BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2418c
Length=247
Score E
Sequences producing significant alignments: (Bits) Value
gi|308232125|ref|ZP_07415023.2| hypothetical protein TMAG_02977 ... 496 1e-138
gi|15609555|ref|NP_216934.1| hypothetical protein Rv2418c [Mycob... 494 4e-138
gi|298525900|ref|ZP_07013309.1| conserved hypothetical protein [... 493 1e-137
gi|323719015|gb|EGB28164.1| hypothetical protein TMMG_01710 [Myc... 475 3e-132
gi|342857822|ref|ZP_08714478.1| hypothetical protein MCOL_03070 ... 448 4e-124
gi|254819851|ref|ZP_05224852.1| hypothetical protein MintA_07999... 442 2e-122
gi|240170830|ref|ZP_04749489.1| hypothetical protein MkanA1_1607... 439 3e-121
gi|183983726|ref|YP_001852017.1| hypothetical protein MMAR_3746 ... 437 5e-121
gi|118618957|ref|YP_907289.1| hypothetical protein MUL_3690 [Myc... 437 6e-121
gi|108800493|ref|YP_640690.1| hypothetical protein Mmcs_3527 [My... 433 1e-119
gi|126436109|ref|YP_001071800.1| hypothetical protein Mjls_3532 ... 430 9e-119
gi|118463634|ref|YP_880978.1| hypothetical protein MAV_1753 [Myc... 430 1e-118
gi|41408339|ref|NP_961175.1| hypothetical protein MAP2241c [Myco... 429 2e-118
gi|336458223|gb|EGO37204.1| hypothetical protein MAPs_15180 [Myc... 427 7e-118
gi|296170513|ref|ZP_06852099.1| conserved hypothetical protein [... 422 2e-116
gi|118471453|ref|YP_888847.1| hypothetical protein MSMEG_4578 [M... 404 6e-111
gi|333990130|ref|YP_004522744.1| hypothetical protein JDM601_149... 395 2e-108
gi|145223243|ref|YP_001133921.1| hypothetical protein Mflv_2656 ... 395 3e-108
gi|120404877|ref|YP_954706.1| hypothetical protein Mvan_3923 [My... 370 1e-100
gi|169628714|ref|YP_001702363.1| hypothetical protein MAB_1624 [... 350 1e-94
gi|111018304|ref|YP_701276.1| hypothetical protein RHA1_ro01294 ... 312 2e-83
gi|226307260|ref|YP_002767220.1| hypothetical protein RER_37730 ... 306 2e-81
gi|229493216|ref|ZP_04387008.1| conserved hypothetical protein [... 304 7e-81
gi|226360430|ref|YP_002778208.1| hypothetical protein ROP_10160 ... 303 2e-80
gi|54023346|ref|YP_117588.1| hypothetical protein nfa13790 [Noca... 300 2e-79
gi|312140324|ref|YP_004007660.1| hypothetical protein REQ_29640 ... 280 2e-73
gi|326381583|ref|ZP_08203277.1| hypothetical protein SCNU_01490 ... 253 2e-65
gi|296393429|ref|YP_003658313.1| hypothetical protein Srot_1009 ... 249 3e-64
gi|333918812|ref|YP_004492393.1| hypothetical protein AS9A_1141 ... 249 3e-64
gi|317506546|ref|ZP_07964342.1| hypothetical protein HMPREF9336_... 241 7e-62
gi|343926809|ref|ZP_08766302.1| hypothetical protein GOALK_072_0... 239 4e-61
gi|262203081|ref|YP_003274289.1| hypothetical protein Gbro_3191 ... 222 4e-56
gi|296140499|ref|YP_003647742.1| hypothetical protein Tpau_2805 ... 214 6e-54
gi|302528896|ref|ZP_07281238.1| conserved hypothetical protein [... 206 2e-51
gi|257055301|ref|YP_003133133.1| hypothetical protein Svir_12570... 203 2e-50
gi|300788529|ref|YP_003768820.1| hypothetical protein AMED_6692 ... 197 9e-49
gi|256375338|ref|YP_003098998.1| hypothetical protein Amir_1200 ... 192 3e-47
gi|331695849|ref|YP_004332088.1| hypothetical protein Psed_2007 ... 174 1e-41
gi|325000184|ref|ZP_08121296.1| hypothetical protein PseP1_15518... 80.9 1e-13
gi|325000736|ref|ZP_08121848.1| hypothetical protein PseP1_18292... 79.7 4e-13
gi|289669549|ref|ZP_06490624.1| restriction endonuclease-like pr... 44.3 0.016
gi|288573444|ref|ZP_06391801.1| lipolytic protein G-D-S-L family... 39.7 0.41
gi|89894130|ref|YP_517617.1| hypothetical protein DSY1384 [Desul... 38.1 1.3
gi|219668528|ref|YP_002458963.1| non-specific serine/threonine p... 38.1 1.3
gi|308185962|ref|YP_003930093.1| acyl-CoA thioesterase I [Pantoe... 36.6 3.5
gi|170096602|ref|XP_001879521.1| predicted protein [Laccaria bic... 36.6 3.9
gi|342874040|gb|EGU76115.1| hypothetical protein FOXB_13361 [Fus... 35.4 7.2
gi|124267423|ref|YP_001021427.1| 3-demethylubiquinone-9 3-methyl... 35.4 7.6
gi|327541560|gb|EGF28091.1| arylesterase protein [Rhodopirellula... 35.4 8.2
gi|220934702|ref|YP_002513601.1| 3-demethylubiquinone-9 3-O-meth... 35.0 9.9
>gi|308232125|ref|ZP_07415023.2| hypothetical protein TMAG_02977 [Mycobacterium tuberculosis SUMu001]
gi|308369711|ref|ZP_07418797.2| hypothetical protein TMBG_00961 [Mycobacterium tuberculosis SUMu002]
gi|308371008|ref|ZP_07423532.2| hypothetical protein TMCG_00517 [Mycobacterium tuberculosis SUMu003]
19 more sequence titles
Length=275
Score = 496 bits (1277), Expect = 1e-138, Method: Compositional matrix adjust.
Identities = 247/247 (100%), Positives = 247/247 (100%), Gaps = 0/247 (0%)
Query 1 MSSRRGRRPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDV 60
MSSRRGRRPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDV
Sbjct 29 MSSRRGRRPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDV 88
Query 61 WWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAW 120
WWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAW
Sbjct 89 WWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAW 148
Query 121 VQPRLSPVARAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAG 180
VQPRLSPVARAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAG
Sbjct 149 VQPRLSPVARAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAG 208
Query 181 TVAAITEWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEAGV 240
TVAAITEWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEAGV
Sbjct 209 TVAAITEWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEAGV 268
Query 241 PNEKSRG 247
PNEKSRG
Sbjct 269 PNEKSRG 275
>gi|15609555|ref|NP_216934.1| hypothetical protein Rv2418c [Mycobacterium tuberculosis H37Rv]
gi|15841937|ref|NP_336974.1| hypothetical protein MT2491 [Mycobacterium tuberculosis CDC1551]
gi|31793597|ref|NP_856090.1| hypothetical protein Mb2441c [Mycobacterium bovis AF2122/97]
53 more sequence titles
Length=247
Score = 494 bits (1273), Expect = 4e-138, Method: Compositional matrix adjust.
Identities = 247/247 (100%), Positives = 247/247 (100%), Gaps = 0/247 (0%)
Query 1 MSSRRGRRPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDV 60
MSSRRGRRPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDV
Sbjct 1 MSSRRGRRPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDV 60
Query 61 WWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAW 120
WWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAW
Sbjct 61 WWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAW 120
Query 121 VQPRLSPVARAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAG 180
VQPRLSPVARAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAG
Sbjct 121 VQPRLSPVARAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAG 180
Query 181 TVAAITEWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEAGV 240
TVAAITEWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEAGV
Sbjct 181 TVAAITEWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEAGV 240
Query 241 PNEKSRG 247
PNEKSRG
Sbjct 241 PNEKSRG 247
>gi|298525900|ref|ZP_07013309.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|298495694|gb|EFI30988.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=247
Score = 493 bits (1268), Expect = 1e-137, Method: Compositional matrix adjust.
Identities = 246/247 (99%), Positives = 246/247 (99%), Gaps = 0/247 (0%)
Query 1 MSSRRGRRPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDV 60
MSSRRGRRPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDV
Sbjct 1 MSSRRGRRPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDV 60
Query 61 WWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAW 120
WWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAW
Sbjct 61 WWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAW 120
Query 121 VQPRLSPVARAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAG 180
VQPRLSPVARAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAG
Sbjct 121 VQPRLSPVARAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAG 180
Query 181 TVAAITEWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEAGV 240
TVAAI EWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEAGV
Sbjct 181 TVAAIMEWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEAGV 240
Query 241 PNEKSRG 247
PNEKSRG
Sbjct 241 PNEKSRG 247
>gi|323719015|gb|EGB28164.1| hypothetical protein TMMG_01710 [Mycobacterium tuberculosis CDC1551A]
gi|339295315|gb|AEJ47426.1| hypothetical protein CCDC5079_2236 [Mycobacterium tuberculosis
CCDC5079]
gi|339298933|gb|AEJ51043.1| hypothetical protein CCDC5180_2206 [Mycobacterium tuberculosis
CCDC5180]
Length=237
Score = 475 bits (1222), Expect = 3e-132, Method: Compositional matrix adjust.
