLGAHPMVAATMWDR 270
A +LR G R+VIAPW LAPG L+DR+ A +A + A+ +GAH VA DR
Sbjct 182 QAISQLRSRGVERIVIAPWFLAPGRLTDRLGAAALDAAPDVVFAETIGAHRNVAEVALDR 241
Query 271 YRQAV 275
YR A+
Sbjct 242 YRTAL 246
>gi|325677124|ref|ZP_08156793.1| secreted protein [Rhodococcus equi ATCC 33707]
gi|325552109|gb|EGD21802.1| secreted protein [Rhodococcus equi ATCC 33707]
Length=249
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/237 (44%), Positives = 139/237 (59%), Gaps = 10/237 (4%)
Query 48 LVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLN----RCRGAA 103
L+ AHGS+DPRSA A + RP +DVR+ F +LN+P++ V++ A
Sbjct 4 LIAVAHGSRDPRSARVVTAAVAAIRAQRPDVDVRLCFLDLNTPSVDQVVDAVAAEGHSTA 63
Query 104 VVTPLLLADAYHARVDIPAQIASCRVGH---RVRQASVLGEDIRLVSALHERLTELGVSP 160
VV PLLL A+HARVD+P +A+ R H + Q+ VLG D RLV A+ +R+TE GV+
Sbjct 64 VVVPLLLGSAFHARVDLPGILAAARARHPQLTLVQSDVLGHDRRLVDAVRDRITETGVAT 123
Query 161 FDHTLGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRR 220
D GVV+ A+GSS AN RT +A LA+G W A F T E ++ A +LR
Sbjct 124 DDTRAGVVLAAVGSSDSRANDRTRALAGVLADGNLW-ATAACFATSAEPTVGQAISQLRS 182
Query 221 HGARRMVIAPWLLAPGILSDRVRGYAREAG--IAMAQPLGAHPMVAATMWDRYRQAV 275
G R+VIAPW LAPG L+DR+ A +A + A+ +GAH VA DRYR A+
Sbjct 183 RGVERIVIAPWFLAPGRLTDRLGAAALDAAPDVVFAETIGAHRNVAEVALDRYRTAL 239
>gi|134098058|ref|YP_001103719.1| cobalamin (vitamin B12) biosynthesis CbiX protein [Saccharopolyspora
erythraea NRRL 2338]
gi|133910681|emb|CAM00794.1| cobalamin (vitamin B12) biosynthesis CbiX protein [Saccharopolyspora
erythraea NRRL 2338]
Length=254
Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 107/238 (45%), Positives = 132/238 (56%), Gaps = 9/238 (3%)
Query 48 LVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRG----AA 103
LV AHGS+DPRSAA A+ + MRP LDVR AF +L++P L DVL G A
Sbjct 5 LVAVAHGSRDPRSAATIHALMDVVRAMRPDLDVRTAFLDLSAPRLGDVLGAVHGDGHREA 64
Query 104 VVTPLLLADAYHARVDIPAQIASCRVG---HRVRQASVLGEDIRLVSALHERLTELGVSP 160
VV PLLL A+HARVD+PA +A + RV + VLG D RL A ERL + GV
Sbjct 65 VVVPLLLGRAFHARVDVPAAVADVQQRLPRFRVHTSDVLGPDSRLDEAAWERLAQTGVRA 124
Query 161 FDHTLGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRR 220
D LGVV+ GSSH AN + VA+R T WA AF + + A LR
Sbjct 125 DDPELGVVLAGAGSSHDPANRLVADVAARWQARTSWAGAVAAFAAAADPDVPAAVADLRA 184
Query 221 HGARRMVIAPWLLAPGILSDRVRGYARE--AGIAMAQPLGAHPMVAATMWDRYRQAVA 276
GARR +A W LAPG+L DR+ ARE +A+P+ HP VA + RY A+A
Sbjct 185 RGARRFAVASWFLAPGLLPDRIIRLAREHTGEPVLAEPMADHPGVAELVLQRYADALA 242
>gi|302528871|ref|ZP_07281213.1| predicted protein [Streptomyces sp. AA4]
gi|302437766|gb|EFL09582.1| predicted protein [Streptomyces sp. AA4]
Length=245
Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 100/244 (41%), Positives = 138/244 (57%), Gaps = 15/244 (6%)
Query 44 IAPQLVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRG-- 101
