BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2412

Length=86
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15609549|ref|NP_216928.1|  30S ribosomal protein S20 [Mycobact...   159    1e-37
gi|340627423|ref|YP_004745875.1|  putative 30S ribosomal protein ...   158    3e-37
gi|41408322|ref|NP_961158.1|  30S ribosomal protein S20 [Mycobact...   154    4e-36
gi|342857812|ref|ZP_08714468.1|  30S ribosomal protein S20 [Mycob...   153    7e-36
gi|240170818|ref|ZP_04749477.1|  30S ribosomal protein S20 [Mycob...   152    2e-35
gi|296170532|ref|ZP_06852116.1|  trigger factor [Mycobacterium pa...   150    5e-35
gi|118618944|ref|YP_907276.1|  30S ribosomal protein S20 [Mycobac...   150    7e-35
gi|254819867|ref|ZP_05224868.1|  30S ribosomal protein S20 [Mycob...   149    9e-35
gi|15827246|ref|NP_301509.1|  30S ribosomal protein S20 [Mycobact...   144    5e-33
gi|333990143|ref|YP_004522757.1|  30S ribosomal protein S20 RpsT ...   139    2e-31
gi|108800476|ref|YP_640673.1|  30S ribosomal protein S20 [Mycobac...   133    9e-30
gi|169628724|ref|YP_001702373.1|  30s ribosomal protein S20 [Myco...   129    2e-28
gi|145223252|ref|YP_001133930.1|  30S ribosomal protein S20 [Myco...   129    2e-28
gi|118467555|ref|YP_888840.1|  30S ribosomal protein S20 [Mycobac...   128    2e-28
gi|120404866|ref|YP_954695.1|  30S ribosomal protein S20 [Mycobac...   127    4e-28
gi|296140494|ref|YP_003647737.1|  30S ribosomal protein S20 [Tsuk...   121    3e-26
gi|326381590|ref|ZP_08203284.1|  30S ribosomal protein S20 [Gordo...   120    6e-26
gi|54023363|ref|YP_117605.1|  30S ribosomal protein S20 [Nocardia...   120    1e-25
gi|319949558|ref|ZP_08023605.1|  30S ribosomal protein S20 [Dietz...   119    1e-25
gi|262203075|ref|YP_003274283.1|  30S ribosomal protein S20 [Gord...   119    2e-25
gi|343926801|ref|ZP_08766294.1|  30S ribosomal protein S20 [Gordo...   114    3e-24
gi|333918817|ref|YP_004492398.1|  30S ribosomal protein S20 [Amyc...   114    4e-24
gi|111018295|ref|YP_701267.1|  30S ribosomal protein S20 [Rhodoco...   114    6e-24
gi|226360419|ref|YP_002778197.1|  30S ribosomal protein S20 [Rhod...   113    7e-24
gi|226307254|ref|YP_002767214.1|  30S ribosomal protein S20 [Rhod...   113    9e-24
gi|256375345|ref|YP_003099005.1|  30S ribosomal protein S20 [Acti...   113    9e-24
gi|289751017|ref|ZP_06510395.1|  LOW QUALITY PROTEIN: 30S ribosom...   112    2e-23
gi|21221022|ref|NP_626801.1|  30S ribosomal protein S20 [Streptom...   110    6e-23
gi|302519010|ref|ZP_07271352.1|  ribosomal protein S20 [Streptomy...   110    8e-23
gi|256396178|ref|YP_003117742.1|  30S ribosomal protein S20 [Cate...   110    1e-22
gi|256832780|ref|YP_003161507.1|  30S ribosomal protein S20 [Jone...   109    1e-22
gi|291451267|ref|ZP_06590657.1|  30S ribosomal protein S20 [Strep...   108    2e-22
gi|29832103|ref|NP_826737.1|  30S ribosomal protein S20 [Streptom...   108    3e-22
gi|291439722|ref|ZP_06579112.1|  30S ribosomal protein S20 [Strep...   108    3e-22
gi|295838950|ref|ZP_06825883.1|  ribosomal protein S20 [Streptomy...   107    4e-22
gi|330469612|ref|YP_004407355.1|  30S ribosomal protein S20 [Verr...   107    5e-22
gi|302869313|ref|YP_003837950.1|  30S ribosomal protein S20 [Micr...   107    5e-22
gi|258651780|ref|YP_003200936.1|  30S ribosomal protein S20 [Naka...   107    6e-22
gi|271963809|ref|YP_003338005.1|  30S ribosomal protein S20 [Stre...   107    6e-22
gi|290960525|ref|YP_003491707.1|  30s ribosomal protein S20 [Stre...   107    6e-22
gi|111221438|ref|YP_712232.1|  30S ribosomal protein S20 [Frankia...   107    8e-22
gi|334337471|ref|YP_004542623.1|  30S ribosomal protein S20 [Isop...   105    2e-21
gi|72161231|ref|YP_288888.1|  30S ribosomal protein S20P [Thermob...   105    2e-21
gi|238060578|ref|ZP_04605287.1|  30S ribosomal protein S20 [Micro...   105    3e-21
gi|294629293|ref|ZP_06707853.1|  30S ribosomal protein S20 [Strep...   105    3e-21
gi|302551348|ref|ZP_07303690.1|  ribosomal protein S20 [Streptomy...   105    3e-21
gi|317507853|ref|ZP_07965554.1|  ribosomal protein S20 [Segnilipa...   104    4e-21
gi|300788522|ref|YP_003768813.1|  30S ribosomal protein S20 [Amyc...   104    4e-21
gi|312140319|ref|YP_004007655.1|  30S ribosomal protein s20 rpst ...   103    7e-21
gi|302528888|ref|ZP_07281230.1|  ribosomal protein S20 [Streptomy...   103    7e-21


>gi|15609549|ref|NP_216928.1| 30S ribosomal protein S20 [Mycobacterium tuberculosis H37Rv]
 gi|15841930|ref|NP_336967.1| 30S ribosomal protein S20 [Mycobacterium tuberculosis CDC1551]
 gi|31793591|ref|NP_856084.1| 30S ribosomal protein S20 [Mycobacterium bovis AF2122/97]
 77 more sequence titles
 Length=86

