BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2396 Length=361 Score E Sequences producing significant alignments: (Bits) Value gi|57116982|ref|YP_177878.1| PE-PGRS family protein [Mycobacteri... 610 1e-172 gi|15841912|ref|NP_336949.1| PE_PGRS family protein [Mycobacteri... 610 2e-172 gi|326904012|gb|EGE50945.1| PE-PGRS family protein [Mycobacteriu... 608 5e-172 gi|148662229|ref|YP_001283752.1| PE-PGRS family protein [Mycobac... 607 1e-171 gi|289575089|ref|ZP_06455316.1| PE-PGRS family protein [Mycobact... 607 1e-171 gi|339295295|gb|AEJ47406.1| hypothetical protein CCDC5079_2216 [... 605 4e-171 gi|254551443|ref|ZP_05141890.1| PE-PGRS family protein [Mycobact... 604 9e-171 gi|341602314|emb|CCC64988.1| PE-PGRS family protein [Mycobacteri... 227 3e-57 gi|31793574|ref|NP_856067.1| PE-PGRS family protein [Mycobacteri... 227 3e-57 gi|224990770|ref|YP_002645457.1| PE-PGRS family protein [Mycobac... 227 3e-57 gi|339298914|gb|AEJ51024.1| hypothetical protein CCDC5180_2187 [... 220 3e-55 gi|340627405|ref|YP_004745857.1| pe_pgrs 33 [Mycobacterium canet... 214 2e-53 gi|183984518|ref|YP_001852809.1| PE-PGRS family protein [Mycobac... 144 3e-32 gi|183985012|ref|YP_001853303.1| PE-PGRS family protein [Mycobac... 137 2e-30 gi|183982664|ref|YP_001850955.1| PE-PGRS family protein, PE_PGRS... 134 3e-29 gi|253799501|ref|YP_003032502.1| hypothetical protein TBMG_02531... 131 2e-28 gi|148822669|ref|YP_001287423.1| PE-PGRS family protein [Mycobac... 129 6e-28 gi|148661242|ref|YP_001282765.1| PE-PGRS family protein [Mycobac... 129 6e-28 gi|15842940|ref|NP_337977.1| PE_PGRS family protein [Mycobacteri... 128 1e-27 gi|339299780|gb|AEJ51890.1| hypothetical protein CCDC5180_3053 [... 127 2e-27 gi|339633355|ref|YP_004724997.1| PE-PGRS family protein [Mycobac... 127 3e-27 gi|340628328|ref|YP_004746780.1| pe_pgrs50 protein [Mycobacteriu... 127 3e-27 gi|148824551|ref|YP_001289305.1| PE-PGRS family protein [Mycobac... 127 3e-27 gi|57117094|ref|YP_177962.1| PE-PGRS family protein [Mycobacteri... 127 3e-27 gi|339296173|gb|AEJ48284.1| hypothetical protein CCDC5079_3095 [... 127 3e-27 gi|121639272|ref|YP_979496.1| hypothetical protein BCG_3414c [My... 127 4e-27 gi|183980330|ref|YP_001848621.1| PE-PGRS family protein, PE_PGRS... 126 4e-27 gi|341603297|emb|CCC65975.1| PE_PGRS50 [Mycobacterium bovis BCG ... 126 4e-27 gi|344221186|gb|AEN01817.1| PE-PGRS family protein [Mycobacteriu... 126 5e-27 gi|253800390|ref|YP_003033391.1| hypothetical protein TBMG_04106... 126 5e-27 gi|297634014|ref|ZP_06951794.1| PE-PGRS family protein [Mycobact... 126 5e-27 gi|254552456|ref|ZP_05142903.1| hypothetical protein Mtube_18730... 124 2e-26 gi|306784511|ref|ZP_07422833.1| putative PE family protein [Myco... 121 2e-25 gi|340626464|ref|YP_004744916.1| PE-PGRS family protein [Mycobac... 120 4e-25 gi|297634379|ref|ZP_06952159.1| PE-PGRS family protein [Mycobact... 118 1e-24 gi|340626105|ref|YP_004744557.1| PE-PGRS family protein [Mycobac... 118 2e-24 gi|289554051|ref|ZP_06443261.1| predicted protein [Mycobacterium... 117 2e-24 gi|289554408|ref|ZP_06443618.1| predicted protein [Mycobacterium... 116 5e-24 gi|289447790|ref|ZP_06437534.1| PE-PGRS family protein [Mycobact... 116 6e-24 gi|148823031|ref|YP_001287785.1| PE-PGRS family protein [Mycobac... 116 6e-24 gi|15841288|ref|NP_336325.1| PE_PGRS family protein [Mycobacteri... 116 6e-24 gi|340627170|ref|YP_004745622.1| PE-PGRS family protein [Mycobac... 116 7e-24 gi|297634751|ref|ZP_06952531.1| PE-PGRS family protein [Mycobact... 115 9e-24 gi|339632193|ref|YP_004723835.1| PE-PGRS family protein [Mycobac... 115 9e-24 gi|253798773|ref|YP_003031774.1| PE-PGRS family protein [Mycobac... 115 9e-24 gi|15841654|ref|NP_336691.1| PE_PGRS family protein [Mycobacteri... 115 9e-24 gi|31793342|ref|NP_855835.1| hypothetical protein Mb2186c [Mycob... 115 9e-24 gi|339298700|gb|AEJ50810.1| PE-PGRS family protein [Mycobacteriu... 115 1e-23 gi|344219640|gb|AEN00271.1| PE-PGRS family protein [Mycobacteriu... 114 2e-23 gi|294996728|ref|ZP_06802419.1| PE-PGRS family protein [Mycobact... 114 2e-23 >gi|57116982|ref|YP_177878.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|289443918|ref|ZP_06433662.1| PE-PGRS family protein [Mycobacterium tuberculosis T46] gi|294994496|ref|ZP_06800187.1| PE-PGRS family protein [Mycobacterium tuberculosis 210] 6 more sequence titles Length=361 Score = 610 bits (1573), Expect = 1e-172, Method: Compositional matrix adjust. Identities = 361/361 (100%), Positives = 361/361 (100%), Gaps = 0/361 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ Sbjct 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP Sbjct 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 Query 121 LIGDGTDAAPGSGGAGGAGGILIGNGGTGGASDLAGTGRGGVGGAGGAGGLFGIGGAGGG 180 LIGDGTDAAPGSGGAGGAGGILIGNGGTGGASDLAGTGRGGVGGAGGAGGLFGIGGAGGG Sbjct 121 LIGDGTDAAPGSGGAGGAGGILIGNGGTGGASDLAGTGRGGVGGAGGAGGLFGIGGAGGG 180 Query 181 CGSAVAIGGDGGAGGAGGVFSGGGAGGAGDAIGGSGGAGGTGGLLGGGGGAGGAGGAGGN 240 CGSAVAIGGDGGAGGAGGVFSGGGAGGAGDAIGGSGGAGGTGGLLGGGGGAGGAGGAGGN Sbjct 181 CGSAVAIGGDGGAGGAGGVFSGGGAGGAGDAIGGSGGAGGTGGLLGGGGGAGGAGGAGGN 240 Query 241 GGGASNSASIGGDGGSGGAGGMLYGAGGVGGNGGAAVAIGGDGGAGGRAGAIGNGGDGGN 300 GGGASNSASIGGDGGSGGAGGMLYGAGGVGGNGGAAVAIGGDGGAGGRAGAIGNGGDGGN Sbjct 241 GGGASNSASIGGDGGSGGAGGMLYGAGGVGGNGGAAVAIGGDGGAGGRAGAIGNGGDGGN 300 Query 301 GGTSNTPGGSGGDGGNGGNAGLIGNGGNGGNAEIVISGGSVAGTGGNGGLLLGFNGTNGL 360 GGTSNTPGGSGGDGGNGGNAGLIGNGGNGGNAEIVISGGSVAGTGGNGGLLLGFNGTNGL Sbjct 301 GGTSNTPGGSGGDGGNGGNAGLIGNGGNGGNAEIVISGGSVAGTGGNGGLLLGFNGTNGL 360 Query 361 P 361 P Sbjct 361 P 361 >gi|15841912|ref|NP_336949.