+ P LV AHGS+DPRSAA RA+ + GLDV +F +L+ P + DVL +
Sbjct 1 MTPPLVAVAHGSRDPRSAATVRALVDVVRAQASGLDVHESFLDLSEPRVTDVLRKLYAYG 60
Query 102 --AAVVTPLLLADAYHARVDIPAQI----ASCRVGHRVRQASVLGEDIRLVSALHERLTE 155
+AVV PLLL A+HARVD+PA + A C G R++ + VLG D L + +RL
Sbjct 61 HRSAVVVPLLLGSAFHARVDLPALVDEVTAECP-GFRIQVSDVLGADPALQAVALDRLA- 118
Query 156 LGVSPFDHTLGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADAT 215
G T GV++ A+GSS+P ANA + +A+R E V+ AF + + + A
Sbjct 119 -GARRRGGT-GVLLSAVGSSNPEANAVVAGLATRW-EKRLGMPVSEAFASAAQPDIPAAA 175
Query 216 DRLRRHGARRMVIAPWLLAPGILSDRVRGYAREA--GIAMAQPLGAHPMVAATMWDRYRQ 273
RLR G R +V+A W LAPG+L DR+ AREA G +A+PL P VA + RY
Sbjct 176 ARLRERGVRHLVVASWFLAPGLLPDRIASLAREADPGAFIAEPLADDPRVADVVIGRYAA 235
Query 274 AVAG 277
A++G
Sbjct 236 AISG 239
>gi|337768695|emb|CCB77408.1| conserved protein of unknown function [Streptomyces cattleya
NRRL 8057]
Length=253
Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 102/244 (42%), Positives = 134/244 (55%), Gaps = 10/244 (4%)
Query 45 APQLVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAA- 103
+P L++ AHGS+DPR AA A+ R+ RPGL V AF + P + V+ R G
Sbjct 3 SPVLLVVAHGSRDPRHAATVHALCERVRSRRPGLRVETAFLDHCVPGVDQVIGRLAGEGV 62
Query 104 ---VVTPLLLADAYHARVDIPAQIASCRVGH---RVRQASVLGEDIRLVSALHERLTELG 157
V PLLL A+HA+ DIPA + H +RQA VLG L +AL RL E G
Sbjct 63 REVVALPLLLTRAFHAKSDIPAVLRLAAARHPNMTMRQAQVLGPSPLLTAALERRLREAG 122
Query 158 VSPFDH-TLGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATD 216
V P + G+V+ + GS+ P A A + +A R T W AV F + DA
Sbjct 123 VDPAERGGTGIVLASAGSTDPEAIAVIAEIA-REWRRTGWCAVRPTFASASLPRTQDAVR 181
Query 217 RLRRHGARRMVIAPWLLAPGILSDRVRGYAREAGI-AMAQPLGAHPMVAATMWDRYRQAV 275
LR G RR+ +AP+++APG L DR+ AREAG A+A LGA P VA + +RYRQA
Sbjct 182 ALRALGVRRIAVAPYVIAPGFLPDRIVRGAREAGADAVAGALGAAPEVARLVLERYRQAA 241
Query 276 AGRI 279
AGR+
Sbjct 242 AGRL 245
>gi|345002831|ref|YP_004805685.1| cobalamin (vitamin B12) biosynthesis CbiX protein [Streptomyces
sp. SirexAA-E]
gi|344318457|gb|AEN13145.1| cobalamin (vitamin B12) biosynthesis CbiX protein [Streptomyces
sp. SirexAA-E]
Length=250
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/238 (40%), Positives = 132/238 (56%), Gaps = 10/238 (4%)
Query 45 APQLVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCR---- 100
AP L++ AHGS+DPR AA A+ R+ +RPGL V F E N+P++ VL R
Sbjct 3 APVLLVIAHGSRDPRHAATVHALTARVRALRPGLRVETGFLEFNAPSVPRVLERLAADGA 62
Query 101 GAAVVTPLLLADAYHARVDIPAQIASCRV---GHRVRQASVLGEDIRLVSALHERLTELG 157
G V PLLL A+HA+ DIP+ + R R+RQA VLG L +AL ERL E G
Sbjct 63 GEVVALPLLLTRAFHAKTDIPSVLHEARTRLPQLRIRQADVLGPSPLLNAALEERLYEAG 122
Query 158 VSPFDHT-LGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATD 216
+SP D + G+V+ + GS+ P A A + +A L T W AV AF + +A
Sbjct 123 LSPADKSSTGLVLASAGSTDPEAIAVIAEIARELRH-TGWCAVRPAFASASLPRTEEAVR 181