 Score =  159 bits (403),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 85/86 (99%), Positives = 86/86 (100%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK
Sbjct  1   MANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           AASKGVIHKNQAANKKSALAQALNKL
Sbjct  61  AASKGVIHKNQAANKKSALAQALNKL  86


>gi|340627423|ref|YP_004745875.1| putative 30S ribosomal protein S20 RPST [Mycobacterium canettii 
CIPT 140010059]
 gi|340005613|emb|CCC44777.1| putative 30S ribosomal protein S20 RPST [Mycobacterium canettii 
CIPT 140010059]
Length=86

 Score =  158 bits (399),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 84/86 (98%), Positives = 85/86 (99%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDK KAAELLASTNRKLDK
Sbjct  1   MANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKEKAAELLASTNRKLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           AASKGVIHKNQAANKKSALAQALNKL
Sbjct  61  AASKGVIHKNQAANKKSALAQALNKL  86


>gi|41408322|ref|NP_961158.1| 30S ribosomal protein S20 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|118464716|ref|YP_880995.1| 30S ribosomal protein S20 [Mycobacterium avium 104]
 gi|254774588|ref|ZP_05216104.1| 30S ribosomal protein S20 [Mycobacterium avium subsp. avium ATCC 
25291]
 6 more sequence titles
 Length=86

 Score =  154 bits (389),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 81/86 (95%), Positives = 84/86 (98%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQQKRN+TNERARLRNK+VKSSLRTAVRAFREAAHAGDK KAAELL STNRKLDK
Sbjct  1   MANIKSQQKRNKTNERARLRNKSVKSSLRTAVRAFREAAHAGDKEKAAELLVSTNRKLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           AASKGVIHKNQAANKKSALAQALNKL
Sbjct  61  AASKGVIHKNQAANKKSALAQALNKL  86


>gi|342857812|ref|ZP_08714468.1| 30S ribosomal protein S20 [Mycobacterium colombiense CECT 3035]
 gi|342135145|gb|EGT88311.1| 30S ribosomal protein S20 [Mycobacterium colombiense CECT 3035]
Length=86

 Score =  153 bits (387),  Expect = 7e-36, Method: Compositional matrix adjust.
 Identities = 80/86 (94%), Positives = 84/86 (98%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQQKRN+TNERARLRNK+VKSSLRTAVRAFREAAHAGDK KAAELL STNRKLDK
Sbjct  1   MANIKSQQKRNKTNERARLRNKSVKSSLRTAVRAFREAAHAGDKEKAAELLVSTNRKLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           AASKGVIHKNQAANKKSALAQALNK+
Sbjct  61  AASKGVIHKNQAANKKSALAQALNKI  86


>gi|240170818|ref|ZP_04749477.1| 30S ribosomal protein S20 [Mycobacterium kansasii ATCC 12478]
Length=87

 Score =  152 bits (383),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 80/86 (94%), Positives = 83/86 (97%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQQKRNRTNERARLRNK+VKSSLRTAVRAFREAAHAGDK KAAELL STNRKLDK
Sbjct  1   MANIKSQQKRNRTNERARLRNKSVKSSLRTAVRAFREAAHAGDKEKAAELLVSTNRKLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           AASKGVIHKNQAANKKSALA+ LNKL
Sbjct  61  AASKGVIHKNQAANKKSALARTLNKL  86


>gi|296170532|ref|ZP_06852116.1| trigger factor [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295894764|gb|EFG74489.1| trigger factor [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=86

 Score =  150 bits (379),  Expect = 5e-35, Method: Compositional matrix adjust.
 Identities = 79/86 (92%), Positives = 83/86 (97%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQQKRNRTNERARLRNK+VKSSLRTAVRAFREA HAGDK KA ELLA+TNRKLDK
Sbjct  1   MANIKSQQKRNRTNERARLRNKSVKSSLRTAVRAFREATHAGDKEKATELLAATNRKLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           AASKGVIHKNQAANKKSALA+ALNKL
Sbjct  61  AASKGVIHKNQAANKKSALARALNKL  86


>gi|118618944|ref|YP_907276.1| 30S ribosomal protein S20 [Mycobacterium ulcerans Agy99]
 gi|183983713|ref|YP_001852004.1| 30S ribosomal protein S20 RpsT [Mycobacterium marinum M]
 gi|166223954|sp|A0PTY6.1|RS20_MYCUA RecName: Full=30S ribosomal protein S20
 gi|226736526|sp|B2HMC9.1|RS20_MYCMM RecName: Full=30S ribosomal protein S20
 gi|118571054|gb|ABL05805.1| 30S ribosomal protein S20 RpsT [Mycobacterium ulcerans Agy99]
 gi|183177039|gb|ACC42149.1| 30S ribosomal protein S20 RpsT [Mycobacterium marinum M]
Length=87

 Score =  150 bits (378),  Expect = 7e-35, Method: Compositional matrix adjust.
 Identities = 78/86 (91%), Positives = 84/86 (98%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQQKRNRTNERARLRNK+VKSSLRTAVR+FR+AAH+GDK KAAELL STNRKLDK
Sbjct  1   MANIKSQQKRNRTNERARLRNKSVKSSLRTAVRSFRDAAHSGDKEKAAELLVSTNRKLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           AASKGVIHKNQAANKKSALA+ALNKL
Sbjct  61  AASKGVIHKNQAANKKSALARALNKL  86


>gi|254819867|ref|ZP_05224868.1| 30S ribosomal protein S20 [Mycobacterium intracellulare ATCC 
13950]
Length=86

 Score =  149 bits (377),  Expect = 9e-35, Method: Compositional matrix adjust.
 Identities = 79/86 (92%), Positives = 82/86 (96%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQQKRN+TNERARLRNK+VKSSLRTAVRAFREA  AGDK KAAELL STNRKLDK
Sbjct  1   MANIKSQQKRNKTNERARLRNKSVKSSLRTAVRAFREATSAGDKEKAAELLVSTNRKLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           AASKGVIHKNQAANKKSALAQALNKL
Sbjct  61  AASKGVIHKNQAANKKSALAQALNKL  86


