BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2407
Length=273
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609544|ref|NP_216923.1| ribonuclease Z [Mycobacterium tuber... 544 4e-153
gi|31793586|ref|NP_856079.1| ribonuclease Z [Mycobacterium bovis... 518 3e-145
gi|289575101|ref|ZP_06455328.1| ribonuclease Z [Mycobacterium tu... 517 9e-145
gi|121638288|ref|YP_978512.1| ribonuclease Z [Mycobacterium bovi... 516 2e-144
gi|340627418|ref|YP_004745870.1| hypothetical protein MCAN_24411... 515 3e-144
gi|240169957|ref|ZP_04748616.1| ribonuclease Z [Mycobacterium ka... 444 7e-123
gi|183983707|ref|YP_001851998.1| metal-dependent hydrolase [Myco... 441 6e-122
gi|161350067|ref|NP_336961.2| ribonuclease Z [Mycobacterium tube... 441 7e-122
gi|118618938|ref|YP_907270.1| ribonuclease Z [Mycobacterium ulce... 440 1e-121
gi|13882195|gb|AAK46775.1| arylsulfatase, putative [Mycobacteriu... 430 9e-119
gi|254818757|ref|ZP_05223758.1| ribonuclease Z [Mycobacterium in... 416 2e-114
gi|342857805|ref|ZP_08714461.1| ribonuclease Z [Mycobacterium co... 408 4e-112
gi|41408318|ref|NP_961154.1| ribonuclease Z [Mycobacterium avium... 404 6e-111
gi|333990144|ref|YP_004522758.1| metal-dependent hydrolase [Myco... 401 5e-110
gi|296170536|ref|ZP_06852120.1| ribonuclease Z [Mycobacterium pa... 399 2e-109
gi|120404862|ref|YP_954691.1| ribonuclease Z [Mycobacterium vanb... 395 3e-108
gi|145223256|ref|YP_001133934.1| ribonuclease Z [Mycobacterium g... 392 3e-107
gi|118468499|ref|YP_888836.1| ribonuclease Z [Mycobacterium smeg... 390 1e-106
gi|118466889|ref|YP_880999.1| ribonuclease Z [Mycobacterium aviu... 380 9e-104
gi|108800472|ref|YP_640669.1| ribonuclease Z [Mycobacterium sp. ... 362 3e-98
gi|41017532|sp|Q49744.2|RNZ_MYCLE RecName: Full=Putative ribonuc... 194 1e-47
gi|466962|gb|AAA17148.1| B1937_C1_163 [Mycobacterium leprae] 182 6e-44
gi|197105711|ref|YP_002131088.1| metallo-beta-lactamase family p... 157 2e-36
gi|220916746|ref|YP_002492050.1| Ribonuclease Z [Anaeromyxobacte... 148 8e-34
gi|167646632|ref|YP_001684295.1| ribonuclease Z [Caulobacter sp.... 148 1e-33
gi|163792586|ref|ZP_02186563.1| ribonuclease Z [alpha proteobact... 147 1e-33
gi|197121970|ref|YP_002133921.1| ribonuclease Z [Anaeromyxobacte... 146 3e-33
gi|149927436|ref|ZP_01915691.1| ribonuclease Z [Limnobacter sp. ... 145 7e-33
gi|85708124|ref|ZP_01039190.1| metallo-beta-lactamase family pro... 143 3e-32
gi|254514783|ref|ZP_05126844.1| ribonuclease Z [gamma proteobact... 142 4e-32
gi|340788141|ref|YP_004753606.1| hydrolase [Collimonas fungivora... 139 4e-31
gi|154251904|ref|YP_001412728.1| ribonuclease Z [Parvibaculum la... 136 3e-30
gi|254490530|ref|ZP_05103716.1| metallo-beta-lactamase superfami... 135 6e-30
gi|241663940|ref|YP_002982300.1| beta-lactamase domain-containin... 134 1e-29
gi|16125428|ref|NP_419992.1| ribonuclease Z [Caulobacter crescen... 134 1e-29
gi|221234171|ref|YP_002516607.1| ribonuclease Z [Caulobacter cre... 134 2e-29
gi|187929827|ref|YP_001900314.1| beta-lactamase domain-containin... 133 2e-29
gi|309781470|ref|ZP_07676206.1| hydrolase [Ralstonia sp. 5_7_47F... 133 2e-29
gi|114799524|ref|YP_760010.1| ribonuclease Z [Hyphomonas neptuni... 130 2e-28
gi|119474698|ref|ZP_01615051.1| ribonuclease Z [marine gamma pro... 129 4e-28
gi|299065910|emb|CBJ37090.1| putative arylsulfatase (Aryl-sulfat... 128 1e-27
gi|334195076|gb|AEG68261.1| arylsulfatase precursor (aryl-sulfat... 127 1e-27
gi|117618007|ref|YP_855738.1| ribonuclease Z, putative [Aeromona... 127 2e-27
gi|206590350|emb|CAQ37311.1| arylsulfatase precursor (aryl-sulfa... 127 2e-27
gi|83749087|ref|ZP_00946093.1| Metal-dependent hydrolase [Ralsto... 127 2e-27
gi|300703243|ref|YP_003744845.1| arylsulfatase [Ralstonia solana... 127 2e-27
gi|17547214|ref|NP_520616.1| hydrolase [Ralstonia solanacearum G... 125 5e-27
gi|300690635|ref|YP_003751630.1| arylsulfatase (aryl-sulfate sul... 125 6e-27
gi|344167403|emb|CCA79626.1| putative arylsulfatase (Aryl-sulfat... 125 6e-27
gi|330830709|ref|YP_004393661.1| ribonuclease Z [Aeromonas veron... 125 9e-27
>gi|15609544|ref|NP_216923.1| ribonuclease Z [Mycobacterium tuberculosis H37Rv]
gi|148662240|ref|YP_001283763.1| ribonuclease Z [Mycobacterium tuberculosis H37Ra]
gi|167966868|ref|ZP_02549145.1| ribonuclease Z [Mycobacterium tuberculosis H37Ra]
12 more sequence titles
Length=273
Score = 544 bits (1402), Expect = 4e-153, Method: Compositional matrix adjust.
Identities = 273/273 (100%), Positives = 273/273 (100%), Gaps = 0/273 (0%)
Query 1 MLEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLT 60
MLEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLT
Sbjct 1 MLEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLT 60
Query 61 HLHGDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHADLTTPPP 120
HLHGDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHADLTTPPP
Sbjct 61 HLHGDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHADLTTPPP 120
Query 121 IEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPCDSLDQLA 180
IEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPCDSLDQLA
Sbjct 121 IEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPCDSLDQLA 180
Query 181 AGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTLVMTHYVPAIGP 240
AGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTLVMTHYVPAIGP
Sbjct 181 AGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTLVMTHYVPAIGP 240
Query 241 GQEEQWRALAATEFSGRIEVGNDLHRVEVHPRR 273
GQEEQWRALAATEFSGRIEVGNDLHRVEVHPRR
Sbjct 241 GQEEQWRALAATEFSGRIEVGNDLHRVEVHPRR 273
>gi|31793586|ref|NP_856079.1| ribonuclease Z [Mycobacterium bovis AF2122/97]
gi|148823610|ref|YP_001288364.1| ribonuclease Z [Mycobacterium tuberculosis F11]
gi|253798515|ref|YP_003031516.1| hypothetical protein TBMG_01567 [Mycobacterium tuberculosis KZN
1435]
54 more sequence titles
Length=280
Score = 518 bits (1335), Expect = 3e-145, Method: Compositional matrix adjust.
Identities = 273/280 (98%), Positives = 273/280 (98%), Gaps = 7/280 (2%)
Query 1 MLEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLT 60
MLEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLT
Sbjct 1 MLEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLT 60
Query 61 HLH-------GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHA 113
HLH GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHA
Sbjct 61 HLHSDHIAELGDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHA 120
Query 114 DLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC 173
DLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC
Sbjct 121 DLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC 180
Query 174 DSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTLVMTH 233
DSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTLVMTH
Sbjct 181 DSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTLVMTH 240
Query 234 YVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEVHPRR 273
YVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEVHPRR
Sbjct 241 YVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEVHPRR 280
>gi|289575101|ref|ZP_06455328.1| ribonuclease Z [Mycobacterium tuberculosis K85]
gi|339632434|ref|YP_004724076.1| hypothetical protein MAF_24220 [Mycobacterium africanum GM041182]
gi|289539532|gb|EFD44110.1| ribonuclease Z [Mycobacterium tuberculosis K85]
gi|339331790|emb|CCC27492.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
Length=280
Score = 517 bits (1331), Expect = 9e-145, Method: Compositional matrix adjust.
Identities = 272/280 (98%), Positives = 272/280 (98%), Gaps = 7/280 (2%)
Query 1 MLEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLT 60
MLEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLT
Sbjct 1 MLEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLT 60
Query 61 HLH-------GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHA 113
HLH GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHA
Sbjct 61 HLHSDHIAELGDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHA 120
Query 114 DLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC 173
DLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPV PTIGFRIESDGASVVLAGDTVPC
Sbjct 121 DLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVKPTIGFRIESDGASVVLAGDTVPC 180
Query 174 DSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTLVMTH 233
DSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTLVMTH
Sbjct 181 DSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTLVMTH 240
Query 234 YVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEVHPRR 273
YVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEVHPRR
Sbjct 241 YVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEVHPRR 280
>gi|121638288|ref|YP_978512.1| ribonuclease Z [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224990782|ref|YP_002645469.1| ribonuclease Z [Mycobacterium bovis BCG str. Tokyo 172]
gi|166991488|sp|A1KL99.1|RNZ_MYCBP RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA
3 endonuclease; AltName: Full=tRNase Z
gi|254808649|sp|C1AQX2.1|RNZ_MYCBT RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA
3 endonuclease; AltName: Full=tRNase Z
gi|121493936|emb|CAL72411.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224773895|dbj|BAH26701.1| ribonuclease Z [Mycobacterium bovis BCG str. Tokyo 172]
gi|341602326|emb|CCC65000.1| conserved hypothetical protein [Mycobacterium bovis BCG str.
Moreau RDJ]
Length=280
Score = 516 bits (1329), Expect = 2e-144, Method: Compositional matrix adjust.
Identities = 272/280 (98%), Positives = 273/280 (98%), Gaps = 7/280 (2%)
Query 1 MLEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLT 60
MLEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLT
Sbjct 1 MLEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLT 60
Query 61 HLH-------GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHA 113
HLH GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHA
Sbjct 61 HLHSDHIAELGDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHA 120
Query 114 DLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC 173
DLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC
Sbjct 121 DLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC 180
Query 174 DSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTLVMTH 233
DSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSV+EAAATANRAGVGTLVMTH
Sbjct 181 DSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVREAAATANRAGVGTLVMTH 240
Query 234 YVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEVHPRR 273
YVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEVHPRR
Sbjct 241 YVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEVHPRR 280
>gi|340627418|ref|YP_004745870.1| hypothetical protein MCAN_24411 [Mycobacterium canettii CIPT
140010059]
gi|340005608|emb|CCC44772.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=280
Score = 515 bits (1326), Expect = 3e-144, Method: Compositional matrix adjust.
Identities = 271/280 (97%), Positives = 271/280 (97%), Gaps = 7/280 (2%)
Query 1 MLEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLT 60
MLEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLT
Sbjct 1 MLEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLT 60
Query 61 HLH-------GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHA 113
HLH GDVLITSWVTNFA DPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHA
Sbjct 61 HLHSDHIAELGDVLITSWVTNFATDPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHA 120
Query 114 DLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC 173
DLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC
Sbjct 121 DLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC 180
Query 174 DSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTLVMTH 233
DSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANR GVGTLVMTH
Sbjct 181 DSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRVGVGTLVMTH 240
Query 234 YVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEVHPRR 273
YVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEVHPRR
Sbjct 241 YVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEVHPRR 280
>gi|240169957|ref|ZP_04748616.1| ribonuclease Z [Mycobacterium kansasii ATCC 12478]
Length=280
Score = 444 bits (1142), Expect = 7e-123, Method: Compositional matrix adjust.