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|148823599|ref|YP_001288353.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|253798527|ref|YP_003031528.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] 6 more sequence titles Length=382 Score = 610 bits (1572), Expect = 2e-172, Method: Compositional matrix adjust. Identities = 361/361 (100%), Positives = 361/361 (100%), Gaps = 0/361 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ Sbjct 22 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 81 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP Sbjct 82 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 141 Query 121 LIGDGTDAAPGSGGAGGAGGILIGNGGTGGASDLAGTGRGGVGGAGGAGGLFGIGGAGGG 180 LIGDGTDAAPGSGGAGGAGGILIGNGGTGGASDLAGTGRGGVGGAGGAGGLFGIGGAGGG Sbjct 142 LIGDGTDAAPGSGGAGGAGGILIGNGGTGGASDLAGTGRGGVGGAGGAGGLFGIGGAGGG 201 Query 181 CGSAVAIGGDGGAGGAGGVFSGGGAGGAGDAIGGSGGAGGTGGLLGGGGGAGGAGGAGGN 240 CGSAVAIGGDGGAGGAGGVFSGGGAGGAGDAIGGSGGAGGTGGLLGGGGGAGGAGGAGGN Sbjct 202 CGSAVAIGGDGGAGGAGGVFSGGGAGGAGDAIGGSGGAGGTGGLLGGGGGAGGAGGAGGN 261 Query 241 GGGASNSASIGGDGGSGGAGGMLYGAGGVGGNGGAAVAIGGDGGAGGRAGAIGNGGDGGN 300 GGGASNSASIGGDGGSGGAGGMLYGAGGVGGNGGAAVAIGGDGGAGGRAGAIGNGGDGGN Sbjct 262 GGGASNSASIGGDGGSGGAGGMLYGAGGVGGNGGAAVAIGGDGGAGGRAGAIGNGGDGGN 321 Query 301 GGTSNTPGGSGGDGGNGGNAGLIGNGGNGGNAEIVISGGSVAGTGGNGGLLLGFNGTNGL 360 GGTSNTPGGSGGDGGNGGNAGLIGNGGNGGNAEIVISGGSVAGTGGNGGLLLGFNGTNGL Sbjct 322 GGTSNTPGGSGGDGGNGGNAGLIGNGGNGGNAEIVISGGSVAGTGGNGGLLLGFNGTNGL 381 Query 361 P 361 P Sbjct 382 P 382 >gi|326904012|gb|EGE50945.1| PE-PGRS family protein [Mycobacterium tuberculosis W-148] Length=361 Score = 608 bits (1567), Expect = 5e-172, Method: Compositional matrix adjust. Identities = 360/361 (99%), Positives = 360/361 (99%), Gaps = 0/361 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ Sbjct 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP Sbjct 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 Query 121 LIGDGTDAAPGSGGAGGAGGILIGNGGTGGASDLAGTGRGGVGGAGGAGGLFGIGGAGGG 180 LIGDGTDAAPGSGGAGGAGGILIGNGGTGGASDLAGTGRGGVGGAGGAGGLFGI GAGGG Sbjct 121 LIGDGTDAAPGSGGAGGAGGILIGNGGTGGASDLAGTGRGGVGGAGGAGGLFGIDGAGGG 180 Query 181 CGSAVAIGGDGGAGGAGGVFSGGGAGGAGDAIGGSGGAGGTGGLLGGGGGAGGAGGAGGN 240 CGSAVAIGGDGGAGGAGGVFSGGGAGGAGDAIGGSGGAGGTGGLLGGGGGAGGAGGAGGN Sbjct 181 CGSAVAIGGDGGAGGAGGVFSGGGAGGAGDAIGGSGGAGGTGGLLGGGGGAGGAGGAGGN 240 Query 241 GGGASNSASIGGDGGSGGAGGMLYGAGGVGGNGGAAVAIGGDGGAGGRAGAIGNGGDGGN 300 GGGASNSASIGGDGGSGGAGGMLYGAGGVGGNGGAAVAIGGDGGAGGRAGAIGNGGDGGN Sbjct 241 GGGASNSASIGGDGGSGGAGGMLYGAGGVGGNGGAAVAIGGDGGAGGRAGAIGNGGDGGN 300 Query 301 GGTSNTPGGSGGDGGNGGNAGLIGNGGNGGNAEIVISGGSVAGTGGNGGLLLGFNGTNGL 360 GGTSNTPGGSGGDGGNGGNAGLIGNGGNGGNAEIVISGGSVAGTGGNGGLLLGFNGTNGL Sbjct 301 GGTSNTPGGSGGDGGNGGNAGLIGNGGNGGNAEIVISGGSVAGTGGNGGLLLGFNGTNGL 360 Query 361 P 361 P Sbjct 361 P 361 >gi|148662229|ref|YP_001283752.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148506381|gb|ABQ74190.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=361 Score = 607 bits (1565), Expect = 1e-171, Method: Compositional matrix adjust. Identities = 360/361 (99%), Positives = 360/361 (99%), Gaps = 0/361 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ Sbjct 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP Sbjct 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 Query 121 LIGDGTDAAPGSGGAGGAGGILIGNGGTGGASDLAGTGRGGVGGAGGAGGLFGIGGAGGG 180 LIGDGTDAAPGSGGAGGAGGILIGNGGTGGASDLAGTGRGGVGGAGGAGGLFGIGGAGGG Sbjct 121 LIGDGTDAAPGSGGAGGAGGILIGNGGTGGASDLAGTGRGGVGGAGGAGGLFGIGGAGGG 180 Query 181 CGSAVAIGGDGGAGGAGGVFSGGGAGGAGDAIGGSGGAGGTGGLLGGGGGAGGAGGAGGN 240 CGSAVAIGG GGAGGAGGVFSGGGAGGAGDAIGGSGGAGGTGGLLGGGGGAGGAGGAGGN Sbjct 181 CGSAVAIGGGGGAGGAGGVFSGGGAGGAGDAIGGSGGAGGTGGLLGGGGGAGGAGGAGGN 240 Query 241 GGGASNSASIGGDGGSGGAGGMLYGAGGVGGNGGAAVAIGGDGGAGGRAGAIGNGGDGGN 300 GGGASNSASIGGDGGSGGAGGMLYGAGGVGGNGGAAVAIGGDGGAGGRAGAIGNGGDGGN Sbjct 241 GGGASNSASIGGDGGSGGAGGMLYGAGGVGGNGGAAVAIGGDGGAGGRAGAIGNGGDGGN 300 Query 301 GGTSNTPGGSGGDGGNGGNAGLIGNGGNGGNAEIVISGGSVAGTGGNGGLLLGFNGTNGL 360 GGTSNTPGGSGGDGGNGGNAGLIGNGGNGGNAEIVISGGSVAGTGGNGGLLLGFNGTNGL Sbjct 301 GGTSNTPGGSGGDGGNGGNAGLIGNGGNGGNAEIVISGGSVAGTGGNGGLLLGFNGTNGL 360 Query 361 P 361 P Sbjct 361 P 361 >gi|289575089|ref|ZP_06455316.1| PE-PGRS family protein [Mycobacterium tuberculosis K85] gi|289539520|gb|EFD44098.1| PE-PGRS family protein [Mycobacterium tuberculosis K85] Length=361 Score = 607 bits (1564), Expect = 1e-171, Method: Compositional matrix adjust. Identities = 360/361 (99%), Positives = 360/361 (99%), Gaps = 0/361 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ Sbjct 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP Sbjct 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 Query 121 LIGDGTDAAPGSGGAGGAGGILIGNGGTGGASDLAGTGRGGVGGAGGAGGLFGIGGAGGG 180 LIGDGTDAAPGSGGAGGAGGILIGNGGTGGASDLAGTGRGGVGGAGGAGGLFGIGGAGGG Sbjct 121 LIGDGTDAAPGSGGAGGAGGILIGNGGTGGASDLAGTGRGGVGGAGGAGGLFGIGGAGGG 180 Query 181 CGSAVAIGGDGGAGGAGGVFSGGGAGGAGDAIGGSGGAGGTGGLLGGGGGAGGAGGAGGN 240 CGSAVAIGG GGAGGAGGVFSGGGAGGAGDAIGGSGGAGGTGGLLGGGGGAGGAGGAGGN Sbjct 181 CGSAVAIGGYGGAGGAGGVFSGGGAGGAGDAIGGSGGAGGTGGLLGGGGGAGGAGGAGGN 240 Query 241 GGGASNSASIGGDGGSGGAGGMLYGAGGVGGNGGAAVAIGGDGGAGGRAGAIGNGGDGGN 300 GGGASNSASIGGDGGSGGAGGMLYGAGGVGGNGGAAVAIGGDGGAGGRAGAIGNGGDGGN Sbjct 241 GGGASNSASIGGDGGSGGAGGMLYGAGGVGGNGGAAVAIGGDGGAGGRAGAIGNGGDGGN 300 Query 301 