>gi|15827246|ref|NP_301509.1| 30S ribosomal protein S20 [Mycobacterium leprae TN]
 gi|221229724|ref|YP_002503140.1| 30S ribosomal protein S20 [Mycobacterium leprae Br4923]
 gi|3122815|sp|O33132.1|RS20_MYCLE RecName: Full=30S ribosomal protein S20
 gi|254813092|sp|B8ZUR8.1|RS20_MYCLB RecName: Full=30S ribosomal protein S20
 gi|2398689|emb|CAB16149.1| 30s ribosomal protein s20 [Mycobacterium leprae]
 gi|13092795|emb|CAC30112.1| 30S ribosomal protein S20 [Mycobacterium leprae]
 gi|219932831|emb|CAR70697.1| 30S ribosomal protein S20 [Mycobacterium leprae Br4923]
Length=86

 Score =  144 bits (362),  Expect = 5e-33, Method: Compositional matrix adjust.
 Identities = 75/86 (88%), Positives = 81/86 (95%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           + NIKSQQKRNRTNERARLRNK+VKSSLRTAVRAFREA HAG+K KAA+LL ST+RKLDK
Sbjct  1   MTNIKSQQKRNRTNERARLRNKSVKSSLRTAVRAFREAVHAGEKEKAAKLLVSTSRKLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           AASKGVIHKNQAANKKSALA+ LNKL
Sbjct  61  AASKGVIHKNQAANKKSALARTLNKL  86


>gi|333990143|ref|YP_004522757.1| 30S ribosomal protein S20 RpsT [Mycobacterium sp. JDM601]
 gi|333486111|gb|AEF35503.1| 30S ribosomal protein S20 RpsT [Mycobacterium sp. JDM601]
Length=86

 Score =  139 bits (349),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 73/86 (85%), Positives = 80/86 (94%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KRNRTNERARLRN++VKS++RTA+RAFREAA AGDK KA ELL ST RKLDK
Sbjct  1   MANIKSQVKRNRTNERARLRNQSVKSAVRTAIRAFREAAEAGDKEKAGELLLSTGRKLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           AASKGVIHKNQAANKKSALA+ALNKL
Sbjct  61  AASKGVIHKNQAANKKSALARALNKL  86


>gi|108800476|ref|YP_640673.1| 30S ribosomal protein S20 [Mycobacterium sp. MCS]
 gi|119869614|ref|YP_939566.1| 30S ribosomal protein S20 [Mycobacterium sp. KMS]
 gi|126436099|ref|YP_001071790.1| 30S ribosomal protein S20 [Mycobacterium sp. JLS]
 6 more sequence titles
 Length=86

 Score =  133 bits (334),  Expect = 9e-30, Method: Compositional matrix adjust.
 Identities = 71/86 (83%), Positives = 78/86 (91%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ+KR RTNER RLRN++VKSSLRTAVR FREA  AGDK KAAELL +T+RKLDK
Sbjct  1   MANIKSQEKRIRTNERRRLRNQSVKSSLRTAVRGFREALDAGDKDKAAELLVATSRKLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           AASKGVIHKNQAANKKSAL+ ALNKL
Sbjct  61  AASKGVIHKNQAANKKSALSVALNKL  86


>gi|169628724|ref|YP_001702373.1| 30s ribosomal protein S20 [Mycobacterium abscessus ATCC 19977]
 gi|226736524|sp|B1MN07.1|RS20_MYCA9 RecName: Full=30S ribosomal protein S20
 gi|169240691|emb|CAM61719.1| 30s ribosomal protein S20 [Mycobacterium abscessus]
Length=86

 Score =  129 bits (323),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 68/86 (80%), Positives = 74/86 (87%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ+KR RTNERARLRN+A KSSLRTA+R  REA   GDK KA ELL ST+RKLDK
Sbjct  1   MANIKSQEKRIRTNERARLRNQATKSSLRTAIRGLREAIAEGDKEKAGELLVSTSRKLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           A +KGVIHKNQAANKKSALA ALNKL
Sbjct  61  AVTKGVIHKNQAANKKSALALALNKL  86


>gi|145223252|ref|YP_001133930.1| 30S ribosomal protein S20 [Mycobacterium gilvum PYR-GCK]
 gi|315443712|ref|YP_004076591.1| 30S ribosomal protein S20P [Mycobacterium sp. Spyr1]
 gi|189044871|sp|A4T2G0.1|RS20_MYCGI RecName: Full=30S ribosomal protein S20
 gi|145215738|gb|ABP45142.1| SSU ribosomal protein S20P [Mycobacterium gilvum PYR-GCK]
 gi|315262015|gb|ADT98756.1| SSU ribosomal protein S20P [Mycobacterium sp. Spyr1]
Length=86

 Score =  129 bits (323),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 68/86 (80%), Positives = 76/86 (89%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQQKR  TNER RLRNK+VKSSL TAVR FREA  +GDK KA ELL +T+RKLDK
Sbjct  1   MANIKSQQKRILTNERRRLRNKSVKSSLHTAVRGFREAVESGDKEKAGELLLATSRKLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           AASKGVIHKNQAAN+KSALA+ALNK+
Sbjct  61  AASKGVIHKNQAANRKSALARALNKI  86


>gi|118467555|ref|YP_888840.1| 30S ribosomal protein S20 [Mycobacterium smegmatis str. MC2 155]
 gi|166223950|sp|A0R102.1|RS20_MYCS2 RecName: Full=30S ribosomal protein S20
 gi|118168842|gb|ABK69738.1| ribosomal protein S20 [Mycobacterium smegmatis str. MC2 155]
Length=86

 Score =  128 bits (322),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 69/86 (81%), Positives = 76/86 (89%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KR RTNER RLRN++VKSSLRTA+R FREA  AGDK KA+ELL +T+RKLDK
Sbjct  1   MANIKSQIKRIRTNERRRLRNQSVKSSLRTAIRGFREAVDAGDKDKASELLHATSRKLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           AASKGVIH NQAANKKSALA ALNKL
Sbjct  61  AASKGVIHPNQAANKKSALALALNKL  86


>gi|120404866|ref|YP_954695.1| 30S ribosomal protein S20 [Mycobacterium vanbaalenii PYR-1]
 gi|166223955|sp|A1TBY9.1|RS20_MYCVP RecName: Full=30S ribosomal protein S20
 gi|119957684|gb|ABM14689.1| SSU ribosomal protein S20P [Mycobacterium vanbaalenii PYR-1]
Length=86