Identities = 232/280 (83%), Positives = 250/280 (90%), Gaps = 7/280 (2%)
Query 1 MLEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLT 60
M+EITLLGTGSPIPDP+RAGP+TLVRA Q FL+DCGRGVLQRAAAVGVGAAGLSA+L+T
Sbjct 1 MIEITLLGTGSPIPDPNRAGPATLVRADGQVFLIDCGRGVLQRAAAVGVGAAGLSALLIT 60
Query 61 HLH-------GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHA 113
HLH GDV+IT+WVTNFA PL IIGPPGTAEVV ATL+AFGHDIGYRIAHHA
Sbjct 61 HLHSDHIAELGDVIITNWVTNFAPAAPPLQIIGPPGTAEVVAATLRAFGHDIGYRIAHHA 120
Query 114 DLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC 173
DL PPP+EVHEYT G WDR+GVTIRVAPTDHRPV PTIGFRIES G SVVLAGDTVPC
Sbjct 121 DLDAPPPVEVHEYTEGTVWDREGVTIRVAPTDHRPVAPTIGFRIESGGVSVVLAGDTVPC 180
Query 174 DSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTLVMTH 233
SLD+LAAGADALVHTVIRKDI+ +PQQRVKD+CDYHSSVQEAAATANRAGVGTLVMTH
Sbjct 181 ASLDELAAGADALVHTVIRKDILAHVPQQRVKDVCDYHSSVQEAAATANRAGVGTLVMTH 240
Query 234 YVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEVHPRR 273
YVPAI GQE+QWRALAATEFSG IE+G+DLHRVEVHPRR
Sbjct 241 YVPAIIAGQEDQWRALAATEFSGTIELGDDLHRVEVHPRR 280
>gi|183983707|ref|YP_001851998.1| metal-dependent hydrolase [Mycobacterium marinum M]
gi|254808650|sp|B2HMC3.1|RNZ_MYCMM RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA
3 endonuclease; AltName: Full=tRNase Z
gi|183177033|gb|ACC42143.1| metal-dependent hydrolase [Mycobacterium marinum M]
Length=279
Score = 441 bits (1134), Expect = 6e-122, Method: Compositional matrix adjust.
Identities = 240/279 (87%), Positives = 248/279 (89%), Gaps = 7/279 (2%)
Query 1 MLEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLT 60
M+EITLLGTGSPIPDPDRAGPSTLVRAG Q FLVDCGRGVLQRAAAVGVGAAGLSAVLLT
Sbjct 1 MIEITLLGTGSPIPDPDRAGPSTLVRAGGQVFLVDCGRGVLQRAAAVGVGAAGLSAVLLT 60
Query 61 HLH-------GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHA 113
HLH GDVLITSWVTNFAADPAPL +IGPPGTAE V+A LKAFG DIGYRIAHHA
Sbjct 61 HLHSDHIAELGDVLITSWVTNFAADPAPLQVIGPPGTAETVDAMLKAFGRDIGYRIAHHA 120
Query 114 DLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC 173
DL PPPIEVHEYT G WDRDGV IRVAPTDHRPV PTIGFR+E DGAS VLAGDTVPC
Sbjct 121 DLNAPPPIEVHEYTDGTVWDRDGVAIRVAPTDHRPVAPTIGFRVEFDGASAVLAGDTVPC 180
Query 174 DSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTLVMTH 233
SLD+LAAGA ALVHTVIRKDI+T PQQRVKDICDYHSSVQEAAATA RAGVGTLVMTH
Sbjct 181 PSLDELAAGAGALVHTVIRKDIITNFPQQRVKDICDYHSSVQEAAATAARAGVGTLVMTH 240
Query 234 YVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEVHPR 272
YVPAI GQE+QWRALAATEF GRIE+GNDLHRVEVH R
Sbjct 241 YVPAIIAGQEDQWRALAATEFGGRIELGNDLHRVEVHAR 279
>gi|161350067|ref|NP_336961.2| ribonuclease Z [Mycobacterium tuberculosis CDC1551]
gi|323719004|gb|EGB28153.1| hypothetical protein TMMG_01699 [Mycobacterium tuberculosis CDC1551A]
Length=241
Score = 441 bits (1133), Expect = 7e-122, Method: Compositional matrix adjust.
Identities = 233/241 (97%), Positives = 234/241 (98%), Gaps = 7/241 (2%)
Query 40 VLQRAAAVGVGAAGLSAVLLTHLH-------GDVLITSWVTNFAADPAPLPIIGPPGTAE 92
+LQRAAAVGVGAAGLSAVLLTHLH GDVLITSWVTNFAADPAPLPIIGPPGTAE
Sbjct 1 MLQRAAAVGVGAAGLSAVLLTHLHSDHIAELGDVLITSWVTNFAADPAPLPIIGPPGTAE 60
Query 93 VVEATLKAFGHDIGYRIAHHADLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPT 152
VVEATLKAFGHDIGYRIAHHADLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPT
Sbjct 61 VVEATLKAFGHDIGYRIAHHADLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPT 120
Query 153 IGFRIESDGASVVLAGDTVPCDSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHS 212
IGFRIESDGASVVLAGDTVPCDSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHS
Sbjct 121 IGFRIESDGASVVLAGDTVPCDSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHS 180
Query 213 SVQEAAATANRAGVGTLVMTHYVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEVHPR 272
SVQEAAATANRAGVGTLVMTHYVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEVHPR
Sbjct 181 SVQEAAATANRAGVGTLVMTHYVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEVHPR 240
Query 273 R 273
R
Sbjct 241 R 241
>gi|118618938|ref|YP_907270.1| ribonuclease Z [Mycobacterium ulcerans Agy99]
gi|166991492|sp|A0PTY0.1|RNZ_MYCUA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA
3 endonuclease; AltName: Full=tRNase Z
gi|118571048|gb|ABL05799.1| metal-dependent hydrolase [Mycobacterium ulcerans Agy99]
Length=279
Score = 440 bits (1131), Expect = 1e-121, Method: Compositional matrix adjust.
Identities = 240/279 (87%), Positives = 247/279 (89%), Gaps = 7/279 (2%)
Query 1 MLEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLT 60
M+EITLLGTGSPIPDPDRAGPSTLVRAG Q FLVDCGRGVLQRAAAVGVGAAGLSAVLLT
Sbjct 1 MIEITLLGTGSPIPDPDRAGPSTLVRAGGQVFLVDCGRGVLQRAAAVGVGAAGLSAVLLT 60
Query 61 HLH-------GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHA 113
HLH GDVLITSWVTNFAADPAPL +IGPPGTAE VEA LKAFG DIGYRIAHHA
Sbjct 61 HLHSDHIAELGDVLITSWVTNFAADPAPLQVIGPPGTAETVEAMLKAFGRDIGYRIAHHA 120
Query 114 DLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC 173
DL PPPIEVHEYT G WDRDGV IRVAPTDHRPV PTIGFR+E DGAS VLAG TVPC
Sbjct 121 DLNAPPPIEVHEYTDGTVWDRDGVAIRVAPTDHRPVAPTIGFRVEFDGASAVLAGGTVPC 180
Query 174 DSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTLVMTH 233
SLD+LAAGA ALVHTVIRKDI+T PQQRVKDICDYHSSVQEAAATA RAGVGTLVMTH
Sbjct 181 PSLDELAAGAGALVHTVIRKDIITNFPQQRVKDICDYHSSVQEAAATAARAGVGTLVMTH 240
Query 234 YVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEVHPR 272
YVPAI GQE+QWRALAATEF GRIE+GNDLHRVEVH R
Sbjct 241 YVPAIIAGQEDQWRALAATEFGGRIELGNDLHRVEVHAR 279
>gi|13882195|gb|AAK46775.1| arylsulfatase, putative [Mycobacterium tuberculosis CDC1551]
Length=224
Score = 430 bits (1106), Expect = 9e-119, Method: Compositional matrix adjust.
Identities = 216/224 (97%), Positives = 217/224 (97%), Gaps = 7/224 (3%)
Query 57 VLLTHLH-------GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRI 109
+LLTHLH GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRI
Sbjct 1 MLLTHLHSDHIAELGDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRI 60
Query 110 AHHADLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGD 169
AHHADLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGD
Sbjct 61 AHHADLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGD 120
Query 170 TVPCDSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTL 229
TVPCDSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTL
Sbjct 121 TVPCDSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTL 180
Query 230 VMTHYVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEVHPRR 273
VMTHYVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEVHPRR
Sbjct 181 VMTHYVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEVHPRR 224
>gi|254818757|ref|ZP_05223758.1| ribonuclease Z [Mycobacterium intracellulare ATCC 13950]
Length=280
Score = 416 bits (1070), Expect = 2e-114, Method: Compositional matrix adjust.
Identities = 225/276 (82%), Positives = 242/276 (88%), Gaps = 7/276 (2%)
Query 1 MLEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLT 60
M+E+TLLGTGSPIPDP+RAGPSTLVRAG Q FL DCGRGVLQRAAAVGVGAAGLSA+LLT
Sbjct 1 MIEVTLLGTGSPIPDPNRAGPSTLVRAGGQVFLADCGRGVLQRAAAVGVGAAGLSALLLT 60
Query 61 HLH-------GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHA 113
HLH GDVLIT W++ F DPAPLPIIGPPGTAE+VEATLKAF HDIGYRIAHHA
Sbjct 61 HLHSDHVGDLGDVLITRWISTFTPDPAPLPIIGPPGTAELVEATLKAFHHDIGYRIAHHA 120
Query 114 DLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC 173
DL PP +EVHEYT GP WDRDGV+IRV TDHRPV PTIGFRIE +GASVVLAGDTVPC
Sbjct 121 DLNAPPAVEVHEYTDGPVWDRDGVSIRVGATDHRPVAPTIGFRIEYEGASVVLAGDTVPC 180
Query 174 DSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTLVMTH 233
SLD+LAAGA ALVHTVIRKDIV IPQQR+ DICDYHSSV+EAAATA RAGVGTLVMTH
Sbjct 181 ASLDELAAGAGALVHTVIRKDIVAAIPQQRLVDICDYHSSVEEAAATAARAGVGTLVMTH 240
Query 234 YVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEV 269
YVPA+ PGQEEQWRALAA +F GRIE+G DLHRV+V
Sbjct 241 YVPALVPGQEEQWRALAAEQFGGRIELGYDLHRVQV 276
>gi|342857805|ref|ZP_08714461.1| ribonuclease Z [Mycobacterium colombiense CECT 3035]
gi|342135138|gb|EGT88304.1| ribonuclease Z [Mycobacterium colombiense CECT 3035]
Length=280
Score = 408 bits (1049), Expect = 4e-112, Method: Compositional matrix adjust.
Identities = 219/276 (80%), Positives = 240/276 (87%), Gaps = 7/276 (2%)
Query 1 MLEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLT 60
M+E+TLLGTGSPIPDP+RAGPSTLV+AG Q FLVDCGRGVLQRAA+VGVGAAGL+A+LLT
Sbjct 1 MIEVTLLGTGSPIPDPNRAGPSTLVQAGGQVFLVDCGRGVLQRAASVGVGAAGLTALLLT 60
Query 61 HLH-------GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHA 113
HLH GDVLIT W++ F DPAPLPIIGPPGTAE V ATL AF HDIGYRIAHH+
Sbjct 61 HLHSDHIGDLGDVLITRWISTFTPDPAPLPIIGPPGTAEAVAATLNAFRHDIGYRIAHHS 120
Query 114 DLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC 173
DL PP ++VHEYT G WDRDGV IRVAPTDHRPV PTIGFRIE GAS VLAGDTVPC
Sbjct 121 DLNEPPAVDVHEYTEGAVWDRDGVAIRVAPTDHRPVAPTIGFRIEYQGASAVLAGDTVPC 180
Query 174 DSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTLVMTH 233
LD+LAAGA ALVHTVIRKDIV IPQQR++DICDYHSSV+EAAATA RAGVGTLVMTH
Sbjct 181 AGLDELAAGAGALVHTVIRKDIVVNIPQQRLQDICDYHSSVEEAAATAARAGVGTLVMTH 240
Query 234 YVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEV 269
YVPA+ PGQEEQWRALAAT+F GRIE+G+DLHRV+V
Sbjct 241 YVPALVPGQEEQWRALAATQFGGRIELGDDLHRVQV 276
>gi|41408318|ref|NP_961154.1| ribonuclease Z [Mycobacterium avium subsp. paratuberculosis K-10]
gi|56749440|sp|Q73XT9.1|RNZ_MYCPA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA
3 endonuclease; AltName: Full=tRNase Z
gi|41396674|gb|AAS04537.1| hypothetical protein MAP_2220 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336458246|gb|EGO37227.1| metal-dependent hydrolase, beta-lactamase superfamily III [Mycobacterium
avium subsp. paratuberculosis S397]
Length=280
Score = 404 bits (1039), Expect = 6e-111, Method: Compositional matrix adjust.
