BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2411c Length=551 Score E Sequences producing significant alignments: (Bits) Value gi|15609548|ref|NP_216927.1| hypothetical protein Rv2411c [Mycob... 1125 0.0 gi|289754518|ref|ZP_06513896.1| conserved hypothetical protein [... 1117 0.0 gi|294994481|ref|ZP_06800172.1| hypothetical protein Mtub2_08193... 1108 0.0 gi|340627422|ref|YP_004745874.1| hypothetical protein MCAN_24451... 1087 0.0 gi|15827247|ref|NP_301510.1| hypothetical protein ML0605 [Mycoba... 960 0.0 gi|466974|gb|AAA17160.1| u1937b [Mycobacterium leprae] 956 0.0 gi|183983712|ref|YP_001852003.1| hypothetical protein MMAR_3732 ... 954 0.0 gi|41408321|ref|NP_961157.1| hypothetical protein MAP2223c [Myco... 951 0.0 gi|240170817|ref|ZP_04749476.1| hypothetical protein MkanA1_1599... 951 0.0 gi|254774589|ref|ZP_05216105.1| hypothetical protein MaviaA2_079... 950 0.0 gi|296170533|ref|ZP_06852117.1| UDP-N-acetylmuramate dehydrogena... 941 0.0 gi|118618943|ref|YP_907275.1| hypothetical protein MUL_3675 [Myc... 941 0.0 gi|336458242|gb|EGO37223.1| hypothetical protein MAPs_15370 [Myc... 931 0.0 gi|342857811|ref|ZP_08714467.1| hypothetical protein MCOL_03005 ... 930 0.0 gi|254819868|ref|ZP_05224869.1| hypothetical protein MintA_08084... 925 0.0 gi|118467439|ref|YP_888839.1| hypothetical protein MSMEG_4570 [M... 883 0.0 gi|108800475|ref|YP_640672.1| hypothetical protein Mmcs_3509 [My... 882 0.0 gi|145223253|ref|YP_001133931.1| hypothetical protein Mflv_2666 ... 877 0.0 gi|120404865|ref|YP_954694.1| hypothetical protein Mvan_3911 [My... 872 0.0 gi|169628725|ref|YP_001702374.1| hypothetical protein MAB_1635 [... 833 0.0 gi|226360418|ref|YP_002778196.1| hypothetical protein ROP_10040 ... 805 0.0 gi|111018294|ref|YP_701266.1| hypothetical protein RHA1_ro01284 ... 804 0.0 gi|333918819|ref|YP_004492400.1| hypothetical protein AS9A_1148 ... 795 0.0 gi|229493138|ref|ZP_04386930.1| conserved hypothetical protein [... 786 0.0 gi|226307253|ref|YP_002767213.1| hypothetical protein RER_37660 ... 784 0.0 gi|262203073|ref|YP_003274281.1| hypothetical protein Gbro_3183 ... 781 0.0 gi|296140493|ref|YP_003647736.1| hypothetical protein Tpau_2799 ... 779 0.0 gi|317507854|ref|ZP_07965555.1| hypothetical protein HMPREF9336_... 778 0.0 gi|343926798|ref|ZP_08766291.1| hypothetical protein GOALK_072_0... 755 0.0 gi|296392908|ref|YP_003657792.1| hypothetical protein Srot_0474 ... 754 0.0 gi|256375351|ref|YP_003099011.1| hypothetical protein Amir_1213 ... 753 0.0 gi|302531218|ref|ZP_07283560.1| DUF404 domain-containing protein... 723 0.0 gi|300791010|ref|YP_003771301.1| hypothetical protein AMED_9210 ... 715 0.0 gi|158313932|ref|YP_001506440.1| hypothetical protein Franean1_2... 630 1e-178 gi|312198642|ref|YP_004018703.1| hypothetical protein FraEuI1c_4... 630 2e-178 gi|111223940|ref|YP_714734.1| hypothetical protein FRAAL4547 [Fr... 625 5e-177 gi|288920571|ref|ZP_06414877.1| protein of unknown function DUF4... 625 7e-177 gi|336177739|ref|YP_004583114.1| hypothetical protein FsymDg_174... 619 3e-175 gi|119960999|ref|YP_947876.1| hypothetical protein AAur_2132 [Ar... 609 5e-172 gi|116670678|ref|YP_831611.1| hypothetical protein Arth_2131 [Ar... 607 2e-171 gi|148271675|ref|YP_001221236.1| hypothetical protein CMM_0496 [... 602 7e-170 gi|170780706|ref|YP_001709038.1| hypothetical protein CMS_0252 [... 602 8e-170 gi|88856624|ref|ZP_01131280.1| hypothetical protein A20C1_10595 ... 601 1e-169 gi|336115926|ref|YP_004570692.1| hypothetical protein MLP_02750 ... 599 5e-169 gi|220912637|ref|YP_002487946.1| hypothetical protein Achl_1882 ... 599 5e-169 gi|325963241|ref|YP_004241147.1| hypothetical protein Asphe3_185... 598 9e-169 gi|258654683|ref|YP_003203839.1| hypothetical protein Namu_4571 ... 592 4e-167 gi|336320339|ref|YP_004600307.1| hypothetical protein Celgi_1220... 585 1e-164 gi|326330358|ref|ZP_08196668.1| hypothetical protein NBCG_01793 ... 583 4e-164 gi|323358427|ref|YP_004224823.1| hypothetical protein MTES_1979 ... 582 6e-164 >gi|15609548|ref|NP_216927.1| hypothetical protein Rv2411c [Mycobacterium tuberculosis H37Rv] gi|15841929|ref|NP_336966.1| hypothetical protein MT2484 [Mycobacterium tuberculosis CDC1551] gi|31793590|ref|NP_856083.1| hypothetical protein Mb2434c [Mycobacterium bovis AF2122/97] 75 more sequence titles Length=551 Score = 1125 bits (2909), Expect = 0.0, Method: Compositional matrix adjust. Identities = 551/551 (100%), Positives = 551/551 (100%), Gaps = 0/551 (0%) Query 1 MRRVSLPNQLNETRRRSPTRGERIFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELA 60 MRRVSLPNQLNETRRRSPTRGERIFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELA Sbjct 1 MRRVSLPNQLNETRRRSPTRGERIFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELA 60 Query 61 PSDASELKARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVK 120 PSDASELKARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVK Sbjct 61 PSDASELKARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVK 120 Query 121 ALECYLDDIYGDQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRG 180 ALECYLDDIYGDQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRG Sbjct 121 ALECYLDDIYGDQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRG 180 Query 181 DFRVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNE 240 DFRVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNE Sbjct 181 DFRVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNE 240 Query 241 ADPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYR 300 ADPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYR Sbjct 241 ADPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYR 300 Query 301 RIDDAFLDPLQFRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYL 360 RIDDAFLDPLQFRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYL Sbjct 301 RIDDAFLDPLQFRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYL 360 Query 361 HEKPLLANVETLRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQK 420 HEKPLLANVETLRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQK Sbjct 361 HEKPLLANVETLRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQK 420 Query 421 IRDDPRSWIAQPMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEG 480 IRDDPRSWIAQPMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEG Sbjct 421 IRDDPRSWIAQPMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEG 480 Query 481 SRVVNSSQGGGSKDTWVLAPRASAAARELGAAQIVRSLPQPLCDPTVDASGYEPHDQQPQ 540 SRVVNSSQGGGSKDTWVLAPRASAAARELGAAQIVRSLPQPLCDPTVDASGYEPHDQQPQ Sbjct 481 SRVVNSSQGGGSKDTWVLAPRASAAARELGAAQIVRSLPQPLCDPTVDASGYEPHDQQPQ 540 Query 541 QQQQQQQQAFH 551 QQQQQQQQAFH Sbjct 541 QQQQQQQQAFH 551 >gi|289754518|ref|ZP_06513896.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289695105|gb|EFD62534.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|339295308|gb|AEJ47419.1| hypothetical protein CCDC5079_2229 [Mycobacterium tuberculosis CCDC5079] gi|339298927|gb|AEJ51037.1| hypothetical protein CCDC5180_2200 [Mycobacterium tuberculosis CCDC5180] Length=548 Score = 1117 bits (2888), Expect = 0.0, Method: Compositional matrix adjust. Identities = 547/548 (99%), Positives = 548/548 (100%), Gaps = 0/548 (0%) Query 4 VSLPNQLNETRRRSPTRGERIFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELAPSD 63 +SLPNQLNETRRRSPTRGERIFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELAPSD Sbjct 1 MSLPNQLNETRRRSPTRGERIFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELAPSD 60 Query 64 ASELKARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALE 123 ASELKARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALE Sbjct 61 ASELKARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALE 120 Query 124 CYLDDIYGDQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFR 183 CYLDDIYGDQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFR Sbjct 121 CYLDDIYGDQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFR 180 Query 184 VLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADP 243 VLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADP Sbjct 181 VLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADP 240 Query 244 TVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRID 303 TVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRID Sbjct 241 TVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRID 300 Query 304 DAFLDPLQFRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEK 363 DAFLDPLQFRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEK Sbjct 301 DAFLDPLQFRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEK 360 Query 364 PLLANVETLRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRD 423 PLLANVETLRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRD Sbjct 361 PLLANVETLRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRD 420 Query 424 DPRSWIAQPMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRV 483 DPRSWIAQPMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRV Sbjct 421 DPRSWIAQPMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRV 480 Query 484 VNSSQGGGSKDTWVLAPRASAAARELGAAQIVRSLPQPLCDPTVDASGYEPHDQQPQQQQ 543 VNSSQGGGSKDTWVLAPRASAAARELGAAQIVRSLPQPLCDPTVDASGYEPHDQQPQQQQ Sbjct 481 VNSSQGGGSKDTWVLAPRASAAARELGAAQIVRSLPQPLCDPTVDASGYEPHDQQPQQQQ 540 Query 544 QQQQQAFH 551 QQQQQAFH Sbjct 541 QQQQQAFH 548 >gi|294994481|ref|ZP_06800172.1| hypothetical protein Mtub2_08193 [Mycobacterium tuberculosis 210] Length=624 Score = 1108 bits (2865), Expect = 0.0, Method: Compositional matrix adjust. Identities = 544/546 (99%), Positives = 545/546 (99%), Gaps = 0/546 (0%) Query 4 VSLPNQLNETRRRSPTRGERIFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELAPSD 63 +SLPNQLNETRRRSPTRGERIFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELAPSD Sbjct 1 MSLPNQLNETRRRSPTRGERIFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELAPSD 60 Query 64 ASELKARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALE 123 ASELKARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALE Sbjct 61 ASELKARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALE 120 Query 124 CYLDDIYGDQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFR 183 CYLDDIYGDQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFR Sbjct 121 CYLDDIYGDQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFR 180 Query 184 VLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADP 243 VLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADP Sbjct 181 VLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADP 240 Query 244 TVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRID 303 TVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRID Sbjct 241 TVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRID 300 Query 304 DAFLDPLQFRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEK 363 DAFLDPLQFRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEK Sbjct 301 DAFLDPLQFRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEK 360 Query 364 PLLANVETLRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRD 423 PLLANVETLRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRD Sbjct 361 PLLANVETLRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRD 420 Query 424 DPRSWIAQPMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRV 483 DPRSWIAQPMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRV Sbjct 421 DPRSWIAQPMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRV 480 Query 484 VNSSQGGGSKDTWVLAPRASAAARELGAAQIVRSLPQPLCDPTVDASGYEPHDQQPQQQQ 543 VNSSQGGGSKDTWVLAPRASAAARELGAAQIVRSLPQPLCDPTVDASGYEPHDQQPQQQQ Sbjct 481 VNSSQGGGSKDTWVLAPRASAAARELGAAQIVRSLPQPLCDPTVDASGYEPHDQQPQQQQ 540 Query 544 QQQQQA 549 QQQQQ Sbjct 541 QQQQQG 546 >gi|340627422|ref|YP_004745874.1| hypothetical protein MCAN_24451 [Mycobacterium canettii CIPT 140010059] gi|340005612|emb|CCC44776.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=550 Score = 1087 bits (2812), Expect = 0.0, Method: Compositional matrix adjust. Identities = 548/551 (99%), Positives = 548/551 (99%), Gaps = 1/551 (0%) Query 1 MRRVSLPNQLNETRRRSPTRGERIFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELA 60 MRRVSLPNQLNETRRRSPTRGERIFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELA Sbjct 1 MRRVSLPNQLNETRRRSPTRGERIFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELA 60 Query 61 PSDASELKARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVK 120 PSDASELKARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVK Sbjct 61 PSDASELKARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVK 120 Query 121 ALECYLDDIYGDQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRG 180 ALECYLDDIYGDQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRD RG Sbjct 121 ALECYLDDIYGDQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDDRG 180 Query 181 DFRVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNE 240 DFRVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNE Sbjct 181 DFRVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNE 240 Query 241 ADPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYR 300 ADPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYR Sbjct 241 ADPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYR 300 Query 301 RIDDAFLDPLQFRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYL 360 RIDDAFLDPLQFRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYL Sbjct 301 RIDDAFLDPLQFRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYL 360 Query 361 HEKPLLANVETLRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQK 420 HEKPLLANVETLRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQK Sbjct 361 HEKPLLANVETLRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQK 420 Query 421 IRDDPRSWIAQPMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEG 480 IRDDPRSWIAQPMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEG Sbjct 421 IRDDPRSWIAQPMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEG 480 Query 481 SRVVNSSQGGGSKDTWVLAPRASAAARELGAAQIVRSLPQPLCDPTVDASGYEPHDQQPQ 540 SRVVNSSQGGGSKDTWVLAPRASAAARELGAAQIVRSLPQPLCDPTVDASGYEPHDQQ Sbjct 481 SRVVNSSQGGGSKDTWVLAPRASAAARELGAAQIVRSLPQPLCDPTVDASGYEPHDQQ-P 539 Query 541 QQQQQQQQAFH 551 QQQQQQQQAFH Sbjct 540 QQQQQQQQAFH 550 >gi|15827247|ref|NP_301510.1| hypothetical protein ML0605 [Mycobacterium leprae TN] gi|221229725|ref|YP_002503141.1| hypothetical protein MLBr_00605 [Mycobacterium leprae Br4923] gi|8039819|sp|Q49755.2|Y605_MYCLE RecName: Full=Uncharacterized protein ML0605 gi|2398688|emb|CAB16148.1| hypothetical protein MLCL536.05c [Mycobacterium leprae] gi|13092796|emb|CAC30113.1| conserved hypothetical protein [Mycobacterium leprae] gi|219932832|emb|CAR70698.