 Score =  127 bits (320),  Expect = 4e-28, Method: Compositional matrix adjust.
 Identities = 69/86 (81%), Positives = 75/86 (88%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQQKR  TNER RLRNK+VKSSL TAVR FR A  AGDK KA ELLAST+RKLDK
Sbjct  1   MANIKSQQKRILTNERRRLRNKSVKSSLHTAVRGFRAAVEAGDKDKAGELLASTSRKLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           AASKGVIHKNQAAN+KSALA+AL K+
Sbjct  61  AASKGVIHKNQAANRKSALAKALQKI  86


>gi|296140494|ref|YP_003647737.1| 30S ribosomal protein S20 [Tsukamurella paurometabola DSM 20162]
 gi|296028628|gb|ADG79398.1| ribosomal protein S20 [Tsukamurella paurometabola DSM 20162]
Length=86

 Score =  121 bits (304),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 65/86 (76%), Positives = 74/86 (87%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KR +TNER RLRN++ KSSLRTA+R FREA  AGDK KA  LLAST+++LDK
Sbjct  1   MANIKSQMKRIKTNERNRLRNQSAKSSLRTAIRHFREAVDAGDKDKATTLLASTSQQLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           AASKG+IH NQAANKKSALA ALNKL
Sbjct  61  AASKGIIHANQAANKKSALALALNKL  86


>gi|326381590|ref|ZP_08203284.1| 30S ribosomal protein S20 [Gordonia neofelifaecis NRRL B-59395]
 gi|326199837|gb|EGD57017.1| 30S ribosomal protein S20 [Gordonia neofelifaecis NRRL B-59395]
Length=86

 Score =  120 bits (302),  Expect = 6e-26, Method: Compositional matrix adjust.
 Identities = 62/86 (73%), Positives = 77/86 (90%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KRN+TNE+AR RN+++KS+LRTA+R FRE   +GDK KAAELL +T+R+LDK
Sbjct  1   MANIKSQIKRNKTNEKARQRNQSIKSALRTALRNFRETVASGDKDKAAELLVATSRQLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           AASKGVIHKNQAANKKSA+A A+N+L
Sbjct  61  AASKGVIHKNQAANKKSAMALAVNQL  86


>gi|54023363|ref|YP_117605.1| 30S ribosomal protein S20 [Nocardia farcinica IFM 10152]
 gi|59798617|sp|Q5Z000.1|RS20_NOCFA RecName: Full=30S ribosomal protein S20
 gi|54014871|dbj|BAD56241.1| putative ribosomal protein S20 [Nocardia farcinica IFM 10152]
Length=86

 Score =  120 bits (300),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 66/86 (77%), Positives = 73/86 (85%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KR RTNE AR RN++VKS+LRTA+R+FREAA AGDK KAAE L   +RKLDK
Sbjct  1   MANIKSQMKRIRTNEAARKRNQSVKSALRTAIRSFREAAEAGDKDKAAERLQFASRKLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           AASKGVIH NQAANKKSALA A NKL
Sbjct  61  AASKGVIHPNQAANKKSALALAFNKL  86


>gi|319949558|ref|ZP_08023605.1| 30S ribosomal protein S20 [Dietzia cinnamea P4]
 gi|319436776|gb|EFV91849.1| 30S ribosomal protein S20 [Dietzia cinnamea P4]
Length=86

 Score =  119 bits (299),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 61/86 (71%), Positives = 74/86 (87%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KRNRTNER RLRN++ KS+LRTA+R+ REA  +GDK KA  LL +T+R+LDK
Sbjct  1   MANIKSQIKRNRTNERNRLRNQSTKSALRTAIRSLREATESGDKEKAGALLVATSRQLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           AASKGVIH+NQAANKKSAL +A+N L
Sbjct  61  AASKGVIHQNQAANKKSALTKAVNSL  86


>gi|262203075|ref|YP_003274283.1| 30S ribosomal protein S20 [Gordonia bronchialis DSM 43247]
 gi|262086422|gb|ACY22390.1| ribosomal protein S20 [Gordonia bronchialis DSM 43247]
Length=86

 Score =  119 bits (297),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 64/86 (75%), Positives = 73/86 (85%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KRNRTNE  R RN++VKSSLRTA+R FREA  +GDK KAAEL  + +RKLDK
Sbjct  1   MANIKSQIKRNRTNEERRKRNQSVKSSLRTAIRGFREAVESGDKDKAAELGQAASRKLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           AASKGVIH NQAANKKSA+A A+NKL
Sbjct  61  AASKGVIHANQAANKKSAIALAVNKL  86


>gi|343926801|ref|ZP_08766294.1| 30S ribosomal protein S20 [Gordonia alkanivorans NBRC 16433]
 gi|343763161|dbj|GAA13220.1| 30S ribosomal protein S20 [Gordonia alkanivorans NBRC 16433]
Length=86

 Score =  114 bits (286),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 61/86 (71%), Positives = 73/86 (85%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KRNRTNE+ R RN +VKS+LRT++R+FREA  +GDK KA EL  + +RKLDK
Sbjct  1   MANIKSQIKRNRTNEKNRQRNVSVKSALRTSIRSFREAVESGDKDKATELGQAASRKLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           AASKGVIH NQAANKKSA+A A+NKL
Sbjct  61  AASKGVIHANQAANKKSAIALAVNKL  86


>gi|333918817|ref|YP_004492398.1| 30S ribosomal protein S20 [Amycolicicoccus subflavus DQS3-9A1]
 gi|333481038|gb|AEF39598.1| 30S ribosomal protein S20 [Amycolicicoccus subflavus DQS3-9A1]
Length=87

 Score =  114 bits (286),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 62/86 (73%), Positives = 72/86 (84%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KR RTNER RLRN++VKS+LRTA+R FREAA  GDK +A ELL + +R LDK
Sbjct  1   MANIKSQVKRIRTNERNRLRNQSVKSALRTAIRKFREAAATGDKTEAKELLQAASRHLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           AA+  VIHKNQAANKKSA+AQA NKL
Sbjct  61  AATARVIHKNQAANKKSAMAQAYNKL  86


>gi|111018295|ref|YP_701267.1| 30S ribosomal protein S20 [Rhodococcus jostii RHA1]
 gi|118573838|sp|Q0SH77.1|RS20_RHOSR RecName: Full=30S ribosomal protein S20
 gi|110817825|gb|ABG93109.1| 30S ribosomal protein S20 [Rhodococcus jostii RHA1]
Length=86