Query 217 RLRRHGARRMVIAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQA 274
LR G RR+ +AP+++APG L DR+ A A + ++ LG P +A + RY +A
Sbjct 182 DLRSEGVRRVAVAPYVIAPGRLPDRIAAGAAGADV-LSGVLGPSPALARLLLARYAEA 238
>gi|302541800|ref|ZP_07294142.1| putative secreted protein [Streptomyces hygroscopicus ATCC 53653]
gi|302459418|gb|EFL22511.1| putative secreted protein [Streptomyces himastatinicus ATCC 53653]
Length=250
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/243 (42%), Positives = 132/243 (55%), Gaps = 10/243 (4%)
Query 45 APQLVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNR--CRGA 102
AP L+L AHGS+DPR AA A+ R+ +RPGL V +F E N+P + V++R GA
Sbjct 3 APTLLLVAHGSRDPRHAATVDALCARVRSLRPGLRVEPSFLEFNAPRVGQVVDRLAAEGA 62
Query 103 --AVVTPLLLADAYHARVDIPAQIASCRVGH---RVRQASVLGEDIRLVSALHERLTELG 157
+ PLLL A+HA+ DIPA + H VRQA VLG LV AL RL E G
Sbjct 63 DEVIALPLLLTRAFHAKADIPAVLREATARHPRLTVRQADVLGPSPLLVEALEHRLYEAG 122
Query 158 VSPFD-HTLGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATD 216
+ P D H GVV+ + GS+ P A A + +A R T W AV AF + DA
Sbjct 123 LHPGDRHRTGVVLASAGSTDPEAIAVIAEIA-REWRHTGWCAVRPAFASASLPRTEDAVR 181
Query 217 RLRRHGARRMVIAPWLLAPGILSDRVRGYAREAGI-AMAQPLGAHPMVAATMWDRYRQAV 275
LR G R+ +AP+++APG L DR+ A AG +A LG P +A + RY +A
Sbjct 182 ALRAEGVERVAVAPYVIAPGRLPDRIAHGAEAAGADTLADVLGPAPELARLLLTRYDEAR 241
Query 276 AGR 278
A R
Sbjct 242 AAR 244
>gi|256375369|ref|YP_003099029.1| cobalamin (vitamin B12) biosynthesis CbiX protein [Actinosynnema
mirum DSM 43827]
gi|255919672|gb|ACU35183.1| cobalamin (vitamin B12) biosynthesis CbiX protein [Actinosynnema
mirum DSM 43827]
Length=238
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 113/232 (49%), Positives = 130/232 (57%), Gaps = 6/232 (2%)
Query 51 TAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRG----AAVVT 106
AHGS+DPRSAA + G + +RP LDVR +F EL++P L DVL R AVV
Sbjct 3 VAHGSRDPRSAAVVNELLGVVRALRPELDVRASFLELSAPRLPDVLRAVRADGHREAVVV 62
Query 107 PLLLADAYHARVDIPAQIASCRV-GHRVRQASVLGEDIRLVSALHERLTELGVSPFDHTL 165
PLLL AYHARVD+P+ +A V G V A VLG D RL SA RL E GV D +
Sbjct 63 PLLLGRAYHARVDVPSAVAEAAVLGLDVAIADVLGPDPRLESAALRRLAEAGVGFGDRSW 122
Query 166 GVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGARR 225
GVV+ A GSSH ANA A R A G WA V AF A A RLR GARR
Sbjct 123 GVVLAAAGSSHARANAVVRATARRWAAGAGWAGVEPAFAASAAPDAAVAAARLRAAGARR 182
Query 226 MVIAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAG 277
+ +A W LAPG+L DRV G A +A PLGA P VA + RY A G
Sbjct 183 VAVASWFLAPGLLPDRVAGLV-GADAVVAAPLGADPEVAELVLHRYAGARVG 233
>gi|302557791|ref|ZP_07310133.1| secreted protein [Streptomyces griseoflavus Tu4000]
gi|302475409|gb|EFL38502.1| secreted protein [Streptomyces griseoflavus Tu4000]
Length=250
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/239 (39%), Positives = 127/239 (54%), Gaps = 6/239 (2%)