Identities = 217/276 (79%), Positives = 239/276 (87%), Gaps = 7/276 (2%)
Query 1 MLEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLT 60
M+E+TLLGTGSPIPDP+RAGPSTLVRAG Q FLVDCGRGVLQRAAA GVGAAGLSA+LLT
Sbjct 1 MIEVTLLGTGSPIPDPNRAGPSTLVRAGGQVFLVDCGRGVLQRAAAGGVGAAGLSALLLT 60
Query 61 HLH-------GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHA 113
HLH GDVLIT W++ F DP PLPIIGPPGTAE+V ATL A HDIGYRIAHHA
Sbjct 61 HLHSDHVGDLGDVLITRWISTFTPDPVPLPIIGPPGTAELVAATLNALRHDIGYRIAHHA 120
Query 114 DLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC 173
DL PP ++V E+T GP WDRDGV+IRVAPTDHRPV PTIGFR+E GASVVLAGDTVPC
Sbjct 121 DLNAPPAVDVREHTDGPVWDRDGVSIRVAPTDHRPVAPTIGFRVEYQGASVVLAGDTVPC 180
Query 174 DSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTLVMTH 233
LD+LAAGA ALVHTVIRKDIV IPQQR++DICDYHSSV+EAAATA RAGVGTLVMTH
Sbjct 181 AGLDELAAGAGALVHTVIRKDIVATIPQQRLQDICDYHSSVEEAAATAARAGVGTLVMTH 240
Query 234 YVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEV 269
YVPA+ GQEEQWRALAA EF+GR+E+G+DLHRV+V
Sbjct 241 YVPALVAGQEEQWRALAAREFAGRVELGDDLHRVQV 276
>gi|333990144|ref|YP_004522758.1| metal-dependent hydrolase [Mycobacterium sp. JDM601]
gi|333486112|gb|AEF35504.1| metal-dependent hydrolase [Mycobacterium sp. JDM601]
Length=285
Score = 401 bits (1031), Expect = 5e-110, Method: Compositional matrix adjust.
Identities = 211/282 (75%), Positives = 235/282 (84%), Gaps = 11/282 (3%)
Query 2 LEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLT- 60
+EITLLGTGSPIPDP+RAGPSTL+RAG QA LVDCGRGVLQR AA G A L+A+LLT
Sbjct 3 IEITLLGTGSPIPDPNRAGPSTLIRAGGQALLVDCGRGVLQRLAAAGASANTLAALLLTH 62
Query 61 ----HLH--GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHAD 114
H+ GD+LIT WVT F DPAPLPIIGPPGTA+VV A L+AFGHDIGYRIAHH D
Sbjct 63 LHSDHIADLGDLLITRWVTTFTPDPAPLPIIGPPGTADVVAAMLRAFGHDIGYRIAHHDD 122
Query 115 LTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIE----SDGASVVLAGDT 170
LT PPP++V E+TAG WDRDGV I VAPTDHRPVTPTIGFRIE S ASVV+AGDT
Sbjct 123 LTAPPPVDVQEHTAGQVWDRDGVRITVAPTDHRPVTPTIGFRIEHTDASGTASVVMAGDT 182
Query 171 VPCDSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTLV 230
VPCDSLD+LAAGADALVHTVIR D++ +PQQR++DICDYHSSV +A ATA RAGVGTLV
Sbjct 183 VPCDSLDELAAGADALVHTVIRSDLIAALPQQRIRDICDYHSSVAQAGATARRAGVGTLV 242
Query 231 MTHYVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEVHPR 272
+THYVPAI PGQEEQWRALAA EF G IE+G+DLHRV+V R
Sbjct 243 LTHYVPAIAPGQEEQWRALAAAEFDGPIELGDDLHRVDVVAR 284
>gi|296170536|ref|ZP_06852120.1| ribonuclease Z [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295894768|gb|EFG74493.1| ribonuclease Z [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=279
Score = 399 bits (1026), Expect = 2e-109, Method: Compositional matrix adjust.
Identities = 218/276 (79%), Positives = 240/276 (87%), Gaps = 7/276 (2%)
Query 1 MLEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLT 60
M+EITLLGTGSPIPDP+RAGPSTLVRAG Q FLVDCGRGVLQRAAAVGVGAAGL+A+L+T
Sbjct 1 MIEITLLGTGSPIPDPNRAGPSTLVRAGGQVFLVDCGRGVLQRAAAVGVGAAGLTALLIT 60
Query 61 HLH-------GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHA 113
HLH GD+LIT W++ FA DPAPLPIIGPPG AE VEATL+AF HDI YRIAHHA
Sbjct 61 HLHSDHIGDLGDLLITRWISTFAPDPAPLPIIGPPGIAETVEATLQAFRHDIEYRIAHHA 120
Query 114 DLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC 173
DL PP +EVHE T G WDRDGV+IRVAPTDHRPVTPT+GFRI+ ASVVLAGDTVPC
Sbjct 121 DLNAPPAVEVHECTEGAVWDRDGVSIRVAPTDHRPVTPTVGFRIDHGTASVVLAGDTVPC 180
Query 174 DSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTLVMTH 233
LD+LAAGA ALVHTVIRKDIV IPQQR++DICDYHSSV+EAAATA RAGVGTLVMTH
Sbjct 181 PGLDRLAAGAGALVHTVIRKDIVGNIPQQRLQDICDYHSSVEEAAATAARAGVGTLVMTH 240
Query 234 YVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEV 269
YVPA GQEEQWRALAA++F GRIE+G+DLHRVE+
Sbjct 241 YVPAPVAGQEEQWRALAASQFGGRIELGDDLHRVEI 276
>gi|120404862|ref|YP_954691.1| ribonuclease Z [Mycobacterium vanbaalenii PYR-1]
gi|119957680|gb|ABM14685.1| beta-lactamase domain protein [Mycobacterium vanbaalenii PYR-1]
Length=300
Score = 395 bits (1016), Expect = 3e-108, Method: Compositional matrix adjust.
Identities = 210/278 (76%), Positives = 234/278 (85%), Gaps = 7/278 (2%)
Query 1 MLEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLT 60
M+E+TLLGTGSPIPD RAGPSTLVRAG Q FLVDCGRGVLQR AAVGVGA ++A+LLT
Sbjct 15 MIEVTLLGTGSPIPDARRAGPSTLVRAGGQTFLVDCGRGVLQRLAAVGVGANNITALLLT 74
Query 61 HLH-------GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHA 113
HLH GDVLIT WV+NFA D APLPIIGPPGTAEVVE TLKAFG DIGYRIAHHA
Sbjct 75 HLHSDHIADLGDVLITRWVSNFAPDLAPLPIIGPPGTAEVVENTLKAFGFDIGYRIAHHA 134
Query 114 DLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC 173
DLTTPPP+EV E T G W RD V+IRV PTDHRPVTPTIGFRIE +GASVVLAGDTVPC
Sbjct 135 DLTTPPPVEVEEVTEGVVWGRDEVSIRVGPTDHRPVTPTIGFRIEHNGASVVLAGDTVPC 194
Query 174 DSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTLVMTH 233
LD+LAAGA ALVHTVIR D++ +P QR++DICDYHSSV++AA TA RAGVG L++TH
Sbjct 195 RGLDELAAGAGALVHTVIRPDLIEAMPVQRIRDICDYHSSVEQAADTATRAGVGILILTH 254
Query 234 YVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEVHP 271
YVP + PGQEE WRALAA+ F +IE+G+DLHRVEVHP
Sbjct 255 YVPTLQPGQEEDWRALAASVFDRQIEIGDDLHRVEVHP 292
>gi|145223256|ref|YP_001133934.1| ribonuclease Z [Mycobacterium gilvum PYR-GCK]
gi|315443716|ref|YP_004076595.1| metal-dependent hydrolase, beta-lactamase superfamily III [Mycobacterium
sp. Spyr1]
gi|189043787|sp|A4T2G4.1|RNZ_MYCGI RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA
3 endonuclease; AltName: Full=tRNase Z
gi|145215742|gb|ABP45146.1| beta-lactamase-like protein [Mycobacterium gilvum PYR-GCK]
gi|315262019|gb|ADT98760.1| metal-dependent hydrolase, beta-lactamase superfamily III [Mycobacterium
sp. Spyr1]
Length=286
Score = 392 bits (1008), Expect = 3e-107, Method: Compositional matrix adjust.
Identities = 207/278 (75%), Positives = 231/278 (84%), Gaps = 7/278 (2%)
Query 1 MLEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLT 60
M+E+TLLGTGSPIPD RAGPSTLVRAG Q FLVDCGRGVLQRAAAVGVGA +SA+LLT
Sbjct 1 MIEVTLLGTGSPIPDARRAGPSTLVRAGGQTFLVDCGRGVLQRAAAVGVGANQISALLLT 60
Query 61 HLH-------GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHA 113
HLH GDVLIT WV+NFA D PLPIIGPPGTAEVVE LKAF DIGYRIAHH
Sbjct 61 HLHSDHIADLGDVLITRWVSNFAPDLPPLPIIGPPGTAEVVENMLKAFSFDIGYRIAHHD 120
Query 114 DLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC 173
DLTTPPP+EV E T G W RD V+IRV PTDHRPVTPTIGFRIE GASVVLAGDTVPC
Sbjct 121 DLTTPPPVEVEEVTDGVVWGRDEVSIRVGPTDHRPVTPTIGFRIEHHGASVVLAGDTVPC 180
Query 174 DSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTLVMTH 233
LD+LAAGA ALVHTVIR+D++ +P QR++DICDYHSSV++AA TA RAGVG L++TH
Sbjct 181 RGLDKLAAGAGALVHTVIRRDLIEALPMQRIRDICDYHSSVEQAAETATRAGVGILILTH 240
Query 234 YVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEVHP 271
YVP + PGQE+ WRALAAT F +IE+G+DLHRV+VHP
Sbjct 241 YVPTLQPGQEDDWRALAATRFDRQIEIGDDLHRVQVHP 278
>gi|118468499|ref|YP_888836.1| ribonuclease Z [Mycobacterium smegmatis str. MC2 155]
gi|118169786|gb|ABK70682.1| ribonuclease Z [Mycobacterium smegmatis str. MC2 155]
Length=286
Score = 390 bits (1002), Expect = 1e-106, Method: Compositional matrix adjust.
Identities = 211/278 (76%), Positives = 232/278 (84%), Gaps = 7/278 (2%)
Query 1 MLEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLT 60
M+E+TLLGTGSPIPDPDRAGPST+VRAG Q FLVDCGRGVLQR AA G A+ LSA+LLT
Sbjct 1 MIEVTLLGTGSPIPDPDRAGPSTMVRAGGQTFLVDCGRGVLQRLAAAGSSASQLSALLLT 60
Query 61 HLH-------GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHA 113
HLH GDV+IT WV+ F D PLPIIGPPGTAEVVEATLKAFGHDIGYRIAHH
Sbjct 61 HLHSDHIADLGDVIITRWVSTFTPDAPPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHD 120
Query 114 DLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC 173
DLT PPP+EVHE+T G WDRDGV IRV PTDHRPVTPTI FR+E ASVV AGD+VPC
Sbjct 121 DLTAPPPVEVHEHTEGVVWDRDGVVIRVGPTDHRPVTPTIAFRVEHADASVVAAGDSVPC 180
Query 174 DSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTLVMTH 233
+LD LA GA AL+HTVIRKDI+ +PQQR++DICDYHSSVQEAAATA RAGVG L++TH
Sbjct 181 ATLDALATGAGALIHTVIRKDIIETLPQQRIRDICDYHSSVQEAAATAARAGVGILILTH 240
Query 234 YVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEVHP 271
YVPAI PG E+QWR LAATEF +IEVG DLHRVEVHP
Sbjct 241 YVPAIAPGTEDQWRELAATEFDRQIEVGADLHRVEVHP 278
>gi|118466889|ref|YP_880999.1| ribonuclease Z [Mycobacterium avium 104]
gi|254774593|ref|ZP_05216109.1| ribonuclease Z [Mycobacterium avium subsp. avium ATCC 25291]
gi|166991487|sp|A0QDL1.1|RNZ_MYCA1 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA
3 endonuclease; AltName: Full=tRNase Z
gi|118168176|gb|ABK69073.1| ribonuclease Z [Mycobacterium avium 104]
Length=280
Score = 380 bits (977), Expect = 9e-104, Method: Compositional matrix adjust.