Identities = 236/237 (99%), Positives = 237/237 (100%), Gaps = 0/237 (0%)
Query 11 LLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDVWWAATQDPRA 70
+LVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDVWWAATQDPRA
Sbjct 1 MLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDVWWAATQDPRA 60
Query 71 WAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAWVQPRLSPVAR 130
WAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAWVQPRLSPVAR
Sbjct 61 WAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAWVQPRLSPVAR 120
Query 131 AALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAGTVAAITEWAQ 190
AALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAGTVAAITEWAQ
Sbjct 121 AALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAGTVAAITEWAQ 180
Query 191 HHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEAGVPNEKSRG 247
HHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEAGVPNEKSRG
Sbjct 181 HHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEAGVPNEKSRG 237
>gi|342857822|ref|ZP_08714478.1| hypothetical protein MCOL_03070 [Mycobacterium colombiense CECT
3035]
gi|342135155|gb|EGT88321.1| hypothetical protein MCOL_03070 [Mycobacterium colombiense CECT
3035]
Length=247
Score = 448 bits (1152), Expect = 4e-124, Method: Compositional matrix adjust.
Identities = 218/247 (89%), Positives = 234/247 (95%), Gaps = 0/247 (0%)
Query 1 MSSRRGRRPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDV 60
MSS R R+P LL+FADSLAYYGPTGGLPADDPRIWPNIVA+QL WD+ELIGRIGWTCRD+
Sbjct 1 MSSERPRKPTLLIFADSLAYYGPTGGLPADDPRIWPNIVATQLGWDVELIGRIGWTCRDI 60
Query 61 WWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAW 120
WWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRP WLRRWVRDGY W
Sbjct 61 WWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPPWLRRWVRDGYGW 120
Query 121 VQPRLSPVARAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAG 180
+QPRLSPVAR+ALPPHL+A+YLE+TRGAIDFNRPGIPI+ASLPSVHIA+TYG+AHHGR G
Sbjct 121 LQPRLSPVARSALPPHLSADYLEQTRGAIDFNRPGIPIVASLPSVHIADTYGRAHHGREG 180
Query 181 TVAAITEWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEAGV 240
TVAAITEWAQ H +PLVDLKAAVAEQ++SG GN DGIHWNFEAHQAVAELMLKALAEAGV
Sbjct 181 TVAAITEWAQTHRVPLVDLKAAVAEQVMSGRGNPDGIHWNFEAHQAVAELMLKALAEAGV 240
Query 241 PNEKSRG 247
NEK RG
Sbjct 241 ANEKPRG 247
>gi|254819851|ref|ZP_05224852.1| hypothetical protein MintA_07999 [Mycobacterium intracellulare
ATCC 13950]
Length=245
Score = 442 bits (1137), Expect = 2e-122, Method: Compositional matrix adjust.
Identities = 217/247 (88%), Positives = 233/247 (95%), Gaps = 2/247 (0%)
Query 1 MSSRRGRRPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDV 60
MSS + RP LL+FADSLAYYGPTGGLPADDPRIWPNIVA+QLDWD+ELIGRIGWTCRDV
Sbjct 1 MSSEQ--RPTLLIFADSLAYYGPTGGLPADDPRIWPNIVAAQLDWDVELIGRIGWTCRDV 58
Query 61 WWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAW 120
WWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRP WLRRWVRDGY W
Sbjct 59 WWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPPWLRRWVRDGYGW 118
Query 121 VQPRLSPVARAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAG 180
+QPRLSPVAR ALPPHL+A+YLE+TRGAIDFNRPGIPI+ASLPSVHIA+TYG+AHHGRAG
Sbjct 119 LQPRLSPVARPALPPHLSADYLEQTRGAIDFNRPGIPIVASLPSVHIADTYGRAHHGRAG 178
Query 181 TVAAITEWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEAGV 240
TVAAIT WAQ HD+PLVDLKAAVAE +++G GN DGIHWNFEAHQAVAELMLKALAEAG+
Sbjct 179 TVAAITAWAQSHDVPLVDLKAAVAEHVMNGRGNPDGIHWNFEAHQAVAELMLKALAEAGI 238
Query 241 PNEKSRG 247
NEK RG
Sbjct 239 SNEKPRG 245
>gi|240170830|ref|ZP_04749489.1| hypothetical protein MkanA1_16072 [Mycobacterium kansasii ATCC
12478]
Length=245
Score = 439 bits (1128), Expect = 3e-121, Method: Compositional matrix adjust.
Identities = 214/240 (90%), Positives = 223/240 (93%), Gaps = 0/240 (0%)
Query 8 RPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDVWWAATQD 67
RP LLVFADSLAYYGPTGGLPADDPRIWPNIVA+QLDWDLELIGRIGWTCRDVWWAATQD
Sbjct 6 RPVLLVFADSLAYYGPTGGLPADDPRIWPNIVAAQLDWDLELIGRIGWTCRDVWWAATQD 65
Query 68 PRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAWVQPRLSP 127
PR+WAALPRAGAV+FAT GMDSLPSVLPTALRELIRYVRP WLRRW RDGYAW QPR SP
Sbjct 66 PRSWAALPRAGAVVFATSGMDSLPSVLPTALRELIRYVRPPWLRRWARDGYAWAQPRFSP 125
Query 128 VARAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAGTVAAITE 187
VAR+ALPPHLT EYLE+TRGAIDFNRPGIP++ASLPSVHIAETY +AHHGR T AAI E
Sbjct 126 VARSALPPHLTVEYLEQTRGAIDFNRPGIPVVASLPSVHIAETYRRAHHGRKATAAAIIE 185
Query 188 WAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEAGVPNEKSRG 247
WAQ HDIPLVDLKAAVAE I+SG GN DGIHWNFEAHQAVAELMLKALAEAGVPNEK RG
Sbjct 186 WAQGHDIPLVDLKAAVAEHIMSGRGNPDGIHWNFEAHQAVAELMLKALAEAGVPNEKPRG 245
>gi|183983726|ref|YP_001852017.1| hypothetical protein MMAR_3746 [Mycobacterium marinum M]
gi|183177052|gb|ACC42162.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=251
Score = 437 bits (1125), Expect = 5e-121, Method: Compositional matrix adjust.
Identities = 217/250 (87%), Positives = 231/250 (93%), Gaps = 4/250 (1%)
Query 1 MSSRRG----RRPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWT 56
MSS RG +RP LLVFADSL+YYGPTGGLPADDPRIWPNIVA+QL WDLELIGRIGWT
Sbjct 1 MSSERGASPSQRPLLLVFADSLSYYGPTGGLPADDPRIWPNIVAAQLGWDLELIGRIGWT 60
Query 57 CRDVWWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRD 116
CRDVWWAATQDPR+WAALPRAGAVIFAT GMDSLPSVLPTALRELIRYVRP WLRRWVRD
Sbjct 61 CRDVWWAATQDPRSWAALPRAGAVIFATSGMDSLPSVLPTALRELIRYVRPPWLRRWVRD 120
Query 117 GYAWVQPRLSPVARAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHH 176
GYAWVQPRLSPVAR+ALP L+AEYLE+TR AIDFNRPGIP++ASLPSVHIAETYGKAHH
Sbjct 121 GYAWVQPRLSPVARSALPADLSAEYLEQTRSAIDFNRPGIPVVASLPSVHIAETYGKAHH 180
Query 177 GRAGTVAAITEWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALA 236
GR GTV+AIT WAQ HD+PLVDLKAAVAE+I+SG GN DGIHWNFEAHQ VAELMLKALA
Sbjct 181 GRPGTVSAITRWAQRHDVPLVDLKAAVAEEIMSGRGNPDGIHWNFEAHQGVAELMLKALA 240
Query 237 EAGVPNEKSR 246
EAGVP+EK R
Sbjct 241 EAGVPSEKPR 250
>gi|118618957|ref|YP_907289.1| hypothetical protein MUL_3690 [Mycobacterium ulcerans Agy99]
gi|118571067|gb|ABL05818.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=251
Score = 437 bits (1125), Expect = 6e-121, Method: Compositional matrix adjust.
Identities = 216/250 (87%), Positives = 231/250 (93%), Gaps = 4/250 (1%)
Query 1 MSSRRG----RRPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWT 56
MSS RG +RP LLVFADSL+YYGPTGGLPADDPRIWPNIVA+QL WDLELIGRIGWT
Sbjct 1 MSSERGASPSQRPLLLVFADSLSYYGPTGGLPADDPRIWPNIVAAQLGWDLELIGRIGWT 60
Query 57 CRDVWWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRD 116
CRDVWWAATQDPR+WAALPRAGAV+FAT GMDSLPSVLPTALRELIRYVRP WLRRWVRD
Sbjct 61 CRDVWWAATQDPRSWAALPRAGAVVFATSGMDSLPSVLPTALRELIRYVRPPWLRRWVRD 120
Query 117 GYAWVQPRLSPVARAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHH 176
GYAWVQPRLSPVAR+ALP L+AEYLE+TR AIDFNRPGIP++ASLPSVHIAETYGKAHH
Sbjct 121 GYAWVQPRLSPVARSALPADLSAEYLEQTRSAIDFNRPGIPVVASLPSVHIAETYGKAHH 180
Query 177 GRAGTVAAITEWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALA 236
GR GTV+AIT WAQ HD+PLVDLKAAVAE+I+SG GN DGIHWNFEAHQ VAELMLKALA
Sbjct 181 GRPGTVSAITRWAQRHDVPLVDLKAAVAEEIMSGRGNPDGIHWNFEAHQGVAELMLKALA 240
Query 237 EAGVPNEKSR 246
EAGVP+EK R
Sbjct 241 EAGVPSEKPR 250
>gi|108800493|ref|YP_640690.1| hypothetical protein Mmcs_3527 [Mycobacterium sp. MCS]
gi|119869632|ref|YP_939584.1| hypothetical protein Mkms_3600 [Mycobacterium sp. KMS]
gi|108770912|gb|ABG09634.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119695721|gb|ABL92794.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=246
Score = 433 bits (1113), Expect = 1e-119, Method: Compositional matrix adjust.
