BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2405
Length=189
Score E
Sequences producing significant alignments: (Bits) Value
gi|148823607|ref|YP_001288362.1| hypothetical protein TBFG_12433... 377 3e-103
gi|15609542|ref|NP_216921.1| hypothetical protein Rv2405 [Mycoba... 375 1e-102
gi|340627416|ref|YP_004745868.1| hypothetical protein MCAN_24391... 373 6e-102
gi|339632432|ref|YP_004724074.1| hypothetical protein MAF_24200 ... 372 1e-101
gi|183983705|ref|YP_001851996.1| hypothetical protein MMAR_3725 ... 308 3e-82
gi|254818755|ref|ZP_05223756.1| hypothetical protein MintA_02464... 303 1e-80
gi|240169955|ref|ZP_04748614.1| hypothetical protein MkanA1_1162... 299 2e-79
gi|296170538|ref|ZP_06852122.1| conserved hypothetical protein [... 298 3e-79
gi|15841922|ref|NP_336959.1| hypothetical protein MT2477 [Mycoba... 294 4e-78
gi|118465524|ref|YP_881001.1| hypothetical protein MAV_1777 [Myc... 289 2e-76
gi|336458248|gb|EGO37229.1| PemK-like protein [Mycobacterium avi... 289 2e-76
gi|41408316|ref|NP_961152.1| hypothetical protein MAP2218 [Mycob... 288 3e-76
gi|118618936|ref|YP_907268.1| hypothetical protein MUL_3668 [Myc... 288 4e-76
gi|342857803|ref|ZP_08714459.1| hypothetical protein MCOL_02965 ... 274 4e-72
gi|333990146|ref|YP_004522760.1| hypothetical protein JDM601_150... 268 3e-70
gi|145223259|ref|YP_001133937.1| hypothetical protein Mflv_2672 ... 260 6e-68
gi|120404840|ref|YP_954669.1| hypothetical protein Mvan_3882 [My... 259 1e-67
gi|108800460|ref|YP_640657.1| hypothetical protein Mmcs_3494 [My... 253 1e-65
gi|126436084|ref|YP_001071775.1| hypothetical protein Mjls_3507 ... 253 1e-65
gi|118469249|ref|YP_888828.1| hypothetical protein MSMEG_4558 [M... 238 5e-61
gi|169628729|ref|YP_001702378.1| hypothetical protein MAB_1639c ... 224 4e-57
gi|111018289|ref|YP_701261.1| hypothetical protein RHA1_ro01279 ... 219 1e-55
gi|226360413|ref|YP_002778191.1| hypothetical protein ROP_09990 ... 215 3e-54
gi|226307249|ref|YP_002767209.1| hypothetical protein RER_37620 ... 202 1e-50
gi|312140317|ref|YP_004007653.1| hypothetical protein REQ_29570 ... 201 4e-50
gi|325677108|ref|ZP_08156777.1| hypothetical protein HMPREF0724_... 201 6e-50
gi|229493186|ref|ZP_04386978.1| conserved hypothetical protein [... 201 6e-50
gi|54023365|ref|YP_117607.1| hypothetical protein nfa13980 [Noca... 192 3e-47
gi|319949557|ref|ZP_08023604.1| hypothetical protein ES5_08891 [... 187 8e-46
gi|296140489|ref|YP_003647732.1| hypothetical protein Tpau_2795 ... 181 4e-44
gi|324998893|ref|ZP_08120005.1| hypothetical protein PseP1_09019... 175 4e-42
gi|262203069|ref|YP_003274277.1| hypothetical protein Gbro_3179 ... 155 2e-36
gi|326381592|ref|ZP_08203286.1| hypothetical protein SCNU_01535 ... 155 4e-36
gi|315506326|ref|YP_004085213.1| hypothetical protein ML5_5601 [... 154 7e-36
gi|302867268|ref|YP_003835905.1| hypothetical protein Micau_2795... 153 1e-35
gi|238064411|ref|ZP_04609120.1| hypothetical protein MCAG_05377 ... 153 1e-35
gi|330467936|ref|YP_004405679.1| hypothetical protein VAB18032_1... 153 1e-35
gi|343926795|ref|ZP_08766288.1| hypothetical protein GOALK_072_0... 152 2e-35
gi|331696655|ref|YP_004332894.1| hypothetical protein Psed_2841 ... 147 5e-34
gi|259507863|ref|ZP_05750763.1| conserved hypothetical protein [... 144 9e-33
gi|19553541|ref|NP_601543.1| hypothetical protein NCgl2260 [Cory... 141 5e-32
gi|145296310|ref|YP_001139131.1| hypothetical protein cgR_2225 [... 139 2e-31
gi|297562312|ref|YP_003681286.1| hypothetical protein Ndas_3375 ... 139 2e-31
gi|25028799|ref|NP_738853.1| hypothetical protein CE2243 [Coryne... 139 3e-31
gi|237785923|ref|YP_002906628.1| hypothetical protein ckrop_1343... 135 2e-30
gi|220912732|ref|YP_002488041.1| hypothetical protein Achl_1978 ... 135 3e-30
gi|72160769|ref|YP_288426.1| hypothetical protein Tfu_0365 [Ther... 133 1e-29
gi|213966185|ref|ZP_03394371.1| conserved hypothetical protein [... 132 2e-29
gi|269794651|ref|YP_003314106.1| hypothetical protein Sked_13320... 131 4e-29
gi|345003688|ref|YP_004806542.1| hypothetical protein SACTE_6227... 131 5e-29
>gi|148823607|ref|YP_001288362.1| hypothetical protein TBFG_12433 [Mycobacterium tuberculosis F11]
gi|253798517|ref|YP_003031518.1| hypothetical protein TBMG_01569 [Mycobacterium tuberculosis KZN
1435]
gi|254232542|ref|ZP_04925869.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
31 more sequence titles
Length=200
Score = 377 bits (969), Expect = 3e-103, Method: Compositional matrix adjust.
Identities = 189/189 (100%), Positives = 189/189 (100%), Gaps = 0/189 (0%)
Query 1 LQRFAENLVFTEAPKLVRHLQNTQETLRTIRQAVKITANIMTTAVPSPPAEIAAGRPVTS 60
LQRFAENLVFTEAPKLVRHLQNTQETLRTIRQAVKITANIMTTAVPSPPAEIAAGRPVTS
Sbjct 12 LQRFAENLVFTEAPKLVRHLQNTQETLRTIRQAVKITANIMTTAVPSPPAEIAAGRPVTS 71
Query 61 TSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLL 120
TSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLL
Sbjct 72 TSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLL 131
Query 121 VSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAA 180
VSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAA
Sbjct 132 VSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAA 191
Query 181 RLRADYAWR 189
RLRADYAWR
Sbjct 192 RLRADYAWR 200
>gi|15609542|ref|NP_216921.1| hypothetical protein Rv2405 [Mycobacterium tuberculosis H37Rv]
gi|31793584|ref|NP_856077.1| hypothetical protein Mb2428 [Mycobacterium bovis AF2122/97]
gi|121638286|ref|YP_978510.1| hypothetical protein BCG_2421 [Mycobacterium bovis BCG str. Pasteur
1173P2]
40 more sequence titles
Length=189
Score = 375 bits (964), Expect = 1e-102, Method: Compositional matrix adjust.
Identities = 188/189 (99%), Positives = 189/189 (100%), Gaps = 0/189 (0%)
Query 1 LQRFAENLVFTEAPKLVRHLQNTQETLRTIRQAVKITANIMTTAVPSPPAEIAAGRPVTS 60
+QRFAENLVFTEAPKLVRHLQNTQETLRTIRQAVKITANIMTTAVPSPPAEIAAGRPVTS
Sbjct 1 MQRFAENLVFTEAPKLVRHLQNTQETLRTIRQAVKITANIMTTAVPSPPAEIAAGRPVTS 60
Query 61 TSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLL 120
TSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLL
Sbjct 61 TSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLL 120
Query 121 VSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAA 180
VSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAA
Sbjct 121 VSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAA 180
Query 181 RLRADYAWR 189
RLRADYAWR
Sbjct 181 RLRADYAWR 189
>gi|340627416|ref|YP_004745868.1| hypothetical protein MCAN_24391 [Mycobacterium canettii CIPT
140010059]
gi|340005606|emb|CCC44770.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=189
Score = 373 bits (958), Expect = 6e-102, Method: Compositional matrix adjust.
Identities = 187/189 (99%), Positives = 188/189 (99%), Gaps = 0/189 (0%)
Query 1 LQRFAENLVFTEAPKLVRHLQNTQETLRTIRQAVKITANIMTTAVPSPPAEIAAGRPVTS 60
+QRFAENLVFTEAPKLVR LQNTQETLRTIRQAVKITANIMTTAVPSPPAEIAAGRPVTS
Sbjct 1 MQRFAENLVFTEAPKLVRQLQNTQETLRTIRQAVKITANIMTTAVPSPPAEIAAGRPVTS 60
Query 61 TSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLL 120
TSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLL
Sbjct 61 TSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLL 120
Query 121 VSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAA 180
VSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAA
Sbjct 121 VSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAA 180
Query 181 RLRADYAWR 189
RLRADYAWR
Sbjct 181 RLRADYAWR 189
>gi|339632432|ref|YP_004724074.1| hypothetical protein MAF_24200 [Mycobacterium africanum GM041182]
gi|339331788|emb|CCC27490.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
Length=189
Score = 372 bits (955), Expect = 1e-101, Method: Compositional matrix adjust.