Query 43 TIAPQLVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCR-- 100
T P L+L +HGS+DPR AA A+ R+ +RPGL V AF E ++P + L R
Sbjct 8 TAEPALLLVSHGSRDPRHAATVWALTDRIRLLRPGLTVAPAFLEFDTPGVAGALERLERA 67
Query 101 --GAAVVTPLLLADAYHARVDIPAQIASCRVGHRVRQASVLGEDIRLVSALHERLTELGV 158
AAV PLLL AYHA+ D+PA +A G +VRQA+VLG LV A+ RL E G+
Sbjct 68 GTTAAVAVPLLLTRAYHAKTDLPAALAEAG-GSQVRQAAVLGGSPLLVRAVERRLFEAGL 126
Query 159 SPFDHTLGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRL 218
SP D + VVLA S + A+R W AV AF+T P L
Sbjct 127 SPADRSTTAVVLAGAGSRDPEAIESVGAAARELRRAGWRAVRPAFVTGPLPRPGTVVREL 186
Query 219 RRHGARRMVIAPWLLAPGILSDRV-RGYAREAGIAMAQPLGAHPMVAATMWDRYRQAVA 276
R G RR+ +AP++LAPG+L DR+ ++ PLG P +A + +R+ ++ A
Sbjct 187 RARGVRRVAVAPYVLAPGLLPDRIAAEAVAARAEVLSAPLGDAPELARLVTERWLESSA 245
>gi|29828679|ref|NP_823313.1| hypothetical protein SAV_2137 [Streptomyces avermitilis MA-4680]
gi|29605783|dbj|BAC69848.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length=245
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/234 (41%), Positives = 126/234 (54%), Gaps = 7/234 (2%)
Query 46 PQLVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAV- 104
P L++ AHGS+DPR AA A+ R+ MRPGL V F + N P++ VL V
Sbjct 4 PVLLVIAHGSRDPRHAATVHALVRRVRAMRPGLRVETGFLDFNVPSVNGVLESLAAEGVR 63
Query 105 ---VTPLLLADAYHARVDIPAQIASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPF 161
PLLL A+HA+ DIPA + R+RQA VLG L +AL RL E G++P
Sbjct 64 EVVALPLLLTRAFHAKADIPAVLREAPSRLRIRQAEVLGPSPFLTAALERRLYEAGLTPA 123
Query 162 DH-TLGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRR 220
D + GVV+ + GS+ P A A +A R T W AV AF + DA LR
Sbjct 124 DRPSTGVVLASAGSTDPEAIAVIGDIA-REWRRTGWCAVRPAFASASLPRTEDAVRELRA 182
Query 221 HGARRMVIAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQA 274
G R+ +AP++LAPG L DR+ A EA + ++ LG P VA + +RY +A
Sbjct 183 LGCERIAVAPYVLAPGFLPDRIARGAAEADV-LSDVLGPAPEVAHVLLNRYDEA 235
>gi|328885957|emb|CCA59196.1| Sirohydrochlorin ferrochelatase [Streptomyces venezuelae ATCC
10712]
Length=247
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/241 (41%), Positives = 132/241 (55%), Gaps = 8/241 (3%)
Query 46 PQLVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAV- 104
P L++ AHGS+DPR AA +A+ R +RPGL V AF + N P + VL+R V
Sbjct 4 PVLLVVAHGSRDPRHAATVQALVRRAGALRPGLRVETAFLDFNLPTVPGVLDRLAADGVR 63
Query 105 ---VTPLLLADAYHARVDIPAQIASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPF 161
PLLL A+HA+ DIPA + R+RQA VLG L++A+ RL E G++P
Sbjct 64 DVVALPLLLTRAFHAKADIPAVLRQAPPSLRIRQAEVLGPSPLLIAAVERRLYEAGLAPG 123
Query 162 DH-TLGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRR 220
D T GVV+ + GS+ P A A + A L T W +V AF + DA LR
Sbjct 124 DKSTTGVVLASAGSTDPEAIAVIAETARELRR-TGWCSVRPAFASASLPRTEDAVRALRT 182