Identities = 212/235 (91%), Positives = 222/235 (95%), Gaps = 0/235 (0%)
Query 8 RPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDVWWAATQD 67
R LLVFADSLAYYGPTGGLP+DDPRIWPN+VA QL WDLELIGRIGWTCRDVWWAATQD
Sbjct 10 RRTLLVFADSLAYYGPTGGLPSDDPRIWPNLVAGQLGWDLELIGRIGWTCRDVWWAATQD 69
Query 68 PRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAWVQPRLSP 127
PRAWAALPRAGAV+FATGGMDSLPS LPTALRELIRYVRP WLRRWVRDGY W+QPRLSP
Sbjct 70 PRAWAALPRAGAVVFATGGMDSLPSPLPTALRELIRYVRPPWLRRWVRDGYGWIQPRLSP 129
Query 128 VARAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAGTVAAITE 187
VARAALPPHL+AEYLE TRGAIDFNRPGIPI+ASLPSVHIAETYGKAHHGRAGTV AITE
Sbjct 130 VARAALPPHLSAEYLEMTRGAIDFNRPGIPIVASLPSVHIAETYGKAHHGRAGTVRAITE 189
Query 188 WAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEAGVPN 242
WA+ HD+PLVDLKAAVAEQ+L G+GN DGIHWNFEAHQAVAELMLKALAEAGVP
Sbjct 190 WAEEHDVPLVDLKAAVAEQVLGGHGNPDGIHWNFEAHQAVAELMLKALAEAGVPQ 244
>gi|126436109|ref|YP_001071800.1| hypothetical protein Mjls_3532 [Mycobacterium sp. JLS]
gi|126235909|gb|ABN99309.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=246
Score = 430 bits (1106), Expect = 9e-119, Method: Compositional matrix adjust.
Identities = 211/235 (90%), Positives = 221/235 (95%), Gaps = 0/235 (0%)
Query 8 RPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDVWWAATQD 67
R LLVFADSLAYYGPTGGLP+DDPRIWPN+VA QL WDLELIGRIGWTCRDVWWAATQD
Sbjct 10 RRTLLVFADSLAYYGPTGGLPSDDPRIWPNLVAGQLGWDLELIGRIGWTCRDVWWAATQD 69
Query 68 PRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAWVQPRLSP 127
PRAWAALPRAGAV+FATGGMDSLPS LPTALRELIRYVRP WLRRWVRDGY W+QPRLSP
Sbjct 70 PRAWAALPRAGAVVFATGGMDSLPSPLPTALRELIRYVRPPWLRRWVRDGYGWIQPRLSP 129
Query 128 VARAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAGTVAAITE 187
VARAALPPHL+AEYLE TRGAIDFNRPGIPI+ASLPSVHIAETYGKAHHGRAGTV AITE
Sbjct 130 VARAALPPHLSAEYLEMTRGAIDFNRPGIPIVASLPSVHIAETYGKAHHGRAGTVRAITE 189
Query 188 WAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEAGVPN 242
WA+ HD+PLVDLKAAVAEQ+L G+GN DGIHWNFEAHQAVAELM KALAEAGVP
Sbjct 190 WAEEHDVPLVDLKAAVAEQVLGGHGNPDGIHWNFEAHQAVAELMRKALAEAGVPQ 244
>gi|118463634|ref|YP_880978.1| hypothetical protein MAV_1753 [Mycobacterium avium 104]
gi|254774569|ref|ZP_05216085.1| hypothetical protein MaviaA2_07848 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118164921|gb|ABK65818.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=249
Score = 430 bits (1105), Expect = 1e-118, Method: Compositional matrix adjust.
Identities = 213/242 (89%), Positives = 227/242 (94%), Gaps = 1/242 (0%)
Query 1 MSSRRGRRPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDV 60
MSS + RP LL+FADSLAYYGPTGGLPADDPRIWPNIVA+QLDWD+ELIGRIGWTCRDV
Sbjct 1 MSSEQRPRPTLLIFADSLAYYGPTGGLPADDPRIWPNIVAAQLDWDVELIGRIGWTCRDV 60
Query 61 WWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAW 120
WWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRP LRRWVRDGY W
Sbjct 61 WWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPPRLRRWVRDGYGW 120
Query 121 VQPRLSPVARAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAG 180
+QPRLSPVAR+ALPPHL+ +YLE+TRGAIDFNRPGIPI+ASLPSVHIA+TYG+AHHGRA
Sbjct 121 LQPRLSPVARSALPPHLSVDYLEQTRGAIDFNRPGIPIVASLPSVHIADTYGRAHHGRAA 180
Query 181 TVAAITEWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEAGV 240
T AAITEWAQ HDIPLVDLKAAVAE I+SG GN DGIHWNFEAHQAVAELMLKALAEA +
Sbjct 181 TAAAITEWAQSHDIPLVDLKAAVAEHIMSGRGNPDGIHWNFEAHQAVAELMLKALAEA-L 239
Query 241 PN 242
PN
Sbjct 240 PN 241
>gi|41408339|ref|NP_961175.1| hypothetical protein MAP2241c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396695|gb|AAS04558.1| hypothetical protein MAP_2241c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=249
Score = 429 bits (1103), Expect = 2e-118, Method: Compositional matrix adjust.
Identities = 211/238 (89%), Positives = 224/238 (95%), Gaps = 0/238 (0%)
Query 1 MSSRRGRRPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDV 60
MSS + RP LL+FADSLAYYGPTGGLPADDPRIWPNIVA+QLDWD+ELIGRIGWTCRDV
Sbjct 1 MSSEQRPRPTLLIFADSLAYYGPTGGLPADDPRIWPNIVAAQLDWDVELIGRIGWTCRDV 60
Query 61 WWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAW 120
WWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRP LRRWVRDGY W
Sbjct 61 WWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPPRLRRWVRDGYGW 120
Query 121 VQPRLSPVARAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAG 180
+QPRLSPVAR+ALPPHL+ +YLE+TRGAIDFNRPGIPI+ASLPSVHIA+TYG+AHHGRA
Sbjct 121 LQPRLSPVARSALPPHLSVDYLEQTRGAIDFNRPGIPIVASLPSVHIADTYGRAHHGRAA 180
Query 181 TVAAITEWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEA 238
T AAITEWAQ HDIPLVDLKAAVAE I+SG GN DGIHWNFEAHQAVAELMLKALAEA
Sbjct 181 TAAAITEWAQSHDIPLVDLKAAVAEHIMSGRGNPDGIHWNFEAHQAVAELMLKALAEA 238
>gi|336458223|gb|EGO37204.1| hypothetical protein MAPs_15180 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=249
Score = 427 bits (1098), Expect = 7e-118, Method: Compositional matrix adjust.
Identities = 210/238 (89%), Positives = 223/238 (94%), Gaps = 0/238 (0%)
Query 1 MSSRRGRRPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDV 60
MSS + RP LL+FADSLAYYGP GGLPADDPRIWPNIVA+QLDWD+ELIGRIGWTCRDV
Sbjct 1 MSSEQRPRPTLLIFADSLAYYGPAGGLPADDPRIWPNIVAAQLDWDVELIGRIGWTCRDV 60
Query 61 WWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAW 120
WWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRP LRRWVRDGY W
Sbjct 61 WWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPPRLRRWVRDGYGW 120
Query 121 VQPRLSPVARAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAG 180
+QPRLSPVAR+ALPPHL+ +YLE+TRGAIDFNRPGIPI+ASLPSVHIA+TYG+AHHGRA
Sbjct 121 LQPRLSPVARSALPPHLSVDYLEQTRGAIDFNRPGIPIVASLPSVHIADTYGRAHHGRAA 180
Query 181 TVAAITEWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEA 238
T AAITEWAQ HDIPLVDLKAAVAE I+SG GN DGIHWNFEAHQAVAELMLKALAEA
Sbjct 181 TAAAITEWAQSHDIPLVDLKAAVAEHIMSGRGNPDGIHWNFEAHQAVAELMLKALAEA 238
>gi|296170513|ref|ZP_06852099.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894825|gb|EFG74548.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=249
Score = 422 bits (1085), Expect = 2e-116, Method: Compositional matrix adjust.