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length=561 Score = 960 bits (2481), Expect = 0.0, Method: Compositional matrix adjust. Identities = 475/536 (89%), Positives = 499/536 (94%), Gaps = 6/536 (1%) Query 1 MRRVSLPNQLNET------RRRSPTRGERIFGGYNTSDVYAMAFDEMFDAQGIVRGPYKG 54 M +VSLP+QL ET R RS R ERIFGGYNTSD+Y+MAFDEMFD QG VRGPYKG Sbjct 1 MSQVSLPSQLKETGPRLQSRCRSSARSERIFGGYNTSDIYSMAFDEMFDVQGNVRGPYKG 60 Query 55 IYAELAPSDASELKARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERG 114 IYAELAPSDASELKARA+AL RAFIDQGITFSLSGQERPFPLDLVPRVISA EW+RLERG Sbjct 61 IYAELAPSDASELKARAEALARAFIDQGITFSLSGQERPFPLDLVPRVISASEWSRLERG 120 Query 115 ITQRVKALECYLDDIYGDQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDL 174 ITQRVKALE YLDDIYGDQEILRDGVIPRRL+TSCEHFHRQAVGI+PPNGVRIHVAGIDL Sbjct 121 ITQRVKALEMYLDDIYGDQEILRDGVIPRRLITSCEHFHRQAVGIIPPNGVRIHVAGIDL 180 Query 175 IRDHRGDFRVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRN 234 IRD G+FRVLEDNLRSPSGVSYVMENRRT+ARVFPNLFATHRVRAVDDYASHLLRALRN Sbjct 181 IRDDSGNFRVLEDNLRSPSGVSYVMENRRTIARVFPNLFATHRVRAVDDYASHLLRALRN 240 Query 235 SAATNEADPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQ 294 SAATNEADPTVVVLTPGV N+AYFEHSLLARQMGVELVEGRDLFCRDNQVYM TTEGERQ Sbjct 241 SAATNEADPTVVVLTPGVANAAYFEHSLLARQMGVELVEGRDLFCRDNQVYMCTTEGERQ 300 Query 295 VDVIYRRIDDAFLDPLQFRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPT 354 VDVIYRRIDDAFLDPLQFRADSVLGVAGLVNAARAGNVV+SSAIGNGVGDDKLVYTYVPT Sbjct 301 VDVIYRRIDDAFLDPLQFRADSVLGVAGLVNAARAGNVVISSAIGNGVGDDKLVYTYVPT 360 Query 355 MIEYYLHEKPLLANVETLRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAEL 414 M+EYYL EKPLLANV+TLRCWLDDER+EVLDRI +LVLKPVEGSGGYGIVFGP+AS+ EL Sbjct 361 MMEYYLREKPLLANVDTLRCWLDDERQEVLDRIHDLVLKPVEGSGGYGIVFGPDASEKEL 420 Query 415 AAVSQKIRDDPRSWIAQPMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTR 474 AA S+KIRDDPRSWIAQP+MELSTVPT++ TLAPRYVDLRPFAVNDGN+VWVLPGGLTR Sbjct 421 AAASKKIRDDPRSWIAQPVMELSTVPTQVGSTLAPRYVDLRPFAVNDGNDVWVLPGGLTR 480 Query 475 VALVEGSRVVNSSQGGGSKDTWVLAPRASAAARELGAAQIVRSLPQPLCDPTVDAS 530 VALVEGSRVVNSSQGGGSKDTWVLAP AS ARELGAA+IV SLPQ DP D S Sbjct 481 VALVEGSRVVNSSQGGGSKDTWVLAPHASYGARELGAAEIVCSLPQSSPDPVPDGS 536 >gi|466974|gb|AAA17160.1| u1937b [Mycobacterium leprae] Length=558 Score = 956 bits (2472), Expect = 0.0, Method: Compositional matrix adjust. Identities = 473/533 (89%), Positives = 497/533 (94%), Gaps = 6/533 (1%) Query 4 VSLPNQLNET------RRRSPTRGERIFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYA 57 +SLP+QL ET R RS R ERIFGGYNTSD+Y+MAFDEMFD QG VRGPYKGIYA Sbjct 1 MSLPSQLKETGPRLQSRCRSSARSERIFGGYNTSDIYSMAFDEMFDVQGNVRGPYKGIYA 60 Query 58 ELAPSDASELKARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQ 117 ELAPSDASELKARA+AL RAFIDQGITFSLSGQERPFPLDLVPRVISA EW+RLERGITQ Sbjct 61 ELAPSDASELKARAEALARAFIDQGITFSLSGQERPFPLDLVPRVISASEWSRLERGITQ 120 Query 118 RVKALECYLDDIYGDQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRD 177 RVKALE YLDDIYGDQEILRDGVIPRRL+TSCEHFHRQAVGI+PPNGVRIHVAGIDLIRD Sbjct 121 RVKALEMYLDDIYGDQEILRDGVIPRRLITSCEHFHRQAVGIIPPNGVRIHVAGIDLIRD 180 Query 178 HRGDFRVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAA 237 G+FRVLEDNLRSPSGVSYVMENRRT+ARVFPNLFATHRVRAVDDYASHLLRALRNSAA Sbjct 181 DSGNFRVLEDNLRSPSGVSYVMENRRTIARVFPNLFATHRVRAVDDYASHLLRALRNSAA 240 Query 238 TNEADPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDV 297 TNEADPTVVVLTPGV N+AYFEHSLLARQMGVELVEGRDLFCRDNQVYM TTEGERQVDV Sbjct 241 TNEADPTVVVLTPGVANAAYFEHSLLARQMGVELVEGRDLFCRDNQVYMCTTEGERQVDV 300 Query 298 IYRRIDDAFLDPLQFRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIE 357 IYRRIDDAFLDPLQFRADSVLGVAGLVNAARAGNVV+SSAIGNGVGDDKLVYTYVPTM+E Sbjct 301 IYRRIDDAFLDPLQFRADSVLGVAGLVNAARAGNVVISSAIGNGVGDDKLVYTYVPTMME 360 Query 358 YYLHEKPLLANVETLRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAV 417 YYL EKPLLANV+TLRCWLDDER+EVLDRI +LVLKPVEGSGGYGIVFGP+AS+ ELAA Sbjct 361 YYLREKPLLANVDTLRCWLDDERQEVLDRIHDLVLKPVEGSGGYGIVFGPDASEKELAAA 420 Query 418 SQKIRDDPRSWIAQPMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVAL 477 S+KIRDDPRSWIAQP+MELSTVPT++ TLAPRYVDLRPFAVNDGN+VWVLPGGLTRVAL Sbjct 421 SKKIRDDPRSWIAQPVMELSTVPTQVGSTLAPRYVDLRPFAVNDGNDVWVLPGGLTRVAL 480 Query 478 VEGSRVVNSSQGGGSKDTWVLAPRASAAARELGAAQIVRSLPQPLCDPTVDAS 530 VEGSRVVNSSQGGGSKDTWVLAP AS ARELGAA+IV SLPQ DP D S Sbjct 481 VEGSRVVNSSQGGGSKDTWVLAPHASYGARELGAAEIVCSLPQSSPDPVPDGS 533 >gi|183983712|ref|YP_001852003.1| hypothetical protein MMAR_3732 [Mycobacterium marinum M] gi|183177038|gb|ACC42148.1| conserved hypothetical protein [Mycobacterium marinum M] Length=557 Score = 954 bits (2466), Expect = 0.0, Method: Compositional matrix adjust. Identities = 467/528 (89%), Positives = 495/528 (94%), Gaps = 0/528 (0%) Query 1 MRRVSLPNQLNETRRRSPTRGERIFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELA 60 M +VSL + +RRRS R ERIFGGYN+SDVY+ AFDEMFDAQG VRGPYKGIYAELA Sbjct 1 MNQVSLTEPMQASRRRSQARPERIFGGYNSSDVYSQAFDEMFDAQGNVRGPYKGIYAELA 60 Query 61 PSDASELKARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVK 120 PSDASELKARADAL RAF+DQGITFSLSGQERPFPLDLVPRVISA EW+RLERGI QRVK Sbjct 61 PSDASELKARADALDRAFLDQGITFSLSGQERPFPLDLVPRVISAAEWSRLERGIIQRVK 120 Query 121 ALECYLDDIYGDQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRG 180 ALE YLDDIYGDQEILRDGVIPRRL+TSCEHFHR+AVGI+PPNGVRIHVAGIDLIRD RG Sbjct 121 ALEMYLDDIYGDQEILRDGVIPRRLITSCEHFHREAVGIIPPNGVRIHVAGIDLIRDERG 180 Query 181 DFRVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNE 240 DFRVLEDNLRSPSGVSYV+ENRRTMARVFPNLFATHRVRAVDDY SHLLRALRNSAATNE Sbjct 181 DFRVLEDNLRSPSGVSYVIENRRTMARVFPNLFATHRVRAVDDYPSHLLRALRNSAATNE 240 Query 241 ADPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYR 300 ADPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGE QVDVIYR Sbjct 241 ADPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGECQVDVIYR 300 Query 301 RIDDAFLDPLQFRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYL 360 RIDDAFLDPLQFRADSVLGVAGLVNAARAGNVV+SS+IGNGVGDDKLVYTYVPTMIEYYL Sbjct 301 RIDDAFLDPLQFRADSVLGVAGLVNAARAGNVVISSSIGNGVGDDKLVYTYVPTMIEYYL 360 Query 361 HEKPLLANVETLRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQK 420 EKPLLANV+T RCWLD+EREEVLDR++ELVLKPVEGSGGYGIVFGP+AS ELAAV +K Sbjct 361 REKPLLANVDTYRCWLDEEREEVLDRLKELVLKPVEGSGGYGIVFGPDASDKELAAVGKK 420 Query 421 IRDDPRSWIAQPMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEG 480 IRDDPRSWIAQPMMELSTVPTRIE +LAPRYVDLRPFAVNDGN+VWVLPGGLTRVA VEG Sbjct 421 IRDDPRSWIAQPMMELSTVPTRIEDSLAPRYVDLRPFAVNDGNDVWVLPGGLTRVAQVEG 480 Query 481 SRVVNSSQGGGSKDTWVLAPRASAAARELGAAQIVRSLPQPLCDPTVD 528 SRVVNSSQGGGSKDTWVLAPR+ A RELG AQ++RSLP+ + + + D Sbjct 481 SRVVNSSQGGGSKDTWVLAPRSLATGRELGGAQVLRSLPRTVPEQSPD 528 >gi|41408321|ref|NP_961157.1| hypothetical protein MAP2223c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396677|gb|AAS04540.1| hypothetical protein MAP_2223c [Mycobacterium avium subsp. paratuberculosis K-10] Length=558 Score = 951 bits (2459), Expect = 0.0, Method: Compositional matrix adjust. Identities = 473/527 (90%), Positives = 490/527 (93%), Gaps = 2/527 (0%) Query 4 VSLPNQLNETRRR-SPTRGERIFGGYNT-SDVYAMAFDEMFDAQGIVRGPYKGIYAELAP 61 +SL NQL +T R R ERIFGGYN SD Y MAFDEMFDA G VRGPYKGIYAELAP Sbjct 1 MSLSNQLEDTGRGFRAARSERIFGGYNVASDAYDMAFDEMFDAAGAVRGPYKGIYAELAP 60 Query 62 SDASELKARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKA 121 SDASELKARA+AL RAF+DQGITFSLSGQERPFPLDLVPRVISA EW RLERGITQRVKA Sbjct 61 SDASELKARAEALSRAFLDQGITFSLSGQERPFPLDLVPRVISAAEWARLERGITQRVKA 120 Query 122 LECYLDDIYGDQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGD 181 LE YLDDIYGDQEIL DGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRD G+ Sbjct 121 LEMYLDDIYGDQEILNDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDEEGN 180 Query 182 FRVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEA 241 FRVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYA+HLLRALRNSAATNEA Sbjct 181 FRVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYAAHLLRALRNSAATNEA 240 Query 242 DPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRR 301 DPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRR Sbjct 241 DPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRR 300 Query 302 IDDAFLDPLQFRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLH 361 IDDAFLDPLQFRADSVLGVAGLVNAARAGNVV+SSAIGNGVGDDKLVYTYVPTMIEYYL Sbjct 301 IDDAFLDPLQFRADSVLGVAGLVNAARAGNVVISSAIGNGVGDDKLVYTYVPTMIEYYLG 360 Query 362 EKPLLANVETLRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKI 421 EKPLLANVETLRCWLDDEREEVLDRI ELVLKPVEGSGGYGIVFGPEAS ELAAV++KI Sbjct 361 EKPLLANVETLRCWLDDEREEVLDRIDELVLKPVEGSGGYGIVFGPEASDKELAAVAKKI 420 Query 422 RDDPRSWIAQPMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGS 481 RDDPRSWIAQPMMELSTVPT++ +LAPRYVDLRPFAVNDG +VWVLPGGLTRVALVEGS Sbjct 421 RDDPRSWIAQPMMELSTVPTQVGSSLAPRYVDLRPFAVNDGEDVWVLPGGLTRVALVEGS 480 Query 482 RVVNSSQGGGSKDTWVLAPRASAAARELGAAQIVRSLPQPLCDPTVD 528 RVVNSSQGGGSKDTWVLA RAS+ ELGAA++VRSLP + DP VD Sbjct 481 RVVNSSQGGGSKDTWVLASRASSGDHELGAAEVVRSLPTAMPDPLVD 527 >gi|240170817|ref|ZP_04749476.1| hypothetical protein MkanA1_15997 [Mycobacterium kansasii ATCC 12478] Length=544 Score = 951 bits (2457), Expect = 0.0, Method: Compositional matrix adjust. Identities = 481/545 (89%), Positives = 508/545 (94%), Gaps = 5/545 (0%) Query 1 MRRVSLPNQLNETRRRSPTRGERIFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELA 60 M RVSL + + TRRRS R ERIF GY+ SD YA+AFDEMFDAQG VRGPYKGIYAELA Sbjct 1 MTRVSLSDPIEATRRRSSARSERIFDGYHKSDGYALAFDEMFDAQGNVRGPYKGIYAELA 60 Query 61 PSDASELKARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVK 120 P+DASELKARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISA EWTRLERGI QRV+ Sbjct 61 PTDASELKARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAAEWTRLERGIIQRVQ 120 Query 121 ALECYLDDIYGDQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRG 180 ALE YLDDIYGDQEILRDGVIPRRLVTSCEHFHR+AVGIVPPNGVRIHVAGIDLIRD RG Sbjct 121 ALERYLDDIYGDQEILRDGVIPRRLVTSCEHFHREAVGIVPPNGVRIHVAGIDLIRDDRG 180 Query 181 DFRVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNE 240 DFRVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDY +HLLRALRNSAATNE Sbjct 181 DFRVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYPAHLLRALRNSAATNE 240 Query 241 ADPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYR 300 ADPTVVVLTPGVYN AYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYR Sbjct 241 ADPTVVVLTPGVYNPAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYR 300 Query 301 RIDDAFLDPLQFRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYL 360 RIDDA+LDPLQFRADSVLGVAGLVNAARAGNVV+SS+IGNGVGDDKLVYTYVP MIEYYL Sbjct 301 RIDDAYLDPLQFRADSVLGVAGLVNAARAGNVVISSSIGNGVGDDKLVYTYVPAMIEYYL 360 Query 361 HEKPLLANVETLRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQK 420 EKPLLANVET RCWL+DEREEVLDRI ELVLKPVEGSGGYGIVFGP+AS+ ELAAV +K Sbjct 361 REKPLLANVETYRCWLEDEREEVLDRIGELVLKPVEGSGGYGIVFGPQASEKELAAVGKK 420 Query 421 IRDDPRSWIAQPMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEG 480 IRD+PRSWIAQPMMELSTVPTRIEG+LAPRYVDLRPFAVNDGN++WVLPGGLTRVALVEG Sbjct 421 IRDNPRSWIAQPMMELSTVPTRIEGSLAPRYVDLRPFAVNDGNDIWVLPGGLTRVALVEG 480 Query 481 SRVVNSSQGGGSKDTWVLAPRASAAARELGAAQIVRSLPQPLCD-PTVDASGYEPHDQQP 539 SRVVNSSQGGGSKDTWVLAPRASAA RELG AQ+VRSLP+ + + P D+ P ++Q Sbjct 481 SRVVNSSQGGGSKDTWVLAPRASAADRELGRAQVVRSLPRVVPEQPPTDS----PRNEQS 536 Query 540 QQQQQ 544 QQQQ+ Sbjct 537 QQQQK 541 >gi|254774589|ref|ZP_05216105.1| hypothetical protein MaviaA2_07958 [Mycobacterium avium subsp. avium ATCC 25291] Length=558 Score = 950 bits (2455), Expect = 0.0, Method: Compositional matrix adjust. Identities = 472/527 (90%), Positives = 490/527 (93%), Gaps = 2/527 (0%) Query 4 VSLPNQLNETRRR-SPTRGERIFGGYNT-SDVYAMAFDEMFDAQGIVRGPYKGIYAELAP 61 +SL NQL +T R R ERIFGGYN SD Y MAFDEMFDA G VRGPYKGIYAELAP Sbjct 1 MSLSNQLEDTGRGFRAARSERIFGGYNVASDAYDMAFDEMFDAAGAVRGPYKGIYAELAP 60 Query 62 SDASELKARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKA 121 SDASELKARA+AL RAF+DQGITFSLSGQERPFPLDLVPRVISA EW RLERGITQRVKA Sbjct 61 SDASELKARAEALSRAFLDQGITFSLSGQERPFPLDLVPRVISAAEWARLERGITQRVKA 120 Query 122 LECYLDDIYGDQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGD 181 LE YLDDI GDQEIL DGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRD +G+ Sbjct 121 LEMYLDDIDGDQEILNDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDEKGN 180 Query 182 FRVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEA 241 FRVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYA+HLLRALRNSAATNEA Sbjct 181 FRVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYAAHLLRALRNSAATNEA 240 Query 242 DPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRR 301 DPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRR Sbjct 241 DPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRR 300 Query 302 IDDAFLDPLQFRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLH 361 IDDAFLDPLQFRADSVLGVAGLVNAARAGNVV+SSAIGNGVGDDKLVYTYVPTMIEYYL Sbjct 301 IDDAFLDPLQFRADSVLGVAGLVNAARAGNVVISSAIGNGVGDDKLVYTYVPTMIEYYLG 360 Query 362 EKPLLANVETLRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKI 421 EKPLLANVETLRCWLDDEREEVLDRI ELVLKPVEGSGGYGIVFGPEAS ELAAV++KI Sbjct 361 EKPLLANVETLRCWLDDEREEVLDRIDELVLKPVEGSGGYGIVFGPEASDKELAAVAKKI 420 Query 422 RDDPRSWIAQPMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGS 481 RDDPRSWIAQPMMELSTVPT++ +LAPRYVDLRPFAVNDG +VWVLPGGLTRVALVEGS Sbjct 421 RDDPRSWIAQPMMELSTVPTQVGSSLAPRYVDLRPFAVNDGEDVWVLPGGLTRVALVEGS 480 Query 482 RVVNSSQGGGSKDTWVLAPRASAAARELGAAQIVRSLPQPLCDPTVD 528 RVVNSSQGGGSKDTWVLA RAS+ ELGAA++VRSLP + DP VD Sbjct 481 RVVNSSQGGGSKDTWVLASRASSGDHELGAAEVVRSLPTAMPDPLVD 527 >gi|296170533|ref|ZP_06852117.1| UDP-N-acetylmuramate dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894765|gb|EFG74490.1| UDP-N-acetylmuramate dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=558 Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust. Identities = 471/545 (87%), Positives = 497/545 (92%), Gaps = 6/545 (1%) Query 4 VSLPNQLNETRR-RSPTRGERIFGGYNTS-DVYAMAFDEMFDAQGIVRGPYKGIYAELAP 61 +SLP+QL + R R ERIFGGYN S D+Y+ AFDEMFDAQG VRGPYKGIYAELAP Sbjct 1 MSLPSQLEDRGRGLRAARAERIFGGYNASPDLYSAAFDEMFDAQGAVRGPYKGIYAELAP 60 Query 62 SDASELKARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKA 121 SDASELKARA+ALGRAFIDQGITFSLSGQERPFPLDLVPRVISA EW+RLERGI QRVKA Sbjct 61 SDASELKARAEALGRAFIDQGITFSLSGQERPFPLDLVPRVISAAEWSRLERGIIQRVKA 120 Query 122 LECYLDDIYGDQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGD 181 LE YLDDIYGDQEIL D +IPRRLVTSCEHFHRQA+GIVPPNGVRIHVAGIDLIRD +G+ Sbjct 121 LEMYLDDIYGDQEILSDDIIPRRLVTSCEHFHRQAMGIVPPNGVRIHVAGIDLIRDEKGN 180 Query 182 FRVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEA 241 FRVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEA Sbjct 181 FRVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEA 240 Query 242 DPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRR 301 DPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTT+GE QVDVIYRR Sbjct 241 DPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTDGEVQVDVIYRR 300 Query 302 IDDAFLDPLQFRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLH 361 IDDAFLDPLQFRADSVLGVAGLVNAARAGNVV+SSAIGNGVGDDKLVYTYVPTMIEYYL Sbjct 301 IDDAFLDPLQFRADSVLGVAGLVNAARAGNVVISSAIGNGVGDDKLVYTYVPTMIEYYLG 360 Query 362 EKPLLANVETLRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKI 421 EKPLLANVET RCWLDDEREEVLDRI ELVLKPVEGSGGYGIVFGPEAS ELA V++K+ Sbjct 361 EKPLLANVETYRCWLDDEREEVLDRIDELVLKPVEGSGGYGIVFGPEASDKELATVAKKV 420 Query 422 RDDPRSWIAQPMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGS 481 RDDPRSWIAQPMMELSTVPT+I TLAPRYVDLRPFAVNDG++VWVLPGGLTRVALVEGS Sbjct 421 RDDPRSWIAQPMMELSTVPTQIGNTLAPRYVDLRPFAVNDGDDVWVLPGGLTRVALVEGS 480 Query 482 RVVNSSQGGGSKDTWVLA-PRASAAARELGAAQIVRSLPQPLCDPTVDASGYEPHDQQPQ 540 RVVNSSQGGGSKDTWVLA R SA ELGAA++VRSLP+ + DP D + P Q Q Sbjct 481 RVVNSSQGGGSKDTWVLASSRTSADEHELGAAEVVRSLPESMPDPASDGA---PRRTQTQ 537 Query 541 QQQQQ 545 Q ++ Sbjct 538 SQTRE 542 >gi|118618943|ref|YP_907275.1| hypothetical protein MUL_3675 [Mycobacterium ulcerans Agy99] gi|118571053|gb|ABL05804.