GGTSNTPGGSGGDGGNGGNAGLIGNGGNGGNAEIVISGGSVAGTGGNGGLLLGFNGTNGL 360 GGTSNTPGGSGGDGGNGGNAGLIGNGGNGGNAEIVISGGSVAGTGGNGGLLLGFNGTNGL Sbjct 301 GGTSNTPGGSGGDGGNGGNAGLIGNGGNGGNAEIVISGGSVAGTGGNGGLLLGFNGTNGL 360 Query 361 P 361 P Sbjct 361 P 361 >gi|339295295|gb|AEJ47406.1| hypothetical protein CCDC5079_2216 [Mycobacterium tuberculosis CCDC5079] Length=361 Score = 605 bits (1559), Expect = 4e-171, Method: Compositional matrix adjust. Identities = 360/361 (99%), Positives = 360/361 (99%), Gaps = 0/361 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ Sbjct 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP Sbjct 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 Query 121 LIGDGTDAAPGSGGAGGAGGILIGNGGTGGASDLAGTGRGGVGGAGGAGGLFGIGGAGGG 180 LIGDGTDAAPGSGGAGGAGGILIGNGGTGGASDLAGTGRGGVGGAGGAGGLFGIGGAGGG Sbjct 121 LIGDGTDAAPGSGGAGGAGGILIGNGGTGGASDLAGTGRGGVGGAGGAGGLFGIGGAGGG 180 Query 181 CGSAVAIGGDGGAGGAGGVFSGGGAGGAGDAIGGSGGAGGTGGLLGGGGGAGGAGGAGGN 240 GSAVAIGGDGGAGGAGGVFSGGGAGGAGDAIGGSGGAGGTGGLLGGGGGAGGAGGAGGN Sbjct 181 GGSAVAIGGDGGAGGAGGVFSGGGAGGAGDAIGGSGGAGGTGGLLGGGGGAGGAGGAGGN 240 Query 241 GGGASNSASIGGDGGSGGAGGMLYGAGGVGGNGGAAVAIGGDGGAGGRAGAIGNGGDGGN 300 GGGASNSASIGGDGGSGGAGGMLYGAGGVGGNGGAAVAIGGDGGAGGRAGAIGNGGDGGN Sbjct 241 GGGASNSASIGGDGGSGGAGGMLYGAGGVGGNGGAAVAIGGDGGAGGRAGAIGNGGDGGN 300 Query 301 GGTSNTPGGSGGDGGNGGNAGLIGNGGNGGNAEIVISGGSVAGTGGNGGLLLGFNGTNGL 360 GGTSNTPGGSGGDGGNGGNAGLIGNGGNGGNAEIVISGGSVAGTGGNGGLLLGFNGTNGL Sbjct 301 GGTSNTPGGSGGDGGNGGNAGLIGNGGNGGNAEIVISGGSVAGTGGNGGLLLGFNGTNGL 360 Query 361 P 361 P Sbjct 361 P 361 >gi|254551443|ref|ZP_05141890.1| PE-PGRS family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=361 Score = 604 bits (1557), Expect = 9e-171, Method: Compositional matrix adjust. Identities = 358/361 (99%), Positives = 358/361 (99%), Gaps = 0/361 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ Sbjct 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP Sbjct 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 Query 121 LIGDGTDAAPGSGGAGGAGGILIGNGGTGGASDLAGTGRGGVGGAGGAGGLFGIGGAGGG 180 LIGDGTDAAPGSGGAGG GGILIG GGTGGASDLAGTGRGGVGGAGG GGLFGIGGAGGG Sbjct 121 LIGDGTDAAPGSGGAGGHGGILIGTGGTGGASDLAGTGRGGVGGAGGNGGLFGIGGAGGG 180 Query 181 CGSAVAIGGDGGAGGAGGVFSGGGAGGAGDAIGGSGGAGGTGGLLGGGGGAGGAGGAGGN 240 CGSAVAIGGDGGAGGAGGVFSGGGAGGAGDAIGGSGGAGGTGGLLGGGGGAGGAGGAGGN Sbjct 181 CGSAVAIGGDGGAGGAGGVFSGGGAGGAGDAIGGSGGAGGTGGLLGGGGGAGGAGGAGGN 240 Query 241 GGGASNSASIGGDGGSGGAGGMLYGAGGVGGNGGAAVAIGGDGGAGGRAGAIGNGGDGGN 300 GGGASNSASIGGDGGSGGAGGMLYGAGGVGGNGGAAVAIGGDGGAGGRAGAIGNGGDGGN Sbjct 241 GGGASNSASIGGDGGSGGAGGMLYGAGGVGGNGGAAVAIGGDGGAGGRAGAIGNGGDGGN 300 Query 301 GGTSNTPGGSGGDGGNGGNAGLIGNGGNGGNAEIVISGGSVAGTGGNGGLLLGFNGTNGL 360 GGTSNTPGGSGGDGGNGGNAGLIGNGGNGGNAEIVISGGSVAGTGGNGGLLLGFNGTNGL Sbjct 301 GGTSNTPGGSGGDGGNGGNAGLIGNGGNGGNAEIVISGGSVAGTGGNGGLLLGFNGTNGL 360 Query 361 P 361 P Sbjct 361 P 361 >gi|341602314|emb|CCC64988.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=360 Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 125/127 (99%), Positives = 126/127 (99%), Gaps = 1/127 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MSFLIASPEALAATATYLTGIGSAI+AANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ Sbjct 1 MSFLIASPEALAATATYLTGIGSAINAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAE AAASPLQALQLELLNAINAPTLALLGRP Sbjct 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAE-AAASPLQALQLELLNAINAPTLALLGRP 119 Query 121 LIGDGTD 127 LIGDGTD Sbjct 120 LIGDGTD 126 >gi|31793574|ref|NP_856067.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|121638276|ref|YP_978500.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|31619167|emb|CAD97279.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] gi|121493924|emb|CAL72399.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] Length=360 Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 125/127 (99%), Positives = 126/127 (99%), Gaps = 1/127 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MSFLIASPEALAATATYLTGIGSAI+AANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ Sbjct 1 MSFLIASPEALAATATYLTGIGSAINAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAE AAASPLQALQLELLNAINAPTLALLGRP Sbjct 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAE-AAASPLQALQLELLNAINAPTLALLGRP 119 Query 121 LIGDGTD 127 LIGDGTD Sbjct 120 LIGDGTD 126 >gi|224990770|ref|YP_002645457.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|224773883|dbj|BAH26689.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] Length=360 Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 125/127 (99%), Positives = 126/127 (99%), Gaps = 1/127 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MSFLIASPEALAATATYLTGIGSAI+AANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ Sbjct 1 MSFLIASPEALAATATYLTGIGSAINAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAE AAASPLQALQLELLNAINAPTLALLGRP Sbjct 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAE-AAASPLQALQLELLNAINAPTLALLGRP 119 Query 121 LIGDGTD 127 LIGDGTD Sbjct 120 LIGDGTD 126 >gi|339298914|gb|AEJ51024.1| hypothetical protein CCDC5180_2187 [Mycobacterium tuberculosis CCDC5180] Length=361 Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 127/127 (100%), Positives = 127/127 (100%), Gaps = 0/127 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ Sbjct 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP Sbjct 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 Query 121 LIGDGTD 127 LIGDGTD Sbjct 121 LIGDGTD 127 >gi|340627405|ref|YP_004745857.1| pe_pgrs 33 [Mycobacterium canettii CIPT 140010059] gi|340005595|emb|CCC44759.1| pe_pgrs 33 [Mycobacterium canettii CIPT 140010059] Length=506 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 126/127 (99%), Positives = 126/127 (99%), Gaps = 0/127 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MSFLIASPEALAATAT LTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ Sbjct 1 MSFLIASPEALAATATDLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP Sbjct 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 Query 121 LIGDGTD 127 LIGDGTD Sbjct 121 LIGDGTD 127 >gi|183984518|ref|YP_001852809.