Identities = 187/189 (99%), Positives = 188/189 (99%), Gaps = 0/189 (0%)
Query 1 LQRFAENLVFTEAPKLVRHLQNTQETLRTIRQAVKITANIMTTAVPSPPAEIAAGRPVTS 60
+QRFAENLVFTEAPKLVRHLQNTQETLRTIRQAVKITANIMTTAVPSPPAEIAAGRPVTS
Sbjct 1 MQRFAENLVFTEAPKLVRHLQNTQETLRTIRQAVKITANIMTTAVPSPPAEIAAGRPVTS 60
Query 61 TSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLL 120
TSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLL
Sbjct 61 TSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLL 120
Query 121 VSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAA 180
VSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAA
Sbjct 121 VSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAA 180
Query 181 RLRADYAWR 189
RLRAD AWR
Sbjct 181 RLRADCAWR 189
>gi|183983705|ref|YP_001851996.1| hypothetical protein MMAR_3725 [Mycobacterium marinum M]
gi|183177031|gb|ACC42141.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=200
Score = 308 bits (788), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 146/189 (78%), Positives = 170/189 (90%), Gaps = 0/189 (0%)
Query 1 LQRFAENLVFTEAPKLVRHLQNTQETLRTIRQAVKITANIMTTAVPSPPAEIAAGRPVTS 60
QRFAENLVF EAPK+V LQNTQETLRTI+QAVKITANI+ +P PPAEI AGRPVT
Sbjct 12 FQRFAENLVFNEAPKVVHRLQNTQETLRTIQQAVKITANIVAMGLPPPPAEITAGRPVTD 71
Query 61 TSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLL 120
TS PTAARAR+L Y+PDLDGRADPGEIVWTWV YE DPT+G+DRPVLVVGR+R+VLL L+
Sbjct 72 TSSPTAARARKLTYSPDLDGRADPGEIVWTWVVYEDDPTQGQDRPVLVVGRERNVLLALM 131
Query 121 VSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAA 180
+SSQE+++AD DWV IG+G WD+EG++ WVRLDRVLDVPEESIRR+GAIL+R+VFDVVAA
Sbjct 132 LSSQEQYSADPDWVAIGTGDWDFEGQQGWVRLDRVLDVPEESIRRQGAILQRDVFDVVAA 191
Query 181 RLRADYAWR 189
RLRA+Y+WR
Sbjct 192 RLRAEYSWR 200
>gi|254818755|ref|ZP_05223756.1| hypothetical protein MintA_02464 [Mycobacterium intracellulare
ATCC 13950]
Length=200
Score = 303 bits (775), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 146/189 (78%), Positives = 162/189 (86%), Gaps = 0/189 (0%)
Query 1 LQRFAENLVFTEAPKLVRHLQNTQETLRTIRQAVKITANIMTTAVPSPPAEIAAGRPVTS 60
QRFAENLVF AP+L RH+QN+Q LR ++QAV+ITAN++ A P P AGRPVTS
Sbjct 12 FQRFAENLVFNGAPRLARHVQNSQTVLRELQQAVRITANVIAAAAPPPSDTTVAGRPVTS 71
Query 61 TSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLL 120
S PTA RAR+LVYAP LDGRADPGEIVWTWV YE DP+RGKDRPVLVVGRDR LLGL+
Sbjct 72 NSRPTAQRARKLVYAPSLDGRADPGEIVWTWVVYEDDPSRGKDRPVLVVGRDRGTLLGLM 131
Query 121 VSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAA 180
VSSQERHAAD +WVGIGSG+WDYEGR SWVRLDRVLDVPEE IRREGAIL+RE+FDVVAA
Sbjct 132 VSSQERHAADPEWVGIGSGSWDYEGRSSWVRLDRVLDVPEEGIRREGAILDREIFDVVAA 191
Query 181 RLRADYAWR 189
RLRADY+WR
Sbjct 192 RLRADYSWR 200
>gi|240169955|ref|ZP_04748614.1| hypothetical protein MkanA1_11629 [Mycobacterium kansasii ATCC
12478]
Length=203
Score = 299 bits (765), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 149/192 (78%), Positives = 164/192 (86%), Gaps = 3/192 (1%)
Query 1 LQRFAENL---VFTEAPKLVRHLQNTQETLRTIRQAVKITANIMTTAVPSPPAEIAAGRP 57
QRF ENL VF EAPK VR LQN+Q L+ +++AVKITANIM +P PP EIAAGRP
Sbjct 12 FQRFTENLGNLVFNEAPKAVRQLQNSQAVLQELQRAVKITANIMAMGLPPPPQEIAAGRP 71
Query 58 VTSTSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLL 117
VTSTS PTA RARRLVYAPDLDGRA PGEIVWTWV YE DPTRGKDRPVLVVGR+R+VLL
Sbjct 72 VTSTSFPTAQRARRLVYAPDLDGRAGPGEIVWTWVVYEDDPTRGKDRPVLVVGRNRNVLL 131
Query 118 GLLVSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDV 177
GL++S +E AADRDWVGIGSG WDYEG++SWVRLDRVLDVPEESIRREGAIL R+ FDV
Sbjct 132 GLMLSVREDRAADRDWVGIGSGDWDYEGKQSWVRLDRVLDVPEESIRREGAILPRDTFDV 191
Query 178 VAARLRADYAWR 189
VAARLR +YAWR
Sbjct 192 VAARLRTEYAWR 203
>gi|296170538|ref|ZP_06852122.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894770|gb|EFG74495.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=199
Score = 298 bits (762), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 149/188 (80%), Positives = 164/188 (88%), Gaps = 1/188 (0%)
Query 1 LQRFAENLVFTEAPKLVRHLQNTQETLRTIRQAVKITANIMTTAVPSPPAEIAAGRPVTS 60
QRFAENLVF AP+L RH+QN+Q LR ++QAVKITAN++ A P P + AGRPVTS
Sbjct 12 FQRFAENLVFDRAPRLARHVQNSQTVLRELQQAVKITANVIAAAAPQP-PAVTAGRPVTS 70
Query 61 TSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLL 120
S PTA RAR+LVYAPDLDGRADPGEIVWTWV YE DPTRGKDRPVLVVGRDR VLLGL+
Sbjct 71 ASFPTAQRARKLVYAPDLDGRADPGEIVWTWVVYEDDPTRGKDRPVLVVGRDRRVLLGLM 130
Query 121 VSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAA 180
VSSQERHA DRDW+GIGSGAWDYEGR SWVRLDRVLDVPEESIRREGAIL+RE+FD+VA
Sbjct 131 VSSQERHAEDRDWIGIGSGAWDYEGRPSWVRLDRVLDVPEESIRREGAILDREIFDLVAE 190
Query 181 RLRADYAW 188
RLRADY+W
Sbjct 191 RLRADYSW 198
>gi|15841922|ref|NP_336959.1| hypothetical protein MT2477 [Mycobacterium tuberculosis CDC1551]
gi|13882192|gb|AAK46773.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
Length=149
Score = 294 bits (753), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 149/149 (100%), Positives = 149/149 (100%), Gaps = 0/149 (0%)
Query 41 MTTAVPSPPAEIAAGRPVTSTSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTR 100
MTTAVPSPPAEIAAGRPVTSTSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTR
Sbjct 1 MTTAVPSPPAEIAAGRPVTSTSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTR 60
Query 101 GKDRPVLVVGRDRSVLLGLLVSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPE 160
GKDRPVLVVGRDRSVLLGLLVSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPE
Sbjct 61 GKDRPVLVVGRDRSVLLGLLVSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPE 120
Query 161 ESIRREGAILEREVFDVVAARLRADYAWR 189
ESIRREGAILEREVFDVVAARLRADYAWR
Sbjct 121 ESIRREGAILEREVFDVVAARLRADYAWR 149
>gi|118465524|ref|YP_881001.1| hypothetical protein MAV_1777 [Mycobacterium avium 104]
gi|254774595|ref|ZP_05216111.1| hypothetical protein MaviaA2_07988 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118166811|gb|ABK67708.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=200
Score = 289 bits (739), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 147/188 (79%), Positives = 161/188 (86%), Gaps = 0/188 (0%)
Query 1 LQRFAENLVFTEAPKLVRHLQNTQETLRTIRQAVKITANIMTTAVPSPPAEIAAGRPVTS 60
QRFAENLVF AP+LVRH+QN+Q LR ++QAVKITAN++ A P PP GRPVT
Sbjct 12 FQRFAENLVFDRAPRLVRHVQNSQTVLRELQQAVKITANVIAAAAPPPPDTAVLGRPVTR 71