Identities = 216/276 (79%), Positives = 239/276 (87%), Gaps = 7/276 (2%)
Query 1 MLEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLT 60
M+E+TLLGTGSPIPDP+RAGPSTLVRAG Q FLVDCGRGVLQRAAAVGVGAAGLS +LLT
Sbjct 1 MIEVTLLGTGSPIPDPNRAGPSTLVRAGGQVFLVDCGRGVLQRAAAVGVGAAGLSTLLLT 60
Query 61 HLH-------GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHA 113
HLH GDVLIT WV+ F DP PLPIIGPPGTAE+V ATL A HDIGYRIAHHA
Sbjct 61 HLHSDHVGDLGDVLITRWVSTFTPDPVPLPIIGPPGTAELVAATLNALRHDIGYRIAHHA 120
Query 114 DLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC 173
DL PP ++V E+T GP WDRDGV+IRVAPTDHRPV PTIGFR++ GASVVLAGDTVPC
Sbjct 121 DLNAPPAVDVREHTDGPVWDRDGVSIRVAPTDHRPVAPTIGFRVDYQGASVVLAGDTVPC 180
Query 174 DSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTLVMTH 233
LD+LAAGA ALVHTVIRKDIV IPQQR++DICDYHSSV++AAATA RAGVGTLVMTH
Sbjct 181 AGLDELAAGAGALVHTVIRKDIVATIPQQRLQDICDYHSSVEQAAATAARAGVGTLVMTH 240
Query 234 YVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEV 269
YVPA+ GQEEQWRALAA EF+GR+E+G+DLHRV+V
Sbjct 241 YVPALVAGQEEQWRALAAREFAGRVELGDDLHRVQV 276
>gi|108800472|ref|YP_640669.1| ribonuclease Z [Mycobacterium sp. MCS]
gi|119869610|ref|YP_939562.1| ribonuclease Z [Mycobacterium sp. KMS]
gi|126436095|ref|YP_001071786.1| ribonuclease Z [Mycobacterium sp. JLS]
6 more sequence titles
Length=285
Score = 362 bits (929), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 200/278 (72%), Positives = 221/278 (80%), Gaps = 8/278 (2%)
Query 1 MLEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLT 60
M+E+TLLGTGSP+PD RAGPSTLVRAG AFLVDCGRGV R AA G+ A GLSA+LLT
Sbjct 1 MIEVTLLGTGSPVPDARRAGPSTLVRAGGHAFLVDCGRGVQLRMAAAGIAANGLSALLLT 60
Query 61 HLH-------GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHA 113
HLH GD+LIT WVT F D PL IIGPPGTAE V A L AFG DIGYRIAHH
Sbjct 61 HLHSDHIADLGDLLITRWVTTFT-DQVPLQIIGPPGTAETVTAMLAAFGRDIGYRIAHHP 119
Query 114 DLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC 173
DLT PPP+EVHE T G AWD DGVT+RVAPTDHRPV PTIGFR+E ASVVLAGDTVPC
Sbjct 120 DLTAPPPVEVHEVTEGVAWDHDGVTVRVAPTDHRPVAPTIGFRVEHADASVVLAGDTVPC 179
Query 174 DSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTLVMTH 233
+LD LAAGA ALVHT IRKD+V PQQRV+++C+YHSSV+EAA TA RAGVG LV+TH
Sbjct 180 ATLDALAAGAGALVHTAIRKDLVELAPQQRVREVCEYHSSVEEAAETAERAGVGILVLTH 239
Query 234 YVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEVHP 271
Y+P I PGQE WRA AAT F +IE+G+DLHRVEVHP
Sbjct 240 YLPPIAPGQEADWRARAATAFPRQIELGDDLHRVEVHP 277
>gi|41017532|sp|Q49744.2|RNZ_MYCLE RecName: Full=Putative ribonuclease Z; Short=RNase Z; Short=tRNase
Z; AltName: Full=tRNA 3 endonuclease
gi|2398684|emb|CAB16144.1| hypothetical protein MLCL536.01 [Mycobacterium leprae]
Length=220
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/187 (62%), Positives = 128/187 (69%), Gaps = 10/187 (5%)
Query 25 VRAGAQAFLVDCGRGVLQRAAAVGVGA-AGLSAVLLTHLHGD-------VLITSWVTNFA 76
++AG Q FLVDC GVLQRA+A A THLHGD +LIT WVT FA
Sbjct 1 MQAGRQLFLVDCWLGVLQRASAGPTHTPAVCQRCCSTHLHGDRISDLGDLLITHWVTTFA 60
Query 77 ADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHADLTTPPPIEVHEYTAG-PAWDRD 135
DP PLPIIG P TAE VEA LKA GHDI Y+I HH L TPP IEV+EYT G D
Sbjct 61 LDPPPLPIIGSPDTAETVEAKLKASGHDIEYQITHHTYLNTPPLIEVYEYTKGFVGAPPD 120
Query 136 GVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPCDSLDQLAAGADALVHTVIRKDI 195
GV+IR T+H PVTPTIGFRIES SVVL G TVPC SLD+LAA ADALVHT+IRK+I
Sbjct 121 GVSIR-GSTNHGPVTPTIGFRIESGPTSVVLTGGTVPCASLDELAAEADALVHTIIRKNI 179
Query 196 VTQIPQQ 202
V ++ QQ
Sbjct 180 VIRVHQQ 186
>gi|466962|gb|AAA17148.1| B1937_C1_163 [Mycobacterium leprae]
Length=211
Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 108/178 (61%), Positives = 121/178 (68%), Gaps = 10/178 (5%)
Query 34 VDCGRGVLQRAAAVGVGAAGLSA-VLLTHLHGD-------VLITSWVTNFAADPAPLPII 85
+DC GVLQRA+A + THLHGD +LIT WVT FA DP PLPII
Sbjct 1 MDCWLGVLQRASAGPTHTPAVCQRCCSTHLHGDRISDLGDLLITHWVTTFALDPPPLPII 60
Query 86 GPPGTAEVVEATLKAFGHDIGYRIAHHADLTTPPPIEVHEYTAG-PAWDRDGVTIRVAPT 144
G P TAE VEA LKA GHDI Y+I HH L TPP IEV+EYT G DGV+IR T
Sbjct 61 GSPDTAETVEAKLKASGHDIEYQITHHTYLNTPPLIEVYEYTKGFVGAPPDGVSIR-GST 119
Query 145 DHRPVTPTIGFRIESDGASVVLAGDTVPCDSLDQLAAGADALVHTVIRKDIVTQIPQQ 202
+H PVTPTIGFRIES SVVL G TVPC SLD+LAA ADALVHT+IRK+IV ++ QQ
Sbjct 120 NHGPVTPTIGFRIESGPTSVVLTGGTVPCASLDELAAEADALVHTIIRKNIVIRVHQQ 177
>gi|197105711|ref|YP_002131088.1| metallo-beta-lactamase family protein [Phenylobacterium zucineum
HLK1]
gi|196479131|gb|ACG78659.1| metallo-beta-lactamase family protein [Phenylobacterium zucineum
HLK1]
Length=362
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/288 (37%), Positives = 143/288 (50%), Gaps = 28/288 (9%)
Query 2 LEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLTH 61
L + L G GSP+PDP RAGP T V AG Q F+VD G G ++ + + A + A L+TH
Sbjct 54 LHVGLCGAGSPMPDPTRAGPCTAVLAGRQLFIVDAGAGSVKNLSLMNFPPARVDAALITH 113
Query 62 LH-------GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHAD 114
H G++++ W A PAPLP+ GP G +VV+ A+G D GYRIAHH
Sbjct 114 FHSDHIDGLGELMLQRWAGG--AWPAPLPVYGPTGVEQVVDGFEAAYGPDRGYRIAHHGP 171
Query 115 LTTPPP---IEVHEYTAGPA----WDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLA 167
TPP + + G D+ G+ + P H P P +G+R + G SVV++
Sbjct 172 QVTPPSGFGGDPRPFAPGAQDVVLIDQPGLRVTAFPVPHSPAEPAVGYRFDYKGRSVVIS 231
Query 168 GDTVPCDSLDQLAAGADALVHTVIRKDIVTQIPQQRVK-----------DICDYHSSVQE 216
GDT L+ A GAD LVH + +V + K DI YH++ +E
Sbjct 232 GDTAASPRLEAAARGADLLVHEGLSPKLVALQGRSADKGGKANLSHILHDIPSYHATPEE 291
Query 217 AAATANRAGVGTLVMTHYVPAIG-PGQEEQWRALAATEFSGRIEVGND 263
A A RAGV L+ TH +P + E W A ++G I VG D
Sbjct 292 VAGIAQRAGVRYLLFTHVIPPLPIRALEGPWLGKAGKIYAGAIRVGRD 339
>gi|220916746|ref|YP_002492050.1| Ribonuclease Z [Anaeromyxobacter dehalogenans 2CP-1]
gi|219954600|gb|ACL64984.1| Ribonuclease Z [Anaeromyxobacter dehalogenans 2CP-1]
Length=322
Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 101/284 (36%), Positives = 143/284 (51%), Gaps = 18/284 (6%)
Query 2 LEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLTH 61
+ +TLLGTG P P+ DR GPSTLV AG L D GRGV QR + + + AV LTH
Sbjct 26 IRVTLLGTGRPAPEIDRFGPSTLVEAGGHRLLFDAGRGVTQRLWQLRIPLRDVDAVFLTH 85
Query 62 LHG-------DVLITSWV-TNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHA 113
LH D+ +T W+ T F APL + GP GT ++V A +A+ D+ R H
Sbjct 86 LHSDHVVGLPDLWLTGWLPTPFGRRAAPLSLWGPAGTVDMVAALRRAYAWDLRARSGHQQ 145
Query 114 DLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRP-VTPTIGFRIESDGASVVLAGDTVP 172
I + G ++RDGV + DH P + P +G+R++ G SV ++GDT P
Sbjct 146 LPEAGTTIRARDVKQGVVYERDGVKVTAFLVDHGPHLRPALGYRVDHAGRSVAISGDTRP 205
Query 173 CDSLDQLAAGADALVHTV--IRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTLV 230
C++L + AAG D LVH V RK++V + V+ I + H+S ++A R V
Sbjct 206 CENLVRFAAGTDVLVHEVAAARKELVER--SAVVRSILEVHTSPEDAGRVFTRVKPRLAV 263
Query 231 MTHYV-----PAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEV 269
TH P + A T ++G + VG DL V +
Sbjct 264 FTHVALVTTDPDVPAPSVADIIARTRTTYAGPLVVGEDLMTVVI 307
>gi|167646632|ref|YP_001684295.1| ribonuclease Z [Caulobacter sp. K31]
gi|167349062|gb|ABZ71797.1| beta-lactamase domain protein [Caulobacter sp. K31]
Length=364
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/293 (35%), Positives = 142/293 (49%), Gaps = 36/293 (12%)
Query 2 LEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLTH 61
L I L G G+PIPDP RAGP V AG + F+VD G G + + + + A + A+ LTH
Sbjct 54 LHIGLCGAGAPIPDPTRAGPCEAVLAGQRLFVVDAGAGGTKNLSLMNLPPARVEAIFLTH 113
Query 62 LH-------GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHAD 114
H G++++ W A +P+P+ GP G VV + A+ D GYRIAHH
Sbjct 114 FHSDHIDGLGELMLQRW--GGGAATSPVPVYGPTGVDSVVNGFMAAYALDRGYRIAHHGP 171
Query 115 LTTPP--------PIEVHEYTAGPA---WDRDGVTIRVAPTDHRPVTPTIGFRIESDGAS 163
PP P + AGP D G+ + P DH PV P +G+R + G S
Sbjct 172 RVMPPSGFGGAPRPFAIDH--AGPNVVLIDDGGLKVTAFPVDHGPVEPAVGYRFDYKGRS 229
Query 164 VVLAGDTVPCDSLDQLAAGADALVHTVIRKDIV-----TQIPQQR------VKDICDYHS 212
+V++GDT P L+ A G D L H + D+V + +R DI YH+
Sbjct 230 LVISGDTAPSARLEATAKGVDLLAHEGLAPDLVAIQHRAAVAAKRDNLAAVTHDIPSYHT 289