Query 221 H-GARRMVIAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRI 279
G RR+ +AP+++APG L DR+ A EA + +A LG P +A + +RY A A R
Sbjct 183 DPGVRRVAVAPYVIAPGRLPDRIAAGATEADV-LAGVLGPSPELARLLLERYDGAHAARP 241
Query 280 A 280
A
Sbjct 242 A 242
>gi|300788498|ref|YP_003768789.1| cobalamin biosynthesis-related protein [Amycolatopsis mediterranei
U32]
gi|299798012|gb|ADJ48387.1| cobalamin biosynthesis-related protein [Amycolatopsis mediterranei
U32]
gi|340530103|gb|AEK45308.1| cobalamin biosynthesis-related protein [Amycolatopsis mediterranei
S699]
Length=245
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/244 (41%), Positives = 135/244 (56%), Gaps = 15/244 (6%)
Query 44 IAPQLVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRG-- 101
+ P LV AHGS+DPRSAA RA+ + PG +V +F +L+ P + DVL +
Sbjct 1 MTPPLVAVAHGSRDPRSAATVRALVDVVRTQAPGAEVHESFLDLSEPRVTDVLRKLHADG 60
Query 102 --AAVVTPLLLADAYHARVDIPAQI----ASCRVGHRVRQASVLGEDIRLVSALHERLTE 155
AVV PLLL A+HARVD+PA I A C G RV+ + VLG D L + +R
Sbjct 61 HRTAVVVPLLLGSAFHARVDLPALIDEVVADCP-GFRVQVSDVLGADPALEAVALDR--- 116
Query 156 LGVSPFDHTLGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADAT 215
L +P GV+V A+GSS+ +ANA +++ASR E V+ AF + + + A
Sbjct 117 LAAAPRRGGTGVIVSAVGSSNASANAVVASLASRWEE-RLGVPVSEAFASATQPDIPAAA 175
Query 216 DRLRRHGARRMVIAPWLLAPGILSDRVRGYAREAG--IAMAQPLGAHPMVAATMWDRYRQ 273
LR G R +V+A W LAPG+L DR+ AREA +A+PL P VA + RY
Sbjct 176 AALRARGVRHLVVASWFLAPGLLPDRIAALAREADPKAFIAEPLADDPRVADVVVSRYAS 235
Query 274 AVAG 277
AV G
Sbjct 236 AVTG 239
>gi|329940250|ref|ZP_08289532.1| secreted protein [Streptomyces griseoaurantiacus M045]
gi|329301076|gb|EGG44972.1| secreted protein [Streptomyces griseoaurantiacus M045]
Length=246
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/241 (41%), Positives = 130/241 (54%), Gaps = 7/241 (2%)
Query 46 PQLVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAV- 104
P L++ AHGS+DPR AA A+ R+ +RPGL V F + N P++ VL V
Sbjct 5 PVLLVIAHGSRDPRHAATVHALVRRVRALRPGLRVETGFLDFNVPSVRGVLESLAAEGVR 64
Query 105 ---VTPLLLADAYHARVDIPAQIASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPF 161
PLLL A+HA+ DIPA + G R+RQA VLG L++ L RL E G+ P
Sbjct 65 DVVALPLLLTRAFHAKSDIPAVLRQAPPGLRIRQAEVLGPSPLLLTGLERRLYEAGLDPA 124
Query 162 DH-TLGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRR 220
D + GVV+ + GSS P A A + +A R T W AV AF + DA LR
Sbjct 125 DKSSTGVVLASAGSSDPEAIAVIADIA-REWRHTGWCAVRPAFASAALPRTEDAVRELRA 183
Query 221 HGARRMVIAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIA 280
G RR+ +AP++LAPG L DR+ A EA + +A LG VA T+ RY A R++
Sbjct 184 AGCRRVAVAPYVLAPGRLPDRIVRGAAEADV-LAGVLGPSREVALTLLRRYDAAGLPRLS 242
Query 281 A 281
A
Sbjct 243 A 243
>gi|21224422|ref|NP_630201.1| secreted protein [Streptomyces coelicolor A3(2)]