Identities = 208/244 (86%), Positives = 225/244 (93%), Gaps = 4/244 (1%)
Query 8 RPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDVWWAATQD 67
RP LL+FADSLAYYGP GGLPADDPRIWPNIVA+QL WD+ELIGRIGWTCRD+WWAATQD
Sbjct 6 RPTLLIFADSLAYYGPAGGLPADDPRIWPNIVAAQLGWDVELIGRIGWTCRDIWWAATQD 65
Query 68 PRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAWVQPRLSP 127
PRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRP LRRWVRDGY W+QPRLSP
Sbjct 66 PRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPPRLRRWVRDGYGWLQPRLSP 125
Query 128 VARAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAGTVAAITE 187
VAR+ALPPHL+ +YLE+TRGAIDFNRPGIPI+ASLPSVHIA+TYG+AHHGRA T AAIT+
Sbjct 126 VARSALPPHLSVDYLEQTRGAIDFNRPGIPIVASLPSVHIADTYGRAHHGRAATAAAITD 185
Query 188 WAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAE----AGVPNE 243
WAQ HDIPLVDLKAAVAE+I++G GN DGIHWNFEAHQAVAELMLKALAE A VP +
Sbjct 186 WAQGHDIPLVDLKAAVAEEIMTGRGNPDGIHWNFEAHQAVAELMLKALAEALQKAQVPTD 245
Query 244 KSRG 247
K RG
Sbjct 246 KPRG 249
>gi|118471453|ref|YP_888847.1| hypothetical protein MSMEG_4578 [Mycobacterium smegmatis str.
MC2 155]
gi|118172740|gb|ABK73636.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=252
Score = 404 bits (1038), Expect = 6e-111, Method: Compositional matrix adjust.
Identities = 194/240 (81%), Positives = 213/240 (89%), Gaps = 0/240 (0%)
Query 6 GRRPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDVWWAAT 65
G RP LLVFADSL+Y+GPTGGLPADDPRIWPNIV QL WD+ELIGRIGWTCRDVWWAAT
Sbjct 11 GHRPVLLVFADSLSYFGPTGGLPADDPRIWPNIVGEQLGWDVELIGRIGWTCRDVWWAAT 70
Query 66 QDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAWVQPRL 125
QDPR+WAALPRAGAV+FAT GMDSLPS LPTALRE+IRYVRP WLRRWVRDGY WVQPRL
Sbjct 71 QDPRSWAALPRAGAVVFATSGMDSLPSPLPTALREMIRYVRPPWLRRWVRDGYGWVQPRL 130
Query 126 SPVARAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAGTVAAI 185
SP+AR+ALPPH+T EYLE TR AIDFNRPGIP++ASLPSVHIAETYG+AHHGR TV AI
Sbjct 131 SPIARSALPPHVTVEYLEMTRNAIDFNRPGIPVVASLPSVHIAETYGRAHHGREPTVRAI 190
Query 186 TEWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEAGVPNEKS 245
T WA+ H +PLVDLKAAVA+++ G GN DGIHW+FEAH+AVAELMLK LAEAGV S
Sbjct 191 TAWAEEHHVPLVDLKAAVADEVFGGRGNPDGIHWSFEAHRAVAELMLKGLAEAGVTQRDS 250
>gi|333990130|ref|YP_004522744.1| hypothetical protein JDM601_1490 [Mycobacterium sp. JDM601]
gi|333486098|gb|AEF35490.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=249
Score = 395 bits (1016), Expect = 2e-108, Method: Compositional matrix adjust.
Identities = 195/239 (82%), Positives = 212/239 (89%), Gaps = 0/239 (0%)
Query 7 RRPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDVWWAATQ 66
+RPALL+FADSL+YYGPTGGLPADDPRIWPNIV +QL WD+ELIGRIGWT RDVWWAATQ
Sbjct 11 KRPALLIFADSLSYYGPTGGLPADDPRIWPNIVGAQLGWDVELIGRIGWTSRDVWWAATQ 70
Query 67 DPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAWVQPRLS 126
DPRAWAALPRAGAVI AT GMDSLPSV PTALRELIRYVRP LRRWVRDGY W+QPR S
Sbjct 71 DPRAWAALPRAGAVIIATSGMDSLPSVWPTALRELIRYVRPPRLRRWVRDGYGWLQPRFS 130
Query 127 PVARAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAGTVAAIT 186
P ARAALPP LTA+YLE TRGAIDFNRPGIPI+A LPSVHIA+TYG+AH GR TV AIT
Sbjct 131 PRARAALPPQLTADYLEMTRGAIDFNRPGIPIVACLPSVHIADTYGRAHQGREPTVHAIT 190
Query 187 EWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEAGVPNEKS 245
+WAQ DI LVDLKAAVA++++SG N DGIHWNFEAH+AVAELMLKALAEAGVP +
Sbjct 191 QWAQRQDITLVDLKAAVADEVMSGRANPDGIHWNFEAHRAVAELMLKALAEAGVPGSSA 249
>gi|145223243|ref|YP_001133921.1| hypothetical protein Mflv_2656 [Mycobacterium gilvum PYR-GCK]
gi|315443701|ref|YP_004076580.1| hypothetical protein Mspyr1_20910 [Mycobacterium sp. Spyr1]
gi|145215729|gb|ABP45133.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
gi|315262004|gb|ADT98745.1| hypothetical protein Mspyr1_20910 [Mycobacterium sp. Spyr1]
Length=249
Score = 395 bits (1015), Expect = 3e-108, Method: Compositional matrix adjust.
Identities = 193/246 (79%), Positives = 211/246 (86%), Gaps = 0/246 (0%)
Query 2 SSRRGRRPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDVW 61
S G R LL+F DSL+YYGPTGGLP+DDPRIWPN+VA QLDWD+ELIGRIGWT RDVW
Sbjct 3 SDPTGVRRTLLIFCDSLSYYGPTGGLPSDDPRIWPNLVAGQLDWDVELIGRIGWTSRDVW 62
Query 62 WAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAWV 121
WAATQDPR+WAALPRAGAVIFAT GMDSLPS LPTALRELIRYVRP LRRW RDGY W+
Sbjct 63 WAATQDPRSWAALPRAGAVIFATSGMDSLPSPLPTALRELIRYVRPPRLRRWARDGYGWL 122
Query 122 QPRLSPVARAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAGT 181
QPRLSP+AR ALPPHLT EYLE TR AIDFNRPGIP++ASLPSVHIA TYG +H GR GT
Sbjct 123 QPRLSPIARPALPPHLTVEYLEMTRAAIDFNRPGIPVVASLPSVHIAPTYGMSHRGRPGT 182
Query 182 VAAITEWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEAGVP 241
VAAI+ WA H +PLVDLKAAV E+++SG GN DGIHWNFEAHQAVA+LMLK LAEAGVP
Sbjct 183 VAAISAWAAEHGVPLVDLKAAVGEEVMSGRGNPDGIHWNFEAHQAVADLMLKGLAEAGVP 242
Query 242 NEKSRG 247
+ G
Sbjct 243 ASAADG 248
>gi|120404877|ref|YP_954706.1| hypothetical protein Mvan_3923 [Mycobacterium vanbaalenii PYR-1]
gi|119957695|gb|ABM14700.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=249
Score = 370 bits (950), Expect = 1e-100, Method: Compositional matrix adjust.