Query 213 SVQEAAATANRAGVGTLVMTHYVPAIGPGQ--EEQWRALAATEFSGRIEVGND 263
+ + AA A RAGV L+ H +P + P + E W + F G + VG D
Sbjct 290 APEAAAGIAQRAGVRYLLFEHIIPPV-PFEALEGPWLGRSRRIFHGAVRVGRD 341
>gi|163792586|ref|ZP_02186563.1| ribonuclease Z [alpha proteobacterium BAL199]
gi|159182291|gb|EDP66800.1| ribonuclease Z [alpha proteobacterium BAL199]
Length=295
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/284 (35%), Positives = 137/284 (49%), Gaps = 18/284 (6%)
Query 2 LEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLTH 61
+++TLLGTG P R GP+ LVR G+ + LVDCG GV QR G L AVLLTH
Sbjct 1 MKVTLLGTGCPQCHTKRYGPANLVRHGSVSVLVDCGSGVTQRLVGAGSPGGKLDAVLLTH 60
Query 62 LHGD-------VLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHAD 114
LH D ++++ W PL I GP GT V+ L + + RIAH
Sbjct 61 LHSDHLVDLYQLIVSGW---HQGRTTPLRIYGPKGTRAYVDGLLALWKDERELRIAHEQR 117
Query 115 LTTPP-PIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIES-DGASVVLAGDTVP 172
++ EV EY GP D G+++ DHRPV GF + DG++ V +GDT
Sbjct 118 PSSAGFTAEVMEYAEGPVVDLPGLSVTAVKVDHRPVEEAYGFVFRADDGSTAVFSGDTRY 177
Query 173 CDSLDQLAAGADALVHTVIRKDIVTQIPQQR----VKDICDYHSSVQEAAATANRAGVGT 228
C +L + A GAD L+H ++ +P R + + YH+ E A A
Sbjct 178 CPALIRAARGADVLIHECFIHGLMKPVPGMRTQVGIDAVASYHTLSAEVGKVATEAEARF 237
Query 229 LVMTHYVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEVHPR 272
L++ H+VPA E A A +F+G +G DL ++ R
Sbjct 238 LMLNHFVPA--EFDREALSAEVARDFTGPFAIGEDLMSYDIPTR 279
>gi|197121970|ref|YP_002133921.1| ribonuclease Z [Anaeromyxobacter sp. K]
gi|196171819|gb|ACG72792.1| Ribonuclease Z [Anaeromyxobacter sp. K]
Length=323
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/284 (36%), Positives = 142/284 (50%), Gaps = 18/284 (6%)
Query 2 LEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLTH 61
+TLLGTG P P+ DR GPSTLV AG L D GRGV QR + + + AV LTH
Sbjct 27 FRVTLLGTGRPAPEIDRFGPSTLVEAGGHRLLFDAGRGVTQRLWQLRMPLRDIDAVFLTH 86
Query 62 LHG-------DVLITSWV-TNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHA 113
LH D+ +T W+ T F PL + GP GT ++V A +A+ D+ R H
Sbjct 87 LHSDHVVGIPDLWLTGWLPTPFGRRVVPLALWGPAGTVDMVAALRRAYAWDLRARSGHQQ 146
Query 114 DLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRP-VTPTIGFRIESDGASVVLAGDTVP 172
+ + G ++RDGV + DH P + P +G+R++ G SVV++GDT P
Sbjct 147 LPDAGATVRARDVGQGVVYERDGVKVTAFTVDHGPHLRPALGYRVDHAGRSVVISGDTRP 206
Query 173 CDSLDQLAAGADALVHTV--IRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTLV 230
C++L + AAGAD LVH V RK++V + R I H+S ++A R V
Sbjct 207 CENLVRFAAGADVLVHEVAAARKELVDRSAVAR--SILAVHTSPEDAGRVFTRVKPRLAV 264
Query 231 MTHYV-----PAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEV 269
TH PA+ + A ++G + VG DL V +
Sbjct 265 FTHVALLTTDPAVPAPSIAELVARTRETYAGPLVVGEDLMTVVI 308
>gi|149927436|ref|ZP_01915691.1| ribonuclease Z [Limnobacter sp. MED105]
gi|149823928|gb|EDM83153.1| ribonuclease Z [Limnobacter sp. MED105]
Length=355
Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/289 (35%), Positives = 140/289 (49%), Gaps = 29/289 (10%)
Query 2 LEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLTH 61
L + L GTGSP PDP RA P TLV AG FL D G ++ A + L V +TH
Sbjct 51 LHVGLCGTGSPFPDPQRAAPCTLVIAGKDMFLFDAGSAAAKQIANMNFSTGQLKGVFITH 110
Query 62 LH-------GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHAD 114
LH G+VL+T W + + L + GP G + V+ A+ D GYR AHH
Sbjct 111 LHSDHIDGLGEVLMTRWAQH--TEGQRLTVHGPTGVSNVLNGFKMAYEADNGYRTAHHGA 168
Query 115 LTTPPPI---EVHEYTAGPA-----WDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVL 166
T PP + +V+E+T + + I +H+P+ P +G+RI G +VVL
Sbjct 169 ATMPPELAGADVNEFTVQKGSTTTVLQQPDLLIEAFAVNHQPINPAVGYRIAYKGRTVVL 228
Query 167 AGDTVPCDSLDQLAAGADALVHTVIRKDIV-----TQIPQQRVK------DICDYHSSVQ 215
+GDT + + A AD LVH + ++V T I QR K DI +YH+S
Sbjct 229 SGDTTSDEQVKNAARKADLLVHEALSPELVARLQDTAIKNQRSKLAKIFSDIPNYHASPL 288
Query 216 EAAATANRAGVGTLVMTHYV-PAIGPGQEEQWRALAATEFSGRIEVGND 263
+ A A A VG +V++H V P P +E + A F G +G D
Sbjct 289 DVAVLAQEAEVGHVVLSHIVPPLPLPPLKEIFLGKAPDVFQGPFRIGED 337
>gi|85708124|ref|ZP_01039190.1| metallo-beta-lactamase family protein [Erythrobacter sp. NAP1]
gi|85689658|gb|EAQ29661.1| metallo-beta-lactamase family protein [Erythrobacter sp. NAP1]
Length=352
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/290 (37%), Positives = 144/290 (50%), Gaps = 32/290 (11%)
Query 2 LEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLTH 61
L + L GTGSP+P+PDRAGP LV AG QA++VD G G + +G +A+LLTH
Sbjct 48 LHLVLCGTGSPLPNPDRAGPCNLVVAGDQAYVVDIGEGGARNLNLMGYFIPSTTALLLTH 107
Query 62 LHGD-------VLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHAD 114
H D + + W APLP+ GP G +VE +A+ D YR+ HH
Sbjct 108 YHSDHVDGIGPLSLLYWTQ--GTKTAPLPVHGPQGLNVLVEGFNRAYELDRTYRVEHHTS 165
Query 115 LTTPP--------PIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVL 166
P P E+ E +R G+ I DH PV P++G+R + G S+V+
Sbjct 166 EIVPETGGGLTAIPFEIGEQPV-TVIERGGLRITAFRVDHDPVRPSVGYRFDYKGRSIVI 224
Query 167 AGDTVPCDSLDQLAAGADALVHTVIRKDIVTQIPQQR-----------VKDICDYHSSVQ 215
+GD DS+ + A GAD LVH ++ +V I +DI DYH++ +
Sbjct 225 SGDAAKSDSIAKAARGADILVHDALQPRLVGHITDALDEAGNEAVATITRDILDYHATPE 284
Query 216 EAAATANRAGVGTLVMTHYVPAIGPGQEEQWRALAATE--FSGRIEVGND 263
EAA TA AGV L+++H VP I P L E F G+I VG D
Sbjct 285 EAAETAQAAGVRHLILSHLVPPI-PNAFFYPAFLGDAEDAFDGKITVGED 333
>gi|254514783|ref|ZP_05126844.1| ribonuclease Z [gamma proteobacterium NOR5-3]
gi|219677026|gb|EED33391.1| ribonuclease Z [gamma proteobacterium NOR5-3]
Length=375
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/274 (34%), Positives = 134/274 (49%), Gaps = 32/274 (11%)
Query 2 LEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLTH 61
L + L G G P+P P+ +GP V AG + F+VD G L+ +G A + AV LTH
Sbjct 69 LHLALCGAGGPLPAPNASGPCVAVVAGKRLFIVDAGTDGLRNLGRMGYAAGSIEAVFLTH 128
Query 62 LH-------GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHAD 114
H G++ WV+ AA+ PLP+ GP G +VV A+ D YR AHH D
Sbjct 129 FHSDHIDGLGELATIRWVS--AANTEPLPVYGPMGVTQVVGGFNMAYALDEQYRHAHHGD 186
Query 115 LTTPPP---IEVHEYTAGPA-------WDRDGVTIRVAPTDHRPVTPTIGFRIESDGASV 164
PP + + A PA +D + + +H P+ P +G+R S+
Sbjct 187 TVAPPSGAGMTAKPF-AAPATGTLTTLFDEADLKVEALAVNHAPIKPAVGYRFTYKDRSL 245
Query 165 VLAGDTVPCDSLDQLAAGADALVHTVIRKDIV-----------TQIPQQRVKDICDYHSS 213
+++GDT D++ Q + G D L+H + ++V +I + DI DYH+S
Sbjct 246 LISGDTSKQDNIRQFSQGVDLLIHEALAPNLVNMMHEAAEAADNEILAKITHDILDYHTS 305
Query 214 VQEAAATANRAGVGTLVMTHYVPAI-GPGQEEQW 246
EAA TA AGVG L+ H VP I PGQE +
Sbjct 306 PVEAAETARDAGVGHLLYYHIVPPIVFPGQETLF 339
>gi|340788141|ref|YP_004753606.1| hydrolase [Collimonas fungivorans Ter331]
gi|340553408|gb|AEK62783.1| hydrolase [Collimonas fungivorans Ter331]
Length=308
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/279 (33%), Positives = 138/279 (50%), Gaps = 21/279 (7%)
Query 3 EITLLGT-GSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLTH 61
++ LLGT G P P RA P+ ++ Q ++VDCG GV + GV + + LTH
Sbjct 31 QLILLGTKGGPTPSALRAAPANVLLVDGQPYVVDCGNGVALQLTKAGVRLPQIRDIFLTH 90
Query 62 LH-------GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHAD 114
H G+++ +W T A P+ + GPPG ++++ + DI R+
Sbjct 91 QHSDHNADLGNLVFLAWATGLAT---PVHLYGPPGMRQMMDDFVHMNAIDIATRMQEEGR 147
Query 115 LTTPPPIEVHEYTAGP--AWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVP 172
P I HE+ GP + D V + A DH + PT +R ++ SVV +GDT
Sbjct 148 PPLRPLINTHEFD-GPRVVMENDQVKVTAALVDHYTLKPTFAYRFDTRDRSVVFSGDTAY 206
Query 173 CDSLDQLAAGADALVHTVIRKDIVTQIPQ------QRVKDICDYHSSVQEAAATANRAGV 226
++L QLA GAD LVH V+ + ++ + + + H+S + A RAGV
Sbjct 207 NENLIQLAKGADVLVHEVMYLPALEKLMKTVDNAPTLLDHLVKSHTSTAQVGKVAARAGV 266
Query 227 GTLVMTHYVPAIGPG-QEEQWRALAATEFSGRIEVGNDL 264
TLV++H+VP P ++ W A A +FSG I VG DL
Sbjct 267 KTLVLSHFVPGGDPAISDDMWSAEARRQFSGEIIVGKDL 305
>gi|154251904|ref|YP_001412728.1| ribonuclease Z [Parvibaculum lavamentivorans DS-1]
gi|154155854|gb|ABS63071.1| beta-lactamase domain protein [Parvibaculum lavamentivorans DS-1]
Length=381
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/281 (34%), Positives = 130/281 (47%), Gaps = 49/281 (17%)