gi|13276820|emb|CAC33938.1| putative secreted protein [Streptomyces coelicolor A3(2)]
Length=248
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/234 (41%), Positives = 128/234 (55%), Gaps = 7/234 (2%)
Query 46 PQLVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAV- 104
P L++ AHGS+DPR AA A+ R+ +RP + V F + N P++ VL V
Sbjct 7 PVLLVVAHGSRDPRHAATVHALVRRVRALRPDVRVETGFLDFNVPSVPGVLESLETEGVR 66
Query 105 ---VTPLLLADAYHARVDIPAQIASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPF 161
PLLL A+HA+ DIPA +A+ R+RQA VLG L+SAL RL E G++P
Sbjct 67 DVVALPLLLTRAFHAKADIPAVLAAAPPRLRIRQAEVLGPSPLLLSALERRLYEAGLTPA 126
Query 162 DHT-LGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRR 220
D + GVV+ + GSS P A A + +A R T W AV AF + DA +LR
Sbjct 127 DKSSTGVVLASAGSSDPEAIAVIAEIA-REWRHTGWCAVRPAFASASLPRTEDAVRQLRE 185
Query 221 HGARRMVIAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQA 274
G R+ +AP++LAPG L DR+ A A + +A LG P VA + +RY A
Sbjct 186 LGCARVAVAPYVLAPGFLPDRIARGAAGADV-LADVLGPAPEVARVLLERYDAA 238
>gi|302554988|ref|ZP_07307330.1| secreted protein [Streptomyces viridochromogenes DSM 40736]
gi|302472606|gb|EFL35699.1| secreted protein [Streptomyces viridochromogenes DSM 40736]
Length=246
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/231 (41%), Positives = 126/231 (55%), Gaps = 7/231 (3%)
Query 46 PQLVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVV 105
P L++ AHGS+DPR AA A+ R+ +RP L V F + N P++ VL V
Sbjct 5 PVLLVIAHGSRDPRHAATVHALVRRVRSLRPDLRVETGFLDFNVPSVRGVLESLATQGVR 64
Query 106 T----PLLLADAYHARVDIPAQIASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPF 161
T PLLL A+HA+ DIPA +A R+ QA VLG L+SAL RL E G+SP
Sbjct 65 TVVALPLLLTRAFHAKADIPAVLADAPSQLRIHQAEVLGPSPLLLSALERRLYEAGLSPA 124
Query 162 DH-TLGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRR 220
D + GVV+ + GS+ P A A + +A R T W AV AF + DA LR
Sbjct 125 DKSSTGVVLASAGSTDPEAIAVIAEIA-REWRHTGWCAVRPAFASASLPRTEDAVRELRA 183
Query 221 HGARRMVIAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRY 271
G R+ +AP++LAPG L DR+ A +A + +A LG P VA + +RY
Sbjct 184 LGCSRVAVAPYVLAPGFLPDRIARGAAQADV-LADVLGPAPEVARVVLERY 233
>gi|289768265|ref|ZP_06527643.1| secreted protein [Streptomyces lividans TK24]
gi|289698464|gb|EFD65893.1| secreted protein [Streptomyces lividans TK24]
Length=248
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/234 (41%), Positives = 128/234 (55%), Gaps = 7/234 (2%)
Query 46 PQLVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAV- 104
P L++ AHGS+DPR AA A+ R+ +RP + V F + N P++ VL V
Sbjct 7 PVLLVVAHGSRDPRHAATVHALVRRVRALRPDVRVETGFLDFNVPSVPGVLESLETEGVR 66
Query 105 ---VTPLLLADAYHARVDIPAQIASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPF 161
PLLL A+HA+ DIPA +A+ R+RQA VLG L+SAL RL E G++P
Sbjct 67 DVVALPLLLTRAFHAKADIPAVLAAAPPRLRIRQAEVLGPSPLLLSALERRLYEAGLTPA 126