 Score =  114 bits (284),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 69/86 (81%), Positives = 78/86 (91%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KR RTNE ARLRN++VKSSLRTA+R+FREAA AGDK KA ELL +T+RKLDK
Sbjct  1   MANIKSQVKRIRTNEAARLRNQSVKSSLRTAIRSFREAAAAGDKDKANELLVATSRKLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           AASKGVIH NQAANKKSALAQA+NK+
Sbjct  61  AASKGVIHANQAANKKSALAQAINKI  86


>gi|226360419|ref|YP_002778197.1| 30S ribosomal protein S20 [Rhodococcus opacus B4]
 gi|254813087|sp|C1AUP4.1|RS20_RHOOB RecName: Full=30S ribosomal protein S20
 gi|226238904|dbj|BAH49252.1| 30S ribosomal protein S20 [Rhodococcus opacus B4]
Length=86

 Score =  113 bits (283),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 69/86 (81%), Positives = 78/86 (91%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KR RTNE ARLRN++VKSSLRTA+R+FREAA AGDK KA ELL +T+RKLDK
Sbjct  1   MANIKSQVKRIRTNEAARLRNQSVKSSLRTAIRSFREAAAAGDKDKANELLVATSRKLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           AASKGVIH NQAANKKSALAQA+NK+
Sbjct  61  AASKGVIHANQAANKKSALAQAVNKI  86


>gi|226307254|ref|YP_002767214.1| 30S ribosomal protein S20 [Rhodococcus erythropolis PR4]
 gi|229493232|ref|ZP_04387024.1| ribosomal protein S20 [Rhodococcus erythropolis SK121]
 gi|259494872|sp|C1A1J0.1|RS20_RHOE4 RecName: Full=30S ribosomal protein S20
 gi|226186371|dbj|BAH34475.1| 30S ribosomal protein S20 [Rhodococcus erythropolis PR4]
 gi|229319963|gb|EEN85792.1| ribosomal protein S20 [Rhodococcus erythropolis SK121]
Length=86

 Score =  113 bits (283),  Expect = 9e-24, Method: Compositional matrix adjust.
 Identities = 70/86 (82%), Positives = 77/86 (90%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KR RTNE ARLRN++VKSSLRTA+R+FREAA AGDK KA ELL ST+RKLDK
Sbjct  1   MANIKSQVKRIRTNEAARLRNQSVKSSLRTAIRSFREAAAAGDKDKANELLVSTSRKLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           AASKGVIH NQAANKKSAL+QA NKL
Sbjct  61  AASKGVIHANQAANKKSALSQAANKL  86


>gi|256375345|ref|YP_003099005.1| 30S ribosomal protein S20 [Actinosynnema mirum DSM 43827]
 gi|255919648|gb|ACU35159.1| ribosomal protein S20 [Actinosynnema mirum DSM 43827]
Length=86

 Score =  113 bits (282),  Expect = 9e-24, Method: Compositional matrix adjust.
 Identities = 61/86 (71%), Positives = 72/86 (84%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KR +TNE+ARLRNKAVKSSL+TA+R FREAA AGDK KA  L+   +RKLDK
Sbjct  1   MANIKSQLKRIKTNEKARLRNKAVKSSLKTAIRKFREAAEAGDKDKALALVQDASRKLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           A SKGVIH NQAANKKSA+A+  N++
Sbjct  61  AVSKGVIHANQAANKKSAMAKRANQI  86


>gi|289751017|ref|ZP_06510395.1| LOW QUALITY PROTEIN: 30S ribosomal protein S20 rpsT [Mycobacterium 
tuberculosis T92]
 gi|289691604|gb|EFD59033.1| LOW QUALITY PROTEIN: 30S ribosomal protein S20 rpsT [Mycobacterium 
tuberculosis T92]
Length=62

 Score =  112 bits (281),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 59/61 (97%), Positives = 61/61 (100%), Gaps = 0/61 (0%)

Query  26  SSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDKAASKGVIHKNQAANKKSALAQALNK  85
           SS+R+AVRAFREAAHAGDKAKAAELLASTNRKLDKAASKGVIHKNQAANKKSALAQALNK
Sbjct  2   SSIRSAVRAFREAAHAGDKAKAAELLASTNRKLDKAASKGVIHKNQAANKKSALAQALNK  61

Query  86  L  86
           L
Sbjct  62  L  62


>gi|21221022|ref|NP_626801.1| 30S ribosomal protein S20 [Streptomyces coelicolor A3(2)]
 gi|289771701|ref|ZP_06531079.1| 30S ribosomal protein S20 [Streptomyces lividans TK24]
 gi|17865608|sp|Q9RDM3.1|RS20_STRCO RecName: Full=30S ribosomal protein S20
 gi|6714669|emb|CAB66241.1| 30s ribosomal protein S20 [Streptomyces coelicolor A3(2)]
 gi|289701900|gb|EFD69329.1| 30S ribosomal protein S20 [Streptomyces lividans TK24]
Length=88

 Score =  110 bits (276),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 61/86 (71%), Positives = 70/86 (82%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KRN+TNE+ARLRNK+VKSSL+TA+R  REAA AGD  KA E     +R+LDK
Sbjct  1   MANIKSQIKRNKTNEKARLRNKSVKSSLKTAIRKAREAAAAGDVEKATEFQRVASRELDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           A SKGVIHKNQAANKKSALAQ +  L
Sbjct  61  AVSKGVIHKNQAANKKSALAQKVGAL  86


>gi|302519010|ref|ZP_07271352.1| ribosomal protein S20 [Streptomyces sp. SPB78]
 gi|318061213|ref|ZP_07979934.1| 30S ribosomal protein S20 [Streptomyces sp. SA3_actG]
 gi|318076117|ref|ZP_07983449.1| 30S ribosomal protein S20 [Streptomyces sp. SA3_actF]
 gi|333027159|ref|ZP_08455223.1| putative 30S ribosomal protein S20 [Streptomyces sp. Tu6071]
 gi|302427905|gb|EFK99720.1| ribosomal protein S20 [Streptomyces sp. SPB78]
 gi|332747011|gb|EGJ77452.1| putative 30S ribosomal protein S20 [Streptomyces sp. Tu6071]
Length=88