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183177844|gb|ACC42954.1| PE-PGRS family protein [Mycobacterium marinum M] Length=443 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 86/134 (65%), Positives = 99/134 (74%), Gaps = 0/134 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MSFL +PE + A A+ L IG+A+S ANA A APTT +LAAG DEVS AI+ALFGAHAQ Sbjct 1 MSFLTTAPEFVNAAASDLASIGTAVSQANAAALAPTTGVLAAGADEVSAAITALFGAHAQ 60 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 YQALSA A FH QFV + AG Y AEAAAASPLQ L+ +LL INAPT ALLGRP Sbjct 61 TYQALSAQAATFHAQFVQLMATSAGRYATAEAAAASPLQTLEQQLLGVINAPTNALLGRP 120 Query 121 LIGDGTDAAPGSGG 134 LIG+G + APG+ G Sbjct 121 LIGNGANGAPGADG 134 >gi|183985012|ref|YP_001853303.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183178338|gb|ACC43448.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1451 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 90/143 (63%), Positives = 108/143 (76%), Gaps = 4/143 (2%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MS+LIA+PE + + A L GI SA+SAAN AA PTT+ILAAG DEVS AI+ALFGAHAQ Sbjct 1 MSYLIAAPELMQSAAADLAGIESALSAANVSAAVPTTQILAAGADEVSAAIAALFGAHAQ 60 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 AYQAL +HV AFH +FV L +GA SY AEAA+ +PLQAL + +NAPT ALLGRP Sbjct 61 AYQALGSHVTAFHQEFVQALNSGAASYANAEAASIAPLQALY----DLVNAPTQALLGRP 116 Query 121 LIGDGTDAAPGSGGAGGAGGILI 143 LIG+G + APG+G GG GG+L Sbjct 117 LIGNGANGAPGTGQNGGDGGLLF 139 Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust. Identities = 27/44 (62%), Positives = 31/44 (71%), Gaps = 3/44 (6%) Query 96 SPLQALQLELLNAINAPTLALLGRPLIGDGTDAAPGSGGAGGAG 139 SPL LQ + LNAINAP AL GRPLIG+GT PG+ G+G G Sbjct 774 SPLHILQQQTLNAINAPFDALTGRPLIGNGT---PGAAGSGADG 814 >gi|183982664|ref|YP_001850955.1| PE-PGRS family protein, PE_PGRS50 [Mycobacterium marinum M] gi|183175990|gb|ACC41100.1| PE-PGRS family protein, PE_PGRS50 [Mycobacterium marinum M] Length=2118 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 79/133 (60%), Positives = 96/133 (73%), Gaps = 3/133 (2%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MS + SPE +A A+ L IGS++ AANA AA PTT +L+A DEVS AI+ LFG HA Sbjct 1 MSLVTVSPELVAGAASDLARIGSSLGAANAAAAGPTTTVLSAAADEVSVAIATLFGTHAA 60 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQL---ELLNAINAPTLALL 117 YQ+LSA +AAFH+QFV TLT+GAG Y++ EA AS + ALQL LNAINAPT + L Sbjct 61 EYQSLSARMAAFHEQFVQTLTSGAGIYVSTEATNASFISALQLAEQNALNAINAPTQSWL 120 Query 118 GRPLIGDGTDAAP 130 GRPLIG+G DA P Sbjct 121 GRPLIGNGVDATP 133 >gi|253799501|ref|YP_003032502.1| hypothetical protein TBMG_02531 [Mycobacterium tuberculosis KZN 1435] gi|253321004|gb|ACT25607.1| predicted protein [Mycobacterium tuberculosis KZN 1435] gi|328459249|gb|AEB04672.1| hypothetical protein TBSG_02543 [Mycobacterium tuberculosis KZN 4207] Length=1408 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 74/122 (61%), Positives = 93/122 (77%), Gaps = 0/122 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MS +I +PE +AA A+ + IGS+I AANA AA TT +LAAG DEVS AI+ LFG+HA+ Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 YQA+S VAAFHD+F TL+A GSY++AEA A+PL L+ +LNA+NAPT ALLGRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 121 LI 122 LI Sbjct 122 LI 123 >gi|148822669|ref|YP_001287423.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|148721196|gb|ABR05821.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|344219280|gb|AEM99910.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=1407 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 74/122 (61%), Positives = 92/122 (76%), Gaps = 0/122 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MS +I +PE +AA A + IGS+I AANA AA TT +LAAG DEVS AI+ LFG+HA+ Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 YQA+S VAAFHD+F TL+A GSY++AEA A+PL L+ +LNA+NAPT ALLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 121 LI 122 LI Sbjct 121 LI 122 >gi|148661242|ref|YP_001282765.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148505394|gb|ABQ73203.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=1398 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 74/122 (61%), Positives = 92/122 (76%), Gaps = 0/122 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MS +I +PE +AA A + IGS+I AANA AA TT +LAAG DEVS AI+ LFG+HA+ Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 YQA+S VAAFHD+F TL+A GSY++AEA A+PL L+ +LNA+NAPT ALLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 121 LI 122 LI Sbjct 121 LI 122 >gi|15842940|ref|NP_337977.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13883276|gb|AAK47791.