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=557 Score = 941 bits (2432), Expect = 0.0, Method: Compositional matrix adjust. Identities = 461/528 (88%), Positives = 492/528 (94%), Gaps = 0/528 (0%) Query 1 MRRVSLPNQLNETRRRSPTRGERIFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELA 60 M +VSL + +RRRS R ERIFGGYN+SDVY+ AFDEMFDAQG VRGPYKGIYAELA Sbjct 1 MNQVSLTEPMQASRRRSQARPERIFGGYNSSDVYSQAFDEMFDAQGNVRGPYKGIYAELA 60 Query 61 PSDASELKARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVK 120 PSDASELKARADAL RAF+DQGITFSLSGQERPFPLDLVPRVISA EW+RLERGI QRVK Sbjct 61 PSDASELKARADALDRAFLDQGITFSLSGQERPFPLDLVPRVISAAEWSRLERGIIQRVK 120 Query 121 ALECYLDDIYGDQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRG 180 ALE YLDDIYGDQEILRDGVIPRRL+TSCEHFHR+A+GI+ PNGVRIHVAGIDLIR+ G Sbjct 121 ALEMYLDDIYGDQEILRDGVIPRRLITSCEHFHREAMGIITPNGVRIHVAGIDLIRNECG 180 Query 181 DFRVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNE 240 DFRVLEDNLRSPSGVSYV+ENRRTMARVFPNLFATHRVRAVDDY SHLLRALRNSAATNE Sbjct 181 DFRVLEDNLRSPSGVSYVIENRRTMARVFPNLFATHRVRAVDDYPSHLLRALRNSAATNE 240 Query 241 ADPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYR 300 ADPTVVVLTPGVYNSA+FEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGE QVDVIYR Sbjct 241 ADPTVVVLTPGVYNSAHFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGECQVDVIYR 300 Query 301 RIDDAFLDPLQFRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYL 360 RIDDAFLDPLQFRADSVLGVAGLVNAARAGNVV+SS+IGNGVGDDKLVYTYVPTMIEYYL Sbjct 301 RIDDAFLDPLQFRADSVLGVAGLVNAARAGNVVISSSIGNGVGDDKLVYTYVPTMIEYYL 360 Query 361 HEKPLLANVETLRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQK 420 EKPLLANV+T RCWLD+EREEVLDR++ELVLKPVEGSGGYGIVFGP+AS ELAAV +K Sbjct 361 REKPLLANVDTYRCWLDEEREEVLDRLKELVLKPVEGSGGYGIVFGPDASDKELAAVGKK 420 Query 421 IRDDPRSWIAQPMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEG 480 IRDDPRSWIAQPMMELSTVPTRIE +LAPRYVDLRPFAVNDGN+VWVLPGGLTRVA VEG Sbjct 421 IRDDPRSWIAQPMMELSTVPTRIEDSLAPRYVDLRPFAVNDGNDVWVLPGGLTRVAQVEG 480 Query 481 SRVVNSSQGGGSKDTWVLAPRASAAARELGAAQIVRSLPQPLCDPTVD 528 SRVVNSSQGGGSK TWVLAPR+ A RELG AQ++RSLP+ + + + D Sbjct 481 SRVVNSSQGGGSKATWVLAPRSLATGRELGGAQVLRSLPRTVPEQSPD 528 >gi|336458242|gb|EGO37223.1| hypothetical protein MAPs_15370 [Mycobacterium avium subsp. paratuberculosis S397] Length=531 Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust. Identities = 457/499 (92%), Positives = 473/499 (95%), Gaps = 0/499 (0%) Query 30 TSDVYAMAFDEMFDAQGIVRGPYKGIYAELAPSDASELKARADALGRAFIDQGITFSLSG 89 SD Y MAFDEMFDA G VRGPYKGIYAELAPSDASELKARA+AL RAF+DQGITFSLSG Sbjct 2 ASDAYDMAFDEMFDAAGAVRGPYKGIYAELAPSDASELKARAEALSRAFLDQGITFSLSG 61 Query 90 QERPFPLDLVPRVISAPEWTRLERGITQRVKALECYLDDIYGDQEILRDGVIPRRLVTSC 149 QERPFPLDLVPRVISA EW RLERGITQRVKALE YLDDIYGDQEIL DGVIPRRLVTSC Sbjct 62 QERPFPLDLVPRVISAAEWARLERGITQRVKALEMYLDDIYGDQEILNDGVIPRRLVTSC 121 Query 150 EHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLEDNLRSPSGVSYVMENRRTMARVF 209 EHFHRQAVGIVPPNGVRIHVAGIDLIRD +G+FRVLEDNLRSPSGVSYVMENRRTMARVF Sbjct 122 EHFHRQAVGIVPPNGVRIHVAGIDLIRDEKGNFRVLEDNLRSPSGVSYVMENRRTMARVF 181 Query 210 PNLFATHRVRAVDDYASHLLRALRNSAATNEADPTVVVLTPGVYNSAYFEHSLLARQMGV 269 PNLFATHRVRAVDDYA+HLLRALRNSAATNEADPTVVVLTPGVYNSAYFEHSLLARQMGV Sbjct 182 PNLFATHRVRAVDDYAAHLLRALRNSAATNEADPTVVVLTPGVYNSAYFEHSLLARQMGV 241 Query 270 ELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQFRADSVLGVAGLVNAARA 329 ELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQFRADSVLGVAGLVNAARA Sbjct 242 ELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQFRADSVLGVAGLVNAARA 301 Query 330 GNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLANVETLRCWLDDEREEVLDRIRE 389 GNVV+SSAIGNGVGDDKLVYTYVPTMIEYYL EKPLLANVETLRCWLDDEREEVLDRI E Sbjct 302 GNVVISSAIGNGVGDDKLVYTYVPTMIEYYLGEKPLLANVETLRCWLDDEREEVLDRIDE 361 Query 390 LVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRDDPRSWIAQPMMELSTVPTRIEGTLAP 449 LVLKPVEGSGGYGIVFGPEAS ELAAV++KIRDDPRSWIAQPMMELSTVPT++ +LAP Sbjct 362 LVLKPVEGSGGYGIVFGPEASDKELAAVAKKIRDDPRSWIAQPMMELSTVPTQVGSSLAP 421 Query 450 RYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRVVNSSQGGGSKDTWVLAPRASAAAREL 509 RYVDLRPFAVNDG +VWVLPGGLTRVALVEGSRVVNSSQGGGSKDTWVLA RAS+ EL Sbjct 422 RYVDLRPFAVNDGEDVWVLPGGLTRVALVEGSRVVNSSQGGGSKDTWVLASRASSGDHEL 481 Query 510 GAAQIVRSLPQPLCDPTVD 528 GAA++VRSLP + DP VD Sbjct 482 GAAEVVRSLPTAMPDPLVD 500 >gi|342857811|ref|ZP_08714467.1| hypothetical protein MCOL_03005 [Mycobacterium colombiense CECT 3035] gi|342135144|gb|EGT88310.1| hypothetical protein MCOL_03005 [Mycobacterium colombiense CECT 3035] Length=560 Score = 930 bits (2404), Expect = 0.0, Method: Compositional matrix adjust. Identities = 473/548 (87%), Positives = 500/548 (92%), Gaps = 3/548 (0%) Query 4 VSLPNQLNETRRR-SPTRGERIFGGYN-TSDVYAMAFDEMFDAQGIVRGPYKGIYAELAP 61 +SL NQL++++R R ERIFGGYN +SD Y MAFDEMFDAQG VRGPYKGIYAELAP Sbjct 1 MSLTNQLDDSKRGFRAARAERIFGGYNGSSDAYDMAFDEMFDAQGAVRGPYKGIYAELAP 60 Query 62 SDASELKARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKA 121 SDASELKARA+AL RAF+DQGITFSLSGQERPFPLDLVPRVISA EWTRLERGITQRVKA Sbjct 61 SDASELKARAEALSRAFLDQGITFSLSGQERPFPLDLVPRVISAAEWTRLERGITQRVKA 120 Query 122 LECYLDDIYGDQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGD 181 LE YLDD+YGDQEIL DGVIPRRLVTSCEHFHRQA+GIVPPNGVRIHVAGIDLIRD +G Sbjct 121 LEMYLDDVYGDQEILNDGVIPRRLVTSCEHFHRQAMGIVPPNGVRIHVAGIDLIRDEKGV 180 Query 182 FRVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEA 241 +RVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEA Sbjct 181 WRVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEA 240 Query 242 DPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRR 301 DPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRR Sbjct 241 DPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRR 300 Query 302 IDDAFLDPLQFRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLH 361 IDDAFLDPLQFRADS+LGVAGLVNAARAGNV +SSAIGNGVGDDKLVYTYVPTMIEYYL Sbjct 301 IDDAFLDPLQFRADSMLGVAGLVNAARAGNVSISSAIGNGVGDDKLVYTYVPTMIEYYLG 360 Query 362 EKPLLANVETLRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKI 421 EKPLLANVETLRCWLDDEREE LDRI ELV+KPVEGSGGYGIVFGPEAS ELAA ++KI Sbjct 361 EKPLLANVETLRCWLDDEREEALDRIDELVIKPVEGSGGYGIVFGPEASAKELAAAAKKI 420 Query 422 RDDPRSWIAQPMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGS 481 RDDPRSWIAQPMMELSTVPT+I TLAPRYVDLRPFAVNDGN+V+VLPGGLTRVALVEGS Sbjct 421 RDDPRSWIAQPMMELSTVPTQIGNTLAPRYVDLRPFAVNDGNDVFVLPGGLTRVALVEGS 480 Query 482 RVVNSSQGGGSKDTWVLAPRASAAARELGAAQIVRSLPQPLCDPTVDASGYEP-HDQQPQ 540 RVVNSSQGGGSKDTWVLA RAS ELGAA++VRSLP+ + DP D+ QQPQ Sbjct 481 RVVNSSQGGGSKDTWVLASRASGGEHELGAAEVVRSLPESMPDPLEDSPRLTSVTSQQPQ 540 Query 541 QQQQQQQQ 548 Q++ Sbjct 541 PTDHPQRE 548 >gi|254819868|ref|ZP_05224869.1| hypothetical protein MintA_08084 [Mycobacterium intracellulare ATCC 13950] Length=528 Score = 925 bits (2390), Expect = 0.0, Method: Compositional matrix adjust. Identities = 456/509 (90%), Positives = 477/509 (94%), Gaps = 1/509 (0%) Query 36 MAFDEMFDAQGIVRGPYKGIYAELAPSDASELKARADALGRAFIDQGITFSLSGQERPFP 95 MAFDEMFDAQG VRGPYKGIYAELAPSDASELKARA+AL RAF+DQGITFSLSGQERPFP Sbjct 1 MAFDEMFDAQGAVRGPYKGIYAELAPSDASELKARAEALSRAFLDQGITFSLSGQERPFP 60 Query 96 LDLVPRVISAPEWTRLERGITQRVKALECYLDDIYGDQEILRDGVIPRRLVTSCEHFHRQ 155 LDLVPRVISA EW RLERGITQRVKALE YLDDIYGDQEIL DGVIPRRLVTSCEHFHRQ Sbjct 61 LDLVPRVISAAEWARLERGITQRVKALEMYLDDIYGDQEILNDGVIPRRLVTSCEHFHRQ 120 Query 156 AVGIVPPNGVRIHVAGIDLIRDHRGDFRVLEDNLRSPSGVSYVMENRRTMARVFPNLFAT 215 A+GIVPPNGVRIHVAGIDLIRD +G+FRVLEDNLRSPSGVSYVMENRRTMARVFPNLFAT Sbjct 121 AMGIVPPNGVRIHVAGIDLIRDEKGNFRVLEDNLRSPSGVSYVMENRRTMARVFPNLFAT 180 Query 216 HRVRAVDDYASHLLRALRNSAATNEADPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGR 275 HRVR+VDDYASHLLRALRNSAATNEADPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGR Sbjct 181 HRVRSVDDYASHLLRALRNSAATNEADPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGR 240 Query 276 DLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQFRADSVLGVAGLVNAARAGNVVLS 335 D+FCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQFRADSVLGVAGLVNAARAGNVV+S Sbjct 241 DMFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQFRADSVLGVAGLVNAARAGNVVIS 300 Query 336 SAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLANVETLRCWLDDEREEVLDRIRELVLKPV 395 SAIGNGVGDDKLVYTYVPTMIEYYL EKPLLANVETLRCWLDDEREEVLDRI ELVLKPV Sbjct 301 SAIGNGVGDDKLVYTYVPTMIEYYLGEKPLLANVETLRCWLDDEREEVLDRIDELVLKPV 360 Query 396 EGSGGYGIVFGPEASQAELAAVSQKIRDDPRSWIAQPMMELSTVPTRIEGTLAPRYVDLR 455 EGSGGYGIVFGPEAS+ ELAAV++KIRDDPRSWIAQPMMELSTVPT++ LAPRYVDLR Sbjct 361 EGSGGYGIVFGPEASEKELAAVAKKIRDDPRSWIAQPMMELSTVPTQVGSALAPRYVDLR 420 Query 456 PFAVNDGNEVWVLPGGLTRVALVEGSRVVNSSQGGGSKDTWVLAPRASAAARELGAAQIV 515 PFAVNDGN+VWVLPGGLTR ALVEGSRVVNSSQGGGSKDTWVLA RASA EL AA++V Sbjct 421 PFAVNDGNDVWVLPGGLTRTALVEGSRVVNSSQGGGSKDTWVLASRASAGDHELEAAEVV 480 Query 516 RSLPQPLCDPTVDASGYEPHDQQPQQQQQ 544 R+LP + DP +D S QQPQ ++ Sbjct 481 RALPTSMPDPMLDDSP-RLASQQPQPTER 508 >gi|118467439|ref|YP_888839.1| hypothetical protein MSMEG_4570 [Mycobacterium smegmatis str. MC2 155] gi|118168726|gb|ABK69622.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=542 Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust. Identities = 431/520 (83%), Positives = 469/520 (91%), Gaps = 0/520 (0%) Query 11 NETRRRSPTRGERIFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELAPSDASELKAR 70 N T + + +F GYN YA AFDEMFDA G VRGPYKGI+AELAP+DASEL+AR Sbjct 11 NATGSSARVKQRGVFDGYNKLGHYAKAFDEMFDASGNVRGPYKGIFAELAPTDASELQAR 70 Query 71 ADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALECYLDDIY 130 ADALGRAF DQGITFSLSGQERPFPLDLVPRVISA EW+RLERGI QRVKALE YLDDIY Sbjct 71 ADALGRAFTDQGITFSLSGQERPFPLDLVPRVISAAEWSRLERGIRQRVKALEMYLDDIY 130 Query 131 GDQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLEDNLR 190 G+QEILRDGVIPRRLVTSCEHFHR+A GIVPPNGVRIHVAGIDLIRD +GDFRVLEDNLR Sbjct 131 GEQEILRDGVIPRRLVTSCEHFHREAAGIVPPNGVRIHVAGIDLIRDDKGDFRVLEDNLR 190 Query 191 SPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADPTVVVLTP 250 SPSGVSYVMENRRTMARVFPNLFATHRVRAV DYASHLLRALRN+A TN ADPTVVVLTP Sbjct 191 SPSGVSYVMENRRTMARVFPNLFATHRVRAVGDYASHLLRALRNAAPTNVADPTVVVLTP 250 Query 251 GVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPL 310 GVYNSAYFEHSLLARQMGVELVEGRDLFCRDN VYMRTTEGERQVDVIYRRIDDAFLDP+ Sbjct 251 GVYNSAYFEHSLLARQMGVELVEGRDLFCRDNVVYMRTTEGERQVDVIYRRIDDAFLDPM 310 Query 311 QFRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLANVE 370 QFR DSVLGVAGL+NAARAGNVV+SSA+GNGVGDDKLVYTYVPT+IEYYL EKP+LANV+ Sbjct 311 QFRPDSVLGVAGLLNAARAGNVVISSAVGNGVGDDKLVYTYVPTIIEYYLGEKPVLANVD 370 Query 371 TLRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRDDPRSWIA 430 T RCWLDDEREEVLDRI ELV+KPVEGSGGYGIVFGP+A+ EL +++KIR+DPR+WIA Sbjct 371 TYRCWLDDEREEVLDRIEELVIKPVEGSGGYGIVFGPDATPKELTTIAKKIRNDPRAWIA 430 Query 431 QPMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRVVNSSQGG 490 QP+M+LSTVPT+I+ L PR+VDLRPFAVNDGN+VWVLPGGLTRVAL E S VVNSSQGG Sbjct 431 QPVMQLSTVPTQIDNKLVPRHVDLRPFAVNDGNDVWVLPGGLTRVALPENSLVVNSSQGG 490 Query 491 GSKDTWVLAPRASAAARELGAAQIVRSLPQPLCDPTVDAS 530 GSKDTWVLA RAS A REL AA++VR+LP+ P D++ Sbjct 491 GSKDTWVLASRASVADRELAAAEVVRALPKSGRGPKADSA 530 >gi|108800475|ref|YP_640672.1| hypothetical protein Mmcs_3509 [Mycobacterium sp. MCS] gi|119869613|ref|YP_939565.1| hypothetical protein Mkms_3581 [Mycobacterium sp. KMS] gi|126436098|ref|YP_001071789.1| hypothetical protein Mjls_3521 [Mycobacterium sp. JLS] gi|108770894|gb|ABG09616.1| protein of unknown function DUF404 [Mycobacterium sp. MCS] gi|119695702|gb|ABL92775.1| protein of unknown function DUF404 [Mycobacterium sp. KMS] gi|126235898|gb|ABN99298.1| protein of unknown function DUF404 [Mycobacterium sp. JLS] Length=567 Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust. Identities = 438/533 (83%), Positives = 473/533 (89%), Gaps = 6/533 (1%) Query 4 VSLPNQLNETRRRSPTRGER------IFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYA 57 VSL E+ R S T G R IF GYN+ Y AFDEMFD QG VRGPYKGI+A Sbjct 18 VSLRTLPTESSRSSRTNGARTKRHEGIFDGYNSVGGYDKAFDEMFDPQGNVRGPYKGIFA 77 Query 58 ELAPSDASELKARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQ 117 EL P+DAS+L+ARADAL RAFI+QGITFSLSGQERP PLDLVPRVISA EWTRLERGITQ Sbjct 78 ELEPADASDLQARADALDRAFINQGITFSLSGQERPLPLDLVPRVISAAEWTRLERGITQ 137 Query 118 RVKALECYLDDIYGDQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRD 177 RV+ALE YLDDIYG+Q ILRDGVIPRRLVTSCEHFHR+AVGI PPNGVRIHVAGIDLIRD Sbjct 138 RVRALEAYLDDIYGEQHILRDGVIPRRLVTSCEHFHREAVGISPPNGVRIHVAGIDLIRD 197 Query 178 HRGDFRVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAA 237 G FRVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRN+AA Sbjct 198 EHGSFRVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNAAA 257 Query 238 TNEADPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDV 297 +NEADPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDN VYMRTT GERQVDV Sbjct 258 SNEADPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNTVYMRTTAGERQVDV 317 Query 298 IYRRIDDAFLDPLQFRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIE 357 IYRRIDDAFLDP+QFR DSVLGVAGL+NAARAGNVV+SSA+GNGVGDDKLVYTYVPT+IE Sbjct 318 IYRRIDDAFLDPMQFRPDSVLGVAGLLNAARAGNVVISSAVGNGVGDDKLVYTYVPTIIE 377 Query 358 YYLHEKPLLANVETLRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAV 417 YYL EKPLLANV+T RCWLD+EREEVLDR+ ELV+KPVEGSGGYGIVFGP+AS EL + Sbjct 378 YYLGEKPLLANVDTYRCWLDEEREEVLDRVTELVIKPVEGSGGYGIVFGPDASDKELNTI 437 Query 418 SQKIRDDPRSWIAQPMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVAL 477 +KIR+DPR WIAQP+M+LSTVPT+I G LAPR+VDLRPFAVNDG++VWVLPGGLTRVAL Sbjct 438 CKKIRNDPRGWIAQPVMQLSTVPTQIGGKLAPRHVDLRPFAVNDGDDVWVLPGGLTRVAL 497 Query 478 VEGSRVVNSSQGGGSKDTWVLAPRASAAARELGAAQIVRSLPQPLCDPTVDAS 530 EGS VVNSSQGGGSKDTWVLA RASAA REL AA++VRSLP+ VD + Sbjct 498 PEGSLVVNSSQGGGSKDTWVLASRASAADRELAAAEVVRSLPKSAKANKVDKN 550 >gi|145223253|ref|YP_001133931.1| hypothetical protein Mflv_2666 [Mycobacterium gilvum PYR-GCK] gi|315443713|ref|YP_004076592.1| hypothetical protein Mspyr1_21030 [Mycobacterium sp. Spyr1] gi|145215739|gb|ABP45143.1| protein of unknown function DUF404 [Mycobacterium gilvum PYR-GCK] gi|315262016|gb|ADT98757.