 Score =  110 bits (275),  Expect = 8e-23, Method: Compositional matrix adjust.
 Identities = 62/80 (78%), Positives = 66/80 (83%), Gaps = 0/80 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KRN+TNE+ARLRNKAVKSSL+TAVR  REAA AGD  KA EL     RKLDK
Sbjct  1   MANIKSQIKRNKTNEKARLRNKAVKSSLKTAVRKAREAAAAGDVEKAQELTRVATRKLDK  60

Query  61  AASKGVIHKNQAANKKSALA  80
           A S GVIHKNQAANKKSALA
Sbjct  61  AVSSGVIHKNQAANKKSALA  80


>gi|256396178|ref|YP_003117742.1| 30S ribosomal protein S20 [Catenulispora acidiphila DSM 44928]
 gi|256362404|gb|ACU75901.1| ribosomal protein S20 [Catenulispora acidiphila DSM 44928]
Length=88

 Score =  110 bits (274),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 60/86 (70%), Positives = 72/86 (84%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KR +TNE+AR RNKAVKSSL+TA+R  REA  +GD AKA EL  + +R+LDK
Sbjct  1   MANIKSQIKRIKTNEKARQRNKAVKSSLKTAIRKTREAVESGDTAKAQELAQAASRELDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           AASKGVIH NQAANKKSALA+++N L
Sbjct  61  AASKGVIHANQAANKKSALAKSVNGL  86


>gi|256832780|ref|YP_003161507.1| 30S ribosomal protein S20 [Jonesia denitrificans DSM 20603]
 gi|256686311|gb|ACV09204.1| ribosomal protein S20 [Jonesia denitrificans DSM 20603]
Length=86

 Score =  109 bits (272),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 62/86 (73%), Positives = 71/86 (83%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KRNRTNE+ARLRNKAVKS ++T VRA REA  AGDK  A   LA  +RKLDK
Sbjct  1   MANIKSQIKRNRTNEKARLRNKAVKSEVKTYVRAVREAVAAGDKEAAVAALAVASRKLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           AA+KGVIHKNQAAN+KS LA+A+N L
Sbjct  61  AATKGVIHKNQAANRKSGLAKAVNAL  86


>gi|291451267|ref|ZP_06590657.1| 30S ribosomal protein S20 [Streptomyces albus J1074]
 gi|291354216|gb|EFE81118.1| 30S ribosomal protein S20 [Streptomyces albus J1074]
Length=88

 Score =  108 bits (271),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 59/80 (74%), Positives = 67/80 (84%), Gaps = 0/80 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KRN+TNE+ARLRNKAVKSSL+TA+R  REA  AGD  KA E   + +R+LDK
Sbjct  1   MANIKSQIKRNKTNEKARLRNKAVKSSLKTAIRKAREAVAAGDAEKATEYTRAASRQLDK  60

Query  61  AASKGVIHKNQAANKKSALA  80
           A SKGVIHKNQAANKKSALA
Sbjct  61  AVSKGVIHKNQAANKKSALA  80


>gi|29832103|ref|NP_826737.1| 30S ribosomal protein S20 [Streptomyces avermitilis MA-4680]
 gi|59798881|sp|Q82BZ4.1|RS20_STRAW RecName: Full=30S ribosomal protein S20
 gi|29609221|dbj|BAC73272.1| putative ribosomal protein S20 [Streptomyces avermitilis MA-4680]
Length=88

 Score =  108 bits (270),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 61/86 (71%), Positives = 69/86 (81%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KRN+TNE+ARLRNKAVKSSL+TA+R  REAA AGD  KA E   +  R+LDK
Sbjct  1   MANIKSQIKRNKTNEKARLRNKAVKSSLKTAIRKAREAAAAGDVEKATEYQRAAARQLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           A SKGVIHKNQAANKKSALA  +  L
Sbjct  61  AVSKGVIHKNQAANKKSALASKVAPL  86


>gi|291439722|ref|ZP_06579112.1| 30S ribosomal protein S20 [Streptomyces ghanaensis ATCC 14672]
 gi|291342617|gb|EFE69573.1| 30S ribosomal protein S20 [Streptomyces ghanaensis ATCC 14672]
Length=88

 Score =  108 bits (270),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 60/81 (75%), Positives = 66/81 (82%), Gaps = 0/81 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KRN+TNE+ARLRNKAVKSSL+TA+R  REA  AGD  KA E      R+LDK
Sbjct  1   MANIKSQIKRNKTNEKARLRNKAVKSSLKTAIRKAREAVAAGDVEKATEYQRVAARQLDK  60

Query  61  AASKGVIHKNQAANKKSALAQ  81
           A SKGVIHKNQAANKKSALAQ
Sbjct  61  AVSKGVIHKNQAANKKSALAQ  81


>gi|295838950|ref|ZP_06825883.1| ribosomal protein S20 [Streptomyces sp. SPB74]
 gi|197695505|gb|EDY42438.1| ribosomal protein S20 [Streptomyces sp. SPB74]
Length=86

 Score =  107 bits (268),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 60/80 (75%), Positives = 65/80 (82%), Gaps = 0/80 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KRN+TNE+ARLRNKAVKSSL+TA+R  REA  AGD  KA EL     RKLDK
Sbjct  1   MANIKSQIKRNKTNEKARLRNKAVKSSLKTAIRKAREATAAGDVEKAQELTRLATRKLDK  60

Query  61  AASKGVIHKNQAANKKSALA  80
           A S GVIHKNQAANKKSALA
Sbjct  61  AVSSGVIHKNQAANKKSALA  80


>gi|330469612|ref|YP_004407355.1| 30S ribosomal protein S20 [Verrucosispora maris AB-18-032]
 gi|328812583|gb|AEB46755.1| 30S ribosomal protein S20 [Verrucosispora maris AB-18-032]
Length=88

 Score =  107 bits (268),  Expect = 5e-22, Method: Compositional matrix adjust.
 Identities = 57/81 (71%), Positives = 67/81 (83%), Gaps = 0/81 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KRNR NE+ RLRNK+VKSSL+TA+R F EAA AGD  KA  L+   +RKLDK
Sbjct  1   MANIKSQIKRNRQNEKRRLRNKSVKSSLKTAIRKFHEAAEAGDTEKATVLMQEASRKLDK  60