Query 2 LEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLTH 61
L + L GTGSP+PDP RA T V AG ++D G G R A + A + +L TH
Sbjct 56 LHVFLCGTGSPMPDPTRANACTAVIAGGHIVVIDTGPGSWSRIVAGKLPAGKIGTILFTH 115
Query 62 LH-------GDVLITSWVTNFAADPAPLPIIGP-------------------PGTAEVVE 95
LH G+ + SW+ PL + GP GT +VV
Sbjct 116 LHSDHIGALGEFAVQSWI---GGRVVPLEVYGPGKLEGSVPPLNSLGHAYGSSGTVDVVR 172
Query 96 ATLKAFGHDIGYRIAHHA-DLTTPPPIEV--HEY------TAGPAWDRDGVTIRVAPTDH 146
+AF D GYRI HH D +P + HE T P +D+DG+ I DH
Sbjct 173 GFAEAFDSDSGYRILHHGTDYLSPEGARIIGHEIARPAPNTLVPVFDKDGLQISAFLVDH 232
Query 147 RPVTPTIGFRIESDGASVVLAGDTVPCDSLDQLAAGADALVHTVIRKDIVTQIPQ----- 201
PV P G+R+E G +++GDT +S++ + GAD LVH + + + I +
Sbjct 233 HPVEPAFGYRVEYQGRVAIISGDTKRTESVELFSKGADLLVHEALNHSMSSIISEALTET 292
Query 202 ------QRVKDICDYHSSVQEAAATANRAGVGTLVMTHYVP 236
+ V D DYH+S +AA A AGV LV+TH VP
Sbjct 293 DNLRLAKMVHDTLDYHASPVDAAEIARDAGVPMLVLTHIVP 333
>gi|254490530|ref|ZP_05103716.1| metallo-beta-lactamase superfamily, putative [Methylophaga thiooxidans
DMS010]
gi|224464274|gb|EEF80537.1| metallo-beta-lactamase superfamily, putative [Methylophaga thiooxydans
DMS010]
Length=295
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/278 (34%), Positives = 138/278 (50%), Gaps = 13/278 (4%)
Query 2 LEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLTH 61
L +TLLGTG+PIP +R G STL+ + FL D GRG R + +G+ + + + LTH
Sbjct 24 LTVTLLGTGTPIPSIERFGSSTLIEHKGKYFLFDVGRGATIRLSQIGMYPSDIDNIFLTH 83
Query 62 LHGDVLI---TSWVTNFAADPA-PLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHADLTT 117
LH D + W+T A L + GP GT VE T AF D YR +
Sbjct 84 LHSDHITGFDDFWITGGIWQRANTLNVYGPDGTKSFVEHTQGAFSLDAFYREKQSSLNLK 143
Query 118 PPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPCDSLD 177
+ V E G +D DG+ + DH V G+RI+SD SV+++GDT ++L
Sbjct 144 GLEVNVTEIKEGLIYDEDGLKVSAFRVDHGAVEHAYGYRIDSDRHSVLISGDTTYSENLI 203
Query 178 QLAAGADALVH--TVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTLVMTHYV 235
+ D L+H +VI ++ P ++K I YH+S+Q+ + V+ H +
Sbjct 204 ANSQELDLLIHEVSVIEPKLLQSNP--KLKSISKYHTSLQQLHKLVEKVKPQKTVLNHLL 261
Query 236 PAIGPGQEEQWRALAATEFSGR-IEVGNDLHRVEVHPR 272
IG E + L T+F + I+VG+DL + +H R
Sbjct 262 -LIGS-DETELSHLLETKFQDKNIDVGHDL--MTIHLR 295
>gi|241663940|ref|YP_002982300.1| beta-lactamase domain-containing protein [Ralstonia pickettii
12D]
gi|240865967|gb|ACS63628.1| beta-lactamase domain protein [Ralstonia pickettii 12D]
Length=319
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/281 (32%), Positives = 138/281 (50%), Gaps = 19/281 (6%)
Query 3 EITLLGT-GSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLTH 61
+ LLGT G P P +R+ P+ ++ +++VDCG GV ++ G+ + V LTH
Sbjct 42 RLILLGTAGGPTPKKNRSAPAQVIVINGVSYVVDCGNGVARQYVTAGLKLKDIRHVFLTH 101
Query 62 LHGD-------VLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHAD 114
H D +++ +W T+ P+ GPP A + L+ + +DI RIA
Sbjct 102 QHSDHNADYGTLMLLAWATDLTG---PVDAWGPPPLAAMTTKFLELYDYDIRTRIADEGR 158
Query 115 LTTPPPIEVHEYTAGPAWDRD-GVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC 173
P I HE + G +D V + A H PV+P FR +S S+V++GDT P
Sbjct 159 PPLAPMIHPHEISEGGLVMQDANVKVTSALVKHPPVSPAFAFRFDSADRSIVISGDTAPS 218
Query 174 DSLDQLAAGADALVHTVIR----KDIVTQIPQQRV--KDICDYHSSVQEAAATANRAGVG 227
++L +LA GAD LVH V+ +++ P + + + H+S +E A A V
Sbjct 219 ENLVRLAYGADVLVHEVMHLPSLDKLLSTEPNAKTLREHLLASHTSTEEVGRIATEAKVK 278
Query 228 TLVMTHYVPAIGPGQEEQ-WRALAATEFSGRIEVGNDLHRV 267
TLV++H+VP P E+ W F G I VG+DL +
Sbjct 279 TLVLSHFVPGGYPYLEDSVWLDAVRPHFKGEIIVGHDLQEI 319
>gi|16125428|ref|NP_419992.1| ribonuclease Z [Caulobacter crescentus CB15]
gi|13422498|gb|AAK23160.1| metallo-beta-lactamase family protein [Caulobacter crescentus
CB15]
Length=317
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/291 (33%), Positives = 144/291 (50%), Gaps = 32/291 (10%)
Query 2 LEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLTH 61
L + L G GSP+ DP R+GP V AG F+VD G G + + + +SAV +TH
Sbjct 8 LHVGLCGAGSPMADPLRSGPCVAVVAGKDLFVVDSGSGSTRNLLLMNMPPPRVSAVFITH 67
Query 62 LH-------GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHAD 114
H G++++ W A P P+ GP G +VV+ +A+ D GYRIAHH +
Sbjct 68 YHSDHIADLGELMLQRWAG--GASKTPTPVYGPQGLEQVVQGFEQAYTLDRGYRIAHHGE 125
Query 115 LTTPPP---IEVHEYTAGPA------WDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVV 165
PP + + A PA ++ G+ + P H PV +G+R E G SVV
Sbjct 126 AVAPPSGFGGDPRPFVADPAAPDVLVLEKPGLKVWAFPVAHHPVEGAVGYRFEYKGRSVV 185
Query 166 LAGDTVPCDSLDQLAAGADALVH-------TVIRKDIVTQIPQQR----VKDICDYHSSV 214
++GDT P + L + + GAD L+H ++KD+ ++ + DI DYH++
Sbjct 186 ISGDTGPSERLVKASKGADLLLHEGLAPNLVAVQKDVADKMGRDNYAKIFHDILDYHTAP 245
Query 215 QEAAATANRAGVGTLVMTHYVPAIGPGQEEQWRALAATE--FSGRIEVGND 263
+ AA A AGVG L+ H +P + P + L + F G I+VG D
Sbjct 246 EVAAEEAKAAGVGALMFYHIIPPL-PVRALDGPFLGRSREIFDGPIKVGRD 295
>gi|221234171|ref|YP_002516607.1| ribonuclease Z [Caulobacter crescentus NA1000]
gi|220963343|gb|ACL94699.1| metal-dependent hydrolase [Caulobacter crescentus NA1000]
Length=363
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/291 (33%), Positives = 144/291 (50%), Gaps = 32/291 (10%)
Query 2 LEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLTH 61
L + L G GSP+ DP R+GP V AG F+VD G G + + + +SAV +TH
Sbjct 54 LHVGLCGAGSPMADPLRSGPCVAVVAGKDLFVVDSGSGSTRNLLLMNMPPPRVSAVFITH 113
Query 62 LH-------GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHAD 114
H G++++ W A P P+ GP G +VV+ +A+ D GYRIAHH +
Sbjct 114 YHSDHIADLGELMLQRWAGG--ASKTPTPVYGPQGLEQVVQGFEQAYTLDRGYRIAHHGE 171
Query 115 LTTPPP---IEVHEYTAGPA------WDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVV 165
PP + + A PA ++ G+ + P H PV +G+R E G SVV
Sbjct 172 AVAPPSGFGGDPRPFVADPAAPDVLVLEKPGLKVWAFPVAHHPVEGAVGYRFEYKGRSVV 231
Query 166 LAGDTVPCDSLDQLAAGADALVH-------TVIRKDIVTQIPQQR----VKDICDYHSSV 214
++GDT P + L + + GAD L+H ++KD+ ++ + DI DYH++
Sbjct 232 ISGDTGPSERLVKASKGADLLLHEGLAPNLVAVQKDVADKMGRDNYAKIFHDILDYHTAP 291
Query 215 QEAAATANRAGVGTLVMTHYVPAIGPGQEEQWRALAATE--FSGRIEVGND 263
+ AA A AGVG L+ H +P + P + L + F G I+VG D
Sbjct 292 EVAAEEAKAAGVGALMFYHIIPPL-PVRALDGPFLGRSREIFDGPIKVGRD 341
>gi|187929827|ref|YP_001900314.1| beta-lactamase domain-containing protein [Ralstonia pickettii
12J]
gi|187726717|gb|ACD27882.1| beta-lactamase domain protein [Ralstonia pickettii 12J]
Length=321
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/281 (32%), Positives = 139/281 (50%), Gaps = 19/281 (6%)
Query 3 EITLLGT-GSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLTH 61
+ LLGT G P P +R+ P+ ++ +++VDCG GV ++ G+ + V +TH
Sbjct 44 RLILLGTAGGPTPKKNRSAPAQVIVINGVSYVVDCGNGVARQYVTAGLKLKDIRHVFITH 103
Query 62 LHGD-------VLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHAD 114
H D +++ +W T+ P+ GPP A + L+ + +DI RIA
Sbjct 104 QHSDHNADYGTLMLLAWATDLTG---PVDAWGPPPLAAMTTKFLELYDYDIRTRIADEGR 160
Query 115 LTTPPPIEVHEYTAGPAWDRD-GVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC 173
P + HE T G +D V + A H PV+P FR +S S+V++GDT P
Sbjct 161 PPLAPMLHPHELTEGGLVMQDANVKVTSALVKHPPVSPAFAFRFDSADRSIVISGDTAPS 220
Query 174 DSLDQLAAGADALVHTVIR-----KDIVTQIPQQRVKD-ICDYHSSVQEAAATANRAGVG 227
++L +LA GAD LVH V+ K + T+ + +++ + H+S +E A A V
Sbjct 221 ENLVRLAYGADVLVHEVMHLPSLDKLLSTEPNAKTLREHLLASHTSTEEVGRIATEAKVK 280
Query 228 TLVMTHYVPAIGPGQEEQ-WRALAATEFSGRIEVGNDLHRV 267
TLV++H+VP P E+ W F G I VG DL +
Sbjct 281 TLVLSHFVPGGYPYLEDSVWLDAVRPHFKGEIIVGRDLQEI 321
>gi|309781470|ref|ZP_07676206.1| hydrolase [Ralstonia sp. 5_7_47FAA]
gi|308919883|gb|EFP65544.1| hydrolase [Ralstonia sp. 5_7_47FAA]
Length=319
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/281 (32%), Positives = 137/281 (49%), Gaps = 19/281 (6%)
Query 3 EITLLGT-GSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLTH 61
+ LLGT G P P +R+ P+ ++ +++VDCG GV ++ G+ + V LTH
Sbjct 42 RLILLGTAGGPTPKKNRSAPAQVIVINGVSYVVDCGNGVARQYVTAGLKLKDIRHVFLTH 101
Query 62 LHGD-------VLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHAD 114
H D +++ +W T+ P+ GPP A + L+ + +DI RIA