Query 61 TSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLL 120
+S PTA RAR+LVYAP LDGRADPGEIVWTWV YE DP+RGKDRPVLVVGRDRS LLGL+
Sbjct 72 SSLPTAQRARKLVYAPKLDGRADPGEIVWTWVVYEDDPSRGKDRPVLVVGRDRSTLLGLM 131
Query 121 VSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAA 180
VSSQERHAAD +WVGIGSG+WDYEGR SWVRLDRVL VPEE IRREGAIL+REVFDVVAA
Sbjct 132 VSSQERHAADPEWVGIGSGSWDYEGRPSWVRLDRVLVVPEEGIRREGAILDREVFDVVAA 191
Query 181 RLRADYAW 188
RLRA YAW
Sbjct 192 RLRAQYAW 199
>gi|336458248|gb|EGO37229.1| PemK-like protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=200
Score = 289 bits (739), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 147/188 (79%), Positives = 161/188 (86%), Gaps = 0/188 (0%)
Query 1 LQRFAENLVFTEAPKLVRHLQNTQETLRTIRQAVKITANIMTTAVPSPPAEIAAGRPVTS 60
QRFAENLVF AP+LVRH+QN+Q LR ++QAVKITAN++ A P PP GRPVT
Sbjct 12 FQRFAENLVFDRAPRLVRHVQNSQTVLRELQQAVKITANVIAAAAPPPPDTAVLGRPVTR 71
Query 61 TSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLL 120
+S PTA RAR+LVYAP LDGRADPGEIVWTWV YE DP+RGKDRPVLVVGRDRS LLGL+
Sbjct 72 SSLPTAQRARKLVYAPKLDGRADPGEIVWTWVVYEDDPSRGKDRPVLVVGRDRSTLLGLM 131
Query 121 VSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAA 180
VSSQERHAAD +WVGIGSG+WDYEGR SWVRLDRVL VPEE IRREGAIL+REVFDVVAA
Sbjct 132 VSSQERHAADPEWVGIGSGSWDYEGRPSWVRLDRVLVVPEEGIRREGAILDREVFDVVAA 191
Query 181 RLRADYAW 188
RLRA YAW
Sbjct 192 RLRAQYAW 199
>gi|41408316|ref|NP_961152.1| hypothetical protein MAP2218 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396672|gb|AAS04535.1| hypothetical protein MAP_2218 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=204
Score = 288 bits (736), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 147/188 (79%), Positives = 161/188 (86%), Gaps = 0/188 (0%)
Query 1 LQRFAENLVFTEAPKLVRHLQNTQETLRTIRQAVKITANIMTTAVPSPPAEIAAGRPVTS 60
QRFAENLVF AP+LVRH+QN+Q LR ++QAVKITAN++ A P PP GRPVT
Sbjct 16 FQRFAENLVFDRAPRLVRHVQNSQTVLRELQQAVKITANVIAAAAPPPPDTAVLGRPVTR 75
Query 61 TSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLL 120
+S PTA RAR+LVYAP LDGRADPGEIVWTWV YE DP+RGKDRPVLVVGRDRS LLGL+
Sbjct 76 SSLPTAQRARKLVYAPKLDGRADPGEIVWTWVVYEDDPSRGKDRPVLVVGRDRSTLLGLM 135
Query 121 VSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAA 180
VSSQERHAAD +WVGIGSG+WDYEGR SWVRLDRVL VPEE IRREGAIL+REVFDVVAA
Sbjct 136 VSSQERHAADPEWVGIGSGSWDYEGRPSWVRLDRVLVVPEEGIRREGAILDREVFDVVAA 195
Query 181 RLRADYAW 188
RLRA YAW
Sbjct 196 RLRAQYAW 203
>gi|118618936|ref|YP_907268.1| hypothetical protein MUL_3668 [Mycobacterium ulcerans Agy99]
gi|118571046|gb|ABL05797.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=181
Score = 288 bits (736), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 137/181 (76%), Positives = 161/181 (89%), Gaps = 0/181 (0%)
Query 9 VFTEAPKLVRHLQNTQETLRTIRQAVKITANIMTTAVPSPPAEIAAGRPVTSTSCPTAAR 68
+F EAPK+V LQNTQETLRTI+QAVKITANI+ +P PPAEI AGRPVT TS PTAAR
Sbjct 1 MFNEAPKVVHRLQNTQETLRTIQQAVKITANIVAMGLPPPPAEITAGRPVTDTSSPTAAR 60
Query 69 ARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLLVSSQERHA 128
AR+L Y+PD DGRADPGEIVWTWV YE DPT+G+DRPVLVVGR+R+VLL L++SSQE+++
Sbjct 61 ARKLTYSPDHDGRADPGEIVWTWVVYEDDPTQGQDRPVLVVGRERNVLLALMLSSQEQYS 120
Query 129 ADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAARLRADYAW 188
AD DWV IG+G WD+EG++ WVRLDRVLDVPEESIRR+GAIL+R+VFDVVAARLRA+Y W
Sbjct 121 ADPDWVAIGTGDWDFEGQQGWVRLDRVLDVPEESIRRQGAILQRDVFDVVAARLRAEYGW 180
Query 189 R 189
R
Sbjct 181 R 181
>gi|342857803|ref|ZP_08714459.1| hypothetical protein MCOL_02965 [Mycobacterium colombiense CECT
3035]
gi|342135136|gb|EGT88302.1| hypothetical protein MCOL_02965 [Mycobacterium colombiense CECT
3035]
Length=181
Score = 274 bits (701), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 136/181 (76%), Positives = 155/181 (86%), Gaps = 0/181 (0%)
Query 9 VFTEAPKLVRHLQNTQETLRTIRQAVKITANIMTTAVPSPPAEIAAGRPVTSTSCPTAAR 68
+F AP+LVR +QN+Q LR ++QAV+ITAN++ P+P +GRPVTS S PTA R
Sbjct 1 MFNGAPRLVRQVQNSQTVLRELQQAVRITANVIAAVAPAPAEAPVSGRPVTSGSLPTAHR 60
Query 69 ARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLLVSSQERHA 128
AR+LVYAP LDGRADPGEIVWTWV +E DPTRGKDRPVLVVGRDRS+LLGL+VSSQERHA
Sbjct 61 ARKLVYAPSLDGRADPGEIVWTWVVFEDDPTRGKDRPVLVVGRDRSILLGLMVSSQERHA 120
Query 129 ADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAARLRADYAW 188
DRDW+GIGSG WDYEGR SWVRLDRVLDVPEE IRREGAIL+RE+FD VAARLRADY+W
Sbjct 121 TDRDWIGIGSGPWDYEGRPSWVRLDRVLDVPEEGIRREGAILDREIFDAVAARLRADYSW 180
Query 189 R 189
R
Sbjct 181 R 181
>gi|333990146|ref|YP_004522760.1| hypothetical protein JDM601_1506 [Mycobacterium sp. JDM601]
gi|333486114|gb|AEF35506.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=193
Score = 268 bits (685), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 134/192 (70%), Positives = 152/192 (80%), Gaps = 4/192 (2%)
Query 1 LQRFAENLVFTEAPKLVRHLQNT----QETLRTIRQAVKITANIMTTAVPSPPAEIAAGR 56
+QRFAENLVF EAP+ +R L+ Q R I Q +K+ ++T P I AGR
Sbjct 1 MQRFAENLVFNEAPRFIRQLEQAPLVQQRIQRGIEQGIKLGLEVLTGTASDPSPAIPAGR 60
Query 57 PVTSTSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVL 116
PVT++S PTA RARRLVYAPDL+GRADPGEIVWTWVAYE DP GKDRPVLVVGRDRSVL
Sbjct 61 PVTNSSVPTAHRARRLVYAPDLNGRADPGEIVWTWVAYEDDPREGKDRPVLVVGRDRSVL 120
Query 117 LGLLVSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFD 176
LGL++SSQ RHA D +W+GIG+G+WD R SWVRLDRVLDVPEESIRREGAILER VFD
Sbjct 121 LGLMLSSQPRHAEDTNWLGIGAGSWDEAHRLSWVRLDRVLDVPEESIRREGAILERTVFD 180
Query 177 VVAARLRADYAW 188
VVAARLR+DYAW
Sbjct 181 VVAARLRSDYAW 192
>gi|145223259|ref|YP_001133937.1| hypothetical protein Mflv_2672 [Mycobacterium gilvum PYR-GCK]
gi|315443719|ref|YP_004076598.1| hypothetical protein Mspyr1_21090 [Mycobacterium sp. Spyr1]
gi|145215745|gb|ABP45149.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
gi|315262022|gb|ADT98763.1| hypothetical protein Mspyr1_21090 [Mycobacterium sp. Spyr1]
Length=203
Score = 260 bits (665), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 129/192 (68%), Positives = 148/192 (78%), Gaps = 4/192 (2%)
Query 1 LQRF----AENLVFTEAPKLVRHLQNTQETLRTIRQAVKITANIMTTAVPSPPAEIAAGR 56
QRF ENLVF EAPK+VR LQ + R I Q ++I ++++ PS + AGR
Sbjct 11 FQRFLVKGTENLVFNEAPKIVRQLQRSDTLQRGIAQGIRIGLDVLSGPAPSNTPALPAGR 70
Query 57 PVTSTSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVL 116