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=1507 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 87/130 (67%), Positives = 99/130 (77%), Gaps = 1/130 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MS ++A PE +AA A LTGIG AISAANA AA PTT++LAA DEVS AI+ALFG HAQ Sbjct 3 MSLMVA-PELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 YQALSA VA FH+QFV +LTA +Y AEAA ASPLQAL+ ++L AINAPT LGRP Sbjct 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121 Query 121 LIGDGTDAAP 130 LIGDG AP Sbjct 122 LIGDGVHGAP 131 >gi|339299780|gb|AEJ51890.1| hypothetical protein CCDC5180_3053 [Mycobacterium tuberculosis CCDC5180] Length=1562 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 87/130 (67%), Positives = 99/130 (77%), Gaps = 1/130 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MS ++A PE +AA A LTGIG AISAANA AA PTT++LAA DEVS AI+ALFG HAQ Sbjct 1 MSLMVA-PELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 59 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 YQALSA VA FH+QFV +LTA +Y AEAA ASPLQAL+ ++L AINAPT LGRP Sbjct 60 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 119 Query 121 LIGDGTDAAP 130 LIGDG AP Sbjct 120 LIGDGVHGAP 129 >gi|339633355|ref|YP_004724997.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339332711|emb|CCC28429.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=1916 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 87/130 (67%), Positives = 99/130 (77%), Gaps = 1/130 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MS ++A PE +AA A LTGIG AISAANA AA PTT++LAA DEVS AI+ALFG HAQ Sbjct 3 MSLMVA-PELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 YQALSA VA FH+QFV +LTA +Y AEAA ASPLQAL+ ++L AINAPT LGRP Sbjct 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121 Query 121 LIGDGTDAAP 130 LIGDG AP Sbjct 122 LIGDGVHGAP 131 >gi|340628328|ref|YP_004746780.1| pe_pgrs50 protein [Mycobacterium canettii CIPT 140010059] gi|340006518|emb|CCC45702.1| pe_pgrs50 protein [Mycobacterium canettii CIPT 140010059] Length=2008 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 87/130 (67%), Positives = 99/130 (77%), Gaps = 1/130 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MS ++A PE +AA A LTGIG AISAANA AA PTT++LAA DEVS AI+ALFG HAQ Sbjct 3 MSLMVA-PELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 YQALSA VA FH+QFV +LTA +Y AEAA ASPLQAL+ ++L AINAPT LGRP Sbjct 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121 Query 121 LIGDGTDAAP 130 LIGDG AP Sbjct 122 LIGDGVHGAP 131 >gi|148824551|ref|YP_001289305.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|148723078|gb|ABR07703.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] Length=1570 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 87/130 (67%), Positives = 99/130 (77%), Gaps = 1/130 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MS ++A PE +AA A LTGIG AISAANA AA PTT++LAA DEVS AI+ALFG HAQ Sbjct 3 MSLMVA-PELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 YQALSA VA FH+QFV +LTA +Y AEAA ASPLQAL+ ++L AINAPT LGRP Sbjct 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121 Query 121 LIGDGTDAAP 130 LIGDG AP Sbjct 122 LIGDGVHGAP 131 >gi|57117094|ref|YP_177962.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148663207|ref|YP_001284730.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|7476148|pir||H70846 hypothetical glycine-rich protein Rv3345c - Mycobacterium tuberculosis (strain H37RV) gi|38490359|emb|CAE55587.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148507359|gb|ABQ75168.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=1538 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 87/130 (67%), Positives = 99/130 (77%), Gaps = 1/130 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MS ++A PE +AA A LTGIG AISAANA AA PTT++LAA DEVS AI+ALFG HAQ Sbjct 3 MSLMVA-PELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 YQALSA VA FH+QFV +LTA +Y AEAA ASPLQAL+ ++L AINAPT LGRP Sbjct 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121 Query 121 LIGDGTDAAP 130 LIGDG AP Sbjct 122 LIGDGVHGAP 131 >gi|339296173|gb|AEJ48284.1| hypothetical protein CCDC5079_3095 [Mycobacterium tuberculosis CCDC5079] Length=1536 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 87/130 (67%), Positives = 99/130 (77%), Gaps = 1/130 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MS ++A PE +AA A LTGIG AISAANA AA PTT++LAA DEVS AI+ALFG HAQ Sbjct 1 MSLMVA-PELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 59 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 YQALSA VA FH+QFV +LTA +Y AEAA ASPLQAL+ ++L AINAPT LGRP Sbjct 60 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 119 Query 121 LIGDGTDAAP 130 LIGDG AP Sbjct 120 LIGDGVHGAP 129 >gi|121639272|ref|YP_979496.1| hypothetical protein BCG_3414c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991769|ref|YP_002646458.1| hypothetical protein JTY_3414 [Mycobacterium bovis BCG str. Tokyo 172] gi|121494920|emb|CAL73403.1| PE_PGRS50 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224774884|dbj|BAH27690.1| hypothetical protein JTY_3414 [Mycobacterium bovis BCG str. Tokyo 172] Length=1876 Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 87/130 (67%), Positives = 99/130 (77%), Gaps = 1/130 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MS ++A PE +AA A LTGIG AISAANA AA PTT++LAA DEVS AI+ALFG HAQ Sbjct 3 MSLMVA-PELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 YQALSA VA FH+QFV +LTA +Y AEAA ASPLQAL+ ++L AINAPT LGRP Sbjct 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121 Query 121 LIGDGTDAAP 130 LIGDG AP Sbjct 122 LIGDGVHGAP 131 >gi|183980330|ref|YP_001848621.1| PE-PGRS family protein, PE_PGRS1 [Mycobacterium marinum M] gi|183173656|gb|ACC38766.1| PE-PGRS family protein, PE_PGRS1 [Mycobacterium marinum M] Length=557 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 81/135 (60%), Positives = 98/135 (73%), Gaps = 3/135 (2%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MS++ A+PE +AA AT L G+ S +SAAN+ AA PT ++AAG DEVS I+ LF AHAQ Sbjct 1 MSYVFATPELVAAAATDLAGVQSVLSAANSAAAGPTMAVMAAGADEVSALIAGLFDAHAQ 60 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQ---LELLNAINAPTLALL 117 AYQALSA FHDQFV L AGA SY AAEAA ASPLQ +Q +L A+NAPT A+L Sbjct 61 AYQALSAQALVFHDQFVQMLNAGASSYAAAEAANASPLQVVQNLGQNVLAAVNAPTQAVL 120 Query 118 GRPLIGDGTDAAPGS 132 GRPLIGDG + +P + Sbjct 121 GRPLIGDGANGSPNT 135 >gi|341603297|emb|CCC65975.1| PE_PGRS50 [Mycobacterium bovis BCG str. Moreau RDJ] Length=1876 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 87/130 (67%), Positives = 99/130 (77%), Gaps = 1/130 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MS ++A PE +AA A LTGIG AISAANA AA PTT++LAA DEVS AI+ALFG HAQ Sbjct 3 MSLMVA-PELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 YQALSA VA FH+QFV +LTA +Y AEAA ASPLQAL+ ++L AINAPT LGRP Sbjct 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121 Query 121 LIGDGTDAAP 130 LIGDG AP Sbjct 122 LIGDGVHGAP 131 >gi|344221186|gb|AEN01817.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=1508 Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 87/130 (67%), Positives = 99/130 (77%), Gaps = 1/130 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MS ++A PE +AA A LTGIG AISAANA AA PTT++LAA DEVS AI+ALFG HAQ Sbjct 3 MSLMVA-PELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 YQALSA VA FH+QFV +LTA +Y AEAA ASPLQAL+ ++L AINAPT LGRP Sbjct 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121 Query 121 LIGDGTDAAP 130 LIGDG AP Sbjct 122 LIGDGVHGAP 131 >gi|253800390|ref|YP_003033391.1| hypothetical protein TBMG_04106 [Mycobacterium tuberculosis KZN 1435] gi|253321893|gb|ACT26496.1| predicted protein [Mycobacterium tuberculosis KZN 1435] gi|328460123|gb|AEB05546.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207] Length=1508 Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 87/130 (67%), Positives = 99/130 (77%), Gaps = 1/130 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MS ++A PE +AA A LTGIG AISAANA AA PTT++LAA DEVS AI+ALFG HAQ Sbjct 3 MSLMVA-PELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 YQALSA VA FH+QFV +LTA +Y AEAA ASPLQAL+ ++L AINAPT LGRP Sbjct 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121 Query 121 LIGDGTDAAP 130 LIGDG AP Sbjct 122 LIGDGVHGAP 131 >gi|297634014|ref|ZP_06951794.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207] Length=406 Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 74/122 (61%), Positives = 93/122 (77%), Gaps = 0/122 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MS +I +PE +AA A+ + IGS+I AANA AA TT +LAAG DEVS AI+ LFG+HA+ Sbjct 1 MSLVIVTPETVAAAASDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 YQA+S VAAFHD+F TL+A GSY++AEA A+PL L+ +LNA+NAPT ALLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 121 LI 122 LI Sbjct 121 LI 122 >gi|254552456|ref|ZP_05142903.1| hypothetical protein Mtube_18730 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=436 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 87/130 (67%), Positives = 99/130 (77%), Gaps = 1/130 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MS ++A PE +AA A LTGIG AISAANA AA PTT++LAA DEVS AI+ALFG HAQ Sbjct 1 MSLMVA-PELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 59 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 YQALSA VA FH+QFV +LTA +Y AEAA ASPLQAL+ ++L AINAPT LGRP Sbjct 60 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 119 Query 121 LIGDGTDAAP 130 LIGDG AP Sbjct 120 LIGDGVHGAP 129 >gi|306784511|ref|ZP_07422833.1| putative PE family protein [Mycobacterium tuberculosis SUMu003] gi|308330754|gb|EFP19605.1| putative PE family protein [Mycobacterium tuberculosis SUMu003] Length=404 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 84/125 (68%), Positives = 97/125 (78%), Gaps = 3/125 (2%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MS+L+ PE +AA AT L IGS+ISAANA AAAPTT ++AAG DEVS AI+ALFGAHA+ Sbjct 1 MSYLVVVPELVAAAATDLANIGSSISAANAAAAAPTTALVAAGGDEVSAAIAALFGAHAR 60 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 AYQALSA A FH+QFV L AG SY AEAA A Q++Q +LLN INAPT ALLGRP Sbjct 61 AYQALSAQAAMFHEQFVRALAAGGNSYAVAEAATA---QSVQQDLLNLINAPTQALLGRP 117 Query 121 LIGDG 125 LIG+G Sbjct 118 LIGNG 122 >gi|340626464|ref|YP_004744916.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340004654|emb|CCC43798.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=1408 Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 73/122 (60%), Positives = 93/122 (77%), Gaps = 0/122 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MS +I +PE++AA A+ + IGS AANA AA TT +LAAG DEVS AI+ LFG++A+ Sbjct 1 MSLVIVTPESVAAAASDVARIGSGFGAANAAAAGSTTSVLAAGADEVSAAIALLFGSYAR 60 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 YQA+S VAAFHD+FV TL+A GSY++AEA A+PL L+ +LNA+NAPT ALLGRP Sbjct 61 EYQAISTQVAAFHDRFVQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 121 LI 122 LI Sbjct 121 LI 122 >gi|297634379|ref|ZP_06952159.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207] Length=354 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 95/143 (67%), Positives = 109/143 (77%), Gaps = 4/143 (2%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MSF++ PEALAA AT L GIGS I ANA AA PTT +LAA DEVS A++ALF HAQ Sbjct 1 MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ 60 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 AYQALSA A FH+QFV LTAGAGSY AAEAA+A+PL+ +L+ INAP LALLGRP Sbjct 61 AYQALSAQAALFHEQFVRALTAGAGSYAAAEAASAAPLEG----VLDVINAPALALLGRP 116 Query 121 LIGDGTDAAPGSGGAGGAGGILI 143 LIG+G + APG+G GG GGILI Sbjct 117 LIGNGANGAPGTGANGGDGGILI 139 >gi|340626105|ref|YP_004744557.