Identities = 196/249 (79%), Positives = 217/249 (88%), Gaps = 2/249 (0%)
Query 1 MSSR--RGRRPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCR 58
MSS RG LLVF DSL+YYGPTGGLP+DDPRIWPNIVA++L WD+ELIGRIGWT R
Sbjct 1 MSSEAARGGARTLLVFCDSLSYYGPTGGLPSDDPRIWPNIVAAELGWDVELIGRIGWTSR 60
Query 59 DVWWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGY 118
DVWWAATQDPR+WAALPRAGAVIFAT GMDSLPS LPTALRELIRYVRP +RRWVRDGY
Sbjct 61 DVWWAATQDPRSWAALPRAGAVIFATSGMDSLPSPLPTALRELIRYVRPPRVRRWVRDGY 120
Query 119 AWVQPRLSPVARAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGR 178
WVQP+LSPV+R+ALPP LTAEYLE TR AIDFNRPGIP++A+LPSVHIA TYG AHHGR
Sbjct 121 GWVQPKLSPVSRSALPPQLTAEYLEMTRAAIDFNRPGIPVVAALPSVHIAPTYGMAHHGR 180
Query 179 AGTVAAITEWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEA 238
AGTVAAITEWA ++PLVDLKAAV E+++SG GN DGIHWNFEAH+AVAELM+K L+EA
Sbjct 181 AGTVAAITEWAAEREVPLVDLKAAVGEEVMSGRGNPDGIHWNFEAHRAVAELMIKGLSEA 240
Query 239 GVPNEKSRG 247
GV S G
Sbjct 241 GVEVPASDG 249
>gi|169628714|ref|YP_001702363.1| hypothetical protein MAB_1624 [Mycobacterium abscessus ATCC 19977]
gi|169240681|emb|CAM61709.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=247
Score = 350 bits (897), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 177/248 (72%), Positives = 202/248 (82%), Gaps = 3/248 (1%)
Query 1 MSSRRG--RRPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCR 58
M+S G R LLVFADSL+YYGPTGGL A DPRIWPNIVA +LDWDLELI RIGWTCR
Sbjct 1 MTSSDGSAERKTLLVFADSLSYYGPTGGLAASDPRIWPNIVAKKLDWDLELIARIGWTCR 60
Query 59 DVWWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGY 118
DVWWAA QDPRAWAA+P AGAVIFATGGMDSLPS LPTALRE IR +RP+ LR WVR+GY
Sbjct 61 DVWWAAIQDPRAWAAVPTAGAVIFATGGMDSLPSPLPTALRESIRLIRPAKLRSWVREGY 120
Query 119 AWVQPRLSPVARAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGR 178
W+QPRLSP+AR ALPP LT EYLEKTRGA+DFNRPG+P++ASLPSVHIAE+YG+ H GR
Sbjct 121 GWLQPRLSPIARVALPPKLTVEYLEKTRGALDFNRPGLPMVASLPSVHIAESYGRVHSGR 180
Query 179 AGTVAAITEWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEA 238
T +AI WA H IP+VDLK V E++ SG N DGIHWNF AH+ VAELM+ AL ++
Sbjct 181 EATASAIAAWASEHKIPVVDLKQGVGEEVFSGRANPDGIHWNFVAHERVAELMIDAL-QS 239
Query 239 GVPNEKSR 246
+P K+R
Sbjct 240 VLPELKAR 247
>gi|111018304|ref|YP_701276.1| hypothetical protein RHA1_ro01294 [Rhodococcus jostii RHA1]
gi|110817834|gb|ABG93118.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=265
Score = 312 bits (800), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 154/244 (64%), Positives = 182/244 (75%), Gaps = 1/244 (0%)
Query 5 RGRRPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDVWWAA 64
RG RP LLV ADSL+YYGP GGLP+D P IWPNIVA QL WD+EL+ RIGWT RDVWWA
Sbjct 10 RGERPVLLVLADSLSYYGPKGGLPSDHPDIWPNIVARQLGWDVELVARIGWTSRDVWWAL 69
Query 65 TQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAWVQPR 124
TQDPR W+A+PRAGAV+FA GGMDSLPS LPTALRE +RYVRP LRR VR GY W+QPR
Sbjct 70 TQDPRVWSAVPRAGAVVFAVGGMDSLPSPLPTALREQLRYVRPPALRRVVRTGYQWLQPR 129
Query 125 LSPVA-RAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAGTVA 183
LSP+ ALPP L+ EYLE +R A+++ RP +P+I +LPSVH +E YGK H GR G VA
Sbjct 130 LSPLGWPVALPPRLSVEYLESSRAALEYMRPELPVIGTLPSVHRSEAYGKVHAGRPGAVA 189
Query 184 AITEWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEAGVPNE 243
AIT W++ ++PLVDL AV + S GN DGIHW ++ H VA ML AL AGV +
Sbjct 190 AITAWSEEKNVPLVDLAEAVRANVFSDQGNPDGIHWGWDGHTEVAAAMLTALRAAGVVPD 249
Query 244 KSRG 247
+ G
Sbjct 250 SAEG 253
>gi|226307260|ref|YP_002767220.1| hypothetical protein RER_37730 [Rhodococcus erythropolis PR4]
gi|226186377|dbj|BAH34481.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=260
Score = 306 bits (783), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 150/243 (62%), Positives = 183/243 (76%), Gaps = 3/243 (1%)
Query 3 SRRGRRPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDVWW 62
S G+RP LLV ADSL+Y+GP GGL AD PRIWPNIVA +L WD+EL+ RIGWTCRD WW
Sbjct 6 SADGQRPVLLVLADSLSYFGPKGGLAADHPRIWPNIVADELGWDVELVARIGWTCRDAWW 65
Query 63 AATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAWVQ 122
A TQDPR WAA+PRAGAV+FA GGMDSLPS LPTALRE IRYVRP LRR VR+GY W+Q
Sbjct 66 ALTQDPRVWAAVPRAGAVVFAVGGMDSLPSPLPTALRETIRYVRPPALRRVVREGYQWLQ 125
Query 123 PRLSPVAR-AALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAGT 181
PRL+P+ R ALPP L+ EYLE +R A+++ RP +P+IA+LPSVH ++ Y H GR
Sbjct 126 PRLAPLGRPVALPPKLSVEYLESSRNALEYMRPELPMIATLPSVHRSDAYASVHAGRPAA 185
Query 182 VAAITEWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEAGVP 241
V+AITEWA D+P+VDL AV + + S GN DGIHW ++ H VA M+ A+ GV
Sbjct 186 VSAITEWATEKDVPVVDLADAVRDNVFSENGNPDGIHWGWDGHVGVARAMIAAI--RGVE 243
Query 242 NEK 244
++K
Sbjct 244 SKK 246
>gi|229493216|ref|ZP_04387008.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229319947|gb|EEN85776.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=260
Score = 304 bits (779), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 146/235 (63%), Positives = 177/235 (76%), Gaps = 1/235 (0%)
Query 2 SSRRGRRPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDVW 61
S G+RP LLV ADSL+Y+GP GGL AD PRIWPNIVA +L WD+EL+ RIGWTCRD W
Sbjct 5 ESADGQRPVLLVLADSLSYFGPKGGLAADHPRIWPNIVADELGWDVELVARIGWTCRDAW 64
Query 62 WAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAWV 121
WA TQDPR WAA+PRAGAV+FA GGMDSLPS LPTALRE IRYVRP RR VR+GY W+
Sbjct 65 WALTQDPRVWAAVPRAGAVVFAVGGMDSLPSPLPTALRETIRYVRPPAFRRVVREGYQWL 124
Query 122 QPRLSPVAR-AALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAG 180
QPRL+P+ R ALPP L+ EYLE +R A+++ RP +P+IA+LPSVH ++ Y H GR
Sbjct 125 QPRLAPLGRPVALPPKLSVEYLESSRNALEYMRPELPMIATLPSVHRSDAYASVHAGRPA 184
Query 181 TVAAITEWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKAL 235
V+AITEWA D+P+VDL AV + + S GN DGIHW ++ H VA M+ A+
Sbjct 185 AVSAITEWATEKDVPVVDLADAVRDNVFSENGNPDGIHWGWDGHVGVARAMIAAI 239
>gi|226360430|ref|YP_002778208.1| hypothetical protein ROP_10160 [Rhodococcus opacus B4]
gi|226238915|dbj|BAH49263.1| hypothetical protein [Rhodococcus opacus B4]
Length=265
Score = 303 bits (775), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 149/243 (62%), Positives = 178/243 (74%), Gaps = 1/243 (0%)
Query 6 GRRPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDVWWAAT 65
G RP LLV ADSL+YYGP GGLP+D P IWPNIV QL WD+EL+ RIGWT RDVWWA T
Sbjct 11 GERPVLLVLADSLSYYGPKGGLPSDHPDIWPNIVGRQLGWDVELVARIGWTSRDVWWALT 70
Query 66 QDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAWVQPRL 125
QDPR W+A+PRAGAV+FA GGMDSLPS LPTALRE +RYVRP LRR VR GY W+QPRL
Sbjct 71 QDPRVWSAVPRAGAVVFAVGGMDSLPSPLPTALREQLRYVRPPALRRVVRSGYQWLQPRL 130
Query 126 SPVA-RAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAGTVAA 184
+P+ ALPP L+ EYLE +R A+ + RP +P+I +LPSVH +E YGK H GR G VAA
Sbjct 131 APLGWPVALPPRLSVEYLESSRAALAYMRPELPVIGTLPSVHRSEAYGKVHAGRPGAVAA 190
Query 185 ITEWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEAGVPNEK 244
IT W++ ++PLVDL AV + S GN DGIHW ++ H VA ML A+ A V +