Sbjct 102 QHSDHNADYGTLMLLAWATDLTG---PVDAWGPPPLAAMTTKFLELYDYDIRTRIADEGR 158
Query 115 LTTPPPIEVHEYTAGPAWDRD-GVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC 173
P I HE + G +D V + A H PV+P FR +S S+V++GDT P
Sbjct 159 PPLAPMIHPHEISEGGLVMQDANVKVTSALVKHPPVSPAFAFRFDSADRSIVISGDTAPS 218
Query 174 DSLDQLAAGADALVHTVIR----KDIVTQIPQQRV--KDICDYHSSVQEAAATANRAGVG 227
++L +LA GAD LVH V+ +++ P + + + H+S E A A V
Sbjct 219 ENLVRLAYGADVLVHEVMHLPSLDKLLSTEPNAKTLREHLLASHTSTDEVGRIATEAKVK 278
Query 228 TLVMTHYVPAIGPGQEEQ-WRALAATEFSGRIEVGNDLHRV 267
TLV++H+VP P E+ W F G I VG+DL +
Sbjct 279 TLVLSHFVPGGYPYLEDSVWLDAVRPHFKGEIIVGHDLQEI 319
>gi|114799524|ref|YP_760010.1| ribonuclease Z [Hyphomonas neptunium ATCC 15444]
gi|114739698|gb|ABI77823.1| metallo-beta-lactamase family protein [Hyphomonas neptunium ATCC
15444]
Length=362
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/292 (35%), Positives = 144/292 (50%), Gaps = 33/292 (11%)
Query 2 LEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLTH 61
L + + G+GSP+PD RAGP V AG +AF+ D G G ++R +G + L+H
Sbjct 54 LHLYVCGSGSPLPDAARAGPCIGVLAGDRAFIFDVGAGSIRRLTRMGFPTGRTEKLYLSH 113
Query 62 LH-------GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHAD 114
LH G+++I +WV + APLP+ GP G AEV+ A+ D YR+AHH
Sbjct 114 LHSDHFDGIGELMIGAWVG--GSRSAPLPVAGPEGVAEVMNGFNAAYRIDSTYRMAHHGP 171
Query 115 LTTPP-----PIEVHEYTAGPA-----WDRDGVTIRVAPTDHRPVTPTIGFRIESDGASV 164
P EV + AGP D + I +H P+ P GFRI+ G S
Sbjct 172 GVANPDGYGLAPEVIDLPAGPGSRAVLLDEGDLLITAFLVNHSPIEPAYGFRIDYKGRSA 231
Query 165 VLAGDTVPCDSLDQLAAGADALVHTVIRKDIV----------TQIPQQRV-KDICDYHSS 213
V++GDTV ++L ++ GAD L H + ++V P +V DI +YH+S
Sbjct 232 VISGDTVYSENLVAVSEGADILFHEALHPEMVAAMSSAAAEAGAAPLSKVFSDILNYHAS 291
Query 214 VQEAAATANRAGVGTLVMTHYVPAIGPGQEEQWRALAAT--EFSGRIEVGND 263
EAA A AG G LV+ H VP + P + L T FSG +++ D
Sbjct 292 PVEAARAAQSAGAGRLVLYHTVPPL-PSKLLYPYFLDGTGEAFSGPVDIAED 342
>gi|119474698|ref|ZP_01615051.1| ribonuclease Z [marine gamma proteobacterium HTCC2143]
gi|119450901|gb|EAW32134.1| ribonuclease Z [marine gamma proteobacterium HTCC2143]
Length=347
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/258 (35%), Positives = 125/258 (49%), Gaps = 24/258 (9%)
Query 2 LEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLTH 61
LE+ + G+ SP+PDP RA +VRAG + FLVD G G + GV + +LLTH
Sbjct 52 LEVMVCGSSSPLPDPSRAQACIMVRAGNRIFLVDAGSGSAEVLRLEGVPMQLIGTILLTH 111
Query 62 LH-------GDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHAD 114
H DV + SWV A PA L I+GP G VV A+G D YR AHH +
Sbjct 112 FHSDHISAIADVNLGSWV---AGRPARLQIVGPEGVNSVVAGFNLAYGLDRSYRTAHHGE 168
Query 115 LTTPP---PIEVHEYTAGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTV 171
P ++ T G + D +TI DH P++P +G+R + G SVV+ GDT+
Sbjct 169 DFLPSVLGALQAQTITPGVIYAEDELTITAFEVDHAPISPAVGYRFDYMGRSVVVTGDTI 228
Query 172 PCDSLDQLAAGADALVHTVIRKDIVTQIPQ-----------QRVKDICDYHSSVQEAAAT 220
++ A AD L+ + D++ + + +KDI DYH+ +
Sbjct 229 VTKGIEVAAKDADLLLTDALSHDLINAMSEGAAAGGMDRGATILKDIMDYHADTKNIGKM 288
Query 221 ANRAGVGTLVMTHYVPAI 238
A AGVG + H VP +
Sbjct 289 AAAAGVGQVAFYHLVPPV 306
>gi|299065910|emb|CBJ37090.1| putative arylsulfatase (Aryl-sulfate sulphohydrolase) [Ralstonia
solanacearum CMR15]
Length=320
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/278 (31%), Positives = 139/278 (50%), Gaps = 19/278 (6%)
Query 3 EITLLGTGS-PIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLTH 61
+ LLGTG P P +R+ P+ ++ +++VDCG GV ++ + G+ + V +TH
Sbjct 43 RLILLGTGGGPTPKKNRSAPAQVIVINGVSYVVDCGNGVARQYVSAGLKLKAIRHVFITH 102
Query 62 LHGD-------VLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHAD 114
H D +++ +W T+ P+ GPP AE+ L+ + +DI RIA
Sbjct 103 QHSDHNADYGALMLLAWGTDLTG---PVDTWGPPPLAEMTTKFLELYDYDIRTRIADEGR 159
Query 115 LTTPPPIEVHEYTAGPAWDRD-GVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC 173
P + HE T G +D V + A H PV+P +R ++ S+V++GDT P
Sbjct 160 PPLAPMLHPHELTEGGLVMQDANVKVTSALVKHPPVSPAFAYRFDAADRSIVISGDTAPS 219
Query 174 DSLDQLAAGADALVHTVIR-----KDIVTQIPQQRVKD-ICDYHSSVQEAAATANRAGVG 227
++L +LA GAD LVH V+ K + T+ +++ + H+S ++ A A V
Sbjct 220 ENLVRLAHGADVLVHEVMHLPSLDKLLATERNATTLREHLLASHTSAEDVGRIATEAKVK 279
Query 228 TLVMTHYVPAIGPGQEEQ-WRALAATEFSGRIEVGNDL 264
TLV++H+VP P ++ W F G I VG DL
Sbjct 280 TLVLSHFVPGGYPYLDDAVWLDAVRPHFKGEIIVGRDL 317
>gi|334195076|gb|AEG68261.1| arylsulfatase precursor (aryl-sulfate sulfohydrolase) protein
[Ralstonia solanacearum Po82]
Length=321
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/278 (31%), Positives = 138/278 (50%), Gaps = 19/278 (6%)
Query 3 EITLLGTGS-PIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLTH 61
+ LLGTG P P +R+ P+ ++ +++VDCG GV ++ + G+ + V +TH
Sbjct 44 RLILLGTGGGPTPKKNRSAPAQVIVINGVSYVVDCGNGVARQYVSAGLKLKAIRHVFITH 103
Query 62 LHGD-------VLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHAD 114
H D +++ +W T+ P+ GPP A + L+ + +DI RIA
Sbjct 104 QHSDHNADYGALMLLAWGTDLTG---PVDTWGPPPLAAMTTKFLELYDYDIRTRIADEGR 160
Query 115 LTTPPPIEVHEYTAGPAWDRD-GVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC 173
P + HE T G +D V + A H PV+P +R ++ S+V++GDT P
Sbjct 161 PPLAPMLHPHELTEGGLVMQDANVKVTSALVKHPPVSPAFAYRFDAADRSIVISGDTAPS 220
Query 174 DSLDQLAAGADALVHTVIRKDIVTQI--PQQRVKDICDY----HSSVQEAAATANRAGVG 227
++L +LA GAD LVH V+ + Q+ ++ K + ++ H+ +E A A V
Sbjct 221 ENLVRLAHGADVLVHEVMHLPSLDQLLSTERNAKTLREHLLASHTPAEEVGRIATEAKVK 280
Query 228 TLVMTHYVPAIGPGQEEQ-WRALAATEFSGRIEVGNDL 264
TLV++H+VP P ++ W F G I VG DL
Sbjct 281 TLVLSHFVPGGYPNLDDSVWLDAVRPHFKGEIIVGRDL 318
>gi|117618007|ref|YP_855738.1| ribonuclease Z, putative [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117559414|gb|ABK36362.1| ribonuclease Z, putative [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length=346
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/281 (32%), Positives = 133/281 (48%), Gaps = 16/281 (5%)
Query 1 MLEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLT 60
+ ++LLGTG+P+P R G STLV AG Q + D GR R + + ++A LT
Sbjct 48 IFRVSLLGTGTPVPQISRGGYSTLVEAGNQKLVFDFGRNSATRLWQLHIPIGRVNAFFLT 107
Query 61 HLHG-------DVLITSWVT-NFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHH 112
H H D+ +T W+ + AP+ + GP GT + +A+ DI R+
Sbjct 108 HFHSDHTNGLADLWLTGWLQPAYGQRHAPMELYGPRGTDALAHGLQQAYATDIATRVKDE 167
Query 113 ADLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHR-PVTPTIGFRIESDGASVVLAGDTV 171
I HE TAG +D+DGV + DH + P+ G+RI+ G SVVL+GDT
Sbjct 168 GTPLDGVKINSHEVTAGVVYDQDGVKVTAFDNDHGVNIKPSFGYRIDYHGHSVVLSGDTR 227
Query 172 PCDSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTLVM 231
+ + A GAD LVH V + I + +S ++AA N A V
Sbjct 228 YSPQVVKEAKGADLLVHCVSMTSAARMKANPGYRAIAGHLASPEQAARVLNEAKPALTVF 287
Query 232 THYVPAIGPGQEEQWRALAAT---EFSGRIEVGNDLHRVEV 269
+H IG + + LA + +SG +GNDL ++++
Sbjct 288 SH----IGLNGKITVKDLAQSLRARYSGPFVIGNDLMQIDL 324
>gi|206590350|emb|CAQ37311.1| arylsulfatase precursor (aryl-sulfate sulphohydrolase) protein
[Ralstonia solanacearum MolK2]
Length=321
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/278 (31%), Positives = 138/278 (50%), Gaps = 19/278 (6%)
Query 3 EITLLGTGS-PIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLTH 61
+ LLGTG P P +R+ P+ ++ +++VDCG GV ++ + G+ + V +TH
Sbjct 44 RLILLGTGGGPTPKKNRSAPAQVIVINGVSYVVDCGNGVARQYVSAGLKLKAIRHVFITH 103
Query 62 LHGD-------VLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHAD 114
H D +++ +W T+ P+ GPP A + L+ + +DI RIA
Sbjct 104 QHSDHNADYGALMLLAWGTDLTG---PVDTWGPPPLAAMTTKFLELYDYDIRTRIADEGR 160
Query 115 LTTPPPIEVHEYTAGPAWDRD-GVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC 173
P + HE T G +D V + A H PV+P +R ++ S+V++GDT P
Sbjct 161 PPLAPMLHPHELTEGGLVMQDANVKVTSALVKHPPVSPAFAYRFDAADRSIVISGDTAPS 220
Query 174 DSLDQLAAGADALVHTVIR-----KDIVTQIPQQRVKD-ICDYHSSVQEAAATANRAGVG 227
++L +LA GAD LVH V+ K + T+ + +++ + H+ +E A A V
Sbjct 221 ENLVRLAYGADVLVHEVMHLPSLDKLLSTERNAKTLREHLLASHTPAEEVGRIATEAKVK 280
Query 228 TLVMTHYVPAIGPGQEEQ-WRALAATEFSGRIEVGNDL 264
TLV++H+VP P ++ W F G I VG DL
Sbjct 281 TLVLSHFVPGGYPNLDDSVWLDAVRPHFKGEIIVGRDL 318