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1] Length=544 Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust. Identities = 426/515 (83%), Positives = 466/515 (91%), Gaps = 0/515 (0%) Query 16 RSPTRGERIFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELAPSDASELKARADALG 75 R+ R + +FGGYN Y+ AFDEMFDAQG VRGPYKGI+ EL P+D S+L+ARA+ALG Sbjct 15 RNAKRHDGVFGGYNKLGSYSQAFDEMFDAQGNVRGPYKGIHKELGPADVSDLEARAEALG 74 Query 76 RAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALECYLDDIYGDQEI 135 RAF DQGITFSLSGQERPFPLDLVPRVISA EWTRLERGI QRV+ALE YLDDIYG+QEI Sbjct 75 RAFTDQGITFSLSGQERPFPLDLVPRVISAAEWTRLERGIRQRVQALEMYLDDIYGEQEI 134 Query 136 LRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLEDNLRSPSGV 195 LRDGVIPRRL+TSCEHFHR+AVGIVPPNGVRIHVAGIDLIRD +G+FRVLEDNLRSPSGV Sbjct 135 LRDGVIPRRLITSCEHFHREAVGIVPPNGVRIHVAGIDLIRDEQGNFRVLEDNLRSPSGV 194 Query 196 SYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADPTVVVLTPGVYNS 255 SYVMENRRTMARVFPNLFATHRVRAV DYASHLLRALRN+AA N ADPTVVVLTPGVYNS Sbjct 195 SYVMENRRTMARVFPNLFATHRVRAVGDYASHLLRALRNAAANNVADPTVVVLTPGVYNS 254 Query 256 AYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQFRAD 315 AYFEHSLLARQMGVELVEGRDLFCRDN VYMRTTEGERQVDVIYRRIDD FLDP+ F+ D Sbjct 255 AYFEHSLLARQMGVELVEGRDLFCRDNAVYMRTTEGERQVDVIYRRIDDEFLDPMVFKPD 314 Query 316 SVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLANVETLRCW 375 SVLGVAG++NAARAGNVV+SSA+GNGVGDDKLVYTYVPT+IEYYL EKPLLANV+T RCW Sbjct 315 SVLGVAGILNAARAGNVVISSAVGNGVGDDKLVYTYVPTIIEYYLGEKPLLANVDTFRCW 374 Query 376 LDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRDDPRSWIAQPMME 435 LDDEREEVLDR+ ELV+KPVEGSGGYGIVFGP+AS+ ELA +++KI DPR WIAQP+M+ Sbjct 375 LDDEREEVLDRVDELVIKPVEGSGGYGIVFGPDASEKELATITKKIIADPRGWIAQPVMQ 434 Query 436 LSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRVVNSSQGGGSKDT 495 LSTVPT+I +LAPR+VDLRPFAVNDGN+VWVLPGGLTRVAL EGS VVNSSQGGGSKDT Sbjct 435 LSTVPTQIGDSLAPRHVDLRPFAVNDGNDVWVLPGGLTRVALPEGSLVVNSSQGGGSKDT 494 Query 496 WVLAPRASAAARELGAAQIVRSLPQPLCDPTVDAS 530 WVLA R S A REL AA++VRSLP+ TV S Sbjct 495 WVLASRTSVADRELAAAEVVRSLPKAPSSKTVGKS 529 >gi|120404865|ref|YP_954694.1| hypothetical protein Mvan_3911 [Mycobacterium vanbaalenii PYR-1] gi|119957683|gb|ABM14688.1| protein of unknown function DUF404 [Mycobacterium vanbaalenii PYR-1] Length=519 Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust. Identities = 425/496 (86%), Positives = 461/496 (93%), Gaps = 0/496 (0%) Query 24 IFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELAPSDASELKARADALGRAFIDQGI 83 +FGGYN Y+ AFDEMFDAQG VRGPYKGI+ ELAPSDASEL+AR+DALGRAF DQGI Sbjct 1 MFGGYNKLGSYSQAFDEMFDAQGNVRGPYKGIHKELAPSDASELEARSDALGRAFTDQGI 60 Query 84 TFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALECYLDDIYGDQEILRDGVIPR 143 TFSLSGQERPFPLDLVPRVISA EWTRLERGI QRV+ALE YLDDIYG+QEILRDGVIPR Sbjct 61 TFSLSGQERPFPLDLVPRVISAAEWTRLERGIRQRVQALEMYLDDIYGEQEILRDGVIPR 120 Query 144 RLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLEDNLRSPSGVSYVMENRR 203 RL+TSCEHFHR+AVGIVPPNGVRIHVAGIDLIRD +G+FRVLEDNLRSPSGVSYVMENRR Sbjct 121 RLITSCEHFHREAVGIVPPNGVRIHVAGIDLIRDAQGNFRVLEDNLRSPSGVSYVMENRR 180 Query 204 TMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADPTVVVLTPGVYNSAYFEHSLL 263 TMARVFPNLFATHRVRAV DY+SHLLRALRN+AA+N ADPTVVVLTPGVYNSAYFEHSLL Sbjct 181 TMARVFPNLFATHRVRAVGDYSSHLLRALRNAAASNVADPTVVVLTPGVYNSAYFEHSLL 240 Query 264 ARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQFRADSVLGVAGL 323 ARQMGVELVEGRDLFCRDN VYMRTTEGERQVDVIYRRIDD FLDP+QF+ DSVLGVAG+ Sbjct 241 ARQMGVELVEGRDLFCRDNFVYMRTTEGERQVDVIYRRIDDDFLDPMQFKPDSVLGVAGI 300 Query 324 VNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLANVETLRCWLDDEREEV 383 +NAARAGNVV+SSA+GNGVGDDKLVYTYVPT+IEYYL EKPLLANV+T RCWLDDEREEV Sbjct 301 LNAARAGNVVISSAVGNGVGDDKLVYTYVPTIIEYYLGEKPLLANVDTFRCWLDDEREEV 360 Query 384 LDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRDDPRSWIAQPMMELSTVPTRI 443 LDR+ ELV+KPVEGSGGYGIVFGP+AS ELAA+++KI DPR WIAQP+++LSTVPT+I Sbjct 361 LDRVGELVIKPVEGSGGYGIVFGPDASDRELAAITKKIIADPRGWIAQPVVQLSTVPTQI 420 Query 444 EGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRVVNSSQGGGSKDTWVLAPRAS 503 LAPR+VDLRPFAVNDG+EVWVLPGGLTRVAL EGS VVNSSQGGGSKDTWVLA R S Sbjct 421 GDELAPRHVDLRPFAVNDGDEVWVLPGGLTRVALPEGSLVVNSSQGGGSKDTWVLASRTS 480 Query 504 AAARELGAAQIVRSLP 519 A REL AA++VRSLP Sbjct 481 IADRELAAAEVVRSLP 496 >gi|169628725|ref|YP_001702374.1| hypothetical protein MAB_1635 [Mycobacterium abscessus ATCC 19977] gi|169240692|emb|CAM61720.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=556 Score = 833 bits (2151), Expect = 0.0, Method: Compositional matrix adjust. Identities = 415/505 (83%), Positives = 459/505 (91%), Gaps = 4/505 (0%) Query 20 RGERIFGGY----NTSDVYAMAFDEMFDAQGIVRGPYKGIYAELAPSDASELKARADALG 75 R ++IFGGY + Y+ AFDEMFDA G VRGPYKGIYAELAP+DA++L ARADALG Sbjct 20 RDDQIFGGYRELVSEKGSYSKAFDEMFDADGNVRGPYKGIYAELAPTDAADLAARADALG 79 Query 76 RAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALECYLDDIYGDQEI 135 RAFIDQGITFSLSGQERPFPLDLVPRVI+A EW+RLERGI QRV+ALE YL DIYGDQEI Sbjct 80 RAFIDQGITFSLSGQERPFPLDLVPRVIAAAEWSRLERGIAQRVRALEMYLADIYGDQEI 139 Query 136 LRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLEDNLRSPSGV 195 LRD VIPRRLVTSCEHFHR+A GI PPNGVRIHVAGIDL+RD +G FRVLEDNLRSPSGV Sbjct 140 LRDEVIPRRLVTSCEHFHREAAGINPPNGVRIHVAGIDLVRDAQGTFRVLEDNLRSPSGV 199 Query 196 SYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADPTVVVLTPGVYNS 255 SYVMENRRTMARVFP+LFATHRVRAVDDY+SHLLRALR SAATNEADPTVVVLTPGV NS Sbjct 200 SYVMENRRTMARVFPDLFATHRVRAVDDYSSHLLRALRKSAATNEADPTVVVLTPGVANS 259 Query 256 AYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQFRAD 315 AYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDD +LDP+QFR D Sbjct 260 AYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDTYLDPMQFRPD 319 Query 316 SVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLANVETLRCW 375 SVLGVAGL+NAARAGNVV+SSA+GNGVGDDKLVYTYVPT+IEYYL EKP++ANV+T RCW Sbjct 320 SVLGVAGLLNAARAGNVVISSAVGNGVGDDKLVYTYVPTIIEYYLGEKPIVANVDTFRCW 379 Query 376 LDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRDDPRSWIAQPMME 435 LD+EREEVLDR+ LV+KPVEGSGGYGIVFGP+AS+ E AA+++KI+ DPR W+AQP+++ Sbjct 380 LDEEREEVLDRLEHLVIKPVEGSGGYGIVFGPDASEKERAAIAKKIKADPRGWVAQPVVQ 439 Query 436 LSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRVVNSSQGGGSKDT 495 LSTVPT+I+ L PR+VDLRPFAVNDG++VWVLPGGLTRVAL EGS VVNSSQGGGSKDT Sbjct 440 LSTVPTKIDDQLVPRHVDLRPFAVNDGDDVWVLPGGLTRVALPEGSLVVNSSQGGGSKDT 499 Query 496 WVLAPRASAAARELGAAQIVRSLPQ 520 WVLA RAS A REL A++V LPQ Sbjct 500 WVLASRASVAERELAGAELVSELPQ 524 >gi|226360418|ref|YP_002778196.1| hypothetical protein ROP_10040 [Rhodococcus opacus B4] gi|226238903|dbj|BAH49251.1| hypothetical protein [Rhodococcus opacus B4] Length=541 Score = 805 bits (2078), Expect = 0.0, Method: Compositional matrix adjust. Identities = 389/507 (77%), Positives = 440/507 (87%), Gaps = 0/507 (0%) Query 14 RRRSPTRGERIFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELAPSDASELKARADA 73 R R P +F GY Y +AFDEMFD G VR PYKG++ L P+D ++L AR+DA Sbjct 4 RPRKPAEPAHVFDGYTDIGRYGLAFDEMFDRDGTVRPPYKGVFKALEPADRADLAARSDA 63 Query 74 LGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALECYLDDIYGDQ 133 LGRAFIDQG+TFSLSGQERPFPLDLVPRVI+A EWTRLE+GI QRV+ALE +LDD+YG+Q Sbjct 64 LGRAFIDQGVTFSLSGQERPFPLDLVPRVIAAAEWTRLEKGIKQRVQALEMFLDDVYGEQ 123 Query 134 EILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLEDNLRSPS 193 ILRD V+P+RLVTSCEHFHR+A GIVPPNGVRIHVAGIDL+RD G FRVLEDNLRSPS Sbjct 124 RILRDHVLPKRLVTSCEHFHREASGIVPPNGVRIHVAGIDLVRDENGVFRVLEDNLRSPS 183 Query 194 GVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADPTVVVLTPGVY 253 GVSYVMENRRTMARVFP+LF +HRVR+V DYASHLLRALR SAA NEADPTVVVLTPGV Sbjct 184 GVSYVMENRRTMARVFPDLFMSHRVRSVGDYASHLLRALRASAALNEADPTVVVLTPGVA 243 Query 254 NSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQFR 313 NSAYFEHSLLARQMGVELVEGRDLFCRDN VYMRTTEGERQVDVIYRRIDD +LDP+ FR Sbjct 244 NSAYFEHSLLARQMGVELVEGRDLFCRDNMVYMRTTEGERQVDVIYRRIDDDYLDPMHFR 303 Query 314 ADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLANVETLR 373 DSVLGVAG++NAARAGNVV+SSA+GNGVGDDKLVYTYVP +I+YYL EKPLLANV+T R Sbjct 304 PDSVLGVAGVLNAARAGNVVISSAVGNGVGDDKLVYTYVPQIIDYYLGEKPLLANVDTFR 363 Query 374 CWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRDDPRSWIAQPM 433 CWLD+EREEVLDR+ ELV+KPVEGSGGYGIVFGP+AS EL +++KI+ DPR WIAQP+ Sbjct 364 CWLDEEREEVLDRVGELVIKPVEGSGGYGIVFGPDASPKELNTITRKIKADPRGWIAQPV 423 Query 434 MELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRVVNSSQGGGSK 493 ++LSTVPT++ L PR+VDLRPFAVNDG++VWVLPGGLTRVAL EGS VVNSSQGGGSK Sbjct 424 VQLSTVPTKVGDELVPRHVDLRPFAVNDGDDVWVLPGGLTRVALPEGSLVVNSSQGGGSK 483 Query 494 DTWVLAPRASAAARELGAAQIVRSLPQ 520 DTWVLA R+S REL ++V + Q Sbjct 484 DTWVLASRSSDEERELAGEELVAAPAQ 510 >gi|111018294|ref|YP_701266.1| hypothetical protein RHA1_ro01284 [Rhodococcus jostii RHA1] gi|110817824|gb|ABG93108.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=599 Score = 804 bits (2076), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/502 (78%), Positives = 437/502 (88%), Gaps = 0/502 (0%) Query 14 RRRSPTRGERIFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELAPSDASELKARADA 73 R R P +F GY Y +AFDEMFD G VR PYKG++ L P+D ++L AR+DA Sbjct 60 RPRKPAEPAHVFDGYTDVGRYGLAFDEMFDRDGTVRPPYKGVFKALEPADRADLAARSDA 119 Query 74 LGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALECYLDDIYGDQ 133 LGRAFIDQG+TFSLSGQERPFPLDLVPRVI+A EWTRLE+GI QRV+ALE +LDD+YG+Q Sbjct 120 LGRAFIDQGVTFSLSGQERPFPLDLVPRVIAAAEWTRLEKGIKQRVQALEMFLDDVYGEQ 179 Query 134 EILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLEDNLRSPS 193 ILRD V+P+RLVTSCEHFHR+A GIVPPNGVRIHVAGIDL+RD G FRVLEDNLRSPS Sbjct 180 RILRDHVLPKRLVTSCEHFHREASGIVPPNGVRIHVAGIDLVRDENGVFRVLEDNLRSPS 239 Query 194 GVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADPTVVVLTPGVY 253 GVSYVMENRRTMARVFP+LF +HRVR+V DYASHLLRALR SAA NEADPTVVVLTPGV Sbjct 240 GVSYVMENRRTMARVFPDLFMSHRVRSVGDYASHLLRALRASAALNEADPTVVVLTPGVA 299 Query 254 NSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQFR 313 NSAYFEHSLLARQMGVELVEGRDLFCRDN VYMRTTEGERQVDVIYRRIDD +LDP+ FR Sbjct 300 NSAYFEHSLLARQMGVELVEGRDLFCRDNMVYMRTTEGERQVDVIYRRIDDDYLDPMHFR 359 Query 314 ADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLANVETLR 373 DSVLGVAG++NAARAGNVV+SSA+GNGVGDDKLVYTYVP +I+YYL EKPLLANV+T R Sbjct 360 PDSVLGVAGVLNAARAGNVVISSAVGNGVGDDKLVYTYVPQIIDYYLGEKPLLANVDTFR 419 Query 374 CWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRDDPRSWIAQPM 433 CWLD+E EEVLDR+ ELV+KPVEGSGGYGIVFGP+AS EL +++KI+ DPR WIAQP+ Sbjct 420 CWLDEECEEVLDRVDELVIKPVEGSGGYGIVFGPDASPKELNTIARKIKADPRGWIAQPV 479 Query 434 MELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRVVNSSQGGGSK 493 ++LSTVPT++ L PR+VDLRPFAVNDG++VWVLPGGLTRVAL EGS VVNSSQGGGSK Sbjct 480 VQLSTVPTKVGDELVPRHVDLRPFAVNDGDDVWVLPGGLTRVALPEGSLVVNSSQGGGSK 539 Query 494 DTWVLAPRASAAARELGAAQIV 515 DTWVLA R+S REL ++V Sbjct 540 DTWVLASRSSDEERELAGEELV 561 >gi|333918819|ref|YP_004492400.1| hypothetical protein AS9A_1148 [Amycolicicoccus subflavus DQS3-9A1] gi|333481040|gb|AEF39600.1| hypothetical protein AS9A_1148 [Amycolicicoccus subflavus DQS3-9A1] Length=552 Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/546 (73%), Positives = 458/546 (84%), Gaps = 11/546 (2%) Query 5 SLPNQLNETRRRSPTRGERIFGGYNTS----DVYAMAFDEMFDAQGIVRGPYKGIYAELA 60 +L L+++ + GE +FGGY + + YA+A DEMFD +G VR YKGI+ LA Sbjct 13 ALYEALHKSDDPASGNGEYVFGGYADTGPHYEHYALAHDEMFDGEGNVRSAYKGIFKALA 72 Query 61 PSDASELKARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVK 120 P+ A++L ARADALGRAF+DQGITFSLSGQERPFPLDL+PRVI+A EWT+LERGI QRV+ Sbjct 73 PATANDLAARADALGRAFLDQGITFSLSGQERPFPLDLIPRVIAAGEWTKLERGIKQRVQ 132 Query 121 ALECYLDDIYGDQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRG 180 ALE +LDD+YG+Q ILRDGV+PRRL+TSC+HFHR+A GIVPPN VRIHVAGIDLIRD G Sbjct 133 ALELFLDDVYGEQNILRDGVLPRRLITSCQHFHREAAGIVPPNEVRIHVAGIDLIRDDYG 192 Query 181 DFRVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNE 240 FRVLEDNLRSPSGVSYV+ENRRTM RVFP+LFA+HRVRAV DY ++LLRALRNSAA NE Sbjct 193 TFRVLEDNLRSPSGVSYVLENRRTMTRVFPDLFASHRVRAVADYPAYLLRALRNSAALNE 252 Query 241 ADPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYR 300 ADPTVVVLTPGV NSAYFEHSLLARQMGVELVEGRDLFCRDN VYMRTTEGE+QVDVIYR Sbjct 253 ADPTVVVLTPGVANSAYFEHSLLARQMGVELVEGRDLFCRDNIVYMRTTEGEQQVDVIYR 312 Query 301 RIDDAFLDPLQFRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYL 360 RIDD FLDPLQFR +SVLGV G++NAARAGNVV+SSA+GNGVGDDKL+YTYVPT+IEYYL Sbjct 313 RIDDEFLDPLQFRPNSVLGVPGILNAARAGNVVISSAVGNGVGDDKLIYTYVPTIIEYYL 372 Query 361 HEKPLLANVETLRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQK 420 +EKP L NV+T RCW+ +E EEVLDRI ELV+KPVEGSGGYGIVFGP+AS A+L +S++ Sbjct 373 NEKPSLPNVDTFRCWIPEELEEVLDRIDELVVKPVEGSGGYGIVFGPDASPAQLKKLSRQ 432 Query 421 IRDDPRSWIAQPMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEG 480 +RD PR WIAQP+++LSTVPT+ LAPR+VDLRPFAVNDG++VWVLPGGLTRVAL EG Sbjct 433 LRDSPRDWIAQPVVQLSTVPTKSGDELAPRHVDLRPFAVNDGDDVWVLPGGLTRVALTEG 492 Query 481 SRVVNSSQGGGSKDTWVLA-PRASAAARELGAAQIVRSLPQPLCDPTVDASGYEPHDQQP 539 S VVNSSQGGGSKDTWVLA R++A REL ++V + T + P Sbjct 493 SLVVNSSQGGGSKDTWVLATTRSAAQDRELAGEELVSEV------KTAHKAETGPELAID 546 Query 540 QQQQQQ 545 Q+QQQQ Sbjct 547 QEQQQQ 552 >gi|229493138|ref|ZP_04386930.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229319869|gb|EEN85698.