Sbjct 191 ITTWSEKKNVPLVDLAEAVRANVFSDQGNPDGIHWGWDGHTEVAAAMLTAIRAADVVPDS 250
Query 245 SRG 247
+ G
Sbjct 251 AAG 253
>gi|54023346|ref|YP_117588.1| hypothetical protein nfa13790 [Nocardia farcinica IFM 10152]
gi|54014854|dbj|BAD56224.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=413
Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/238 (62%), Positives = 176/238 (74%), Gaps = 1/238 (0%)
Query 1 MSSRRGRRPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDV 60
++S +RP LLV ADSLAY+GP GGLPAD PRIWPN+VA++LDWD+EL+GRIGWTCRD
Sbjct 174 VASAESKRPVLLVIADSLAYFGPKGGLPADHPRIWPNLVAAELDWDVELVGRIGWTCRDA 233
Query 61 WWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAW 120
+WA DPR WAA+PRAGAV+FA GGMD+LPS LPTALRELIRYVRP LRR VR Y W
Sbjct 234 YWALIGDPRVWAAVPRAGAVVFAVGGMDTLPSPLPTALRELIRYVRPPALRRRVRATYNW 293
Query 121 VQPRLSPVAR-AALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRA 179
+QPRLS + R ALPP ++ +YLE++R A+ RP +P+I LPSVH E YG+ H GR
Sbjct 294 LQPRLSKLGRPVALPPQVSIDYLEQSRQALAQLRPDLPVIGVLPSVHNCEAYGRVHSGRP 353
Query 180 GTVAAITEWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAE 237
V A+ EW+ +PLVDL AV E I SG N DGIHW ++ H AVA M+K L E
Sbjct 354 RAVKALREWSARTAVPLVDLGEAVRENIFSGEANPDGIHWGWDGHTAVANAMVKTLQE 411
>gi|312140324|ref|YP_004007660.1| hypothetical protein REQ_29640 [Rhodococcus equi 103S]
gi|325677100|ref|ZP_08156769.1| hypothetical protein HMPREF0724_14552 [Rhodococcus equi ATCC
33707]
gi|311889663|emb|CBH48980.1| conserved hypothetical protein [Rhodococcus equi 103S]
gi|325552085|gb|EGD21778.1| hypothetical protein HMPREF0724_14552 [Rhodococcus equi ATCC
33707]
Length=251
Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 137/242 (57%), Positives = 171/242 (71%), Gaps = 1/242 (0%)
Query 1 MSSRRGRRPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDV 60
M++ +P LLV ADSLAYYGP GGLPAD PRIWP++VA +L W +EL+ RIGWT RD
Sbjct 1 MTASEPEQPVLLVVADSLAYYGPKGGLPADHPRIWPSLVAKELGWRVELVARIGWTSRDA 60
Query 61 WWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAW 120
WWA TQDPR WAA+P+AGAV+FA GGMDSLPS LPTALRE +RY+RP LRR VR GY W
Sbjct 61 WWAITQDPRVWAAVPQAGAVVFAVGGMDSLPSPLPTALREQLRYIRPPALRRVVRTGYQW 120
Query 121 VQPRLSPVAR-AALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRA 179
+QPRLS + R ALPP L+ EYLE R A+ RP +P+I + PSVH + YG+ H GR
Sbjct 121 LQPRLSKLGRPVALPPRLSVEYLESCRDALAAIRPDLPVIGTYPSVHRCDAYGRVHAGRE 180
Query 180 GTVAAITEWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEAG 239
V A+ W+ +P+VDL AAV + + S + N DGIHW ++AH+ VA M+ A+
Sbjct 181 PAVRALEAWSAQKGVPMVDLAAAVRDNVFSDHANPDGIHWGWDAHEEVAAAMIDAIKNVR 240
Query 240 VP 241
P
Sbjct 241 RP 242
>gi|326381583|ref|ZP_08203277.1| hypothetical protein SCNU_01490 [Gordonia neofelifaecis NRRL
B-59395]
gi|326199830|gb|EGD57010.1| hypothetical protein SCNU_01490 [Gordonia neofelifaecis NRRL
B-59395]
Length=238
Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/232 (57%), Positives = 157/232 (68%), Gaps = 3/232 (1%)
Query 10 ALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDVWWAATQDPR 69
++LV DSL++YG TGGLPADD RIWPN+V ++L D+EL RIGWT RD+WWA TQDPR
Sbjct 3 SILVLGDSLSFYGATGGLPADDERIWPNLVGAELGHDVELFARIGWTSRDIWWAITQDPR 62
Query 70 AWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAWVQPRLSPVA 129
WAA+P A ++ A GGMDSLPS LPTALRE IRYVRP+ LR+ VR Y W+QPRLSPV
Sbjct 63 VWAAVPHADVLVLAFGGMDSLPSPLPTALREQIRYVRPAKLRQAVRGAYGWLQPRLSPVG 122
Query 130 -RAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAGTVAAITEW 188
A+PP TA Y EK RGA+ RP +PI+ LP H + YG H GR T AI+EW
Sbjct 123 WPMAIPPAETARYFEKVRGALAHLRPDLPIVVCLPPTHDSPYYGNVHPGRIPTTVAISEW 182
Query 189 AQHHDIPLVDLKAAVAEQIL--SGYGNRDGIHWNFEAHQAVAELMLKALAEA 238
A HD+P VD AE S N DGIHW EAH +AE++ A+ +A
Sbjct 183 AHEHDLPTVDFYPVTAEAFADPSVEMNPDGIHWGLEAHGRIAEIVAPAVRDA 234
>gi|296393429|ref|YP_003658313.1| hypothetical protein Srot_1009 [Segniliparus rotundus DSM 44985]
gi|296180576|gb|ADG97482.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985]
Length=247
Score = 249 bits (636), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 132/229 (58%), Positives = 169/229 (74%), Gaps = 1/229 (0%)
Query 8 RPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDVWWAATQD 67
R LLV ADSLAYYGP G L +DDPRIWPN+VA++L W LEL+ +IGWT R+ +WA +D
Sbjct 5 RQTLLVLADSLAYYGPNGALASDDPRIWPNLVAAELGWQLELVAQIGWTSREAYWALMKD 64
Query 68 PRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAWVQPRLSP 127
PRAWAALP+AGA++ A GMDSLPS LPTALRE +RY+RP LRR VR+ Y W QP+L+P
Sbjct 65 PRAWAALPKAGALVIAVCGMDSLPSPLPTALRESMRYIRPPRLRRRVREAYQWAQPKLAP 124
Query 128 VA-RAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAGTVAAIT 186
+ ALP LT Y E+ R ++ RP + ++A+LPSVH A +Y +AH GR T AA++
Sbjct 125 IGWPIALPAGLTVHYQERIRSSVAALRPDLQVVATLPSVHCAPSYARAHRGRPKTAAALS 184
Query 187 EWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKAL 235
+WA+ H + +VDLKAAV E + +G GN DGIHW FE H+ VA ML+AL
Sbjct 185 DWARSHRLRVVDLKAAVEEHVFAGRGNPDGIHWGFEGHERVAAAMLRAL 233
>gi|333918812|ref|YP_004492393.1| hypothetical protein AS9A_1141 [Amycolicicoccus subflavus DQS3-9A1]
gi|333481033|gb|AEF39593.1| hypothetical protein AS9A_1141 [Amycolicicoccus subflavus DQS3-9A1]
Length=252
Score = 249 bits (636), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 126/229 (56%), Positives = 158/229 (69%), Gaps = 1/229 (0%)
Query 8 RPALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDVWWAATQD 67
R ALLV DSLA+YGP GGLPA+DPR+WPN+VA +L L R+GWT RD WWA TQD
Sbjct 6 RDALLVLGDSLAFYGPKGGLPANDPRLWPNLVAEELGLKAHLCARVGWTTRDAWWALTQD 65
Query 68 PRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAWVQPRLSP 127
P+ W+ +PRA AV+ A GMDSLPS LPTALRE IRY+RP LRR VR Y VQ LSP
Sbjct 66 PQVWSVIPRARAVVIAVSGMDSLPSPLPTALREHIRYIRPPVLRRVVRGAYRHVQSALSP 125
Query 128 VA-RAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAGTVAAIT 186
V ALPP LT YLE+ R A++ RP +P++A+LP++ ++ Y + G+ T A++
Sbjct 126 VGWPMALPPRLTVCYLEEMRSALNAVRPDLPVVATLPALQHSKYYSYSQPGQPRTSRAVS 185
Query 187 EWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKAL 235
WA H +PLVDL AA + +G GN DGIHWNF+AH+ VA LM A+
Sbjct 186 RWAAQHAVPLVDLAAATITHLKAGEGNPDGIHWNFDAHRRVAGLMRDAI 234
>gi|317506546|ref|ZP_07964342.1| hypothetical protein HMPREF9336_00712 [Segniliparus rugosus ATCC
BAA-974]
gi|316255162|gb|EFV14436.1| hypothetical protein HMPREF9336_00712 [Segniliparus rugosus ATCC
BAA-974]
Length=201
Score = 241 bits (615), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 117/194 (61%), Positives = 148/194 (77%), Gaps = 1/194 (0%)
Query 11 LLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDVWWAATQDPRA 70
LLV ADSLAY+GP GGLPADDPRIWPN+VA++L W LEL+ +IGWT R+ +WA +DPRA
Sbjct 8 LLVLADSLAYFGPNGGLPADDPRIWPNLVAAELGWTLELVAQIGWTSREAYWALIKDPRA 67
Query 71 WAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAWVQPRLSPVA- 129
WAALP+AGA++ A GMD+LPS LPTA+RE IRY+RP LRR VR+ Y W QPRL+P+
Sbjct 68 WAALPKAGALVIAVCGMDTLPSPLPTAVRETIRYIRPPQLRRRVREAYQWAQPRLAPLGW 127