>gi|83749087|ref|ZP_00946093.1| Metal-dependent hydrolase [Ralstonia solanacearum UW551]
gi|207742546|ref|YP_002258938.1| arylsulfatase precursor (aryl-sulfate sulphohydrolase) protein
[Ralstonia solanacearum IPO1609]
gi|83724277|gb|EAP71449.1| Metal-dependent hydrolase [Ralstonia solanacearum UW551]
gi|206593938|emb|CAQ60865.1| arylsulfatase precursor (aryl-sulfate sulphohydrolase) protein
[Ralstonia solanacearum IPO1609]
Length=321
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/278 (31%), Positives = 138/278 (50%), Gaps = 19/278 (6%)
Query 3 EITLLGTGS-PIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLTH 61
+ LLGTG P P +R+ P+ ++ +++VDCG GV ++ + G+ + V +TH
Sbjct 44 RLILLGTGGGPTPKKNRSAPAQVIVINGVSYVVDCGNGVARQYVSAGLKLKAIRHVFITH 103
Query 62 LHGD-------VLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHAD 114
H D +++ +W T+ P+ GPP A + L+ + +DI RIA
Sbjct 104 QHSDHNADYGALMLLAWGTDLTG---PVDTWGPPPLAAMTTKFLELYDYDIRTRIADEGR 160
Query 115 LTTPPPIEVHEYTAGPAWDRD-GVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC 173
P + HE T G +D V + A H PV+P +R ++ S+V++GDT P
Sbjct 161 PPLAPMLHPHELTEGGLVMQDANVKVTSALVKHPPVSPAFAYRFDAADRSIVISGDTAPS 220
Query 174 DSLDQLAAGADALVHTVIR-----KDIVTQIPQQRVKD-ICDYHSSVQEAAATANRAGVG 227
++L +LA GAD LVH V+ K + T+ + +++ + H+ +E A A V
Sbjct 221 ENLVRLAYGADVLVHEVMHLPSLDKLLSTERNAKTLREHLLASHTPAEEVGRIATEAKVK 280
Query 228 TLVMTHYVPAIGPGQEEQ-WRALAATEFSGRIEVGNDL 264
TLV++H+VP P ++ W F G I VG DL
Sbjct 281 TLVLSHFVPGGYPNLDDSVWLDAVRPHFKGEIIVGRDL 318
>gi|300703243|ref|YP_003744845.1| arylsulfatase [Ralstonia solanacearum CFBP2957]
gi|299070906|emb|CBJ42208.1| putative arylsulfatase (Aryl-sulfate sulphohydrolase) [Ralstonia
solanacearum CFBP2957]
Length=321
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/278 (31%), Positives = 138/278 (50%), Gaps = 19/278 (6%)
Query 3 EITLLGTGS-PIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLTH 61
+ LLGTG P P +R+ P+ ++ +++VDCG GV ++ + G+ + V +TH
Sbjct 44 RLILLGTGGGPTPKKNRSAPAQVIVINGVSYVVDCGNGVARQYVSAGLKLKAIRHVFITH 103
Query 62 LHGD-------VLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHAD 114
H D +++ +W T+ P+ GPP A + L+ + +DI RIA
Sbjct 104 QHSDHNADYGALMLLAWGTDLTG---PVDTWGPPPLAAMTTKFLELYDYDIRTRIADEGR 160
Query 115 LTTPPPIEVHEYT-AGPAWDRDGVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC 173
P + HE T AG V + A +H PV+P +R ++ S+V++GDT P
Sbjct 161 PPLAPMLHPHELTEAGLVMQDANVKVTSALVEHPPVSPAFAYRFDAADRSIVISGDTAPS 220
Query 174 DSLDQLAAGADALVHTVIRKDIVTQI--PQQRVKDICDY----HSSVQEAAATANRAGVG 227
++L +LA GAD LVH V+ + Q+ ++ K + ++ H+ +E A A V
Sbjct 221 ENLVRLAYGADVLVHEVMHLPSLDQLLSTERNAKTLREHLLASHTPAEEVGRIATEAKVK 280
Query 228 TLVMTHYVPAIGPGQEE-QWRALAATEFSGRIEVGNDL 264
TLV++H+VP P ++ W F G I VG DL
Sbjct 281 TLVLSHFVPGGYPYLDDAAWLDAVRPHFKGEIIVGRDL 318
>gi|17547214|ref|NP_520616.1| hydrolase [Ralstonia solanacearum GMI1000]
gi|17429516|emb|CAD16202.1| probable arylsulfatase precursor (aryl-sulfate sulphohydrolase)
protein [Ralstonia solanacearum GMI1000]
Length=320
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/278 (31%), Positives = 140/278 (51%), Gaps = 19/278 (6%)
Query 3 EITLLGTGS-PIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLTH 61
+ LLGTG P P +R+ P+ ++ +++VDCG GV ++ + G+ + V +TH
Sbjct 43 RLILLGTGGGPTPKKNRSAPAQVIVINGVSYVVDCGNGVARQYVSAGLTLKAIRHVFITH 102
Query 62 LHGD-------VLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHAD 114
H D +++ +W T+ A P+ GPP A + L+ + +DI RIA
Sbjct 103 QHSDHNADYGALMLLAWGTDLAG---PVDAWGPPPLAAMTARFLELYDYDIRTRIADEGR 159
Query 115 LTTPPPIEVHEYTAGPAWDRD-GVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC 173
P + HE T G +D V + A H PV+P +R ++ S+V++GDT P
Sbjct 160 PPLAPMLHPHELTEGGLVMQDANVKVTSALVKHPPVSPAFAYRFDAADRSIVISGDTAPS 219
Query 174 DSLDQLAAGADALVHTVIR-----KDIVTQIPQQRVKD-ICDYHSSVQEAAATANRAGVG 227
++L +LA GAD LVH V+ K + T+ + +++ + H+S ++ A A V
Sbjct 220 ENLVRLAHGADVLVHEVMHLPSLDKLLSTEPNAKTLREHLLASHTSAEDVGRIATEAKVK 279
Query 228 TLVMTHYVPAIGPGQEE-QWRALAATEFSGRIEVGNDL 264
TLV++H+VP P ++ W F G I VG DL
Sbjct 280 TLVLSHFVPGGYPYLDDAAWLDAVRPHFKGEIIVGRDL 317
>gi|300690635|ref|YP_003751630.1| arylsulfatase (aryl-sulfate sulphohydrolase) [Ralstonia solanacearum
PSI07]
gi|299077695|emb|CBJ50331.1| putative arylsulfatase (Aryl-sulfate sulphohydrolase) [Ralstonia
solanacearum PSI07]
Length=321
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/278 (31%), Positives = 139/278 (50%), Gaps = 19/278 (6%)
Query 3 EITLLGTGS-PIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLTH 61
+ LLGTG P P +R+ P+ ++ +++VDCG GV ++ + G+ + V +TH
Sbjct 44 RLILLGTGGGPTPKKNRSAPAQVIVINGVSYVVDCGNGVARQYVSAGLKLRAIRHVFITH 103
Query 62 LHGD-------VLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHAD 114
H D +++ +W T+ A P+ GPP A + L+ + +DI RIA
Sbjct 104 QHSDHNADYGALMLLAWGTDLAG---PVDAWGPPPLAAMTAKFLELYDYDIRTRIADEGR 160
Query 115 LTTPPPIEVHEYTAGPAWDRD-GVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC 173
P + HE T G +D V + A H PV+P +R ++ S+V++GDT P
Sbjct 161 PPLAPMLHPHELTEGGLVMQDANVKVTSALVKHPPVSPAFAYRFDAADRSIVISGDTAPS 220
Query 174 DSLDQLAAGADALVHTVIR-----KDIVTQIPQQRVKD-ICDYHSSVQEAAATANRAGVG 227
++L +LA GAD LVH V+ K + T+ +++ + H+S ++ A A V
Sbjct 221 ENLVRLAYGADVLVHEVMHLPSLDKLLSTEPNATTLREHLLASHTSTEDVGRIATEAKVK 280
Query 228 TLVMTHYVPAIGPGQEEQ-WRALAATEFSGRIEVGNDL 264
TLV++H+VP P ++ W F G I VG DL
Sbjct 281 TLVLSHFVPGGYPYLDDAVWLDAVRPHFKGEIIVGRDL 318
>gi|344167403|emb|CCA79626.1| putative arylsulfatase (Aryl-sulfate sulphohydrolase) [blood
disease bacterium R229]
Length=321
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/278 (31%), Positives = 139/278 (50%), Gaps = 19/278 (6%)
Query 3 EITLLGTGS-PIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLTH 61
+ LLGTG P P +R+ P+ ++ +++VDCG GV ++ + G+ + V +TH
Sbjct 44 RLILLGTGGGPTPKKNRSAPAQVIVINGVSYVVDCGNGVARQYVSAGLKLRAIRHVFITH 103
Query 62 LHGD-------VLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHAD 114
H D +++ +W T+ A P+ GPP A + L+ + +DI RIA
Sbjct 104 QHSDHNADYGALMLLAWGTDLAG---PVDAWGPPPLAAMTTKFLELYDYDIRTRIADEGR 160
Query 115 LTTPPPIEVHEYTAGPAWDRD-GVTIRVAPTDHRPVTPTIGFRIESDGASVVLAGDTVPC 173
P + HE T G +D V + A H PV+P +R ++ S+V++GDT P
Sbjct 161 PPLAPMLHPHELTEGGLVMQDANVKVTSALVKHPPVSPAFAYRFDAADRSIVISGDTAPS 220
Query 174 DSLDQLAAGADALVHTVIR-----KDIVTQIPQQRVKD-ICDYHSSVQEAAATANRAGVG 227
++L +LA GAD LVH V+ K + T+ +++ + H+S ++ A A V
Sbjct 221 ENLVRLAYGADVLVHEVMHLPSLDKLLSTEPNATTLREHLLASHTSTEDVGRIATEAKVK 280
Query 228 TLVMTHYVPAIGPGQEEQ-WRALAATEFSGRIEVGNDL 264
TLV++H+VP P ++ W F G I VG DL
Sbjct 281 TLVLSHFVPGGYPYLDDAVWLDAVRPHFKGEIIVGRDL 318
>gi|330830709|ref|YP_004393661.1| ribonuclease Z [Aeromonas veronii B565]
gi|328805845|gb|AEB51044.1| Ribonuclease Z, putative [Aeromonas veronii B565]
Length=340
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/281 (31%), Positives = 131/281 (47%), Gaps = 16/281 (5%)
Query 1 MLEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLT 60
+ ++LLGTG+P+P R G STLV AG Q + D GR R + + ++A LT
Sbjct 44 IFRVSLLGTGTPVPQISRGGYSTLVEAGNQKLVFDFGRNSATRLWQLHIPIGRVNAFFLT 103
Query 61 HLHG-------DVLITSWVT-NFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHH 112
H H D+ +T W+ + AP+ + GP T + +A+ DI R+
Sbjct 104 HFHSDHTNGLADLWLTGWLQPAYGQRHAPMELYGPKSTDALASGLQQAYATDIATRVKDE 163
Query 113 ADLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHR-PVTPTIGFRIESDGASVVLAGDTV 171
I HE TAG ++ DGV + DH + P+ G+RI+ G SVVL+GDT
Sbjct 164 GTPLDGVEINSHEVTAGVVYNHDGVKVTAFDNDHGVNIKPSFGYRIDYHGHSVVLSGDTR 223
Query 172 PCDSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVGTLVM 231
+ + A GAD LVH V K I + +S ++AA N A V
Sbjct 224 YSPEVVKQAKGADLLVHCVSMTSAEQMKANPGYKAIAGHLASPEQAAQVMNEAKPALTVF 283
Query 232 THYVPAIGPGQEEQWRALAA---TEFSGRIEVGNDLHRVEV 269
+H IG + + + LA +SG +GNDL ++++
Sbjct 284 SH----IGLNGKIRVKDLAQDLRARYSGPFVIGNDLMQIDL 320
Lambda K H
0.319 0.136 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 426144143792
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40