PV+ PTA RAR++ Y+PDLDGRADPGEIVWTWVA+E DPTRGKDRPVLVVGRD VL
Sbjct 71 PVSRNFVPTAHRARKVSYSPDLDGRADPGEIVWTWVAFEDDPTRGKDRPVLVVGRDGRVL 130
Query 117 LGLLVSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFD 176
LGL++SSQ+ H D WVGIGSG WDYEGR SWVRLDRVLDVPEE IRREGAIL REVFD
Sbjct 131 LGLMLSSQDHHRGDPQWVGIGSGTWDYEGRSSWVRLDRVLDVPEEGIRREGAILAREVFD 190
Query 177 VVAARLRADYAW 188
VVAARLRA+Y+W
Sbjct 191 VVAARLRAEYSW 202
>gi|120404840|ref|YP_954669.1| hypothetical protein Mvan_3882 [Mycobacterium vanbaalenii PYR-1]
gi|119957658|gb|ABM14663.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=206
Score = 259 bits (663), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 125/192 (66%), Positives = 152/192 (80%), Gaps = 4/192 (2%)
Query 1 LQRF----AENLVFTEAPKLVRHLQNTQETLRTIRQAVKITANIMTTAVPSPPAEIAAGR 56
QRF ENLVF EAPKLVR LQ + R I+Q ++I +++ + + AGR
Sbjct 14 FQRFLVKGTENLVFNEAPKLVRQLQKSDTVARGIQQGIRIGLDVLAGQAQTGAPALPAGR 73
Query 57 PVTSTSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVL 116
PV+S PTA RAR++ YAP+LDGRADPGEIVWTWVA+E DPT+GKDRPVLVVGRDR++L
Sbjct 74 PVSSNFVPTAHRARKVSYAPNLDGRADPGEIVWTWVAFEDDPTQGKDRPVLVVGRDRNIL 133
Query 117 LGLLVSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFD 176
GL++SS++ H D +WVGIG+G+WDY+GR SWVRLDRVLDVPEESIRREGAILER VFD
Sbjct 134 FGLMLSSRDHHGDDPNWVGIGAGSWDYDGRPSWVRLDRVLDVPEESIRREGAILERVVFD 193
Query 177 VVAARLRADYAW 188
VVAARLRA+Y+W
Sbjct 194 VVAARLRAEYSW 205
>gi|108800460|ref|YP_640657.1| hypothetical protein Mmcs_3494 [Mycobacterium sp. MCS]
gi|119869589|ref|YP_939541.1| hypothetical protein Mkms_3557 [Mycobacterium sp. KMS]
gi|108770879|gb|ABG09601.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119695678|gb|ABL92751.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=207
Score = 253 bits (646), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 126/195 (65%), Positives = 149/195 (77%), Gaps = 7/195 (3%)
Query 1 LQRFAENLVFTEAPKLVRHLQNTQETLRTIRQAVK------ITANIMTTAVPSPPA-EIA 53
QR AE LVF EAPK++R LQ ++ RT++Q ++ + + SPP IA
Sbjct 12 FQRLAEKLVFQEAPKVIRQLQQSENRPRTVQQGIQQGLKIGLGVGLSLAGASSPPQPAIA 71
Query 54 AGRPVTSTSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDR 113
AGRPVTS S PTA RAR++VYAPDLDGRADPGEIVWTWV YE DPTRGKDRPVLVVGRDR
Sbjct 72 AGRPVTSNSVPTAHRARKIVYAPDLDGRADPGEIVWTWVVYEDDPTRGKDRPVLVVGRDR 131
Query 114 SVLLGLLVSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILERE 173
LLGL++SSQ+ D +WV IG+G+WDY+GR SWVRLDRVLDVPEE IRREGAIL+R
Sbjct 132 RTLLGLMLSSQDHRGDDPNWVAIGAGSWDYDGRVSWVRLDRVLDVPEEGIRREGAILDRA 191
Query 174 VFDVVAARLRADYAW 188
F+ VAARLRA+Y+W
Sbjct 192 RFEAVAARLRAEYSW 206
>gi|126436084|ref|YP_001071775.1| hypothetical protein Mjls_3507 [Mycobacterium sp. JLS]
gi|126235884|gb|ABN99284.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=203
Score = 253 bits (645), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 126/195 (65%), Positives = 149/195 (77%), Gaps = 7/195 (3%)
Query 1 LQRFAENLVFTEAPKLVRHLQNTQETLRTIRQAVK------ITANIMTTAVPSPPA-EIA 53
QR AE LVF EAPK++R LQ ++ RT++Q ++ + + SPP IA
Sbjct 8 FQRLAEKLVFQEAPKVIRQLQQSENRPRTVQQGIQQGLKIGLGVGLSLAGASSPPQPAIA 67
Query 54 AGRPVTSTSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDR 113
AGRPVTS S PTA RAR++VYAPDLDGRADPGEIVWTWV YE DPTRGKDRPVLVVGRDR
Sbjct 68 AGRPVTSNSVPTAHRARKIVYAPDLDGRADPGEIVWTWVVYEDDPTRGKDRPVLVVGRDR 127
Query 114 SVLLGLLVSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILERE 173
LLGL++SSQ+ D +WV IG+G+WDY+GR SWVRLDRVLDVPEE IRREGAIL+R
Sbjct 128 RTLLGLMLSSQDHRGDDPNWVAIGAGSWDYDGRVSWVRLDRVLDVPEEGIRREGAILDRA 187
Query 174 VFDVVAARLRADYAW 188
F+ VAARLRA+Y+W
Sbjct 188 RFEAVAARLRAEYSW 202
>gi|118469249|ref|YP_888828.1| hypothetical protein MSMEG_4558 [Mycobacterium smegmatis str.
MC2 155]
gi|118170536|gb|ABK71432.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=211
Score = 238 bits (606), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 119/195 (62%), Positives = 142/195 (73%), Gaps = 12/195 (6%)
Query 6 ENLVFTEAPKLVRHLQNTQETLRTI------------RQAVKITANIMTTAVPSPPAEIA 53
ENLVF EAPK VR LQ + RT+ R + + A+ + A + I
Sbjct 16 ENLVFNEAPKFVRQLQKSDNVPRTVQQGIQQGIQQGLRLGIDVLASGLAGATANNAPAIT 75
Query 54 AGRPVTSTSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDR 113
AGRPV+ + PTA RAR++VY+PDLDGRADPGEIVWTWV YE DPT+GKDRPVLVVGRD
Sbjct 76 AGRPVSKHAVPTAHRARKVVYSPDLDGRADPGEIVWTWVVYEDDPTKGKDRPVLVVGRDH 135
Query 114 SVLLGLLVSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILERE 173
LLGL++SSQE + D +WVGIG+G WDY+GR SWVRLDRVLDVPEE IRREGAIL+R
Sbjct 136 RTLLGLMLSSQEHRSDDPNWVGIGTGTWDYDGRPSWVRLDRVLDVPEEGIRREGAILDRV 195
Query 174 VFDVVAARLRADYAW 188
F+VVA RLRA+Y+W
Sbjct 196 RFEVVAERLRAEYSW 210
>gi|169628729|ref|YP_001702378.1| hypothetical protein MAB_1639c [Mycobacterium abscessus ATCC
19977]
gi|169240696|emb|CAM61724.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=199
Score = 224 bits (572), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 114/186 (62%), Positives = 142/186 (77%), Gaps = 11/186 (5%)
Query 6 ENLVFTEAPKLVRHLQNTQETLRTIR---QAVKITANIMTTAVPSPPAEIAAGRPVTSTS 62
E +VF E PK++R LQ ++ R ++ +A+ + TA+P GRPVT+ S
Sbjct 21 EQVVFREGPKVLRQLQGSEFVQRGLQLGLEAIGVVEPEQQTAIP--------GRPVTNRS 72
Query 63 CPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLLVS 122
PTA RARR+ Y+PDLDGRADPGEIVWTWV YE DP +GKDRPVLVVGRD ++LLGL++S
Sbjct 73 VPTAHRARRIEYSPDLDGRADPGEIVWTWVVYEDDPAQGKDRPVLVVGRDGALLLGLMLS 132
Query 123 SQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAARL 182
S+ER +D DWV +GSG+WDY+GR SWVRLDRVLDVPEE IRREGAIL+ E F+VVAARL
Sbjct 133 SRERLDSDPDWVALGSGSWDYDGRPSWVRLDRVLDVPEEGIRREGAILDVERFNVVAARL 192
Query 183 RADYAW 188
RA ++W
Sbjct 193 RAQFSW 198
>gi|111018289|ref|YP_701261.1| hypothetical protein RHA1_ro01279 [Rhodococcus jostii RHA1]
gi|110817819|gb|ABG93103.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=176
Score = 219 bits (559), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/182 (59%), Positives = 138/182 (76%), Gaps = 9/182 (4%)
Query 8 LVFTEAPKLVRHLQNTQETLRTIRQAVKITANIMTTAVPSPPAEIAAGRPVTSTSCPTAA 67
L + P+L++ LQ + A+ A ++T + S P + A GRPVT+ S PTA
Sbjct 4 LARDKGPQLIQALQKSG--------ALDRAAGVLTGSTASAP-KPAPGRPVTANSAPTAH 54
Query 68 RARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLLVSSQERH 127