Query  61  AASKGVIHKNQAANKKSALAQ  81
           AASKGVIH NQAAN+KSA+A+
Sbjct  61  AASKGVIHANQAANRKSAIAK  81


>gi|302869313|ref|YP_003837950.1| 30S ribosomal protein S20 [Micromonospora aurantiaca ATCC 27029]
 gi|315504212|ref|YP_004083099.1| 30S ribosomal protein S20 [Micromonospora sp. L5]
 gi|302572172|gb|ADL48374.1| ribosomal protein S20 [Micromonospora aurantiaca ATCC 27029]
 gi|315410831|gb|ADU08948.1| ribosomal protein S20 [Micromonospora sp. L5]
Length=88

 Score =  107 bits (268),  Expect = 5e-22, Method: Compositional matrix adjust.
 Identities = 57/81 (71%), Positives = 66/81 (82%), Gaps = 0/81 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KRNR NE+ RLRNK+VKSSL+TA+R F EAA AGD  KA  L+    RKLDK
Sbjct  1   MANIKSQIKRNRQNEKRRLRNKSVKSSLKTAIRKFHEAAEAGDTEKATVLMREATRKLDK  60

Query  61  AASKGVIHKNQAANKKSALAQ  81
           AASKGVIH NQAAN+KSA+A+
Sbjct  61  AASKGVIHSNQAANRKSAIAK  81


>gi|258651780|ref|YP_003200936.1| 30S ribosomal protein S20 [Nakamurella multipartita DSM 44233]
 gi|258555005|gb|ACV77947.1| ribosomal protein S20 [Nakamurella multipartita DSM 44233]
Length=86

 Score =  107 bits (267),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 60/86 (70%), Positives = 68/86 (80%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KRNRTNE ARLRNK+VKSSL+TAVR  R AA AGDK  A   L +  R LDK
Sbjct  1   MANIKSQIKRNRTNEAARLRNKSVKSSLKTAVRKVRTAAEAGDKTAAEVELKAACRSLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           AASKGVIH NQAAN+KSAL Q +N++
Sbjct  61  AASKGVIHANQAANRKSALTQLVNQV  86


>gi|271963809|ref|YP_003338005.1| 30S ribosomal protein S20 [Streptosporangium roseum DSM 43021]
 gi|270506984|gb|ACZ85262.1| 30S ribosomal protein S20 [Streptosporangium roseum DSM 43021]
Length=90

 Score =  107 bits (267),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 60/86 (70%), Positives = 71/86 (83%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KRNR NE+ARLRNKAVKSSL+TAVR FREAA  G+  +A  L  +  R+LDK
Sbjct  1   MANIKSQIKRNRQNEKARLRNKAVKSSLKTAVRKFREAADQGNVDEAVVLQRAACRQLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           AASKGVIHKNQAAN+KSA+AQ + +L
Sbjct  61  AASKGVIHKNQAANRKSAIAQRVVEL  86


>gi|290960525|ref|YP_003491707.1| 30s ribosomal protein S20 [Streptomyces scabiei 87.22]
 gi|260650051|emb|CBG73167.1| 30s ribosomal protein S20 [Streptomyces scabiei 87.22]
Length=86

 Score =  107 bits (267),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 59/78 (76%), Positives = 65/78 (84%), Gaps = 0/78 (0%)

Query  3   NIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDKAA  62
           NIKSQ KRN+TNE+ARLRNKAVKSSL+TA+R  REAA AGD  KA E   +  R+LDKA 
Sbjct  1   NIKSQIKRNKTNEKARLRNKAVKSSLKTAIRKAREAAAAGDTVKATEYQRAAARQLDKAV  60

Query  63  SKGVIHKNQAANKKSALA  80
           SKGVIHKNQAANKKSALA
Sbjct  61  SKGVIHKNQAANKKSALA  78


>gi|111221438|ref|YP_712232.1| 30S ribosomal protein S20 [Frankia alni ACN14a]
 gi|111148970|emb|CAJ60650.1| 30S ribosomal protein S20 [Frankia alni ACN14a]
Length=103

 Score =  107 bits (266),  Expect = 8e-22, Method: Compositional matrix adjust.
 Identities = 59/82 (72%), Positives = 65/82 (80%), Gaps = 0/82 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           VANIKSQ KRN TNE+ RLRNKAVKS L+T VR FR+A  AGD  +A E L   +RKLDK
Sbjct  15  VANIKSQIKRNLTNEKRRLRNKAVKSELKTHVRRFRDAVEAGDAERAGETLRVASRKLDK  74

Query  61  AASKGVIHKNQAANKKSALAQA  82
           A SKGVIH NQAANKKSALA+A
Sbjct  75  AVSKGVIHPNQAANKKSALARA  96


>gi|334337471|ref|YP_004542623.1| 30S ribosomal protein S20 [Isoptericola variabilis 225]
 gi|334107839|gb|AEG44729.1| 30S ribosomal protein S20 [Isoptericola variabilis 225]
Length=86

 Score =  105 bits (262),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 59/86 (69%), Positives = 68/86 (80%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KR +TNE+ARLRNKAVKS L+T VR  REA  AGDK  AA  L   +RKLDK
Sbjct  1   MANIKSQLKRIKTNEKARLRNKAVKSELKTYVRKVREAVAAGDKEAAAVALREASRKLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           A SKGVIH NQAAN+KSA+A+A+ KL
Sbjct  61  AVSKGVIHANQAANRKSAIAKAVEKL  86


>gi|72161231|ref|YP_288888.1| 30S ribosomal protein S20P [Thermobifida fusca YX]
 gi|118574567|sp|Q47RQ2.1|RS20_THEFY RecName: Full=30S ribosomal protein S20
 gi|71914963|gb|AAZ54865.1| SSU ribosomal protein S20P [Thermobifida fusca YX]
Length=92

 Score =  105 bits (262),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 58/86 (68%), Positives = 72/86 (84%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ+KR R NE+ARLRNKAVKSSL+TA+R FREAA AG+  +A  L  +  R+LDK
Sbjct  1   MANIKSQKKRIRQNEKARLRNKAVKSSLKTAIRKFREAAEAGNVEEAIILQRAAARQLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           A SKGVIHKNQAAN+KSA+A+ L++L
Sbjct  61  AVSKGVIHKNQAANRKSAIAKRLHQL  86