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=541 Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/510 (76%), Positives = 442/510 (87%), Gaps = 3/510 (0%) Query 24 IFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELAPSDASELKARADALGRAFIDQGI 83 +F GY+ Y +AFDEMF+ G VRGPYKG+Y LAP+ +++L ARADALGRAFIDQG+ Sbjct 24 VFDGYSDIGRYELAFDEMFEPDGSVRGPYKGVYKALAPTSSADLAARADALGRAFIDQGV 83 Query 84 TFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALECYLDDIYGDQEILRDGVIPR 143 TFSLSGQERPFPLDLVPRVI+A EW+RLE+GI QRVKALE +L DIYG+Q ILRD V+PR Sbjct 84 TFSLSGQERPFPLDLVPRVIAAQEWSRLEKGIKQRVKALELFLADIYGEQRILRDHVLPR 143 Query 144 RLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLEDNLRSPSGVSYVMENRR 203 RLVTSCEHFHR+A GIVPPNGVRIHVAGIDL+RD G+FRVLEDNLRSPSGVSYVMENRR Sbjct 144 RLVTSCEHFHREAAGIVPPNGVRIHVAGIDLVRDEAGEFRVLEDNLRSPSGVSYVMENRR 203 Query 204 TMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADPTVVVLTPGVYNSAYFEHSLL 263 TM RVFP+LF +H+VRAV DYA+HLLRALR AA NEADPTVVVLTPG+ NSAYFEHSLL Sbjct 204 TMTRVFPDLFMSHKVRAVGDYATHLLRALRAGAALNEADPTVVVLTPGIANSAYFEHSLL 263 Query 264 ARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQFRADSVLGVAGL 323 ARQMGVELVEGRDLFCRDN VYMRTTEGERQVDVIYRRIDD +LDP+ FR DS+LGVAGL Sbjct 264 ARQMGVELVEGRDLFCRDNMVYMRTTEGERQVDVIYRRIDDEYLDPMHFRPDSILGVAGL 323 Query 324 VNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLANVETLRCWLDDEREEV 383 +NAARAGNVV+SSA+GNGVGDDKLVYTYVP +I+YYL EKPLL NV+T RCWLD+E E+V Sbjct 324 LNAARAGNVVISSAVGNGVGDDKLVYTYVPQIIDYYLGEKPLLQNVDTFRCWLDEECEQV 383 Query 384 LDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRDDPRSWIAQPMMELSTVPTRI 443 LDR+ ELV+KPVEGSGGYGIVFGP+AS ELAA+++KI+ DPR WIAQP+++LSTVPT+I Sbjct 384 LDRVAELVIKPVEGSGGYGIVFGPDASPKELAAITRKIKADPRGWIAQPLVQLSTVPTKI 443 Query 444 EGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRVVNSSQGGGSKDTWVLAPRAS 503 + L+PR+VDLRPFAVNDG +VWVLPGGLTRVAL EGS VVNSSQGGGSKDTWVLA R S Sbjct 444 DDVLSPRHVDLRPFAVNDGEDVWVLPGGLTRVALPEGSLVVNSSQGGGSKDTWVLASRTS 503 Query 504 AAARELGAAQIVRSLP---QPLCDPTVDAS 530 EL ++V P +P+ P + S Sbjct 504 DEDPELSGEELVSEPPESAEPVQGPELSTS 533 >gi|226307253|ref|YP_002767213.1| hypothetical protein RER_37660 [Rhodococcus erythropolis PR4] gi|226186370|dbj|BAH34474.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=540 Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust. Identities = 386/510 (76%), Positives = 442/510 (87%), Gaps = 3/510 (0%) Query 24 IFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELAPSDASELKARADALGRAFIDQGI 83 +F GY+ Y +AFDEMF+ G VR PYKG+Y LAP+ +++L ARADALGRAFIDQG+ Sbjct 24 VFDGYSDIGRYELAFDEMFEPDGSVRAPYKGVYKALAPTSSADLAARADALGRAFIDQGV 83 Query 84 TFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALECYLDDIYGDQEILRDGVIPR 143 TFSLSGQERPFPLDLVPRVI+A EW+RLE+GI QRVKALE +L DIYG+Q ILRD V+PR Sbjct 84 TFSLSGQERPFPLDLVPRVIAAQEWSRLEKGIKQRVKALELFLADIYGEQRILRDHVLPR 143 Query 144 RLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLEDNLRSPSGVSYVMENRR 203 RLVTSCEHFHR+A GIVPPNGVRIHVAGIDL+RD G+FRVLEDNLRSPSGVSYVMENRR Sbjct 144 RLVTSCEHFHREAAGIVPPNGVRIHVAGIDLVRDEAGEFRVLEDNLRSPSGVSYVMENRR 203 Query 204 TMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADPTVVVLTPGVYNSAYFEHSLL 263 TM RVFP+LF +H+VRAV DYA+HLLRALR AA NEADPTVVVLTPG+ NSAYFEHSLL Sbjct 204 TMTRVFPDLFMSHKVRAVGDYATHLLRALRAGAALNEADPTVVVLTPGIANSAYFEHSLL 263 Query 264 ARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQFRADSVLGVAGL 323 ARQMGVELVEGRDLFCRDN VYMRTTEGERQVDVIYRRIDD +LDP+ FR DS+LGVAGL Sbjct 264 ARQMGVELVEGRDLFCRDNMVYMRTTEGERQVDVIYRRIDDEYLDPMHFRPDSILGVAGL 323 Query 324 VNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLANVETLRCWLDDEREEV 383 +NAARAGNVV+SSA+GNGVGDDKLVYTYVP +I+YYL EKPLL NV+T RCWLD+E E+V Sbjct 324 LNAARAGNVVISSAVGNGVGDDKLVYTYVPQIIDYYLGEKPLLQNVDTFRCWLDEECEQV 383 Query 384 LDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRDDPRSWIAQPMMELSTVPTRI 443 LDR+ ELV+KPVEGSGGYGIVFGP+AS ELAA+++KI+ DPR WIAQP+++LSTVPT+I Sbjct 384 LDRVAELVIKPVEGSGGYGIVFGPDASPKELAAITRKIKADPRGWIAQPLVQLSTVPTKI 443 Query 444 EGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRVVNSSQGGGSKDTWVLAPRAS 503 + L+PR+VDLRPFAVNDG +VWVLPGGLTRVAL EGS VVNSSQGGGSKDTWVLA R+S Sbjct 444 DDVLSPRHVDLRPFAVNDGEDVWVLPGGLTRVALPEGSLVVNSSQGGGSKDTWVLASRSS 503 Query 504 AAARELGAAQIVRSLP---QPLCDPTVDAS 530 EL ++V P +P+ P + S Sbjct 504 DEDPELSGEELVSEPPESAEPVQGPELSTS 533 >gi|262203073|ref|YP_003274281.1| hypothetical protein Gbro_3183 [Gordonia bronchialis DSM 43247] gi|262086420|gb|ACY22388.1| protein of unknown function DUF404 [Gordonia bronchialis DSM 43247] Length=606 Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/509 (75%), Positives = 436/509 (86%), Gaps = 6/509 (1%) Query 12 ETRRRSPTRGE-----RIFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELAPSDASE 66 ++R ++ + GE +F GY +S Y A+DEMFD+ G VR PY+GI+ + + ++ Sbjct 49 QSRSKAASDGEVPSATGLFAGY-SSGPYGRAYDEMFDSSGDVRTPYRGIHKSMGRQERAD 107 Query 67 LKARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALECYL 126 L+ R +ALG A++DQG+TFSLSG+ERPFPLD+VPRVISA EW +LE G+TQRV+ALE +L Sbjct 108 LETRVEALGNAYLDQGVTFSLSGKERPFPLDVVPRVISAAEWNKLEAGVTQRVQALELFL 167 Query 127 DDIYGDQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLE 186 DDIYG+QEILRDGV+P+RLV SCEHFHRQA I PPNGVRIHVAGIDLIRD GDFRVLE Sbjct 168 DDIYGEQEILRDGVLPKRLVHSCEHFHRQAANIKPPNGVRIHVAGIDLIRDENGDFRVLE 227 Query 187 DNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADPTVV 246 DNLRSPSGVSYV+ENRR MARVFP+LFATHRVRAV DY SHLLRALR SAA NEADP +V Sbjct 228 DNLRSPSGVSYVLENRRAMARVFPDLFATHRVRAVADYPSHLLRALRASAAFNEADPNIV 287 Query 247 VLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAF 306 VLTPGV NSAYFEHSLLAR MGVELVEGRDLFCRDN VYMRTTEGE++VDVIYRRIDD F Sbjct 288 VLTPGVANSAYFEHSLLARLMGVELVEGRDLFCRDNVVYMRTTEGEQRVDVIYRRIDDDF 347 Query 307 LDPLQFRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLL 366 LDP+QFR DS+LGVAGL+NAARAGNVV+SSA+GNGVGDDKL+YTYVP +IEYYL EKP L Sbjct 348 LDPMQFRPDSMLGVAGLLNAARAGNVVISSAVGNGVGDDKLIYTYVPEIIEYYLGEKPSL 407 Query 367 ANVETLRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRDDPR 426 NV+TLRCWLD E EEVLDRI ELV+KPVEGSGGYGIVFGP+AS+AEL A+++K+R DPR Sbjct 408 QNVDTLRCWLDHECEEVLDRIDELVVKPVEGSGGYGIVFGPDASKAELDALARKVRSDPR 467 Query 427 SWIAQPMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRVVNS 486 WIAQP+++LSTVPT+I L PR+VDLRPFAVNDG VWVLPGGLTRVAL EGS VVNS Sbjct 468 GWIAQPVVQLSTVPTKIGDDLRPRHVDLRPFAVNDGESVWVLPGGLTRVALPEGSLVVNS 527 Query 487 SQGGGSKDTWVLAPRASAAARELGAAQIV 515 SQGGGSKDTWVLA R S RE+ A++V Sbjct 528 SQGGGSKDTWVLASRGSEDEREMSGAKVV 556 >gi|296140493|ref|YP_003647736.1| hypothetical protein Tpau_2799 [Tsukamurella paurometabola DSM 20162] gi|296028627|gb|ADG79397.1| protein of unknown function DUF404 [Tsukamurella paurometabola DSM 20162] Length=553 Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/510 (76%), Positives = 433/510 (85%), Gaps = 3/510 (0%) Query 11 NETRRRSPTR---GERIFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELAPSDASEL 67 + TRR + R R+F GY+ + + AFDEMF G VR PYK ++ L+ +D S+L Sbjct 9 SHTRRPAAPRLSDDARLFAGYDDAPSFGAAFDEMFADDGTVRSPYKRVFEALSSADESDL 68 Query 68 KARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALECYLD 127 AR DALG AFIDQG+TFSL G+ERPFPLDLVPRVI+A EW RLE+GI QRV+ALE +LD Sbjct 69 AARVDALGAAFIDQGVTFSLEGRERPFPLDLVPRVIAAGEWNRLEKGIKQRVRALEMFLD 128 Query 128 DIYGDQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLED 187 DIY +QEILRD V+P+RLVTSC HFHRQA GI PPNGVRIHVAGIDLIRD G FRVLED Sbjct 129 DIYSEQEILRDQVVPKRLVTSCAHFHRQAAGIRPPNGVRIHVAGIDLIRDAEGTFRVLED 188 Query 188 NLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADPTVVV 247 NLRSPSGVSYVMENRRTMA+VFP+LF HRVRAV DY+SHLLRALR SAA+NEADPTVVV Sbjct 189 NLRSPSGVSYVMENRRTMAQVFPDLFLRHRVRAVGDYSSHLLRALRRSAASNEADPTVVV 248 Query 248 LTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFL 307 LTPG+ NSAYFEHSLLARQMGVELVEGRDLFCRDN VYMRTT GE+QVDVIYRRIDD FL Sbjct 249 LTPGMANSAYFEHSLLARQMGVELVEGRDLFCRDNVVYMRTTGGEQQVDVIYRRIDDDFL 308 Query 308 DPLQFRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLA 367 DP+QFR DSVLGVAGL+NAARAGNVV+SSA+GNGVGDDKL YTYVP +I+YYL EKPLL Sbjct 309 DPMQFRPDSVLGVAGLLNAARAGNVVISSAVGNGVGDDKLTYTYVPEIIDYYLGEKPLLQ 368 Query 368 NVETLRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRDDPRS 427 NV+TLRCWLD+EREEVLDRI ELV+KPVEGSGGYGIVFGP+AS ELA + +K+ DPR Sbjct 369 NVDTLRCWLDEEREEVLDRIDELVIKPVEGSGGYGIVFGPDASDKELATMRRKVAADPRG 428 Query 428 WIAQPMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRVVNSS 487 WIAQP+++LSTVPT+I + PR+VDLRPFAVNDG++VWVLPGGLTRVAL EGS VVNSS Sbjct 429 WIAQPVVQLSTVPTKIGESARPRHVDLRPFAVNDGDDVWVLPGGLTRVALPEGSLVVNSS 488 Query 488 QGGGSKDTWVLAPRASAAARELGAAQIVRS 517 QGGGSKDTWVLA R+S A EL +V S Sbjct 489 QGGGSKDTWVLAARSSVAEAELEGEALVPS 518 >gi|317507854|ref|ZP_07965555.1| hypothetical protein HMPREF9336_01927 [Segniliparus rugosus ATCC BAA-974] gi|316253896|gb|EFV13265.1| hypothetical protein HMPREF9336_01927 [Segniliparus rugosus ATCC BAA-974] Length=556 Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/480 (78%), Positives = 421/480 (88%), Gaps = 0/480 (0%) Query 25 FGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELAPSDASELKARADALGRAFIDQGIT 84 F GY S + FDEMF+ G R PY+G++ L P D+ +L ARADALGRAFI+QGIT Sbjct 71 FDGYAESPGFEKNFDEMFEQDGSSRAPYRGVFQALEPLDSDDLTARADALGRAFINQGIT 130 Query 85 FSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALECYLDDIYGDQEILRDGVIPRR 144 FSLSGQERPFPLDL+PRVI+A EWT+LERGITQRV+ALE +LDD+YGDQEILRDGVIPR Sbjct 131 FSLSGQERPFPLDLIPRVIAAAEWTKLERGITQRVRALEAFLDDVYGDQEILRDGVIPRA 190 Query 145 LVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLEDNLRSPSGVSYVMENRRT 204 L+ SC+HFHRQA GI PPNGVRIHVAGID+IRD +G FRVLEDNLR+PSGVSYVMENRRT Sbjct 191 LIFSCQHFHRQAAGIRPPNGVRIHVAGIDIIRDGQGTFRVLEDNLRNPSGVSYVMENRRT 250 Query 205 MARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADPTVVVLTPGVYNSAYFEHSLLA 264 M RVFP+LF THRVR VDDY +HLLRALR +A TNE DPTVVVLTPGV NSA+FEHSLLA Sbjct 251 MTRVFPDLFGTHRVRPVDDYPAHLLRALRAAAPTNEDDPTVVVLTPGVANSAHFEHSLLA 310 Query 265 RQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQFRADSVLGVAGLV 324 RQMGVELVEGRDLFCRDN VYMRTTEGE QVDVIYRRIDD +LDPLQF+ +S+LGVAG+V Sbjct 311 RQMGVELVEGRDLFCRDNVVYMRTTEGEVQVDVIYRRIDDEYLDPLQFKPESLLGVAGIV 370 Query 325 NAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLANVETLRCWLDDEREEVL 384 NAARAGNVV+SSA+GNGVGDDKLVYTYVPTM+EYYL EKPLLANV+T RCW+ +E EE L Sbjct 371 NAARAGNVVISSAVGNGVGDDKLVYTYVPTMVEYYLGEKPLLANVDTFRCWIPEELEETL 430 Query 385 DRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRDDPRSWIAQPMMELSTVPTRIE 444 DRI ELVLKPVEGSGGYGIVFGP+AS+ ELA +++K+R +PR WIAQP+M+LSTVPT++ Sbjct 431 DRINELVLKPVEGSGGYGIVFGPDASEKELATLARKVRANPRDWIAQPVMQLSTVPTKVG 490 Query 445 GTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRVVNSSQGGGSKDTWVLAPRASA 504 ++PR+VDLRPFAVNDG VWVLPGGLTRVAL EGS VVNSSQGGGSKDTWVL R+ A Sbjct 491 DKVSPRHVDLRPFAVNDGENVWVLPGGLTRVALKEGSLVVNSSQGGGSKDTWVLGSRSQA 550 >gi|343926798|ref|ZP_08766291.1| hypothetical protein GOALK_072_00190 [Gordonia alkanivorans NBRC 16433] gi|343763158|dbj|GAA13217.1| hypothetical protein GOALK_072_00190 [Gordonia alkanivorans NBRC 16433] Length=502 Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust. Identities = 367/471 (78%), Positives = 418/471 (89%), Gaps = 1/471 (0%) Query 48 VRGPYKGIYAELAPSDASEL-KARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAP 106 +R PY+GIY ++ D+S+L +AR +ALGRA++DQG+TFSLSGQERPFPLD+VPRVISA Sbjct 1 MRTPYRGIYKAMSDEDSSDLVEARVEALGRAYLDQGVTFSLSGQERPFPLDIVPRVISAG 60 Query 107 EWTRLERGITQRVKALECYLDDIYGDQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVR 166 EW++LE GITQRV+ALE +LDDIYG+QEILRDGV+P+RLV SCEHFHRQA I PPNGVR Sbjct 61 EWSKLEAGITQRVQALELFLDDIYGEQEILRDGVLPKRLVHSCEHFHRQAANIRPPNGVR 120 Query 167 IHVAGIDLIRDHRGDFRVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYAS 226 IHVAGIDLIRD GDFRVLEDNLRSPSGVSYV+ENRR MARVFP+LF+ HRVRAV DY S Sbjct 121 IHVAGIDLIRDENGDFRVLEDNLRSPSGVSYVLENRRAMARVFPDLFSKHRVRAVADYPS 180 Query 227 HLLRALRNSAATNEADPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYM 286 HLLRALR SAA NEADP +VVLTPGV NSAYFEHSLLAR MGVELVEGRDLFCRDN VYM Sbjct 181 HLLRALRASAAFNEADPNIVVLTPGVANSAYFEHSLLARLMGVELVEGRDLFCRDNVVYM 240 Query 287 RTTEGERQVDVIYRRIDDAFLDPLQFRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDK 346 RTTEGE++VDVIYRRIDD FLDP+QFR DS+LGVAGL+NAARAGNVV+SSA+GNGVGDDK Sbjct 241 RTTEGEQRVDVIYRRIDDDFLDPMQFRPDSMLGVAGLLNAARAGNVVISSAVGNGVGDDK 300 Query 347 LVYTYVPTMIEYYLHEKPLLANVETLRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFG 406 L+YTYVP +IEYYL EKP L NV+TLRCWL +E EEVLDRI ELV+KPVEGSGGYGIVFG Sbjct 301 LIYTYVPEIIEYYLGEKPSLQNVDTLRCWLPEECEEVLDRIDELVVKPVEGSGGYGIVFG 360 Query 407 PEASQAELAAVSQKIRDDPRSWIAQPMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVW 466 PEA++AEL +++K+R+DPR WIAQP+++LSTVPT+I + PR+VDLRPFAVNDG VW Sbjct 361 PEATKAELDTLARKVRNDPRGWIAQPVVQLSTVPTKIGNEIRPRHVDLRPFAVNDGESVW 420 Query 467 VLPGGLTRVALVEGSRVVNSSQGGGSKDTWVLAPRASAAARELGAAQIVRS 517 VLPGGLTRVAL EGS VVNSSQGGGSKDTWVLA R S A REL A++V + Sbjct 421 VLPGGLTRVALPEGSLVVNSSQGGGSKDTWVLASRTSEAERELSGAKVVTT 471 >gi|296392908|ref|YP_003657792.1| hypothetical protein Srot_0474 [Segniliparus rotundus DSM 44985] gi|296180055|gb|ADG96961.1| protein of unknown function DUF404 [Segniliparus rotundus DSM 44985] Length=528 Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust. Identities = 377/496 (77%), Positives = 428/496 (87%), Gaps = 5/496 (1%) Query 14 RRRSPTRG-----ERIFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELAPSDASELK 68 +R+S T+G + F Y S + FDEMF+ G R PY+G++ L P D+ +L Sbjct 27 QRQSQTQGGGAQLDGAFEDYTESPGFEKNFDEMFEQDGSARAPYRGVFQALEPLDSDDLN 86 Query 69 ARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALECYLDD 128 ARA+ALGRAFI+QGITFSLSGQERPFPLDLVPRVI+A EW +LE+GITQRV+ALE +LDD Sbjct 87 ARAEALGRAFINQGITFSLSGQERPFPLDLVPRVIAAAEWAKLEKGITQRVRALEAFLDD 146 Query 129 IYGDQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLEDN 188 +YGDQEILRDGVIPR L+ SC+HFHRQA GI PPNGVRIHVAGID+IRD +G FRVLEDN Sbjct 147 VYGDQEILRDGVIPRSLIFSCQHFHRQASGIRPPNGVRIHVAGIDIIRDGQGTFRVLEDN 206 Query 189 LRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADPTVVVL 248 LR+PSGVSYVMENRRTM RVFP+LF THRVR VDDY +HLLRALR +AATNE DPTVVVL Sbjct 207 LRNPSGVSYVMENRRTMTRVFPDLFGTHRVRPVDDYPAHLLRALRAAAATNEDDPTVVVL 266 Query 249 TPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLD 308 TPGV NSA+FEHSLLARQMGVELVEGRDLFCRDN VYMRTTEGE QVDVIYRRIDD +LD Sbjct 267 TPGVANSAHFEHSLLARQMGVELVEGRDLFCRDNIVYMRTTEGEVQVDVIYRRIDDEYLD 326 Query 309 PLQFRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLAN 368 PLQF+ +S+LGVAG+VNAARAGNVV+SSA+GNGVGDDKLVYTYVP+MIEYYL EKPLLAN Sbjct 327 PLQFKPESLLGVAGIVNAARAGNVVISSAVGNGVGDDKLVYTYVPSMIEYYLGEKPLLAN 386 Query 369 VETLRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRDDPRSW 428 V+T RCW+ E E+ LDRI ELVLKPVEGSGGYGIVFGP+AS+ ELAA+S+KIR +PR W Sbjct 387 VDTYRCWIPHELEQTLDRINELVLKPVEGSGGYGIVFGPDASEKELAAMSRKIRANPRDW 446 Query 429 IAQPMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRVVNSSQ 488 +AQP+M+LSTVPT+I +APR+VDLRPFAVNDG VWVLPGGLTRVAL EGS VVNSSQ Sbjct 447 VAQPVMQLSTVPTKIGDKVAPRHVDLRPFAVNDGENVWVLPGGLTRVALKEGSLVVNSSQ 506 Query 489 GGGSKDTWVLAPRASA 