RAR++ Y+PDLDGRADPGEIVWTWVAYE+DP++GKDRPVLVVGRD LLGL++SSQ +H
Sbjct 55 RARKVEYSPDLDGRADPGEIVWTWVAYEEDPSQGKDRPVLVVGRDGDTLLGLMLSSQSKH 114
Query 128 AADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAARLRADYA 187
DRDW+ +GSGAWD EGR SW+RLDRVLDVPE IRREGA++ R+ F++VA RLRAD++
Sbjct 115 DGDRDWIAVGSGAWDAEGRPSWIRLDRVLDVPEAGIRREGAVMARDKFEIVARRLRADFS 174
Query 188 WR 189
W+
Sbjct 175 WQ 176
>gi|226360413|ref|YP_002778191.1| hypothetical protein ROP_09990 [Rhodococcus opacus B4]
gi|226238898|dbj|BAH49246.1| hypothetical protein [Rhodococcus opacus B4]
Length=187
Score = 215 bits (547), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 105/182 (58%), Positives = 137/182 (76%), Gaps = 9/182 (4%)
Query 8 LVFTEAPKLVRHLQNTQETLRTIRQAVKITANIMTTAVPSPPAEIAAGRPVTSTSCPTAA 67
L + P+L+ LQ + A+ A ++T + + P + A GRPVT+ S PTA
Sbjct 15 LARDKGPQLLAQLQKSG--------ALDRAAGVLTGSTAAAP-KPAPGRPVTANSAPTAH 65
Query 68 RARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLLVSSQERH 127
RAR++ Y+PDLDGRADPGEIVWTWVAYE+D ++GKDRPVLVVGRD LLGL++SSQ +H
Sbjct 66 RARKVEYSPDLDGRADPGEIVWTWVAYEEDASQGKDRPVLVVGRDGDTLLGLMLSSQSKH 125
Query 128 AADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAARLRADYA 187
DRDW+ +GSG+WD EGR SW+RLDRVLDVPE IRREGA+++R+ F+VVA RLRAD++
Sbjct 126 DGDRDWIAVGSGSWDAEGRPSWIRLDRVLDVPEAGIRREGAVMDRDKFEVVARRLRADFS 185
Query 188 WR 189
W+
Sbjct 186 WQ 187
>gi|226307249|ref|YP_002767209.1| hypothetical protein RER_37620 [Rhodococcus erythropolis PR4]
gi|226186366|dbj|BAH34470.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=161
Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 93/135 (69%), Positives = 116/135 (86%), Gaps = 0/135 (0%)
Query 54 AGRPVTSTSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDR 113
+GRP+ + + PTA RAR++ Y+PDLDG+ADPGEIVWTWVAYE+DPT+GKDRPVLVVGRD
Sbjct 26 SGRPIAARTSPTAHRARKVEYSPDLDGKADPGEIVWTWVAYEEDPTQGKDRPVLVVGRDG 85
Query 114 SVLLGLLVSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILERE 173
+ LLGL++SSQ + +RDW+ IGSG WD EGR SWVRLDRVLDVPE IRREGA+++ +
Sbjct 86 NTLLGLMLSSQSKREGERDWLAIGSGPWDGEGRPSWVRLDRVLDVPESGIRREGAVMDHK 145
Query 174 VFDVVAARLRADYAW 188
FDVVAA+LRAD++W
Sbjct 146 KFDVVAAKLRADFSW 160
>gi|312140317|ref|YP_004007653.1| hypothetical protein REQ_29570 [Rhodococcus equi 103S]
gi|311889656|emb|CBH48973.1| conserved hypothetical protein [Rhodococcus equi 103S]
Length=213
Score = 201 bits (511), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 102/182 (57%), Positives = 128/182 (71%), Gaps = 13/182 (7%)
Query 7 NLVFTEAPKLVRHLQNTQETLRTIRQAVKITANIMTTAVPSPPAEIAAGRPVTSTSCPTA 66
+ T+ PKL+R +QNT R T A+ PP+ + GRPV+ + PTA
Sbjct 44 DFAVTQGPKLLRQVQNTPAVKRA------------TAALAGPPSGVP-GRPVSRRTSPTA 90
Query 67 ARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLLVSSQER 126
RARR+ YAPDLDGRADPGEIVWTWV YE+DP +GKDRPVLVVGRD + LLGL++SS
Sbjct 91 HRARRIEYAPDLDGRADPGEIVWTWVTYEEDPGQGKDRPVLVVGRDGNTLLGLMLSSNSE 150
Query 127 HAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAARLRADY 186
+ +W+ +G+G WD + R SWVRLDRVLDVPE IRREGA+L+ + F+ VAARLRADY
Sbjct 151 RDDEPNWLALGTGPWDADSRPSWVRLDRVLDVPEAGIRREGAVLDVDRFETVAARLRADY 210
Query 187 AW 188
+W
Sbjct 211 SW 212
>gi|325677108|ref|ZP_08156777.1| hypothetical protein HMPREF0724_14560 [Rhodococcus equi ATCC
33707]
gi|325552093|gb|EGD21786.1| hypothetical protein HMPREF0724_14560 [Rhodococcus equi ATCC
33707]
Length=183
Score = 201 bits (510), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 102/183 (56%), Positives = 128/183 (70%), Gaps = 13/183 (7%)
Query 7 NLVFTEAPKLVRHLQNTQETLRTIRQAVKITANIMTTAVPSPPAEIAAGRPVTSTSCPTA 66
+ T+ PKL+R +QNT R T A+ PP+ + GRPV+ + PTA
Sbjct 14 DFAVTQGPKLLRQVQNTPAVKRA------------TAALAGPPSGVP-GRPVSRRTSPTA 60
Query 67 ARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLLVSSQER 126
RARR+ YAPDLDGRADPGEIVWTWV YE+DP +GKDRPVLVVGRD + LLGL++SS
Sbjct 61 HRARRIEYAPDLDGRADPGEIVWTWVTYEEDPGQGKDRPVLVVGRDGNTLLGLMLSSNSE 120
Query 127 HAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAARLRADY 186
+ +W+ +G+G WD + R SWVRLDRVLDVPE IRREGA+L+ + F+ VAARLRADY
Sbjct 121 RDDEPNWLALGTGPWDADSRPSWVRLDRVLDVPEAGIRREGAVLDVDRFETVAARLRADY 180
Query 187 AWR 189
+W
Sbjct 181 SWH 183
>gi|229493186|ref|ZP_04386978.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229319917|gb|EEN85746.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=174
Score = 201 bits (510), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 92/135 (69%), Positives = 114/135 (85%), Gaps = 0/135 (0%)
Query 54 AGRPVTSTSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDR 113
+GRP+ + + PTA RAR++ Y+PDLDG+ADPGEIVWTWVAYE+DPT+GKDRPVLVVGRD
Sbjct 39 SGRPIAARTSPTAHRARKVEYSPDLDGKADPGEIVWTWVAYEEDPTQGKDRPVLVVGRDG 98
Query 114 SVLLGLLVSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILERE 173
LLGL++SSQ + +RDW+ IGSG WD EGR SWVRLDRVLDVPE IRREGA+++ +
Sbjct 99 DTLLGLMLSSQSKRQGERDWLAIGSGPWDGEGRPSWVRLDRVLDVPESGIRREGAVMDHK 158
Query 174 VFDVVAARLRADYAW 188
FD VAA+LRAD++W
Sbjct 159 KFDAVAAKLRADFSW 173
>gi|54023365|ref|YP_117607.1| hypothetical protein nfa13980 [Nocardia farcinica IFM 10152]
gi|54014873|dbj|BAD56243.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=206
Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 90/133 (68%), Positives = 105/133 (79%), Gaps = 0/133 (0%)
Query 56 RPVTSTSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSV 115
RP S PT RARR+VY+P LDGRADPGEIVWTWV YE+DP GKDRPVLVVGRD+
Sbjct 73 RPAASVPVPTEQRARRIVYSPHLDGRADPGEIVWTWVPYEEDPRNGKDRPVLVVGRDKRT 132
Query 116 LLGLLVSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVF 175
LLGL++SS A DR+W+ IGSG+WD++GR SWVRLDRVLDVPE IRREGA+L R+ F
Sbjct 133 LLGLMLSSNPERAHDRNWLAIGSGSWDHQGRPSWVRLDRVLDVPEAGIRREGAVLARKTF 192
Query 176 DVVAARLRADYAW 188
D+VA RL +Y W
Sbjct 193 DLVAHRLVVEYNW 205
>gi|319949557|ref|ZP_08023604.1| hypothetical protein ES5_08891 [Dietzia cinnamea P4]
gi|319436775|gb|EFV91848.1| hypothetical protein ES5_08891 [Dietzia cinnamea P4]
Length=189
Score = 187 bits (474), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 91/137 (67%), Positives = 108/137 (79%), Gaps = 0/137 (0%)
Query 53 AAGRPVTSTSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRD 112
A GRP T+ + PT++RAR + Y PDLDG ADPGEIVWTWV +E++ RGKDRPVLVVGRD
Sbjct 53 APGRPATTRTAPTSSRARTISYTPDLDGHADPGEIVWTWVEFEENDGRGKDRPVLVVGRD 112