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340004295|emb|CCC43436.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=856 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 81/125 (65%), Positives = 95/125 (76%), Gaps = 0/125 (0%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MSF+IA+PEAL A A+ L GIGSA++ ANA APTT +LAAG DEVS+AI+ALFGAH Q Sbjct 1 MSFVIAAPEALVAVASDLAGIGSALAEANAAVLAPTTGLLAAGADEVSSAIAALFGAHGQ 60 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 AYQ +SA +AFH QFV LT G G+Y AAEAA S Q++ LL+ IN PT ALLGRP Sbjct 61 AYQTVSAQASAFHAQFVQALTGGGGAYAAAEAANVSAAQSVDQRLLDLINGPTQALLGRP 120 Query 121 LIGDG 125 LIGDG Sbjct 121 LIGDG 125 >gi|289554051|ref|ZP_06443261.1| predicted protein [Mycobacterium tuberculosis KZN 605] gi|289438683|gb|EFD21176.1| predicted protein [Mycobacterium tuberculosis KZN 605] Length=356 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 85/127 (67%), Positives = 97/127 (77%), Gaps = 6/127 (4%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MSF+IA+PE +AA AT L IGS+ISAA+A AA PT ILAAG DEVS AISALFG+HAQ Sbjct 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 YQ LSA +AA+H+QFV L AGAGSY +AEAA +Q LLNAINAPT LLGRP Sbjct 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAA------NVQQTLLNAINAPTQTLLGRP 114 Query 121 LIGDGTD 127 LIG+G D Sbjct 115 LIGNGAD 121 >gi|289554408|ref|ZP_06443618.1| predicted protein [Mycobacterium tuberculosis KZN 605] gi|289439040|gb|EFD21533.1| predicted protein [Mycobacterium tuberculosis KZN 605] Length=518 Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 95/143 (67%), Positives = 109/143 (77%), Gaps = 4/143 (2%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MSF++ PEALAA AT L GIGS I ANA AA PTT +LAA DEVS A++ALF HAQ Sbjct 21 MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ 80 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 AYQALSA A FH+QFV LTAGAGSY AAEAA+A+PL+ +L+ INAP LALLGRP Sbjct 81 AYQALSAQAALFHEQFVRALTAGAGSYAAAEAASAAPLEG----VLDVINAPALALLGRP 136 Query 121 LIGDGTDAAPGSGGAGGAGGILI 143 LIG+G + APG+G GG GGILI Sbjct 137 LIGNGANGAPGTGANGGDGGILI 159 >gi|289447790|ref|ZP_06437534.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A] gi|289420748|gb|EFD17949.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A] Length=621 Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 85/127 (67%), Positives = 97/127 (77%), Gaps = 6/127 (4%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MSF+IA+PE +AA AT L IGS+ISAA+A AA PT ILAAG DEVS AISALFG+HAQ Sbjct 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 YQ LSA +AA+H+QFV L AGAGSY +AEAA +Q LLNAINAPT LLGRP Sbjct 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAA------NVQQTLLNAINAPTQTLLGRP 114 Query 121 LIGDGTD 127 LIG+G D Sbjct 115 LIGNGAD 121 >gi|148823031|ref|YP_001287785.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|253799138|ref|YP_003032139.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|148721558|gb|ABR06183.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|253320641|gb|ACT25244.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|328458893|gb|AEB04316.1| hypothetical protein TBSG_02187 [Mycobacterium tuberculosis KZN 4207] Length=518 Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 95/143 (67%), Positives = 109/143 (77%), Gaps = 4/143 (2%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MSF++ PEALAA AT L GIGS I ANA AA PTT +LAA DEVS A++ALF HAQ Sbjct 21 MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ 80 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 AYQALSA A FH+QFV LTAGAGSY AAEAA+A+PL+ +L+ INAP LALLGRP Sbjct 81 AYQALSAQAALFHEQFVRALTAGAGSYAAAEAASAAPLEG----VLDVINAPALALLGRP 136 Query 121 LIGDGTDAAPGSGGAGGAGGILI 143 LIG+G + APG+G GG GGILI Sbjct 137 LIGNGANGAPGTGANGGDGGILI 159 >gi|15841288|ref|NP_336325.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13881517|gb|AAK46139.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=491 Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 95/143 (67%), Positives = 109/143 (77%), Gaps = 4/143 (2%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MSF++ PEALAA AT L GIGS I ANA AA PTT +LAA DEVS A++ALF HAQ Sbjct 21 MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ 80 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 AYQALSA A FH+QFV LTAGAGSY AAEAA+A+PL+ +L+ INAP LALLGRP Sbjct 81 AYQALSAQAALFHEQFVRALTAGAGSYAAAEAASAAPLEG----VLDVINAPALALLGRP 136 Query 121 LIGDGTDAAPGSGGAGGAGGILI 143 LIG+G + APG+G GG GGILI Sbjct 137 LIGNGANGAPGTGANGGDGGILI 159 >gi|340627170|ref|YP_004745622.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340005360|emb|CCC44518.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=526 Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 63/93 (68%), Positives = 70/93 (76%), Gaps = 6/93 (6%) Query 35 PTTEILAAGTDEVSTAISALFGAHAQAYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAA 94 PT ILAAG DEVS AISALFG+HAQ YQ LSA +AA+H+QFV L AGAGSY +AEAA Sbjct 35 PTMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAA- 93 Query 95 ASPLQALQLELLNAINAPTLALLGRPLIGDGTD 127 +Q LLNAINAPT LLGRPLIG+G D Sbjct 94 -----NVQQTLLNAINAPTQTLLGRPLIGNGAD 121 >gi|297634751|ref|ZP_06952531.