504 GGGSKDTWVL R+ A Sbjct 507 GGGSKDTWVLGNRSQA 522 >gi|256375351|ref|YP_003099011.1| hypothetical protein Amir_1213 [Actinosynnema mirum DSM 43827] gi|255919654|gb|ACU35165.1| protein of unknown function DUF404 [Actinosynnema mirum DSM 43827] Length=553 Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust. Identities = 373/510 (74%), Positives = 428/510 (84%), Gaps = 1/510 (0%) Query 8 NQLNETRRRSPTRGERIFGGY-NTSDVYAMAFDEMFDAQGIVRGPYKGIYAELAPSDASE 66 +QL T R+ R +F GY + +A A+DEMF A VR Y+ ++ +APS A E Sbjct 13 SQLRRTGPRAEARLGELFEGYLDPRRPHAGAYDEMFGADASVRPAYRALHDSIAPSRAPE 72 Query 67 LKARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALECYL 126 L ARA+AL RAF+DQGITFSLSGQERPFPLDL+PRVI+A EW++LERGI QRV+ALE +L Sbjct 73 LNARAEALDRAFVDQGITFSLSGQERPFPLDLIPRVITAGEWSKLERGIVQRVRALEMFL 132 Query 127 DDIYGDQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLE 186 DIYGD +I+RDGVIPRRL+TSCEHFHR+A I PPNGVR+HV+G+DL+RD G FRVLE Sbjct 133 ADIYGDAQIVRDGVIPRRLITSCEHFHREAARISPPNGVRVHVSGVDLVRDEAGVFRVLE 192 Query 187 DNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADPTVV 246 DNLRSPSGVSYVMENRRTMARVFP+LFA HRVR+V DYA HLLRALRNSAA N ADPTVV Sbjct 193 DNLRSPSGVSYVMENRRTMARVFPDLFAQHRVRSVGDYAVHLLRALRNSAAPNAADPTVV 252 Query 247 VLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAF 306 VLTPGV NSAYFEHSLLARQMGVELVEGRDLFCRDN VY+RTTEGERQVDVIYRRIDD F Sbjct 253 VLTPGVANSAYFEHSLLARQMGVELVEGRDLFCRDNLVYLRTTEGERQVDVIYRRIDDTF 312 Query 307 LDPLQFRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLL 366 LDP+ R DSVLGVAGL+NAARAGNVV+++A+GNGV DDKLVYTY+P ++EYYL EKPLL Sbjct 313 LDPVHLRPDSVLGVAGLLNAARAGNVVIANAVGNGVADDKLVYTYLPEILEYYLGEKPLL 372 Query 367 ANVETLRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRDDPR 426 NV+T RCWL DER VLD + ELV+KPVEGSGGYGIVFGP+A+ EL A+ + IR +PR Sbjct 373 PNVDTYRCWLPDERGHVLDSLAELVVKPVEGSGGYGIVFGPQATTRELNALRRTIRANPR 432 Query 427 SWIAQPMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRVVNS 486 WIAQP+++LSTVPT+I LAPR+VDLRPFAVNDGN V+VLPGGLTRVAL EGS +VNS Sbjct 433 GWIAQPVVQLSTVPTKIGDRLAPRHVDLRPFAVNDGNFVFVLPGGLTRVALPEGSLIVNS 492 Query 487 SQGGGSKDTWVLAPRASAAARELGAAQIVR 516 SQGGGSKDTWVLA R+S REL +VR Sbjct 493 SQGGGSKDTWVLAARSSTVERELAEPGLVR 522 >gi|302531218|ref|ZP_07283560.1| DUF404 domain-containing protein [Streptomyces sp. AA4] gi|302440113|gb|EFL11929.1| DUF404 domain-containing protein [Streptomyces sp. AA4] Length=553 Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/495 (73%), Positives = 419/495 (85%), Gaps = 0/495 (0%) Query 15 RRSPTRGERIFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELAPSDASELKARADAL 74 RR+ G + G +A A+DEMF G VR PY+ +Y +A DAS+L R+ AL Sbjct 25 RRAARPGAQFDGYLAPERPHAGAYDEMFAPDGTVRAPYRALYGSIAALDASDLTNRSQAL 84 Query 75 GRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALECYLDDIYGDQE 134 RA +DQGITFSLSGQERPFPLDLVPRV+ A EW+RLERG+TQRV+ALE +L D+YGD++ Sbjct 85 DRAMVDQGITFSLSGQERPFPLDLVPRVLQATEWSRLERGVTQRVRALEAFLADVYGDRQ 144 Query 135 ILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLEDNLRSPSG 194 ILRDGV+PRRL+TSCEHFHR+A GI PPNGVRIHV+G+DL+RD G FRVLEDNLR+PSG Sbjct 145 ILRDGVLPRRLITSCEHFHREAYGIKPPNGVRIHVSGVDLVRDEEGTFRVLEDNLRNPSG 204 Query 195 VSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADPTVVVLTPGVYN 254 VSYVMENRRTMARVFP+LFA HRVR V DYASHLLRALR +AA N ADP VVVLTPGVYN Sbjct 205 VSYVMENRRTMARVFPDLFARHRVRPVGDYASHLLRALRAAAAPNVADPMVVVLTPGVYN 264 Query 255 SAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQFRA 314 SAYFEHSLLAR MGVELVEGRD+FCRDN VY+RTTEGERQVDVIYRRIDD FLDP+ R Sbjct 265 SAYFEHSLLARLMGVELVEGRDMFCRDNVVYLRTTEGERQVDVIYRRIDDDFLDPVHHRP 324 Query 315 DSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLANVETLRC 374 DSVLGVAG++NAARAGNVV+++A+GNGVGDDKLVYTYVP M+ YYL+EKP+L NV+T RC Sbjct 325 DSVLGVAGILNAARAGNVVVANAVGNGVGDDKLVYTYVPEMVRYYLNEKPILPNVDTFRC 384 Query 375 WLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRDDPRSWIAQPMM 434 WL DE + V+ ELV+KPVEGSGGYGIVFGPEAS+ EL A+ +K+R + R WIAQP++ Sbjct 385 WLPDEFDHVMQHADELVIKPVEGSGGYGIVFGPEASKKELDALRRKVRANRRGWIAQPVV 444 Query 435 ELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRVVNSSQGGGSKD 494 +LSTVP++++ LAPR+VDLRPFAVNDG E++VLPGGLTRVAL EGS VVNSSQGGGSKD Sbjct 445 QLSTVPSKVDDRLAPRHVDLRPFAVNDGKEIFVLPGGLTRVALPEGSLVVNSSQGGGSKD 504 Query 495 TWVLAPRASAAAREL 509 TWVLA R+S + +EL Sbjct 505 TWVLASRSSTSEQEL 519 >gi|300791010|ref|YP_003771301.1| hypothetical protein AMED_9210 [Amycolatopsis mediterranei U32] gi|299800524|gb|ADJ50899.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340532707|gb|AEK47912.1| hypothetical protein RAM_47235 [Amycolatopsis mediterranei S699] Length=552 Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/509 (71%), Positives = 425/509 (84%), Gaps = 6/509 (1%) Query 6 LPNQLNETRRRSPTR----GERIFGGYNTSD-VYAMAFDEMFDAQGIVRGPYKGIYAELA 60 LP R+ + +R G+R F GY + D +A A+DEMF A G VRGPY+ +Y +A Sbjct 11 LPPSGRRARKAATSRITRPGDR-FEGYLSPDRPHAGAYDEMFAADGSVRGPYRALYESIA 69 Query 61 PSDASELKARADALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVK 120 DA +L +R AL RA +DQGITFSLSGQERPFPLDLVPRVI A EWT++ERG+ QRV+ Sbjct 70 ALDAHDLNSRTLALDRAMVDQGITFSLSGQERPFPLDLVPRVIQAAEWTKIERGVAQRVR 129 Query 121 ALECYLDDIYGDQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRG 180 ALE +L DIYGD+ ILR+GV+PRRL+TSC HF R+A GI PPNGVRIHV+G+DL+RD G Sbjct 130 ALEAFLADIYGDRLILREGVLPRRLITSCVHFQREAFGINPPNGVRIHVSGVDLVRDEEG 189 Query 181 DFRVLEDNLRSPSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNE 240 FRVLEDNLR+PSGVSYVMENRRTMARVFP+LFA HRVR V DYASHLLRALR +AA N Sbjct 190 TFRVLEDNLRNPSGVSYVMENRRTMARVFPDLFAQHRVRPVGDYASHLLRALRAAAAANV 249 Query 241 ADPTVVVLTPGVYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYR 300 ADPTVVVLTPG++NSAYFEHSLLAR MGVELVEGRD+FCRDN VY+RTTEGERQVDVIYR Sbjct 250 ADPTVVVLTPGIHNSAYFEHSLLARLMGVELVEGRDMFCRDNVVYLRTTEGERQVDVIYR 309 Query 301 RIDDAFLDPLQFRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYL 360 RIDD FLDP+ +R DSVLGVAG+ NAARAGNVV+++AIGNGVGDDKLVYTYVP M++YYL Sbjct 310 RIDDEFLDPVHYRPDSVLGVAGVQNAARAGNVVIANAIGNGVGDDKLVYTYVPEMVKYYL 369 Query 361 HEKPLLANVETLRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQK 420 +EKPLL NV+T RCWL DE + V+ + ELV+KPV+GSGGYGIVFGPEA++ +L + +K Sbjct 370 NEKPLLPNVDTFRCWLPDEFDHVMAHLDELVVKPVDGSGGYGIVFGPEATKKDLDTLRRK 429 Query 421 IRDDPRSWIAQPMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEG 480 +R R WIAQP+++LSTVP +++ LAPR+VDLRPFAVNDG +++VLPGGLTRVAL EG Sbjct 430 VRAHRRGWIAQPVVQLSTVPAKVDDRLAPRHVDLRPFAVNDGKDIFVLPGGLTRVALPEG 489 Query 481 SRVVNSSQGGGSKDTWVLAPRASAAAREL 509 S VVNSSQGGGSKDTWVLA RAS A REL Sbjct 490 SLVVNSSQGGGSKDTWVLASRASTAEREL 518 >gi|158313932|ref|YP_001506440.1| hypothetical protein Franean1_2098 [Frankia sp. EAN1pec] gi|158109337|gb|ABW11534.1| protein of unknown function DUF404 [Frankia sp. EAN1pec] Length=526 Score = 630 bits (1626), Expect = 1e-178, Method: Compositional matrix adjust. Identities = 310/466 (67%), Positives = 372/466 (80%), Gaps = 0/466 (0%) Query 35 AMAFDEMFDAQGIVRGPYKGIYAELAPSDASELKARADALGRAFIDQGITFSLSGQERPF 94 A A+DE+FDA R Y ++ L P +S+L AR AL RAF D GITF+L G+ERPF Sbjct 6 AAAWDEVFDAAHRPREVYTALHDALQPLSSSDLAARKIALDRAFRDAGITFNLFGEERPF 65 Query 95 PLDLVPRVISAPEWTRLERGITQRVKALECYLDDIYGDQEILRDGVIPRRLVTSCEHFHR 154 PLDLVPR++S EW +ERG+TQRV+ALE +LDD+YG ++L DG++PRRLV S HFHR Sbjct 66 PLDLVPRLLSCDEWDVIERGVTQRVRALEAFLDDVYGRADVLADGIVPRRLVLSSSHFHR 125 Query 155 QAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLEDNLRSPSGVSYVMENRRTMARVFPNLFA 214 A GI PPNGVR HV+GIDL+RD RGDFRVLEDN+R PSGVSYV+ENRR M RVFP LF+ Sbjct 126 AAHGIDPPNGVRAHVSGIDLVRDERGDFRVLEDNVRVPSGVSYVIENRRAMTRVFPELFS 185 Query 215 THRVRAVDDYASHLLRALRNSAATNEADPTVVVLTPGVYNSAYFEHSLLARQMGVELVEG 274 THRVR V DYA+HLL ALR +A ADPTVVVLTPGVYNSAYFEH+LLARQMGVELVEG Sbjct 186 THRVRPVADYATHLLHALRAAAPPEVADPTVVVLTPGVYNSAYFEHALLARQMGVELVEG 245 Query 275 RDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQFRADSVLGVAGLVNAARAGNVVL 334 RDL R+N+V MRTTEG++ V V+YRR+DD +LDPL FR +S++G AGL+NAARAGNV + Sbjct 246 RDLSVRNNRVTMRTTEGDQPVHVVYRRVDDDWLDPLHFRPESMVGCAGLLNAARAGNVTI 305 Query 335 SSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLANVETLRCWLDDEREEVLDRIRELVLKP 394 ++A+GNGV DDKL+YTYVP +I YYL E+P L NV+T R D+R VLD + LV+KP Sbjct 306 ANAVGNGVADDKLMYTYVPDLIRYYLGEEPALGNVDTFRLEDPDQRAHVLDNLESLVVKP 365 Query 395 VEGSGGYGIVFGPEASQAELAAVSQKIRDDPRSWIAQPMMELSTVPTRIEGTLAPRYVDL 454 V+GSGG GIV GP+A++AEL A+ ++ DPR WIAQ +++LST PT + L PR+VDL Sbjct 366 VDGSGGKGIVIGPQATEAELVALRARVLADPRGWIAQRVVKLSTSPTLADDRLGPRHVDL 425 Query 455 RPFAVNDGNEVWVLPGGLTRVALVEGSRVVNSSQGGGSKDTWVLAP 500 RPFAVNDGN +WVLPGGLTRVAL GS VVNSSQGGGSKDTWVLAP Sbjct 426 RPFAVNDGNRIWVLPGGLTRVALPRGSLVVNSSQGGGSKDTWVLAP 471 >gi|312198642|ref|YP_004018703.1| hypothetical protein FraEuI1c_4843 [Frankia sp. EuI1c] gi|311229978|gb|ADP82833.1| protein of unknown function DUF404 [Frankia sp. EuI1c] Length=609 Score = 630 bits (1625), Expect = 2e-178, Method: Compositional matrix adjust. Identities = 316/484 (66%), Positives = 370/484 (77%), Gaps = 0/484 (0%) Query 24 IFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELAPSDASELKARADALGRAFIDQGI 83 +F GY A+DE+FD G+ R Y +Y L P + +L AR AL RAF D GI Sbjct 22 LFEGYPAEVQATAAWDEVFDPAGVPREVYAALYDALQPLSSGDLAARKAALDRAFRDAGI 81 Query 84 TFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALECYLDDIYGDQEILRDGVIPR 143 TF L G+ERPFPLDLVPR++S EW +ERG+ QRV+ALE +L DIYG EIL DG++PR Sbjct 82 TFILFGEERPFPLDLVPRLLSGSEWDTIERGVVQRVRALEAFLADIYGRAEILDDGIVPR 141 Query 144 RLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLEDNLRSPSGVSYVMENRR 203 RLV S HFHR A GI PPNGVR HV+GIDLIRD +G FRVLEDN+R PSGVSYV+ENRR Sbjct 142 RLVMSSSHFHRAAHGIDPPNGVRCHVSGIDLIRDEQGRFRVLEDNVRVPSGVSYVIENRR 201 Query 204 TMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADPTVVVLTPGVYNSAYFEHSLL 263 M RVFP LFATHRVR V DYASHLL ALR +A ADPTVVVLTPG+YNSAYFEH+LL Sbjct 202 AMTRVFPELFATHRVRPVADYASHLLHALRAAAPPEVADPTVVVLTPGIYNSAYFEHALL 261 Query 264 ARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQFRADSVLGVAGL 323 ARQMGVELVEGRDL RDNQV MRTTEGE+ V VIYRRIDD +LDPL FR +SV+G AGL Sbjct 262 ARQMGVELVEGRDLQVRDNQVTMRTTEGEQPVHVIYRRIDDDWLDPLHFRPESVVGCAGL 321 Query 324 VNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLANVETLRCWLDDEREEV 383 +NAARAG V +++ +GNGV DDKL+YTYVP +I YYL E+P+L NV+T R D+R V Sbjct 322 INAARAGEVTIANGVGNGVADDKLMYTYVPDLIRYYLGEEPVLPNVDTYRVEDPDQRAYV 381 Query 384 LDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRDDPRSWIAQPMMELSTVPTRI 443 LD + ELV+KPV+GSGG GIV GP+A+ ELA + ++ DPR WIAQ ++ LST PT Sbjct 382 LDHLDELVVKPVDGSGGKGIVIGPQATDEELATLRGQVTADPRGWIAQRLVRLSTSPTLS 441 Query 444 EGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRVVNSSQGGGSKDTWVLAPRAS 503 L PR++DLRPFAVNDG+ +WVLPGGLTRVAL GS VVNSSQGGGSKDTWVLAP+ + Sbjct 442 GDRLGPRHIDLRPFAVNDGSRIWVLPGGLTRVALPRGSFVVNSSQGGGSKDTWVLAPQLA 501 Query 504 AAAR 507 R Sbjct 502 DGER 505 >gi|111223940|ref|YP_714734.1| hypothetical protein FRAAL4547 [Frankia alni ACN14a] gi|111151472|emb|CAJ63189.1| Conserved hypothetical protein [Frankia alni ACN14a] Length=559 Score = 625 bits (1612), Expect = 5e-177, Method: Compositional matrix adjust. Identities = 318/495 (65%), Positives = 379/495 (77%), Gaps = 6/495 (1%) Query 24 IFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELAPSDASELKARADALGRAFIDQGI 83 +F GY A+DE+F+A R Y +Y L P +++L AR AL RAF D GI Sbjct 4 LFEGYPAEAAATAAWDEVFEASNTPRDVYAALYDALQPLSSADLAARKVALDRAFRDAGI 63 Query 84 TFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALECYLDDIYGDQEILRDGVIPR 143 TF+L G+ERPFPLDLVPR++ EW +ERG+TQRV+ALE +L D+YG E+L DG++PR Sbjct 64 TFNLFGEERPFPLDLVPRLLDGDEWDVIERGVTQRVQALEAFLADVYGPAEVLADGIVPR 123 Query 144 RLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLEDNLRSPSGVSYVMENRR 203 RLV + HFHR A GI PPNGVR HV+GIDLIRD +G FRVLEDN+R PSGVSYV+ENRR Sbjct 124 RLVLTSAHFHRAAHGIDPPNGVRAHVSGIDLIRDEQGGFRVLEDNVRVPSGVSYVIENRR 183 Query 204 TMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADPTVVVLTPGVYNSAYFEHSLL 263 M RVFP LFATHRVR V DYA+HLL ALR +A ADPTVVVLTPGVYNSAYFEH+LL Sbjct 184 AMTRVFPELFATHRVRPVADYATHLLHALRAAAPPEVADPTVVVLTPGVYNSAYFEHALL 243 Query 264 ARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQFRADSVLGVAGL 323 ARQMGVELVEGRDL RDN+V MRTTEGE+ V V+YRR+DD +LDPL FR +S++G AGL Sbjct 244 ARQMGVELVEGRDLTVRDNKVTMRTTEGEQPVHVVYRRVDDDWLDPLHFRPESMVGCAGL 303 Query 324 VNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLANVETLRCWLDDEREEV 383 VNAAR G+V +++A+GNGV DDKL+YTYVP +I YYL E+P+L NV+T R D+R V Sbjct 304 VNAARGGHVTIANAVGNGVADDKLMYTYVPELIRYYLGEEPILPNVDTYRLEDPDQRAHV 363 Query 384 LDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRDDPRSWIAQPMMELSTVPTRI 443 LD + LV+KPV+GSGG GIV GP+AS AELA + ++ +DPR WIAQ +++LST PT Sbjct 364 LDHLDTLVVKPVDGSGGKGIVIGPQASDAELAELRVRVSEDPRGWIAQRVVKLSTSPTLT 423 Query 444 EGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRVVNSSQGGGSKDTWVLA---- 499 + L PR+VDLRPFAVNDG +VWVLPGGLTRVAL GS VVNSSQGGGSKDTWVLA Sbjct 424 DDRLGPRHVDLRPFAVNDGTKVWVLPGGLTRVALPRGSLVVNSSQGGGSKDTWVLAAERN 483 Query 500 PRASA--AARELGAA 512 PR A AR GAA Sbjct 484 PREPALPMARPPGAA 498 >gi|288920571|ref|ZP_06414877.1| protein of unknown function DUF404 [Frankia sp. EUN1f] gi|288348064|gb|EFC82335.1| protein of unknown function DUF404 [Frankia sp. EUN1f] Length=483 Score = 625 bits (1612), Expect = 7e-177, Method: Compositional matrix adjust. Identities = 310/477 (65%), Positives = 373/477 (79%), Gaps = 0/477 (0%) Query 24 IFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELAPSDASELKARADALGRAFIDQGI 83 +F GY V A A+DE+FD R Y ++ L P +++L AR AL RAF D GI Sbjct 4 LFEGYAAEVVAAAAWDEVFDPTHRPRDVYSALHDALQPLSSADLAARKVALDRAFRDAGI 63 Query 84 TFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALECYLDDIYGDQEILRDGVIPR 143 TF+L G+ERPFPLDLVPR++S EW +ERG+ QRV+ALE +L D+YG E+L DG++PR Sbjct 64 TFNLFGEERPFPLDLVPRLLSGDEWEVIERGVVQRVRALEAFLADVYGPAEVLADGIVPR 123 Query 144 RLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLEDNLRSPSGVSYVMENRR 203 RLV S HFHR A G+ PPNGVR HV+GIDL+RD GDFRVLEDN+R PSGVSYV+ENRR Sbjct 124 RLVLSSSHFHRAAHGVDPPNGVRAHVSGIDLVRDENGDFRVLEDNVRVPSGVSYVIENRR 183 Query 204 TMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADPTVVVLTPGVYNSAYFEHSLL 263 M RVFP LFATHRVR V DYA+HLL ALR +A ADPTVVVLTPGVYN+AYFEH+LL Sbjct 184 AMTRVFPELFATHRVRPVADYATHLLHALRAAAPPEVADPTVVVLTPGVYNAAYFEHALL 243 Query 264 ARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQFRADSVLGVAGL 323 ARQMGVELVEGRDL R+N+V MRTTEGE+ V VIYRR+DD +LDPL FR +S++G AGL Sbjct 244 ARQMGVELVEGRDLSVRNNRVTMRTTEGEQPVHVIYRRVDDDWLDPLHFRPESMVGCAGL 303 Query 324 VNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLANVETLRCWLDDEREEV 383 +N ARAGNV +++A+GNGV DDKL+YTYVP +I YYL E+P+L N++T R D+R V Sbjct 304 