Query 162 DHT-LGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRR 220
D + GVV+ + GSS P A A + +A R T W AV AF + DA +LR
Sbjct 127 DKSSTGVVLASAGSSDPEAIAVIAEIA-REWRHTGWCAVRPAFASASLPRTEDAVRQLRE 185
Query 221 HGARRMVIAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQA 274
G R+ +AP++LAPG L DR+ A A + +A LG P VA + +RY A
Sbjct 186 LGCARVAVAPYVLAPGFLPDRIARGAAGADV-LADVLGPAPEVARVLLERYDAA 238
>gi|182435193|ref|YP_001822912.1| hypothetical protein SGR_1400 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178463709|dbj|BAG18229.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
Length=250
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/237 (42%), Positives = 128/237 (55%), Gaps = 10/237 (4%)
Query 46 PQLVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNR--CRGA- 102
P L++ AHGS+DPR AA A+ R+ RPGL V AF E N+P++ VL R GA
Sbjct 4 PTLLVIAHGSRDPRHAATVHALTERVRAERPGLRVETAFLEFNAPSVPRVLERLAAEGAD 63
Query 103 -AVVTPLLLADAYHARVDIPAQIASCRVGH---RVRQASVLGEDIRLVSALHERLTELGV 158
V PLLL A+HA+ DIP+ + R RVRQA VLG L +AL RL E GV
Sbjct 64 EVVALPLLLTRAFHAKTDIPSVLREARARLPRLRVRQADVLGPSPLLNAALGRRLREAGV 123
Query 159 SPFD-HTLGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDR 217
P D G+V+ + GSS P A A + +A L T W AV AF + DA
Sbjct 124 RPGDLPRTGLVLASAGSSDPEAIAVIAEIAREL-RHTGWCAVRPAFASALLPRTEDAVRA 182
Query 218 LRRHGARRMVIAPWLLAPGILSDRVRGYAREAGI-AMAQPLGAHPMVAATMWDRYRQ 273
LR G R+ +AP+++APG L DR+ A AG +A LG P +A + DRY +
Sbjct 183 LRAEGVDRVAVAPYVIAPGRLPDRIVAGAEAAGADVLADVLGPAPEMARLLLDRYDE 239
>gi|302557598|ref|ZP_07309940.1| secreted protein [Streptomyces griseoflavus Tu4000]
gi|302475216|gb|EFL38309.1| secreted protein [Streptomyces griseoflavus Tu4000]
Length=245
Score = 132 bits (332), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 93/234 (40%), Positives = 125/234 (54%), Gaps = 7/234 (2%)
Query 46 PQLVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAV- 104
P L++ AHGS+DPR AA A+ R+ +RPGL V F + N P++ L V
Sbjct 4 PVLLVVAHGSRDPRHAATVHALVRRVRSLRPGLRVETGFLDFNLPSVTGALESLDAEGVR 63
Query 105 ---VTPLLLADAYHARVDIPAQIASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPF 161
PLLL A+HA+ DIPA +A R+ +A VLG L+SAL RL E G++P
Sbjct 64 EVVALPLLLTRAFHAKADIPAVLAQAPRRLRISRAEVLGPSPLLLSALERRLYEAGLTPA 123
Query 162 DHT-LGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRR 220
D + GVV+ + GSS P A A + +A R T W AV AF + A LR
Sbjct 124 DKSSTGVVLASAGSSDPEAIAVIAEIA-REWRHTGWCAVRPAFASASLPRTEQAVRELRA 182
Query 221 HGARRMVIAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQA 274
G R+ +AP++LAPG L DR+ A A + +A LG P VA + DRY +A
Sbjct 183 LGCARVAVAPYVLAPGFLPDRIARGAAGADV-LADVLGPAPEVARLLLDRYDEA 235
Lambda K H
0.321 0.131 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 445900241072
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40