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207] Length=532 Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 63/93 (68%), Positives = 70/93 (76%), Gaps = 6/93 (6%) Query 35 PTTEILAAGTDEVSTAISALFGAHAQAYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAA 94 PT ILAAG DEVS AISALFG+HAQ YQ LSA +AA+H+QFV L AGAGSY +AEAA Sbjct 35 PTMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAA- 93 Query 95 ASPLQALQLELLNAINAPTLALLGRPLIGDGTD 127 +Q LLNAINAPT LLGRPLIG+G D Sbjct 94 -----NVQQTLLNAINAPTQTLLGRPLIGNGAD 121 >gi|339632193|ref|YP_004723835.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339331549|emb|CCC27245.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=526 Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 63/93 (68%), Positives = 70/93 (76%), Gaps = 6/93 (6%) Query 35 PTTEILAAGTDEVSTAISALFGAHAQAYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAA 94 PT ILAAG DEVS AISALFG+HAQ YQ LSA +AA+H+QFV L AGAGSY +AEAA Sbjct 35 PTMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAA- 93 Query 95 ASPLQALQLELLNAINAPTLALLGRPLIGDGTD 127 +Q LLNAINAPT LLGRPLIG+G D Sbjct 94 -----NVQQTLLNAINAPTQTLLGRPLIGNGAD 121 >gi|253798773|ref|YP_003031774.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|253320276|gb|ACT24879.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|328458536|gb|AEB03959.1| hypothetical protein TBSG_01830 [Mycobacterium tuberculosis KZN 4207] Length=532 Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 63/93 (68%), Positives = 70/93 (76%), Gaps = 6/93 (6%) Query 35 PTTEILAAGTDEVSTAISALFGAHAQAYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAA 94 PT ILAAG DEVS AISALFG+HAQ YQ LSA +AA+H+QFV L AGAGSY +AEAA Sbjct 35 PTMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAA- 93 Query 95 ASPLQALQLELLNAINAPTLALLGRPLIGDGTD 127 +Q LLNAINAPT LLGRPLIG+G D Sbjct 94 -----NVQQTLLNAINAPTQTLLGRPLIGNGAD 121 >gi|15841654|ref|NP_336691.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|57116953|ref|YP_177865.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148661978|ref|YP_001283501.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] 9 more sequence titles Length=532 Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 63/93 (68%), Positives = 70/93 (76%), Gaps = 6/93 (6%) Query 35 PTTEILAAGTDEVSTAISALFGAHAQAYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAA 94 PT ILAAG DEVS AISALFG+HAQ YQ LSA +AA+H+QFV L AGAGSY +AEAA Sbjct 35 PTMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAA- 93 Query 95 ASPLQALQLELLNAINAPTLALLGRPLIGDGTD 127 +Q LLNAINAPT LLGRPLIG+G D Sbjct 94 -----NVQQTLLNAINAPTQTLLGRPLIGNGAD 121 >gi|31793342|ref|NP_855835.1| hypothetical protein Mb2186c [Mycobacterium bovis AF2122/97] gi|121638044|ref|YP_978268.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990538|ref|YP_002645225.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|31618934|emb|CAD97039.1| conserved hypothetical protein, PE_PGRS [Mycobacterium bovis AF2122/97] gi|121493692|emb|CAL72167.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773651|dbj|BAH26457.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341602082|emb|CCC64756.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=490 Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 63/93 (68%), Positives = 70/93 (76%), Gaps = 6/93 (6%) Query 35 PTTEILAAGTDEVSTAISALFGAHAQAYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAA 94 PT ILAAG DEVS AISALFG+HAQ YQ LSA +AA+H+QFV L AGAGSY +AEAA Sbjct 35 PTMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAA- 93 Query 95 ASPLQALQLELLNAINAPTLALLGRPLIGDGTD 127 +Q LLNAINAPT LLGRPLIG+G D Sbjct 94 -----NVQQTLLNAINAPTQTLLGRPLIGNGAD 121 >gi|339298700|gb|AEJ50810.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180] Length=532 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 63/93 (68%), Positives = 70/93 (76%), Gaps = 6/93 (6%) Query 35 PTTEILAAGTDEVSTAISALFGAHAQAYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAA 94 PT ILAAG DEVS AISALFG+HAQ YQ LSA +AA+H+QFV L AGAGSY +AEAA Sbjct 35 PTMGILAAGADEVSVAISALFGSHAQGYQTLSAQLAAYHNQFVRALNAGAGSYASAEAA- 93 Query 95 ASPLQALQLELLNAINAPTLALLGRPLIGDGTD 127 +Q LLNAINAPT LLGRPLIG+G D Sbjct 94 -----NVQQTLLNAINAPTQTLLGRPLIGNGAD 121 >gi|344219640|gb|AEN00271.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=511 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 95/143 (67%), Positives = 109/143 (77%), Gaps = 4/143 (2%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MSF++ PEALAA AT L GIGS I ANA AA PTT +LAA DEVS A++ALF HAQ Sbjct 1 MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ 60 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 AYQALSA A FH+QFV LTAGAGSY AAEAA+A+PL+ +L+ INAP LALLGRP Sbjct 61 AYQALSAQAALFHEQFVRALTAGAGSYAAAEAASAAPLEG----VLDVINAPALALLGRP 116 Query 121 LIGDGTDAAPGSGGAGGAGGILI 143 LIG+G + APG+G GG GGILI Sbjct 117 LIGNGANGAPGTGANGGDGGILI 139 >gi|294996728|ref|ZP_06802419.1| PE-PGRS family protein [Mycobacterium tuberculosis 210] Length=501 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 95/143 (67%), Positives = 109/143 (77%), Gaps = 4/143 (2%) Query 1 MSFLIASPEALAATATYLTGIGSAISAANAVAAAPTTEILAAGTDEVSTAISALFGAHAQ 60 MSF++ PEALAA AT L GIGS I ANA AA PTT +LAA DEVS A++ALF HAQ Sbjct 1 MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ 60 Query 61 AYQALSAHVAAFHDQFVHTLTAGAGSYMAAEAAAASPLQALQLELLNAINAPTLALLGRP 120 AYQALSA A FH+QFV LTAGAGSY AAEAA+A+PL+ +L+ INAP LALLGRP Sbjct 61 AYQALSAQAALFHEQFVRALTAGAGSYAAAEAASAAPLEG----VLDVINAPALALLGRP 116 Query 121 LIGDGTDAAPGSGGAGGAGGILI 143 LIG+G + APG+G GG GGILI Sbjct 117 LIGNGANGAPGTGANGGDGGILI 139 Lambda K H 0.309 0.138 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 675949021000 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40