LNVARAGNVTIANAVGNGVADDKLMYTYVPDLIRYYLGEEPVLRNIDTFRLEEPDQRAHV 363 Query 384 LDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRDDPRSWIAQPMMELSTVPTRI 443 LD + LV+KPV+GSGG GIV GP+A++AELA + ++ DPR WIAQP+++LST PT Sbjct 364 LDNLDALVVKPVDGSGGKGIVIGPQATEAELAELRARVLGDPRGWIAQPVVKLSTSPTLA 423 Query 444 EGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRVVNSSQGGGSKDTWVLAP 500 L PR+VDLRPFAVNDGN +WVLPGGLTRVAL GS VVNSSQGGGSKDTWVLAP Sbjct 424 GDRLGPRHVDLRPFAVNDGNRIWVLPGGLTRVALPRGSLVVNSSQGGGSKDTWVLAP 480 >gi|336177739|ref|YP_004583114.1| hypothetical protein FsymDg_1744 [Frankia symbiont of Datisca glomerata] gi|334858719|gb|AEH09193.1| protein of unknown function DUF404 [Frankia symbiont of Datisca glomerata] Length=570 Score = 619 bits (1597), Expect = 3e-175, Method: Compositional matrix adjust. Identities = 330/551 (60%), Positives = 388/551 (71%), Gaps = 27/551 (4%) Query 24 IFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELAPSDASELKARADALGRAFIDQGI 83 +F GY A+DE+F+A R Y +Y L P +S+L AR AL RAF D GI Sbjct 4 LFEGYAAQ--ATQAWDEVFEAPDTPRPLYASLYDALRPLSSSDLAARKAALDRAFRDAGI 61 Query 84 TFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALECYLDDIYGDQEILRDGVIPR 143 TF+L G+ERPFPLDLVPR++ EW +ERG+TQRV+ALE +L DIYG E+L DG++PR Sbjct 62 TFNLFGEERPFPLDLVPRLLDNSEWDVIERGVTQRVRALEAFLTDIYGRAEVLADGIVPR 121 Query 144 RLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLEDNLRSPSGVSYVMENRR 203 RLV S HFHR A GI PPNGVR HV+GIDLIRD +G FRVLEDN+R PSGVSYV+ENRR Sbjct 122 RLVLSSAHFHRAAHGIDPPNGVRAHVSGIDLIRDEQGGFRVLEDNVRVPSGVSYVVENRR 181 Query 204 TMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADPTVVVLTPGVYNSAYFEHSLL 263 M RVFP LFATHRVR V DYA+HLL ALR +A + ADPTVVVLTPGVYN AYFEH+LL Sbjct 182 AMTRVFPELFATHRVRPVADYATHLLHALRAAAPPDVADPTVVVLTPGVYNPAYFEHALL 241 Query 264 ARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQFRADSVLGVAGL 323 ARQMGVELVEGRDL +N V MRTTEG+R V V+YRRIDD +LDPL FR +SV+G AGL Sbjct 242 ARQMGVELVEGRDLTVHNNNVTMRTTEGDRPVHVVYRRIDDDWLDPLHFRPESVVGCAGL 301 Query 324 VNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLANVETLRCWLDDEREEV 383 +NAARAG V +++A+GNGV DDKL+YTYVP +I YYL E+P+LANV+T R D+R+ V Sbjct 302 LNAARAGRVTIANAVGNGVADDKLMYTYVPDLIRYYLGEEPVLANVDTYRLEDPDQRDHV 361 Query 384 LDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRDDPRSWIAQPMMELSTVPTRI 443 L + ELVLKPV+GSGG GIV G +AS AEL A+ KI DPR WIAQ ++ LST PT Sbjct 362 LGHLDELVLKPVDGSGGKGIVIGEQASAAELDALRLKIEADPRGWIAQRVVRLSTSPTLA 421 Query 444 EGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRVVNSSQGGGSKDTWVLA---- 499 L PR+VDLRPFAVNDG VWVLPGGLTRVAL GS VVNSSQGGGSKDTWVLA Sbjct 422 GDRLGPRHVDLRPFAVNDGRRVWVLPGGLTRVALPRGSLVVNSSQGGGSKDTWVLASPES 481 Query 500 ------PRASAAARELGAAQIVRSLPQPLCD---------------PTVDASGYEPHDQQ 538 PR+ A P P CD P+ DA + Q+ Sbjct 482 SRESISPRSRPPGNVPQVADGPDVGPFPSCDQQQQQQQQREGPQPRPSQDAGPGQGQRQE 541 Query 539 PQQQQQQQQQA 549 P+Q Q + Q+ Sbjct 542 PRQGQSEHGQS 552 >gi|119960999|ref|YP_947876.1| hypothetical protein AAur_2132 [Arthrobacter aurescens TC1] gi|119947858|gb|ABM06769.1| putative Domain of unknown function (DUF404/DUF407) [Arthrobacter aurescens TC1] Length=530 Score = 609 bits (1570), Expect = 5e-172, Method: Compositional matrix adjust. Identities = 297/495 (60%), Positives = 371/495 (75%), Gaps = 10/495 (2%) Query 24 IFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELAPSDASELKARADALGRAFIDQGI 83 +F Y+ + + A+DEMF + R Y + L +++ ARAD++ R F+D+G+ Sbjct 16 LFQDYSEAAARSGAYDEMFAQGHVARRSYGQVSGALRELSLADVTARADSMARTFLDRGV 75 Query 84 TFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALECYLDDIYGDQEILRDGVIPR 143 TF +G+ERPFPLD+VPRVI A EW LERG+ QRVKALE +L+D+YG ++ DGVIPR Sbjct 76 TFDYAGEERPFPLDIVPRVIPADEWNVLERGVAQRVKALEAFLNDVYGRMAVVTDGVIPR 135 Query 144 RLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLEDNLRSPSGVSYVMENRR 203 +LVT+ HFHR G P GVR+HV+GID++RD G FRVLEDN+R PSGVSYV+ENRR Sbjct 136 QLVTTSAHFHRAVHGFEPSGGVRVHVSGIDVVRDAAGTFRVLEDNVRVPSGVSYVLENRR 195 Query 204 TMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADPTVVVLTPGVYNSAYFEHSLL 263 MA+ P F +R V++Y LL ALR +A DPTVVVLTPGV+NSAYFEH+LL Sbjct 196 AMAKGLPEAFGQQHIRPVEEYPRRLLSALRKTAPAGVDDPTVVVLTPGVFNSAYFEHTLL 255 Query 264 ARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQFRADSVLGVAGL 323 A MGVELVEGRDL CR N+VYMRTT GE++VDVIY+RIDD FLDPLQFR+DS+LG GL Sbjct 256 AGLMGVELVEGRDLICRGNRVYMRTTAGEQRVDVIYKRIDDDFLDPLQFRSDSMLGCPGL 315 Query 324 VNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLANVETLRCWLDDEREEV 383 VNAARAG V +++A+GNGV DDKLVY+YVP +I YYLHE+P++ANV+T R + RE V Sbjct 316 VNAARAGGVTIANAVGNGVADDKLVYSYVPDLIRYYLHEEPIIANVDTFRLEEKEAREHV 375 Query 384 LDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRDDPRSWIAQPMMELSTVPTRI 443 LDR+ ELV+KPV+GSGG G+V GP+A++ EL A+ +++ DPR WIAQP+++LSTVPT Sbjct 376 LDRLDELVVKPVDGSGGKGLVIGPDATKDELDALRKRVIADPRGWIAQPVLQLSTVPTLS 435 Query 444 EGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRVVNSSQGGGSKDTWVLA---- 499 PR+VDLRPFAVNDG++VWVLPGGLTRVAL EGS +VNSSQGGGSKDTWVLA Sbjct 436 GDKFGPRHVDLRPFAVNDGDDVWVLPGGLTRVALKEGSLIVNSSQGGGSKDTWVLADSPQ 495 Query 500 ------PRASAAARE 508 PR S RE Sbjct 496 LPAEIIPRQSVTVRE 510 >gi|116670678|ref|YP_831611.1| hypothetical protein Arth_2131 [Arthrobacter sp. FB24] gi|116610787|gb|ABK03511.1| protein of unknown function DUF404 [Arthrobacter sp. FB24] Length=520 Score = 607 bits (1565), Expect = 2e-171, Method: Compositional matrix adjust. Identities = 296/495 (60%), Positives = 374/495 (76%), Gaps = 10/495 (2%) Query 24 IFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELAPSDASELKARADALGRAFIDQGI 83 +F Y+ + + A+DEMF R Y + L +++ ARAD++ R F+D+G+ Sbjct 6 LFQDYSEAAGRSGAYDEMFTPGQEARKSYGQVAGALRELSLTDVTARADSMARTFLDRGV 65 Query 84 TFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALECYLDDIYGDQEILRDGVIPR 143 TF +G+ERPFPLD+VPRVI A EWT LE+G+ QRV+ALE +L+D+Y ++ DGVIPR Sbjct 66 TFDFAGEERPFPLDIVPRVIPADEWTVLEKGVAQRVRALEAFLNDVYDKMSVVADGVIPR 125 Query 144 RLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLEDNLRSPSGVSYVMENRR 203 +LVT+ HFHRQ G P GVR+H++GID++RD G FRVLEDN+R PSGVSYV+ENRR Sbjct 126 QLVTTSAHFHRQVHGFEPAGGVRVHISGIDVVRDAAGTFRVLEDNVRVPSGVSYVLENRR 185 Query 204 TMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADPTVVVLTPGVYNSAYFEHSLL 263 MA+ P F +R V++Y LL ALR +A + DPTVVVLTPGV+NSAYFEH+LL Sbjct 186 AMAKGLPEAFGQQLIRPVEEYPRRLLSALRKTAPSGVDDPTVVVLTPGVFNSAYFEHTLL 245 Query 264 ARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQFRADSVLGVAGL 323 A MGVELVEGRDL CR N+VYMRTT+GE++VDVIY+RIDD FLDPLQFRADS+LG GL Sbjct 246 AGLMGVELVEGRDLICRGNRVYMRTTDGEQRVDVIYKRIDDDFLDPLQFRADSMLGCPGL 305 Query 324 VNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLANVETLRCWLDDEREEV 383 VNAARAG V +++A+GNGV DDKLVY+YVP +I YYL+E+P++ANV+T R + RE V Sbjct 306 VNAARAGGVTIANAVGNGVADDKLVYSYVPDLIRYYLNEEPVIANVDTFRLEEKEAREHV 365 Query 384 LDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRDDPRSWIAQPMMELSTVPTRI 443 LDR+ ELV+KPV+GSGG G+V GP+AS+ EL A+ +++ DPR WIAQP+++LSTVPT Sbjct 366 LDRLDELVVKPVDGSGGKGLVIGPDASKEELDALRKRVIADPRGWIAQPVLQLSTVPTLS 425 Query 444 EGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRVVNSSQGGGSKDTWVLA---- 499 PR+VDLRPFAVNDG++VWVLPGGLTRVAL EGS +VNSSQGGGSKDTWVL+ Sbjct 426 GDKFGPRHVDLRPFAVNDGDDVWVLPGGLTRVALKEGSLIVNSSQGGGSKDTWVLSDSPE 485 Query 500 ------PRASAAARE 508 PR S A RE Sbjct 486 VPVEALPRPSIAVRE 500 >gi|148271675|ref|YP_001221236.1| hypothetical protein CMM_0496 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147829605|emb|CAN00520.1| conserved hypothetical protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length=571 Score = 602 bits (1551), Expect = 7e-170, Method: Compositional matrix adjust. Identities = 312/541 (58%), Positives = 381/541 (71%), Gaps = 19/541 (3%) Query 24 IFGGYNT------SDVYAMAFDEMF------DAQGIVRGPYKGIYAELAPSDASELKARA 71 +F GY T + AM FDEMF + R Y+ I+A L+ ELK R Sbjct 4 LFEGYGTLAAARRASGGAMPFDEMFRDPPVAGEPAVARAAYREIHAALSRMTKEELKDRT 63 Query 72 DALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALECYLDDIYG 131 DAL +++ QG+TF +G+ERPFPLD VPRVI EW+RLE+G+ QRV+ALE +L D+YG Sbjct 64 DALATSYLAQGVTFDFAGEERPFPLDAVPRVIEQAEWSRLEKGVAQRVRALEAFLADVYG 123 Query 132 DQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLEDNLRS 191 Q +RDGVIP RL++S HFHRQA GI P NGVRI V+GIDL+RD G+ RVLEDN+R Sbjct 124 PQRAIRDGVIPARLISSSSHFHRQAAGIDPANGVRIQVSGIDLVRDEAGEMRVLEDNVRV 183 Query 192 PSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADPTVVVLTPG 251 PSGVSYV+ NRR MA+ P LF + RVR V DY + LL+ALR SA DP VVVLTPG Sbjct 184 PSGVSYVISNRRVMAQTLPELFVSMRVRPVGDYPNKLLQALRASAPDGVEDPNVVVLTPG 243 Query 252 VYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQ 311 VYNSAYFEH+LLAR MGVELVEGRDLFC +V+MRTT G +VDVIYRR+DD FLDPLQ Sbjct 244 VYNSAYFEHTLLARLMGVELVEGRDLFCSGGRVWMRTTGGPMRVDVIYRRVDDEFLDPLQ 303 Query 312 FRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLANVET 371 FRADS+LG GL+ AAR GNV +++A+GNGV DDKLVYTY+P +I YYL E ++ NV+T Sbjct 304 FRADSMLGSPGLMLAARLGNVTIANAVGNGVADDKLVYTYLPDLIRYYLAEDAIIPNVDT 363 Query 372 LRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRDDPRSWIAQ 431 R D EEVLDR+ ELV+KPV+GSGG G+V GP AS ELA + ++ DPR WIAQ Sbjct 364 WRLEEPDSLEEVLDRLPELVVKPVDGSGGKGLVVGPAASAGELAELRARLLKDPRGWIAQ 423 Query 432 PMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRVVNSSQGGG 491 P+++LST+PT +E + PR+ DLRPFAVNDG ++WVLPGGLTRVAL EG VVNSSQGGG Sbjct 424 PVVQLSTIPTLVEDGMRPRHADLRPFAVNDGRDIWVLPGGLTRVALPEGQLVVNSSQGGG 483 Query 492 SKDTWVLAPRA-SAAARE-----LGAAQIVRSLPQPLCDPTVDASGYEPHDQQPQQQQQQ 545 SKDTWV+ AA RE L A Q + P+ A PHD +P+ + Q Sbjct 484 SKDTWVVGDSGFPAATRERSVQTLVADQAAVTTSIPIIQNGEKAPDQSPHD-RPRNRDQH 542 Query 546 Q 546 + Sbjct 543 E 543 >gi|170780706|ref|YP_001709038.1| hypothetical protein CMS_0252 [Clavibacter michiganensis subsp. sepedonicus] gi|169155274|emb|CAQ00375.1| conserved hypothetical protein [Clavibacter michiganensis subsp. sepedonicus] Length=566 Score = 602 bits (1551), Expect = 8e-170, Method: Compositional matrix adjust. Identities = 307/537 (58%), Positives = 378/537 (71%), Gaps = 12/537 (2%) Query 24 IFGGYNT------SDVYAMAFDEMF------DAQGIVRGPYKGIYAELAPSDASELKARA 71 +F GY T + AM FDEMF + R Y+ I+A L+ ELK R Sbjct 4 LFEGYGTLAAARRASGGAMPFDEMFRDPPVAGEPAVARAAYREIHAALSRMTKEELKDRT 63 Query 72 DALGRAFIDQGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALECYLDDIYG 131 DAL +++ QG+TF +G+ERPFPLD VPRVI EW+RLE+G+ QRV+ALE +L D+YG Sbjct 64 DALATSYLAQGVTFDFAGEERPFPLDAVPRVIEQAEWSRLEKGVAQRVRALEAFLADVYG 123 Query 132 DQEILRDGVIPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLEDNLRS 191 Q +RDGVIP RL++S HFHRQA GI P NGVRI V+GIDL+RD G+ RVLEDN+R Sbjct 124 PQRAIRDGVIPARLISSSSHFHRQAAGIDPANGVRIQVSGIDLVRDEAGEMRVLEDNVRV 183 Query 192 PSGVSYVMENRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADPTVVVLTPG 251 PSGVSYV+ NRR MA+ P LF + RVR V DY + LL+ALR SA DP VVVLTPG Sbjct 184 PSGVSYVISNRRVMAQTLPELFVSMRVRPVGDYPNKLLQALRASAPDGVEDPNVVVLTPG 243 Query 252 VYNSAYFEHSLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQ 311 VYNSAYFEH+LLAR MGVELVEGRDLFC +V+MRTT G +VDVIYRR+DD FLDPLQ Sbjct 244 VYNSAYFEHTLLARLMGVELVEGRDLFCSGGRVWMRTTGGPMRVDVIYRRVDDEFLDPLQ 303 Query 312 FRADSVLGVAGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLANVET 371 FRADS+LG GL+ AAR GNV +++A+GNGV DDKLVYTY+P +I YYL E ++ NV+T Sbjct 304 FRADSMLGSPGLMLAARLGNVTIANAVGNGVADDKLVYTYLPDLIRYYLAEDAIIPNVDT 363 Query 372 LRCWLDDEREEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRDDPRSWIAQ 431 R D EEVLDR+ ELV+KPV+GSGG G+V GP AS ELA + ++ DPR WIAQ Sbjct 364 WRLEEPDSLEEVLDRLPELVVKPVDGSGGKGLVVGPAASAGELAELRARLLKDPRGWIAQ 423 Query 432 PMMELSTVPTRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRVVNSSQGGG 491 P+++LST+PT +E + PR+ DLRPFAVNDG ++WVLPGGLTRVAL EG VVNSSQGGG Sbjct 424 PVVQLSTIPTLVEDGMRPRHADLRPFAVNDGRDIWVLPGGLTRVALPEGQLVVNSSQGGG 483 Query 492 SKDTWVLAPRASAAARELGAAQIVRSLPQPLCDPTVDASGYEPHDQQPQQQQQQQQQ 548 SKDTWV+ AA + Q + + + SG + DQ P + + + Q Sbjct 484 SKDTWVVGGSGFPAATRERSVQTLVADQAAVTTSIPIVSGEKAPDQSPHDRPRNRDQ 540 >gi|88856624|ref|ZP_01131280.1| hypothetical protein A20C1_10595 [marine actinobacterium PHSC20C1] gi|88814085|gb|EAR23951.1| hypothetical protein A20C1_10595 [marine actinobacterium PHSC20C1] Length=555 Score = 601 bits (1549), Expect = 1e-169, Method: Compositional matrix adjust. Identities = 295/479 (62%), Positives = 363/479 (76%), Gaps = 3/479 (0%) Query 24 IFGGYNTSD---VYAMAFDEMFDAQGIVRGPYKGIYAELAPSDASELKARADALGRAFID 80 +F GY +S A+DEMF A +R PY+ I+ LA EL+ R +AL +++ Sbjct 4 LFDGYTSSASKRTGPAAWDEMFSADSEIRRPYREIHDALAQMTQEELRGRTEALADSYLA 63 Query 81 QGITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALECYLDDIYGDQEILRDGV 140 QG+TF +G+ERPFPLD VPRVI EW ++E G+ QRV+ALE +L DIYG Q ++DGV Sbjct 64 QGVTFDFAGEERPFPLDPVPRVIDLSEWRQVESGVKQRVRALEAFLADIYGPQNAIKDGV 123 Query 141 IPRRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLEDNLRSPSGVSYVME 200 IP R++TS HFHRQA GI P NGVRI V+GIDLIRD G +RVLEDN+R PSGVSYV+ Sbjct 124 IPARMITSSSHFHRQAAGIEPANGVRIQVSGIDLIRDEVGAWRVLEDNVRVPSGVSYVIS 183 Query 201 NRRTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADPTVVVLTPGVYNSAYFEH 260 NRR MA+ P LF + RVR V DY LL+ALR SA + +PTVVVLTPGVYNSAYFEH Sbjct 184 NRRVMAQTLPELFVSMRVRPVGDYPHKLLQALRASAPSGIEEPTVVVLTPGVYNSAYFEH 243 Query 261 SLLARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQFRADSVLGV 320 +LLAR MGVELVEGRDLFC +V+MRTT G +VDVIYRR+DD FLDPLQFRADS+LG Sbjct 244 TLLARLMGVELVEGRDLFCSGGRVWMRTTAGPTRVDVIYRRVDDEFLDPLQFRADSMLGS 303 Query 321 AGLVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLANVETLRCWLDDER 380 G++ AAR GNV +++A+GNGV DDKLVYTY+P + EYYL EK ++ NV+T R Sbjct 304 PGMMLAARLGNVTIANAVGNGVADDKLVYTYLPDLTEYYLGEKAIIPNVQTWRLEDPGAL 363 Query 381 EEVLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRDDPRSWIAQPMMELSTVP 440 EEVLDR+ ELV+KPV+GSGG G+V GP AS+ ELA + ++R DPR WIAQP+++LST+P Sbjct 364 EEVLDRLDELVVKPVDGSGGKGLVIGPAASKDELATLKTQLRKDPRGWIAQPVVQLSTIP 423 Query 441 TRIEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRVVNSSQGGGSKDTWVLA 499 T ++ + PR+ DLRPFAVNDG++VWVLPGGLTRVAL EG VVNSSQGGGSKDTWV+ Sbjct 424 TVVDDGMRPRHADLRPFAVNDGSDVWVLPGGLTRVALPEGQLVVNSSQGGGSKDTWVVG 482 >gi|336115926|ref|YP_004570692.1| hypothetical protein MLP_02750 [Microlunatus phosphovorus NM-1] gi|334683704|dbj|BAK33289.1| hypothetical protein MLP_02750 [Microlunatus phosphovorus NM-1] Length=551 Score = 599 bits (1544), Expect = 5e-169, Method: Compositional matrix adjust. Identities = 291/465 (63%), Positives = 354/465 (77%), Gaps = 0/465 (0%) Query 35 AMAFDEMFDAQGIVRGPYKGIYAELAPSDASELKARADALGRAFIDQGITFSLSGQERPF 94 +AFDEM DA G VR Y +Y L S A EL++ A++L + G+TF + G ERPF Sbjct 11 GIAFDEMIDADGAVRAAYSTVYETLRRSSADELRSIAESLANNYTQAGVTFDVGGVERPF 70 Query 95 