>gi|238060578|ref|ZP_04605287.1| 30S ribosomal protein S20 [Micromonospora sp. ATCC 39149]
 gi|237882389|gb|EEP71217.1| 30S ribosomal protein S20 [Micromonospora sp. ATCC 39149]
Length=88

 Score =  105 bits (261),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 56/81 (70%), Positives = 65/81 (81%), Gaps = 0/81 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KRNR NE+ RLRNK+VKSSL+TAVR F EA  AGD  KA  L+   +RKLDK
Sbjct  1   MANIKSQIKRNRQNEKRRLRNKSVKSSLKTAVRKFNEAVEAGDAEKATALMRDASRKLDK  60

Query  61  AASKGVIHKNQAANKKSALAQ  81
           A SKGVIH NQAAN+KSA+A+
Sbjct  61  AVSKGVIHSNQAANRKSAIAK  81


>gi|294629293|ref|ZP_06707853.1| 30S ribosomal protein S20 [Streptomyces sp. e14]
 gi|292832626|gb|EFF90975.1| 30S ribosomal protein S20 [Streptomyces sp. e14]
Length=88

 Score =  105 bits (261),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 59/80 (74%), Positives = 66/80 (83%), Gaps = 0/80 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KR +TNE+ARLRNKAVKSSL+TA+R  REAA AGD  KA E   +  R+LDK
Sbjct  1   MANIKSQIKRIKTNEKARLRNKAVKSSLKTAIRKAREAAAAGDVEKATEYQRAAARQLDK  60

Query  61  AASKGVIHKNQAANKKSALA  80
           A SKGVIHKNQAANKKSALA
Sbjct  61  AVSKGVIHKNQAANKKSALA  80


>gi|302551348|ref|ZP_07303690.1| ribosomal protein S20 [Streptomyces viridochromogenes DSM 40736]
 gi|302468966|gb|EFL32059.1| ribosomal protein S20 [Streptomyces viridochromogenes DSM 40736]
Length=88

 Score =  105 bits (261),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 59/81 (73%), Positives = 65/81 (81%), Gaps = 0/81 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KR +TNE+ARLRNKAVKSSL+TA+R  REA  AGD  KA E      R+LDK
Sbjct  1   MANIKSQIKRIKTNEKARLRNKAVKSSLKTAIRKAREAVAAGDVEKATEYQRVAARQLDK  60

Query  61  AASKGVIHKNQAANKKSALAQ  81
           A SKGVIHKNQAANKKSALAQ
Sbjct  61  AVSKGVIHKNQAANKKSALAQ  81


>gi|317507853|ref|ZP_07965554.1| ribosomal protein S20 [Segniliparus rugosus ATCC BAA-974]
 gi|316253895|gb|EFV13264.1| ribosomal protein S20 [Segniliparus rugosus ATCC BAA-974]
Length=88

 Score =  104 bits (260),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 57/86 (67%), Positives = 70/86 (82%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KR +TNE AR RN+AV+S+LRTA+R  R +A AG++ KAAELL + NR LDK
Sbjct  1   MANIKSQVKRIKTNEAARQRNQAVRSALRTAIRKVRTSAAAGEREKAAELLVAANRSLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           A SKGVIHKN AAN+KSALA  +NK+
Sbjct  61  AVSKGVIHKNNAANRKSALAILVNKI  86


>gi|300788522|ref|YP_003768813.1| 30S ribosomal protein S20 [Amycolatopsis mediterranei U32]
 gi|299798036|gb|ADJ48411.1| small subunit ribosomal protein S20 [Amycolatopsis mediterranei 
U32]
 gi|340530127|gb|AEK45332.1| 30S ribosomal protein S20 [Amycolatopsis mediterranei S699]
Length=86

 Score =  104 bits (260),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 58/86 (68%), Positives = 69/86 (81%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KR  TNE+AR RN+A++SS++TA+R  REAA AGDKAKA EL     +KLDK
Sbjct  1   MANIKSQIKRITTNEKARQRNQAIRSSVKTAIRKVREAAEAGDKAKAVELQRDAAQKLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           A SKGVIH NQAANKKSALA+ +N L
Sbjct  61  AVSKGVIHANQAANKKSALAKRVNAL  86


>gi|312140319|ref|YP_004007655.1| 30S ribosomal protein s20 rpst [Rhodococcus equi 103S]
 gi|325677105|ref|ZP_08156774.1| 30S ribosomal protein S20 [Rhodococcus equi ATCC 33707]
 gi|311889658|emb|CBH48975.1| 30S ribosomal protein S20 RpsT [Rhodococcus equi 103S]
 gi|325552090|gb|EGD21783.1| 30S ribosomal protein S20 [Rhodococcus equi ATCC 33707]
Length=86

 Score =  103 bits (258),  Expect = 7e-21, Method: Compositional matrix adjust.
 Identities = 65/86 (76%), Positives = 73/86 (85%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KR RTNER RLRN++VKSSLRTA+R+FREAA AGDK KA ELL +T+RKLDK
Sbjct  1   MANIKSQVKRIRTNERNRLRNQSVKSSLRTAIRSFREAAAAGDKDKANELLVATSRKLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           AA  GVIH NQAANKKSALA+  N L
Sbjct  61  AAGAGVIHANQAANKKSALAKVANSL  86


>gi|302528888|ref|ZP_07281230.1| ribosomal protein S20 [Streptomyces sp. AA4]
 gi|302437783|gb|EFL09599.1| ribosomal protein S20 [Streptomyces sp. AA4]
Length=86

 Score =  103 bits (258),  Expect = 7e-21, Method: Compositional matrix adjust.
 Identities = 58/86 (68%), Positives = 68/86 (80%), Gaps = 0/86 (0%)

Query  1   VANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDK  60
           +ANIKSQ KR  TNE+AR RN A++SS++TA+R FREAA AGDK KA EL     RKLDK
Sbjct  1   MANIKSQVKRITTNEKARQRNLAIRSSVKTAIRKFREAAEAGDKDKALELQRDAARKLDK  60

Query  61  AASKGVIHKNQAANKKSALAQALNKL  86
           A +KGVIH NQAANKKSALA+  N+L
Sbjct  61  AVTKGVIHANQAANKKSALAKRANQL  86



Lambda     K      H
   0.309    0.117    0.290 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 131009627400


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40