Query 113 RSVLLGLLVSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILER 172
LLGL +SS+++ D +W+G+GSG WD EGR SWVRLDRVLDVPE+ IRREGAI R
Sbjct 113 GDRLLGLQLSSRDKRDDDEEWLGLGSGPWDSEGRPSWVRLDRVLDVPEQGIRREGAICPR 172
Query 173 EVFDVVAARLRADYAWR 189
+ FD VA RLRADY WR
Sbjct 173 QKFDAVADRLRADYGWR 189
>gi|296140489|ref|YP_003647732.1| hypothetical protein Tpau_2795 [Tsukamurella paurometabola DSM
20162]
gi|296028623|gb|ADG79393.1| conserved hypothetical protein [Tsukamurella paurometabola DSM
20162]
Length=205
Score = 181 bits (459), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/185 (54%), Positives = 123/185 (67%), Gaps = 12/185 (6%)
Query 9 VFTEAPKLVRHLQNTQETLRTIRQAVKITANIMTTAVPSPPA-EIAAGRPVTSTSCPTAA 67
V AP TQ +T+ QA+ + P+ PA E GRPVT TS T
Sbjct 27 VLDSAPVRAGREALTQVVTQTVNQALGLEQ-------PAAPAKEFTPGRPVTRTSTRTEL 79
Query 68 RARRLVYAPDLDGRADPGEIVWTWVAYEQ----DPTRGKDRPVLVVGRDRSVLLGLLVSS 123
AR + YAP LDGRADPGE+VWTWV +E+ + +GKDRPVLVVGR + LLGL++SS
Sbjct 80 MARAIAYAPQLDGRADPGEVVWTWVEFEETTGPNAGQGKDRPVLVVGRSGASLLGLMLSS 139
Query 124 QERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAARLR 183
Q +H D +WV IG+G WD + R SWVRLDRVLDVPE+ IRREG++L+R F++VAARLR
Sbjct 140 QAKHDGDPEWVSIGTGTWDDDRRPSWVRLDRVLDVPEDGIRREGSVLDRTRFELVAARLR 199
Query 184 ADYAW 188
ADY W
Sbjct 200 ADYGW 204
>gi|324998893|ref|ZP_08120005.1| hypothetical protein PseP1_09019 [Pseudonocardia sp. P1]
Length=176
Score = 175 bits (443), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/138 (63%), Positives = 108/138 (79%), Gaps = 2/138 (1%)
Query 53 AAGRPVTST--SCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVG 110
G P T+ + PT RAR++ YAP+ DG ADPGEIVWTWV YE+DP++GKDRP+LVVG
Sbjct 38 GGGAPATAPVRTAPTGDRARKVAYAPEPDGAADPGEIVWTWVPYEEDPSQGKDRPLLVVG 97
Query 111 RDRSVLLGLLVSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAIL 170
R + LLGL++SSQ+R A D DWVGIGSGAWD EGR+S++RLDRVL++ E IRREGA+L
Sbjct 98 RSGAELLGLMLSSQDRRADDPDWVGIGSGAWDREGRDSYIRLDRVLEIDEHGIRREGAVL 157
Query 171 EREVFDVVAARLRADYAW 188
+R FD VA +LR+ Y W
Sbjct 158 DRSRFDRVADQLRSRYGW 175
>gi|262203069|ref|YP_003274277.1| hypothetical protein Gbro_3179 [Gordonia bronchialis DSM 43247]
gi|262086416|gb|ACY22384.1| hypothetical protein Gbro_3179 [Gordonia bronchialis DSM 43247]
Length=140
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/138 (59%), Positives = 98/138 (72%), Gaps = 5/138 (3%)
Query 57 PVTSTSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSV- 115
P T PTA AR + Y P LDG ADPGEIVWT V +E DPT+GKDRPVLVVGRD
Sbjct 3 PRTPQPHPTAHLAREISYTPALDGDADPGEIVWTRVEFEDDPTQGKDRPVLVVGRDSHAE 62
Query 116 ----LLGLLVSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILE 171
+LGL++SS++ H D DW+ +G+GAWD E RES+VRLDRVL V + IRREGAIL+
Sbjct 63 SSDDVLGLMLSSKDYHRGDDDWISVGTGAWDGEHRESFVRLDRVLVVDADGIRREGAILD 122
Query 172 REVFDVVAARLRADYAWR 189
R+ FD VA LR+ + WR
Sbjct 123 RQRFDSVATELRSRFGWR 140
>gi|326381592|ref|ZP_08203286.1| hypothetical protein SCNU_01535 [Gordonia neofelifaecis NRRL
B-59395]
gi|326199839|gb|EGD57019.1| hypothetical protein SCNU_01535 [Gordonia neofelifaecis NRRL
B-59395]
Length=133
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/125 (63%), Positives = 94/125 (76%), Gaps = 0/125 (0%)
Query 64 PTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLLVSS 123
PT AR + YAPDLDG ADPGEIVWTWV +E DP++GKDRPVLVVGR+ LLGL++SS
Sbjct 8 PTRDFARTVAYAPDLDGAADPGEIVWTWVPFEDDPSQGKDRPVLVVGREGDHLLGLMLSS 67
Query 124 QERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAARLR 183
++ H D +W+ IGSG+WD E RES+VRLDRVL + E IRREGAI +R FD VA LR
Sbjct 68 KDYHRGDDEWLSIGSGSWDAERRESFVRLDRVLRIAETGIRREGAICDRPQFDAVARVLR 127
Query 184 ADYAW 188
+ W
Sbjct 128 ERFGW 132
>gi|315506326|ref|YP_004085213.1| hypothetical protein ML5_5601 [Micromonospora sp. L5]
gi|315412945|gb|ADU11062.1| hypothetical protein ML5_5601 [Micromonospora sp. L5]
Length=164
Score = 154 bits (388), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/156 (54%), Positives = 102/156 (66%), Gaps = 13/156 (8%)
Query 41 MTTAVPSP-------PAEIAAGRPVTSTSCPTAARARRLVYAPDLDGRADPGEIVWTWVA 93
+T VP+P PA++A R V+ A + R L YAP+ DG+ADPGEIVWTWV
Sbjct 15 ITRGVPAPTRTGGPIPAQVARRRQVS------ALQRRELSYAPEPDGQADPGEIVWTWVP 68
Query 94 YEQDPTRGKDRPVLVVGRDRSVLLGLLVSSQERHAADRDWVGIGSGAWDYEGRESWVRLD 153
YE DP +GKDRPVLVVGR L GL++SSQ R W+ +G G WD + R SWVRLD
Sbjct 69 YEDDPRQGKDRPVLVVGRHSRTLFGLMLSSQSDRDGQRHWLALGPGEWDRDSRPSWVRLD 128
Query 154 RVLDVPEESIRREGAILEREVFDVVAARLRADYAWR 189
RVL + E+SIRREGA+L+R FD V LRA Y WR
Sbjct 129 RVLTMREDSIRREGAVLDRPRFDRVGQALRAGYGWR 164
>gi|302867268|ref|YP_003835905.1| hypothetical protein Micau_2795 [Micromonospora aurantiaca ATCC
27029]
gi|302570127|gb|ADL46329.1| hypothetical protein Micau_2795 [Micromonospora aurantiaca ATCC
27029]
Length=164
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/156 (54%), Positives = 102/156 (66%), Gaps = 13/156 (8%)
Query 41 MTTAVPSP-------PAEIAAGRPVTSTSCPTAARARRLVYAPDLDGRADPGEIVWTWVA 93
+T VP+P PA++A R V+ A + R L YAP+ DG+ADPGEIVWTWV
Sbjct 15 ITRVVPAPARTGGPIPAQVARRRQVS------ALQRRELSYAPEPDGQADPGEIVWTWVP 68
Query 94 YEQDPTRGKDRPVLVVGRDRSVLLGLLVSSQERHAADRDWVGIGSGAWDYEGRESWVRLD 153
YE DP +GKDRPVLVVGR L GL++SSQ R W+ +G G WD + R SWVRLD
Sbjct 69 YEDDPRQGKDRPVLVVGRHSRTLFGLMLSSQSDRDGQRHWLALGPGEWDRDSRPSWVRLD 128
Query 154 RVLDVPEESIRREGAILEREVFDVVAARLRADYAWR 189
RVL + E+SIRREGA+L+R FD V LRA Y WR
Sbjct 129 RVLTMREDSIRREGAVLDRPRFDRVGQALRAGYGWR 164
>gi|238064411|ref|ZP_04609120.1| hypothetical protein MCAG_05377 [Micromonospora sp. ATCC 39149]
gi|237886222|gb|EEP75050.1| hypothetical protein MCAG_05377 [Micromonospora sp. ATCC 39149]
Length=192
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/148 (57%), Positives = 99/148 (67%), Gaps = 7/148 (4%)
Query 43 TAVPSP-PAEIAAGRPVTSTSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRG 101
T P P PA++A R V A + R L YAP+ DG+ADPGE+VWTWV YE DP +G
Sbjct 51 TRTPGPIPAQVARRRQVA------ALQRRDLSYAPEPDGQADPGEVVWTWVPYEDDPRQG 104
Query 102 KDRPVLVVGRDRSVLLGLLVSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEE 161
KDRPVLVVGR L GL++SSQ R W+ +G GAWD + R SWVRLDRVL + E+
Sbjct 105 KDRPVLVVGRSSRTLFGLMLSSQGERDGQRHWLSLGPGAWDRDNRPSWVRLDRVLTMRED 164
Query 162 SIRREGAILEREVFDVVAARLRADYAWR 189
SIRREGA+L+R FD V LRA Y WR