PLDLVPRVISAPEWTRLERGITQRVKALECYLDDIYGDQEILRDGVIPRRLVTSCEHFHR 154 PLD+VPRVI A +W ++ G+ QR++ALE +L D+Y D ++ DGVIPR+L+TS H+HR Sbjct 71 PLDVVPRVIPADDWEIIDSGVAQRIRALEAFLADVYADGRVMTDGVIPRQLITSSSHYHR 130 Query 155 QAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLEDNLRSPSGVSYVMENRRTMARVFPNLFA 214 GI PPNGVR+HV GIDLIR GD RVLEDN+R PSGVSYVM NR M P F Sbjct 131 AVWGIQPPNGVRVHVGGIDLIRTPDGDVRVLEDNVRVPSGVSYVMTNRSAMVTAMPEAFG 190 Query 215 THRVRAVDDYASHLLRALRNSAATNEADPTVVVLTPGVYNSAYFEHSLLARQMGVELVEG 274 T R+R V Y LL ALR +A DPTVVVLTPGVYNSAYFEH+LLAR MGVELVEG Sbjct 191 TQRIRPVAGYPQRLLAALRKAAPYGIDDPTVVVLTPGVYNSAYFEHTLLARTMGVELVEG 250 Query 275 RDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQFRADSVLGVAGLVNAARAGNVVL 334 RDL C+ +VYMRTT G R+VDVIYRRIDD F+DP+ FR+DS+LGV GL+NA R+G V L Sbjct 251 RDLECQRGRVYMRTTAGLRRVDVIYRRIDDDFIDPVHFRSDSMLGVTGLLNAVRSGGVTL 310 Query 335 SSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLANVETLRCWLDDEREEVLDRIRELVLKP 394 ++AIGNGV DDKL+YTYVP +I YYL+E+P++ NV+T R DD REEV+DR+ ELV+KP Sbjct 311 ANAIGNGVADDKLIYTYVPDLIRYYLNEEPIIRNVDTWRLEEDDAREEVMDRLDELVVKP 370 Query 395 VEGSGGYGIVFGPEASQAELAAVSQKIRDDPRSWIAQPMMELSTVPTRIEGTLAPRYVDL 454 V+GSGG GIV GP AS ELAA+ +++ DDPR WIAQP+++LSTVPT I L PR+VDL Sbjct 371 VDGSGGKGIVIGPHASAEELAALRRRVTDDPRGWIAQPLVQLSTVPTLIGSGLEPRHVDL 430 Query 455 RPFAVNDGNEVWVLPGGLTRVALVEGSRVVNSSQGGGSKDTWVLA 499 RPFAVN G+++WVLPGGLTRVAL +G VVNSSQGGGSKDTWVL+ Sbjct 431 RPFAVNSGDDIWVLPGGLTRVALPKGELVVNSSQGGGSKDTWVLS 475 >gi|220912637|ref|YP_002487946.1| hypothetical protein Achl_1882 [Arthrobacter chlorophenolicus A6] gi|219859515|gb|ACL39857.1| protein of unknown function DUF404 [Arthrobacter chlorophenolicus A6] Length=518 Score = 599 bits (1544), Expect = 5e-169, Method: Compositional matrix adjust. Identities = 295/495 (60%), Positives = 367/495 (75%), Gaps = 10/495 (2%) Query 24 IFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELAPSDASELKARADALGRAFIDQGI 83 +F Y+ + A+DEMF R Y+ + L +++ ARAD++ R F+D+G+ Sbjct 4 LFQDYSEAAGRTGAYDEMFAPGQQARPSYEQVADALRKLSLADVSARADSMARTFLDRGV 63 Query 84 TFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALECYLDDIYGDQEILRDGVIPR 143 TF +G+ERPFPLD+VPRVI A EW +ERG+ QRV+ALE +L+D+Y ++ DGVIPR Sbjct 64 TFDFAGEERPFPLDIVPRVIPAAEWDVMERGVAQRVRALEAFLNDVYDKMTVVSDGVIPR 123 Query 144 RLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLEDNLRSPSGVSYVMENRR 203 +LVT+ HFHRQ G P GVR+H++GID++RD G FRVLEDN+R PSGVSYV+ENRR Sbjct 124 QLVTTSAHFHRQVHGFEPAGGVRVHISGIDVVRDAAGTFRVLEDNVRVPSGVSYVLENRR 183 Query 204 TMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADPTVVVLTPGVYNSAYFEHSLL 263 MA+ P F +R V++Y LL ALR +A + DPTVVVLTPGV+NSAYFEH+LL Sbjct 184 AMAKGLPEAFGQQLIRPVEEYPRRLLSALRKTAPSGVDDPTVVVLTPGVFNSAYFEHTLL 243 Query 264 ARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQFRADSVLGVAGL 323 A MGVELVEGRDL CR N+VYMRTT GE++VDVIY+RIDD FLDPLQFRADS+LG GL Sbjct 244 AGLMGVELVEGRDLICRGNRVYMRTTAGEQRVDVIYKRIDDDFLDPLQFRADSMLGCPGL 303 Query 324 VNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLANVETLRCWLDDEREEV 383 VNAARAG V +++A+GNGV DDKLVY+YVP +I YYL E+P++ANV+T R + RE Sbjct 304 VNAARAGGVTIANAVGNGVADDKLVYSYVPDLIRYYLSEEPIIANVDTFRLEEKEAREYT 363 Query 384 LDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRDDPRSWIAQPMMELSTVPTRI 443 LD + ELV+KPV+GSGG G+V GP+AS EL A+ Q+I DPR WIAQP+++LSTVPT Sbjct 364 LDNLAELVVKPVDGSGGKGLVIGPDASNDELDALRQRIIADPRGWIAQPVLQLSTVPTLS 423 Query 444 EGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRVVNSSQGGGSKDTWVLA---- 499 PR+VDLRPFAVNDG+ VWVLPGGLTRVAL EGS +VNSSQGGGSKDTWVLA Sbjct 424 GDKFGPRHVDLRPFAVNDGDNVWVLPGGLTRVALKEGSLIVNSSQGGGSKDTWVLADSPQ 483 Query 500 ------PRASAAARE 508 PR S + RE Sbjct 484 MPVESVPRQSISVRE 498 >gi|325963241|ref|YP_004241147.1| hypothetical protein Asphe3_18570 [Arthrobacter phenanthrenivorans Sphe3] gi|323469328|gb|ADX73013.1| uncharacterized conserved protein [Arthrobacter phenanthrenivorans Sphe3] Length=520 Score = 598 bits (1542), Expect = 9e-169, Method: Compositional matrix adjust. Identities = 295/495 (60%), Positives = 366/495 (74%), Gaps = 10/495 (2%) Query 24 IFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELAPSDASELKARADALGRAFIDQGI 83 +F Y+ + A+DEMF R Y + L +++ ARAD++ R F+D+G+ Sbjct 6 LFQDYSVAAGRTGAYDEMFAPGQQARDSYGQVADALRKLSLADVSARADSMARTFLDRGV 65 Query 84 TFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALECYLDDIYGDQEILRDGVIPR 143 TF +G+ERPFPLD+VPRVI A EW LERG+ QRV+ALE +L+D+Y ++ DGVIPR Sbjct 66 TFDFAGEERPFPLDIVPRVIPAAEWDVLERGVAQRVRALEAFLNDVYDKMTVVSDGVIPR 125 Query 144 RLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLEDNLRSPSGVSYVMENRR 203 +LVT+ HFHRQ G P GVR+H++GID++RD G FRVLEDN+R PSGVSYV+ENRR Sbjct 126 QLVTTSAHFHRQVHGFEPAGGVRVHISGIDVVRDAAGTFRVLEDNVRVPSGVSYVLENRR 185 Query 204 TMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADPTVVVLTPGVYNSAYFEHSLL 263 MA+ P F +R V++Y LL ALR +A DPTVVVLTPGV+NSAYFEH+LL Sbjct 186 AMAKGLPEAFGQQLIRPVEEYPRRLLSALRKTAPAGVDDPTVVVLTPGVFNSAYFEHTLL 245 Query 264 ARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQFRADSVLGVAGL 323 A MGVELVEGRDL CR N+VYMRTT GE++VDVIY+RIDD FLDPLQFRADS+LG GL Sbjct 246 AGLMGVELVEGRDLICRGNRVYMRTTAGEQRVDVIYKRIDDDFLDPLQFRADSMLGCPGL 305 Query 324 VNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLANVETLRCWLDDEREEV 383 VNAARAG V +++A+GNGV DDKLVY+YVP +I YYL E+P++ANV+T R + RE Sbjct 306 VNAARAGGVTIANAVGNGVADDKLVYSYVPDLIRYYLSEEPIIANVDTYRLEEKEAREYT 365 Query 384 LDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRDDPRSWIAQPMMELSTVPTRI 443 LD + ELV+KPV+GSGG G+V GP+AS+ EL A+ Q++ DPR WIAQP+++LSTVPT Sbjct 366 LDNLSELVVKPVDGSGGKGLVIGPDASKDELDALRQRVIADPRGWIAQPVLQLSTVPTLS 425 Query 444 EGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRVVNSSQGGGSKDTWVLA---- 499 PR+VDLRPFAVNDG+ VWVLPGGLTRVAL EGS +VNSSQGGGSKDTWVLA Sbjct 426 GDKFGPRHVDLRPFAVNDGDNVWVLPGGLTRVALKEGSLIVNSSQGGGSKDTWVLADSPQ 485 Query 500 ------PRASAAARE 508 PR S + RE Sbjct 486 MPVETVPRPSISLRE 500 >gi|258654683|ref|YP_003203839.1| hypothetical protein Namu_4571 [Nakamurella multipartita DSM 44233] gi|258557908|gb|ACV80850.1| protein of unknown function DUF404 [Nakamurella multipartita DSM 44233] Length=545 Score = 592 bits (1527), Expect = 4e-167, Method: Compositional matrix adjust. Identities = 293/493 (60%), Positives = 363/493 (74%), Gaps = 12/493 (2%) Query 34 YAMAFDEMFDAQGIVRGPYKGIYAELAPSDASELKARADALGRAFIDQGITFSLSGQERP 93 +A A+DEMF A G +R Y+ ++A L DA++LKARAD +GR F+DQGITF+L G ERP Sbjct 10 FARAWDEMFAAPGEIRPAYESVFAALQTMDAADLKARADIMGRTFLDQGITFALGGVERP 69 Query 94 FPLDLVPRVISAPEWTRLERGITQRVKALECYLDDIYGDQEILRDGVIPRRLVTSCEHFH 153 FPLDL+PR+++A EW +E+G+ QRV+ALE +L D+YG I DGV+P+RLVT+ HFH Sbjct 70 FPLDLIPRIVTAAEWQTVEKGVPQRVRALEAFLADVYGQGRIFTDGVVPKRLVTTSPHFH 129 Query 154 RQAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLEDNLRSPSGVSYVMENRRTMARVFPNLF 213 RQ +G+ +G R+ ++G+DLIRD +G+FRVLEDN+R PSGVSYV+ENR+ +A+V Sbjct 130 RQVMGMSAQDGARVVISGVDLIRDEKGEFRVLEDNVRVPSGVSYVLENRQAVAQVLSEAG 189 Query 214 ATHRVRAVDDYASHLLRALRNSAATNEADPTVVVLTPGVYNSAYFEHSLLARQMGVELVE 273 A VR V +Y LL ALR A N DP VVVLTPGVYNSAYFEH+LLAR+MGVELVE Sbjct 190 ADQLVRPVSEYPGQLLAALRAVAPWNVTDPNVVVLTPGVYNSAYFEHTLLAREMGVELVE 249 Query 274 GRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQFRADSVLGVAGLVNAARAGNVV 333 GRDL CR+N+V++RTT E V VIYRRIDD FLDP+QFRADS+LG GL+NAARAGN+ Sbjct 250 GRDLICRNNRVFLRTTSSEMPVHVIYRRIDDEFLDPMQFRADSLLGSPGLINAARAGNLT 309 Query 334 LSSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLANVETLRCWLDDEREEVLDRIRELVLK 393 +++A+GNG+ DDKLVYTYVP +I YYL E+P+L NV+T R + D RE L+ + ELVLK Sbjct 310 IANAVGNGIADDKLVYTYVPDIIRYYLSEEPILQNVDTYRMEVPDHREYALEHLAELVLK 369 Query 394 PVEGSGGYGIVFGPEASQAELAAVSQKIRDDPRSWIAQPMMELSTVPTRIEGTLAPRYVD 453 PV+GSGG GIV G A +A L + I ++PR WIAQ + LSTVPT I + PR+VD Sbjct 370 PVDGSGGKGIVIGSRADRAVLRKARETILENPRGWIAQREIALSTVPTLIGEKMRPRHVD 429 Query 454 LRPFAVNDGNEVWVLPGGLTRVALVEGSRVVNSSQGGGSKDTWVLAPRASAAARELGAAQ 513 LRPFAVN+G VWVLPGGLTRVAL EG VVNSSQGGGSKDTWVL Sbjct 430 LRPFAVNNGRSVWVLPGGLTRVALPEGELVVNSSQGGGSKDTWVL------------GGP 477 Query 514 IVRSLPQPLCDPT 526 I PQP D T Sbjct 478 IPEPEPQPAADAT 490 >gi|336320339|ref|YP_004600307.1| hypothetical protein Celgi_1220 [Cellvibrio gilvus ATCC 13127] gi|336103920|gb|AEI11739.1| protein of unknown function DUF404 [Cellvibrio gilvus ATCC 13127] Length=533 Score = 585 bits (1507), Expect = 1e-164, Method: Compositional matrix adjust. Identities = 299/515 (59%), Positives = 374/515 (73%), Gaps = 13/515 (2%) Query 35 AMAFDEMFDAQGIVRGPYKGIYAELAPSDASELKARADALGRAFIDQGITFSLSGQERPF 94 +A+DEM + R Y+ ++A LA A EL+ RADAL R+++ QG+TF +G+ERPF Sbjct 11 GVAWDEMLEPSAGPRAAYRQVHAALAQLSAGELRGRADALARSYLTQGVTFDFAGEERPF 70 Query 95 PLDLVPRVISAPEWTRLERGITQRVKALECYLDDIYGDQEILRDGVIPRRLVTSCEHFHR 154 PLD+VPRVI+ EW + G+ QRV+ALE +L D+YG Q + DGV+PR ++ S H+HR Sbjct 71 PLDVVPRVIAGDEWEHVAPGVAQRVRALEAFLADVYGPQNAVADGVLPRSVIVSSTHYHR 130 Query 155 QAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLEDNLRSPSGVSYVMENRRTMARVFPNLFA 214 GI PPNGVR+HV+GIDL+RD +RVLEDN+R PSGVSYV+ NRR MA+ FP LFA Sbjct 131 AVRGIAPPNGVRVHVSGIDLVRDSLDGWRVLEDNVRVPSGVSYVLSNRRAMAQSFPELFA 190 Query 215 THRVRAVDDYASHLLRALRNSAATNEADPTVVVLTPGVYNSAYFEHSLLARQMGVELVEG 274 R+R V DY LL AL +A DPTVVVLTPGV+NSAYFEHSLLAR MGVELVEG Sbjct 191 ALRIRPVADYPRRLLAALMAAAPAGVDDPTVVVLTPGVFNSAYFEHSLLARTMGVELVEG 250 Query 275 RDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQFRADSVLGVAGLVNAARAGNVVL 334 RDLFC +V+MRTT+G R+VDVIYRR+DD FLDP+ FRADS+LG GL+ AR G V + Sbjct 251 RDLFCSGGRVWMRTTQGRRRVDVIYRRVDDEFLDPVTFRADSLLGSPGLMTCARNGTVTI 310 Query 335 SSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLANVETLRCWLDDEREEVLDRIRELVLKP 394 ++A+GNGV DDKLVYTYVP +I YYL E+P+LANV+T R EEVLDR+ ELV+KP Sbjct 311 ANAVGNGVADDKLVYTYVPDLIRYYLGEEPVLANVDTWRLEEPGALEEVLDRLDELVVKP 370 Query 395 VEGSGGYGIVFGPEASQAELAAVSQKIRDDPRSWIAQPMMELSTVPTRIEGTLAPRYVDL 454 V+GSGG G+V GP AS+ ELAA+ ++ DPR WIAQP+++LST+PT +E L PR+ DL Sbjct 371 VDGSGGKGLVVGPAASRDELAALRARLIADPRGWIAQPVVQLSTIPTLVEDGLRPRHTDL 430 Query 455 RPFAVNDGNEVWVLPGGLTRVALVEGSRVVNSSQGGGSKDTWVLA---PRASAAARELGA 511 RPFA+NDG +VWVLPGGLTRVAL EG VVNSSQGGGSKDTWVL PR + A + Sbjct 431 RPFAINDGTDVWVLPGGLTRVALPEGRLVVNSSQGGGSKDTWVLGDAPPRRATAVPQAHP 490 Query 512 AQIVRSLPQPLCDPTVDASGYEPHDQQPQQQQQQQ 546 + ++P +DA+ P D + QQQQ Sbjct 491 VPVSNAVP-------IDAN---PQDIRAHVMQQQQ 515 >gi|326330358|ref|ZP_08196668.1| hypothetical protein NBCG_01793 [Nocardioidaceae bacterium Broad-1] gi|325951895|gb|EGD43925.1| hypothetical protein NBCG_01793 [Nocardioidaceae bacterium Broad-1] Length=498 Score = 583 bits (1502), Expect = 4e-164, Method: Compositional matrix adjust. Identities = 295/477 (62%), Positives = 362/477 (76%), Gaps = 4/477 (0%) Query 23 RIFGGYNTSDVYAMAFDEMFDAQGIVRGPYKGIYAELAPSDASELKARADALGRAFIDQG 82 ++F Y T D AFDEMF A G +R PY+ + L ASEL +R +A+ +++DQG Sbjct 3 QMFDAYETRD---PAFDEMF-AGGELRPPYQRLGDSLRRLSASELISRVEAMQASYLDQG 58 Query 83 ITFSLSGQERPFPLDLVPRVISAPEWTRLERGITQRVKALECYLDDIYGDQEILRDGVIP 142 +TF + G+ER FPLD+VPRVI WT +++G+ QRVKALE +L D+Y + ++ DGVIP Sbjct 59 VTFDIGGEERAFPLDIVPRVIERDAWTTIDKGVQQRVKALELFLADVYDEGKVFEDGVIP 118 Query 143 RRLVTSCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLEDNLRSPSGVSYVMENR 202 R ++T+ H+HR A G+ PPNGVR+ V+GIDL+RD+ G+FRVLEDN+R PSGVSYVM NR Sbjct 119 REVITTSSHYHRAAAGVHPPNGVRVQVSGIDLVRDNAGEFRVLEDNVRVPSGVSYVMTNR 178 Query 203 RTMARVFPNLFATHRVRAVDDYASHLLRALRNSAATNEADPTVVVLTPGVYNSAYFEHSL 262 R ++ P A HR+R V +Y LL ALR +A ADPTVVVLTPGVYN AYFEH+L Sbjct 179 RAISAALPETIAEHRIRPVANYPQKLLAALRAAAPAGVADPTVVVLTPGVYNGAYFEHAL 238 Query 263 LARQMGVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQFRADSVLGVAG 322 LAR MGVELVEGRDL CR+ QV MRTT+G V VIYRRIDD FLDP+ FR DS+LG G Sbjct 239 LARTMGVELVEGRDLVCRNGQVLMRTTKGLAPVHVIYRRIDDEFLDPVHFRPDSMLGCVG 298 Query 323 LVNAARAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLANVETLRCWLDDEREE 382 L++AAR GNV L++A+GNGV DDKLVYTY+P +I YYL E P++ NV+T R REE Sbjct 299 LIDAARMGNVTLANAVGNGVADDKLVYTYMPDIIRYYLAEDPIIKNVDTWRMGDATSREE 358 Query 383 VLDRIRELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRDDPRSWIAQPMMELSTVPTR 442 VLDR+ ELVLKPV+GSGG GIV GP AS EL + KI DDPRSWIAQP+++LSTVPT Sbjct 359 VLDRLDELVLKPVDGSGGKGIVIGPAASARELEVLRGKILDDPRSWIAQPVVQLSTVPTF 418 Query 443 IEGTLAPRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRVVNSSQGGGSKDTWVLA 499 I+G L R+VDLRPFAVNDG++VWVLPGGLTRVAL EG +VNSS+GGGSKDTWVLA Sbjct 419 IDGDLGARHVDLRPFAVNDGDKVWVLPGGLTRVALAEGELIVNSSRGGGSKDTWVLA 475 >gi|323358427|ref|YP_004224823.1| hypothetical protein MTES_1979 [Microbacterium testaceum StLB037] gi|323274798|dbj|BAJ74943.1| uncharacterized conserved protein [Microbacterium testaceum StLB037] Length=594 Score = 582 bits (1500), Expect = 6e-164, Method: Compositional matrix adjust. Identities = 292/491 (60%), Positives = 365/491 (75%), Gaps = 13/491 (2%) Query 37 AFDEMFDAQGIVRGP---------YKGIYAELAPSDASELKARADALGRAFIDQGITFSL 87 AFDEMF G+ P Y+ +Y LA EL+ R ++L +++ QG+TF Sbjct 23 AFDEMF---GVPASPGEAAPSREAYRELYQTLAQMTQEELRGRTESLASSYLAQGVTFDF 79 Query 88 SGQERPFPLDLVPRVISAPEWTRLERGITQRVKALECYLDDIYGDQEILRDGVIPRRLVT 147 +G+ERPFPLD VPRVI+ EW+R+E G+ QRV+ALE +LDD YG+Q +RDG++P L++ Sbjct 80 AGEERPFPLDAVPRVIAYDEWSRIEAGVKQRVRALEAFLDDAYGNQHCVRDGILPAGLIS 139 Query 148 SCEHFHRQAVGIVPPNGVRIHVAGIDLIRDHRGDFRVLEDNLRSPSGVSYVMENRRTMAR 207 S ++F+RQA GI NGVRI V+GIDLIRD G+ RVLEDN+R PSGVSYV+ NRR MA+ Sbjct 140 SSQYFYRQAAGIRSANGVRIQVSGIDLIRDEHGEMRVLEDNVRVPSGVSYVISNRRVMAQ 199 Query 208 VFPNLFATHRVRAVDDYASHLLRALRNSAATNEADPTVVVLTPGVYNSAYFEHSLLARQM 267 P LF + RVR V DY + LL ALR SA DP +VVLTPGVYNSAYFEH+LLAR M Sbjct 200 TLPELFVSMRVRPVGDYPNKLLAALRASAPPGIDDPNIVVLTPGVYNSAYFEHTLLARLM 259 Query 268 GVELVEGRDLFCRDNQVYMRTTEGERQVDVIYRRIDDAFLDPLQFRADSVLGVAGLVNAA 327 GVELVEGRDL C +V+MRTT G ++VDVIYRR+DD FLDPLQFRADS+LG GL+ AA Sbjct 260 GVELVEGRDLLCIGGKVFMRTTRGPQRVDVIYRRVDDDFLDPLQFRADSMLGAPGLMLAA 319 Query 328 RAGNVVLSSAIGNGVGDDKLVYTYVPTMIEYYLHEKPLLANVETLRCWLDDEREEVLDRI 387 R GNV +++A+GNGV DDKL+YTYVP +I YYL E+P+L NV+T R EEVLDR+ Sbjct 320 RLGNVTIANAVGNGVADDKLLYTYVPDLIRYYLAEEPILKNVDTWRLEDPGALEEVLDRL 379 Query 388 RELVLKPVEGSGGYGIVFGPEASQAELAAVSQKIRDDPRSWIAQPMMELSTVPTRIEGTL 447 ELV+KPV+GSGG G+V GP+AS AEL A+ +++ DPR WIAQP++ LST+PT +E + Sbjct 380 PELVVKPVDGSGGKGLVVGPDASPAELDALRKRLLADPRGWIAQPVVMLSTIPTLVEDGM 439 Query 448 APRYVDLRPFAVNDGNEVWVLPGGLTRVALVEGSRVVNSSQGGGSKDTWVLAPRASAAAR 507 PR+ DLRPFAVNDG+++WVLPGGLTRVAL EG VVNSSQGGGSKDTWV+ A+ + Sbjct 440 RPRHADLRPFAVNDGDDIWVLPGGLTRVALPEGQLVVNSSQGGGSKDTWVVG-GAAPSHV 498 Query 508 ELGAAQIVRSL 518 E G Q V L Sbjct 499 EYGQGQGVSGL 509 Lambda K H 0.320 0.137 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1222700780868 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40