Query 130 RAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAGTVAAITEWA 189
ALP LT EY E+ R ++ RP +P++A+LPSVH A +Y K H GR T AA++ WA
Sbjct 128 PIALPARLTVEYQEEIRSSVAALRPDLPVVATLPSVHCAPSYAKVHRGRRKTAAALSTWA 187
Query 190 QHHDIPLVDLKAAV 203
+ +P+VDLKAAV
Sbjct 188 GRNRLPVVDLKAAV 201
>gi|343926809|ref|ZP_08766302.1| hypothetical protein GOALK_072_00310 [Gordonia alkanivorans NBRC
16433]
gi|343763169|dbj|GAA13228.1| hypothetical protein GOALK_072_00310 [Gordonia alkanivorans NBRC
16433]
Length=249
Score = 239 bits (609), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 121/240 (51%), Positives = 153/240 (64%), Gaps = 10/240 (4%)
Query 10 ALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDVWWAATQDPR 69
++V +DSLAYYGP GGLPA+DPRIWP++V + +D ++L GRIGWT RDVWWA TQDP
Sbjct 14 CMMVLSDSLAYYGPVGGLPANDPRIWPSLVGADVDLPVKLFGRIGWTSRDVWWALTQDPN 73
Query 70 AWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAWVQPRLSPVA 129
WA +P V+ A GGMD+LPS LPTALRE IRYVRP+ LR+ VRD Y+WVQPR + +
Sbjct 74 IWATVPHTDVVVLAFGGMDTLPSPLPTALREQIRYVRPNRLRQLVRDAYSWVQPRGARLG 133
Query 130 -RAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAGTVAAITEW 188
ALPP +T EYLEK A+ RP +PI+ LP H + YG H GR T AA+ W
Sbjct 134 WPLALPPKVTVEYLEKIHEALSQLRPDLPIVVCLPPTHSSPYYGHVHTGRIPTTAAMARW 193
Query 189 AQHHDIPLVDLKAAVAEQILSGYG--NRDGIHWNFEAHQAVAELMLKALAEAGVPNEKSR 246
A+ H +P VD + N DGIHW F H+ +A+L+ + EKSR
Sbjct 194 AEQHGLPCVDFYPVTRDAFEDPVAAMNPDGIHWGFSCHRQIADLVTPVV-------EKSR 246
>gi|262203081|ref|YP_003274289.1| hypothetical protein Gbro_3191 [Gordonia bronchialis DSM 43247]
gi|262086428|gb|ACY22396.1| hypothetical protein Gbro_3191 [Gordonia bronchialis DSM 43247]
Length=252
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 119/236 (51%), Positives = 147/236 (63%), Gaps = 9/236 (3%)
Query 10 ALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDVWWAATQDPR 69
++LV +DSLAYYGP GGLP+ D RIWP+IV + + L GRIGWT RDVWWA TQDP
Sbjct 5 SVLVLSDSLAYYGPAGGLPSTDRRIWPSIVGERCGRGVRLFGRIGWTSRDVWWALTQDPN 64
Query 70 AWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAWVQPRLSPVA 129
WAA+P A V+ A GGMDSLPS LPTALRE IRYVRP+ LR+ VR Y WVQPR + +
Sbjct 65 IWAAVPDAEVVVLAFGGMDSLPSPLPTALREQIRYVRPNRLRQVVRTAYQWVQPRAARLG 124
Query 130 -RAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAGTVAAITEW 188
ALPP +T EYLEK R A+ RP +PI+ LP H + YG H GR T +A+ W
Sbjct 125 WPVALPPAVTVEYLEKIRSALAQLRPDLPIVVCLPPTHRSPYYGDVHLGRIPTTSAMLGW 184
Query 189 AQHHDIPLVDLKAAVAEQILSGYG--------NRDGIHWNFEAHQAVAELMLKALA 236
A+ H + VD + N DGIHW FE H+ +A+L+ +A
Sbjct 185 ARAHGLECVDFYPVTRDAFDDFDAQDDSDSAMNPDGIHWGFECHRRIADLVAPVVA 240
>gi|296140499|ref|YP_003647742.1| hypothetical protein Tpau_2805 [Tsukamurella paurometabola DSM
20162]
gi|296028633|gb|ADG79403.1| conserved hypothetical protein [Tsukamurella paurometabola DSM
20162]
Length=238
Score = 214 bits (546), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 113/230 (50%), Positives = 142/230 (62%), Gaps = 1/230 (0%)
Query 11 LLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDVWWAATQDPRA 70
L V +DSL +YGP G LP DPRIWPN+VA++L EL GR+GWT RD WW +QDPR
Sbjct 8 LFVLSDSLGFYGPEGALPTSDPRIWPNLVAAELGMRCELFGRVGWTTRDGWWCVSQDPRV 67
Query 71 WAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAWVQPRLSPVA- 129
WAA+P AV+ A GGMDSLPS +PTALRE IRY+RP+ LR RDGYA VQ +PV
Sbjct 68 WAAIPGVDAVVLALGGMDSLPSPIPTALREQIRYLRPASLRARARDGYAVVQRLFAPVGW 127
Query 130 RAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAGTVAAITEWA 189
ALPP +T +YL++T +I RP P+VH Y A G T AA+ WA
Sbjct 128 PMALPPEVTVDYLDRTHASITALRPHASTAVLGPAVHRTRAYAFAQPGWTRTDAAMRAWA 187
Query 190 QHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEAG 239
D+P V ++ G N DGIHW+FE H+ VA+ +L++L G
Sbjct 188 DDADVPYVPVRDLCEWSFDLGINNIDGIHWSFEMHEQVAQRVLRSLRAGG 237
>gi|302528896|ref|ZP_07281238.1| conserved hypothetical protein [Streptomyces sp. AA4]
gi|302437791|gb|EFL09607.1| conserved hypothetical protein [Streptomyces sp. AA4]
Length=242
Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/231 (49%), Positives = 146/231 (64%), Gaps = 3/231 (1%)
Query 9 PALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDVWWAATQDP 68
P LLVF DSL ++GP G ADDPR+WPN+ A+ L +L+ IGWT RD+WW+ T DP
Sbjct 3 PQLLVFGDSLCFHGPEGPCAADDPRLWPNVAANALSGRADLVAGIGWTARDLWWSLTGDP 62
Query 69 RAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAWVQPRLSPV 128
R WA L R AV+ A G MD+LPS LPT LR+ +RY+RP +RR VR Y QPRLS +
Sbjct 63 RVWADLRRVDAVVLAVGHMDTLPSPLPTYLRQGLRYLRPDGVRRVVRGAYLAAQPRLSVL 122
Query 129 ARA---ALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAGTVAAI 185
R LP L+ YL+++ A+ RP +P+ LPSVH A+ YG+ H GRA AA+
Sbjct 123 MRGRPRVLPARLSVSYLDQSVEALRALRPELPVFGMLPSVHRADAYGRVHTGRAEAAAAL 182
Query 186 TEWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALA 236
WA ++PL+D V E +LSG GN DG+HW + H+AV M K +A
Sbjct 183 ASWAARREVPLLDTPGVVGEHVLSGAGNPDGMHWGWAGHEAVGTAMAKLVA 233
>gi|257055301|ref|YP_003133133.1| hypothetical protein Svir_12570 [Saccharomonospora viridis DSM
43017]
gi|256585173|gb|ACU96306.1| hypothetical protein Svir_12570 [Saccharomonospora viridis DSM
43017]
Length=263
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 112/242 (47%), Positives = 142/242 (59%), Gaps = 7/242 (2%)
Query 9 PALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDVWWAATQDP 68
P LLVF DSL+++GP G PADD R+WPN+ A L +L+ R GWT RD WWA DP
Sbjct 7 PRLLVFGDSLSFHGPDRGYPADDERLWPNVAARSLGGVADLVARAGWTARDAWWAMIGDP 66
Query 69 RAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAWVQPRLSPV 128
R WA L RA V+ A G MD++PS LPT LR +RY+RP LRR R Y QP LS
Sbjct 67 RVWAELHRADIVVLAVGSMDTVPSPLPTYLRTGLRYLRPDSLRRAARRTYLAAQPVLSVA 126
Query 129 AR---AALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAGTVAAI 185
R +ALPP LT YL+ A+ RP +P++ LPSVH A +YG R T A+
Sbjct 127 LRGRPSALPPRLTVRYLDLAVSALRALRPSLPVVGWLPSVHRAASYGYVQTVRPRTAVAV 186
Query 186 TEWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEAGVPNEKS 245
+ WA +PL+D+ A V +L G+GN DG+HW ++ H V KA+AE P
Sbjct 187 SRWAADVGVPLLDVPAVVGAHVLGGHGNPDGMHWGWDGHALVG----KAMAELIRPLLTR 242
Query 246 RG 247
RG
Sbjct 243 RG 244
>gi|300788529|ref|YP_003768820.1| hypothetical protein AMED_6692 [Amycolatopsis mediterranei U32]
gi|299798043|gb|ADJ48418.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340530134|gb|AEK45339.1| hypothetical protein RAM_34330 [Amycolatopsis mediterranei S699]
Length=242
Score = 197 bits (502), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 112/238 (48%), Positives = 140/238 (59%), Gaps = 3/238 (1%)
Query 9 PALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDVWWAATQDP 68
P LLVF DSL+++GP G AD+PR+WPN+ A+ L +L+ IGW RD WW+ T DP
Sbjct 3 PRLLVFGDSLSFHGPEGPCAADEPRLWPNVAAAALGGTADLVAGIGWNARDAWWSLTGDP 62
Query 69 RAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAWVQPRLSPV 128
R WA L AV+FA G MD+LPS LPT LR +RY+RP +RR VR Y QPRL+
Sbjct 63 RVWADLHHVDAVVFAIGSMDTLPSPLPTYLRTGLRYLRPDPVRRVVRKAYLAAQPRLAVA 122