Sbjct 165 SIRREGAVLDRARFDRVGQALRAGYGWR 192
>gi|330467936|ref|YP_004405679.1| hypothetical protein VAB18032_19885 [Verrucosispora maris AB-18-032]
gi|328810907|gb|AEB45079.1| hypothetical protein VAB18032_19885 [Verrucosispora maris AB-18-032]
Length=152
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/157 (54%), Positives = 109/157 (70%), Gaps = 8/157 (5%)
Query 33 AVKITANIMTTAVPSP-PAEIAAGRPVTSTSCPTAARARRLVYAPDLDGRADPGEIVWTW 91
A +++A I P P PA++A R V+ A + R+L YAP+ DG+ADPGEIVWTW
Sbjct 2 AARVSAVIPAPRRPGPTPAKVARPRQVS------ALQRRQLSYAPEPDGQADPGEIVWTW 55
Query 92 VAYEQDPTRGKDRPVLVVGRDRSVLLGLLVSSQERHAADRDWVGIGSGAWDYEGRESWVR 151
V+YE DP +GKDRPVLVVGR L GL++SS++R +R W+ +G G WD + R SWVR
Sbjct 56 VSYEDDPRQGKDRPVLVVGRHSRTLFGLMLSSRDRD-GERHWLALGPGEWDRDKRPSWVR 114
Query 152 LDRVLDVPEESIRREGAILEREVFDVVAARLRADYAW 188
LDRVL + E+ IRREGA+L+R FD V+A LRA Y W
Sbjct 115 LDRVLTMREDGIRREGAVLDRPRFDRVSAALRAGYGW 151
>gi|343926795|ref|ZP_08766288.1| hypothetical protein GOALK_072_00160 [Gordonia alkanivorans NBRC
16433]
gi|343763155|dbj|GAA13214.1| hypothetical protein GOALK_072_00160 [Gordonia alkanivorans NBRC
16433]
Length=147
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/144 (56%), Positives = 98/144 (69%), Gaps = 10/144 (6%)
Query 56 RPVTSTSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSV 115
R + S PTA AR + Y P+LDG ADPGEIVWTWVAYE DP +GKDRPVLVVGRD +
Sbjct 4 RSIRSRLRPTAEVARTISYNPELDGDADPGEIVWTWVAYEDDPNQGKDRPVLVVGRDANA 63
Query 116 ----------LLGLLVSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRR 165
+LGL++SS++ H D DW +G+G WD + R S+VRLDRVL V + IRR
Sbjct 64 ETADGGTFEEVLGLMLSSKDYHRDDDDWFAVGTGTWDSQNRPSFVRLDRVLVVDADGIRR 123
Query 166 EGAILEREVFDVVAARLRADYAWR 189
EGAIL+R FD VA LR+ + WR
Sbjct 124 EGAILDRRRFDAVADELRSRFGWR 147
>gi|331696655|ref|YP_004332894.1| hypothetical protein Psed_2841 [Pseudonocardia dioxanivorans
CB1190]
gi|326951344|gb|AEA25041.1| hypothetical protein Psed_2841 [Pseudonocardia dioxanivorans
CB1190]
Length=206
Score = 147 bits (372), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/171 (51%), Positives = 114/171 (67%), Gaps = 12/171 (7%)
Query 30 IRQAVKITANIMTTAV-----PSPPAEIAAGRPVTST-------SCPTAARARRLVYAPD 77
++Q V + +++++ P P A+ PV + PTA RAR + YAPD
Sbjct 35 LKQVVDVGLKLLSSSNQQQTRPGPAPAPASREPVRRPQGHGGVRTAPTAERARTIAYAPD 94
Query 78 LDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLLVSSQERHAADRDWVGIG 137
LDG ADPGEIVW WV +E+D ++GKDRP+LVVGR LLGL++SSQ + + WV IG
Sbjct 95 LDGAADPGEIVWAWVPFEEDASQGKDRPLLVVGRGGGALLGLMLSSQHKRDGEPGWVSIG 154
Query 138 SGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAARLRADYAW 188
+GAWD EGR+S+VRLDRVL+V E IRREGAIL+R+ FD VA LR+ Y W
Sbjct 155 TGAWDREGRDSFVRLDRVLEVGEHDIRREGAILDRDRFDRVADELRSRYGW 205
>gi|259507863|ref|ZP_05750763.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259164656|gb|EEW49210.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length=209
Score = 144 bits (362), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 79/194 (41%), Positives = 112/194 (58%), Gaps = 8/194 (4%)
Query 3 RFAENLVFTEAPKLVRHLQNTQ--ETLRTIRQAVKITANIMTTAVPSPP------AEIAA 54
R E + T + + H Q T+ E+L IR + I N +A P AA
Sbjct 15 RDGEPGLLTRLFRFILHPQKTKVDESLAIIRDGLGIEENRDHSADPDQNKLSTMIGPQAA 74
Query 55 GRPVTSTSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRS 114
PT + AR L YAPD+DG+ADPGE+VW W + + ++R ++VVGR R+
Sbjct 75 PVQTEINVLPTESMARALFYAPDMDGQADPGEVVWIWAPSDGPGSPPRERAMVVVGRTRN 134
Query 115 VLLGLLVSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREV 174
+LGLL+SS H D DW+ IG+G WD GR+SWVRLDR+L+V E IRR+G ++ R
Sbjct 135 TILGLLISSNPEHRGDDDWIDIGAGGWDTRGRQSWVRLDRILEVSELGIRRQGVVIPRGR 194
Query 175 FDVVAARLRADYAW 188
F+ +A RLR +++W
Sbjct 195 FERIANRLRNEFSW 208
>gi|19553541|ref|NP_601543.1| hypothetical protein NCgl2260 [Corynebacterium glutamicum ATCC
13032]
gi|62391185|ref|YP_226587.1| hypothetical protein cg2572 [Corynebacterium glutamicum ATCC
13032]
gi|21325113|dbj|BAB99735.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032]
gi|41326525|emb|CAF21007.1| conserved hypothetical protein [Corynebacterium glutamicum ATCC
13032]
Length=203
Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/183 (41%), Positives = 109/183 (60%), Gaps = 4/183 (2%)
Query 9 VFTEAPKLVRHLQNTQ--ETLRTIRQAVKITAN-IMTTAVPSPPAEIAAGRPVTSTSCPT 65
+F A + + H + Q +L IR+ + + + + PS + +P S PT
Sbjct 21 LFRRALRFLTHPPHKQVDNSLADIREGLGLGVDDSHEGSKPSNDHSLLHEKPEISV-MPT 79
Query 66 AARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLLVSSQE 125
+ AR + YAPD+DG+ DPGE+VW W + + R ++VVGR+R+ +LGLL+S
Sbjct 80 ESMARLIFYAPDMDGQTDPGEVVWIWAPADGPQQPPRKRAIVVVGRNRNAILGLLISCNP 139
Query 126 RHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAARLRAD 185
H D DW+ IGSG+WD GR+SWVRLDRVL+VPE IRR+G ++ F+ +A RLR D
Sbjct 140 EHRTDEDWIDIGSGSWDPRGRQSWVRLDRVLEVPELGIRRQGTVVPPGRFERIANRLRND 199
Query 186 YAW 188
+ W
Sbjct 200 FNW 202
>gi|145296310|ref|YP_001139131.1| hypothetical protein cgR_2225 [Corynebacterium glutamicum R]
gi|140846230|dbj|BAF55229.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344044650|gb|EGV40326.1| hypothetical protein CgS9114_09086 [Corynebacterium glutamicum
S9114]
Length=203
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/183 (40%), Positives = 109/183 (60%), Gaps = 4/183 (2%)
Query 9 VFTEAPKLVRHLQNTQ--ETLRTIRQAVKITAN-IMTTAVPSPPAEIAAGRPVTSTSCPT 65
+F A + + H + Q +L IR+ + + + + PS + +P S PT
Sbjct 21 LFRRALRFLTHPPHKQVDNSLADIREGLGLGVDDSHEGSKPSNDHSLLHEKPEISV-MPT 79
Query 66 AARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLLVSSQE 125
+ AR + YAPD+DG+ DPGE+VW W + + R ++VVGR+R+ +LGLL+S
Sbjct 80 ESMARLIFYAPDMDGQTDPGEVVWIWAPADGPQQPPRKRAIVVVGRNRNAILGLLISCNP 139
Query 126 RHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAARLRAD 185
H D DW+ IGSG+WD GR+SWVRLDRVL+V E IRR+G ++ + F+ +A RLR D
Sbjct 140 EHRTDEDWIDIGSGSWDPRGRQSWVRLDRVLEVHELGIRRQGTVIPQGRFERIANRLRND 199
Query 186 YAW 188
+ W
Sbjct 200 FNW 202
>gi|297562312|ref|YP_003681286.1| hypothetical protein Ndas_3375 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296846760|gb|ADH68780.1| conserved hypothetical protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length=148
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/127 (59%), Positives = 94/127 (75%), Gaps = 1/127 (0%)
Query 63 CPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLLVS 122
PTAA A RLVYAP+ DG AD GEIVWTWV YE+DP RGKDRP+LVVGR L GL++S
Sbjct 21 IPTAASATRLVYAPERDGLADAGEIVWTWVPYEEDPGRGKDRPLLVVGRRGGRLHGLMLS 80
Query 123 SQERHAADR-DWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAAR 181
S+ A +R DW+ +GSG WD E R+S+VR+DR+ + E+ IRRE A+++ E+F +VA
Sbjct 81 SRRPDAWERQDWLPVGSGPWDREQRDSYVRVDRLFEFDEDDIRREAAVMDEELFWMVADV 140
Query 182 LRADYAW 188
LRA Y W
Sbjct 141 LRARYGW 147
>gi|25028799|ref|NP_738853.1| hypothetical protein CE2243 [Corynebacterium efficiens YS-314]
gi|23494085|dbj|BAC19053.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length=173
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/170 (43%), Positives = 102/170 (60%), Gaps = 6/170 (3%)
Query 25 ETLRTIRQAVKITANIMTTAVPSPP------AEIAAGRPVTSTSCPTAARARRLVYAPDL 78
E+L IR + I N +A P AA PT + AR L YAPD+
Sbjct 3 ESLAIIRDGLGIEENRDHSADPDQNKLSTMIGPQAAPVQTEINVLPTESMARALFYAPDM 62
Query 79 DGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLLVSSQERHAADRDWVGIGS 138
DG+ADPGE+VW W + + ++R ++VVGR R+ +LGLL+SS H D DW+ IG+
Sbjct 63 DGQADPGEVVWIWAPSDGPGSPPRERAMVVVGRTRNTILGLLISSNPEHRGDDDWIDIGA 122
Query 139 GAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAARLRADYAW 188
G WD GR+SWVRLDR+L+V E IRR+G ++ R F+ +A RLR +++W
Sbjct 123 GGWDTRGRQSWVRLDRILEVSELGIRRQGVVIPRGRFERIANRLRNEFSW 172
>gi|237785923|ref|YP_002906628.1| hypothetical protein ckrop_1343 [Corynebacterium kroppenstedtii
DSM 44385]
gi|237758835|gb|ACR18085.1| hypothetical protein ckrop_1343 [Corynebacterium kroppenstedtii
DSM 44385]
Length=233
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 58/126 (47%), Positives = 90/126 (72%), Gaps = 2/126 (1%)
Query 64 PTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLLVSS 123
PT A A L+YAPD+DG+ADPGE+VW +Q + G++R ++++G + GLL+S+
Sbjct 110 PTGACASTLIYAPDMDGQADPGEVVWVHSPNKQ--SDGRERAIVILGHHERYIRGLLIST 167
Query 124 QERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAARLR 183
+ H+ D +W+ IG+G WD +GR +WVRLD++++VP+ IRR+G +L R F+ +A+RLR
Sbjct 168 NDEHSTDNNWLEIGAGGWDMQGRPAWVRLDKIIEVPDHMIRRKGTVLPRRRFERIASRLR 227
Query 184 ADYAWR 189
DY WR
Sbjct 228 TDYNWR 233
>gi|220912732|ref|YP_002488041.1| hypothetical protein Achl_1978 [Arthrobacter chlorophenolicus
A6]
gi|219859610|gb|ACL39952.1| conserved hypothetical protein [Arthrobacter chlorophenolicus
A6]
Length=187
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/118 (57%), Positives = 87/118 (74%), Gaps = 3/118 (2%)
Query 74 YAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLLVSSQERHAADR-- 131
YAP DG DPGE+VWTWV YE+D +RGKDRPVL+VGR+ LLGL+++S++R AD
Sbjct 69 YAPQPDGEPDPGEVVWTWVPYEEDHSRGKDRPVLIVGRNGKYLLGLMLTSRDRVPADSAS 128
Query 132 -DWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAARLRADYAW 188
D+V +G+G WD +GR S +LDRVL + +SIRREGA+L+R FD VAA LR + W
Sbjct 129 GDYVDVGAGGWDRKGRPSEAKLDRVLQIRPDSIRREGAVLDRARFDAVAAGLRKRHGW 186
>gi|72160769|ref|YP_288426.1| hypothetical protein Tfu_0365 [Thermobifida fusca YX]
gi|71914501|gb|AAZ54403.1| conserved hypothetical protein [Thermobifida fusca YX]
Length=150
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/145 (53%), Positives = 94/145 (65%), Gaps = 5/145 (3%)
Query 49 PAEIAAGRPVTSTSC----PTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDR 104
PAE AA P PT L YAP+ DG AD GEIVWTWV +E+DPT+GKDR
Sbjct 5 PAESAARPPHPHEGAIREVPTRGNPTVLTYAPEPDGLADAGEIVWTWVPFEEDPTQGKDR 64
Query 105 PVLVVGRDRSVLLGLLVSSQERHAAD-RDWVGIGSGAWDYEGRESWVRLDRVLDVPEESI 163
P+LVVGR +VL L++SSQE + DW+ +GSG WD GR S++RLDR+ ++ E I
Sbjct 65 PLLVVGRKGNVLHALMLSSQEPDPWEADDWLLLGSGPWDRAGRVSYIRLDRLFELEEHEI 124
Query 164 RREGAILEREVFDVVAARLRADYAW 188
RREGAI++R F VAA LR Y W
Sbjct 125 RREGAIVDRATFWRVAAVLRDRYGW 149
>gi|213966185|ref|ZP_03394371.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
gi|213951200|gb|EEB62596.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
Length=204
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/133 (47%), Positives = 92/133 (70%), Gaps = 0/133 (0%)
Query 56 RPVTSTSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSV 115
R + + PTA AR +VY+PD+DG+ADPGE+VW + E + ++R V+VVGR
Sbjct 71 RDSVTIARPTAELARTIVYSPDMDGQADPGEVVWIPLQLEGENAALRERAVVVVGRHDQY 130
Query 116 LLGLLVSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVF 175
LLG+L+S++ H+ +W+ IGSG W+ + + SWVR+DR+L +PE IRR GA++ R F
Sbjct 131 LLGMLISTRSEHSEQPEWLFIGSGFWNEDPKPSWVRMDRILLIPESGIRRAGAMMPRRRF 190
Query 176 DVVAARLRADYAW 188
+++AARLR DY W
Sbjct 191 ELIAARLRGDYGW 203
>gi|269794651|ref|YP_003314106.1| hypothetical protein Sked_13320 [Sanguibacter keddieii DSM 10542]
gi|269096836|gb|ACZ21272.1| hypothetical protein Sked_13320 [Sanguibacter keddieii DSM 10542]
Length=193
Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/119 (58%), Positives = 88/119 (74%), Gaps = 7/119 (5%)
Query 71 RLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRSVLLGLLVSSQE--RHA 128
R Y+PDLDG+ DPGE+VWTWV YE+D RGKDRPVL+VGRD LLGL+++S++ R A
Sbjct 73 RAEYSPDLDGKPDPGEVVWTWVPYEEDHARGKDRPVLLVGRDGPWLLGLMLTSKDHGRDA 132
Query 129 ADRD-----WVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREVFDVVAARL 182
A D W+ IG+G WD+EGR S VRLDRV+ V ++RREGAI+ RE+F V +RL
Sbjct 133 AAEDRHGRRWMDIGAGTWDHEGRPSEVRLDRVVRVDPAAVRREGAIVSRELFASVVSRL 191
>gi|345003688|ref|YP_004806542.1| hypothetical protein SACTE_6227 [Streptomyces sp. SirexAA-E]
gi|344319314|gb|AEN14002.1| conserved hypothetical protein [Streptomyces sp. SirexAA-E]
Length=154
Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/134 (51%), Positives = 86/134 (65%), Gaps = 0/134 (0%)
Query 55 GRPVTSTSCPTAARARRLVYAPDLDGRADPGEIVWTWVAYEQDPTRGKDRPVLVVGRDRS 114
GR T+ + P R YAPD DG DPGEIVWTWV +E++ RGKDRPVLVV R+ +
Sbjct 20 GRGATTQADPLDVGPVRTSYAPDRDGDPDPGEIVWTWVPFEENDGRGKDRPVLVVAREAT 79
Query 115 VLLGLLVSSQERHAADRDWVGIGSGAWDYEGRESWVRLDRVLDVPEESIRREGAILEREV 174
+ + S +RH + +WV +G+G WD GR SWV LDRVL V E+ +RRE L+R
Sbjct 80 GTVLAVQLSSKRHDEEHEWVSLGAGPWDSSGRPSWVDLDRVLRVHEDGMRREACALDRGR 139
Query 175 FDVVAARLRADYAW 188
FD+VA RLR Y W
Sbjct 140 FDLVAGRLRERYGW 153
Lambda K H
0.319 0.134 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 187037746340
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40