Query 129 ARA---ALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAGTVAAI 185
R LP LT +YL+ GA+ RP +PI LPSVH A YG H R AA+
Sbjct 123 LRGRPTVLPAKLTVQYLDTAVGALRVLRPELPIFGWLPSVHRAAAYGGVHTARPAAAAAM 182
Query 186 TEWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEAGVPNE 243
W+ +PL+DL+A V E +LSG GN DG+HW + H AV M LA P
Sbjct 183 AAWSSRAGVPLLDLEAVVGEHVLSGAGNPDGMHWGWPGHAAVGAAMSVLLAPVLAPGH 240
>gi|256375338|ref|YP_003098998.1| hypothetical protein Amir_1200 [Actinosynnema mirum DSM 43827]
gi|255919641|gb|ACU35152.1| hypothetical protein Amir_1200 [Actinosynnema mirum DSM 43827]
Length=243
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 111/231 (49%), Positives = 138/231 (60%), Gaps = 4/231 (1%)
Query 11 LLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDVWWAATQDPRA 70
LLV DSL ++GP G LPADDP +WPN+ A+ L EL+ GWT RD WWA T DPR
Sbjct 3 LLVLGDSLTFHGPAGPLPADDPGLWPNVAAAALGGRAELVAGFGWTARDAWWALTGDPRV 62
Query 71 WAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAWVQPRLSPVAR 130
WA LPR ++ A G MD+LPS LPT LR+ +RY+RP LRR R Y QP LS
Sbjct 63 WALLPRTDVLVLAVGHMDTLPSPLPTYLRQGLRYLRPDGLRRRARALYRAAQPVLSRATG 122
Query 131 A---ALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAGTVAAITE 187
ALPP LT YL + A+ RPG+P + +PSVH + Y H GRA A+ E
Sbjct 123 GRPVALPPALTRRYLSDSLRAVRQFRPGLPAVGMVPSVHRSPLYANVHTGRAAGERAVRE 182
Query 188 WAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEA 238
WA +PL+D+ A V + G GN DG+HW +E+H+AV M AL EA
Sbjct 183 WAAADGVPLLDVPALVRAHLRDGLGNPDGMHWGWESHRAVGTAM-AALVEA 232
>gi|331695849|ref|YP_004332088.1| hypothetical protein Psed_2007 [Pseudonocardia dioxanivorans
CB1190]
gi|326950538|gb|AEA24235.1| hypothetical protein Psed_2007 [Pseudonocardia dioxanivorans
CB1190]
Length=259
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/219 (48%), Positives = 131/219 (60%), Gaps = 7/219 (3%)
Query 11 LLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDVWWAATQDPRA 70
LLV ADSLA++GP PADDPR+WPN+ A+ L E++ GWT R W A T DPR
Sbjct 8 LLVLADSLAFHGPERAEPADDPRLWPNVAAAALGLRAEVVAGAGWTARHAWHALTHDPRV 67
Query 71 WAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRDGYAWVQPRLS-PVA 129
WA LP A++ GGMD+LPS LPTA+RELI +RP+ LRR VRDGY QPRL+ A
Sbjct 68 WAVLPCVEALVLGVGGMDALPSPLPTAVRELIPVLRPAPLRRVVRDGYLRAQPRLARAFA 127
Query 130 R------AALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAETYGKAHHGRAGTVA 183
R ALPP LT E+LE+ R + RP + + P+ H A YG AH GR
Sbjct 128 RLPGGGPVALPPRLTVEHLERCRAGVAALRPEVVVAVLTPAPHRAAVYGGAHPGRERAER 187
Query 184 AITEWAQHHDIPLVDLKAAVAEQILSGYGNRDGIHWNFE 222
A WA +VD+ A V + + +G+GN DG+HW +
Sbjct 188 ATRRWAAGSGAAVVDVVALVGDHVRAGHGNPDGMHWGWS 226
>gi|325000184|ref|ZP_08121296.1| hypothetical protein PseP1_15518 [Pseudonocardia sp. P1]
Length=104
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/74 (53%), Positives = 49/74 (67%), Gaps = 0/74 (0%)
Query 9 PALLVFADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGWTCRDVWWAATQDP 68
P LLV ADSLA++GP PAD+PR+WPN+ A++L EL+ R GWT R W A + DP
Sbjct 2 PDLLVVADSLAFHGPERPYPADEPRLWPNLAATRLGGRAELVARAGWTARHAWSAVSGDP 61
Query 69 RAWAALPRAGAVIF 82
R WA LP AV+
Sbjct 62 RVWAVLPHVDAVVL 75
>gi|325000736|ref|ZP_08121848.1| hypothetical protein PseP1_18292 [Pseudonocardia sp. P1]
Length=138
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/127 (42%), Positives = 70/127 (56%), Gaps = 8/127 (6%)
Query 117 GYAWVQPRLSPV-------ARAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPSVHIAE 169
GY QP L+P+ A LP LTA YLE+ R A+ RPG+P++A LPSVH A
Sbjct 1 GYRRAQPVLAPLLAELPGGGPATLPARLTASYLERCRSAVHALRPGLPVVALLPSVHRAA 60
Query 170 TYGKAHHGRAGTVAAITEWAQHH-DIPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVA 228
YG+ H RA T A+ WA + L+D A V +L G+GN DG+HW + H+AV
Sbjct 61 DYGRVHPHRAATETAMRAWAARAPGVTLLDTAALVGGHVLGGHGNPDGMHWGWAGHRAVG 120
Query 229 ELMLKAL 235
+ L
Sbjct 121 TALADEL 127
>gi|289669549|ref|ZP_06490624.1| restriction endonuclease-like protein [Xanthomonas campestris
pv. musacearum NCPPB4381]
Length=300
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/109 (32%), Positives = 50/109 (46%), Gaps = 12/109 (11%)
Query 105 VRPSWLRRWVRDGYAWVQPRLSPVARAALPPHLTAEYLEKTRGAIDFNRPGIPIIASLPS 164
+R LR R+G+A V R + AA P L AEY E G D N + + +LP+
Sbjct 92 IREDVLRNAYRNGFA-VGARGNGEVVAAFRPELIAEYAEHIEGIHDGNVAELEALNNLPN 150
Query 165 VHIAETYGKAHHGRAGTVAAITEWAQHHDIPLVDLKAAVAEQILSGYGN 213
+ I E + +GR V I + HD ++++LS YGN
Sbjct 151 IGIKEA--ELTYGRKKIVTEIVRAYRAHDF---------SKRVLSAYGN 188
>gi|288573444|ref|ZP_06391801.1| lipolytic protein G-D-S-L family [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288569185|gb|EFC90742.1| lipolytic protein G-D-S-L family [Dethiosulfovibrio peptidovorans
DSM 11002]
Length=360
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/46 (42%), Positives = 26/46 (57%), Gaps = 0/46 (0%)
Query 194 IPLVDLKAAVAEQILSGYGNRDGIHWNFEAHQAVAELMLKALAEAG 239
IP +DL+ ++ + G DG+HWN H VAE M KAL + G
Sbjct 309 IPFLDLREHLSRREDVGTLYFDGVHWNDRGHTVVAEYMEKALEDLG 354
>gi|89894130|ref|YP_517617.1| hypothetical protein DSY1384 [Desulfitobacterium hafniense Y51]
gi|89333578|dbj|BAE83173.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length=967
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 25/78 (33%), Positives = 40/78 (52%), Gaps = 10/78 (12%)
Query 95 PTALRELIRYVRPSWLRRWVRDGYAWVQPRLSPVARAALPPH---LTAEYLEKTRGAI-- 149
P ALREL R+++P LRR +D + P++ +AAL + YL++T+ I
Sbjct 699 PLALRELSRHIKPFILRRLKKDVLKELPPKIETEIKAALTEEQRKIYLAYLQQTKSQIAQ 758
Query 150 -----DFNRPGIPIIASL 162
F + I I+A+L
Sbjct 759 ELATHGFAKSQIQILAAL 776
>gi|219668528|ref|YP_002458963.1| non-specific serine/threonine protein kinase [Desulfitobacterium
hafniense DCB-2]
gi|219538788|gb|ACL20527.1| Non-specific serine/threonine protein kinase [Desulfitobacterium
hafniense DCB-2]
Length=1082
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 25/78 (33%), Positives = 40/78 (52%), Gaps = 10/78 (12%)
Query 95 PTALRELIRYVRPSWLRRWVRDGYAWVQPRLSPVARAALPPH---LTAEYLEKTRGAI-- 149
P ALREL R+++P LRR +D + P++ +AAL + YL++T+ I
Sbjct 814 PLALRELSRHIKPFILRRLKKDVLKELPPKIETEIKAALTEEQRKIYLAYLQQTKSQIAQ 873
Query 150 -----DFNRPGIPIIASL 162
F + I I+A+L
Sbjct 874 ELATHGFAKSQIQILAAL 891
>gi|308185962|ref|YP_003930093.1| acyl-CoA thioesterase I [Pantoea vagans C9-1]
gi|308056472|gb|ADO08644.1| acyl-CoA thioesterase I [Pantoea vagans C9-1]
Length=170
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/68 (42%), Positives = 36/68 (53%), Gaps = 8/68 (11%)
Query 174 AHHGRAGTVAAITEW---AQHHDIPLVDLKAAVAEQIL--SGYGNRDGIHWNFEAHQAVA 228
A++GR T A + AQ HDIPLV EQ+ G+ +DGIH N +A +A
Sbjct 100 ANYGRRYTEAFSGIYPGLAQQHDIPLVPF---FMEQVYLKPGWMQQDGIHPNPDAQPFIA 156
Query 229 ELMLKALA 236
LM K LA
Sbjct 157 GLMAKELA 164
>gi|170096602|ref|XP_001879521.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645889|gb|EDR10136.1| predicted protein [Laccaria bicolor S238N-H82]
Length=335
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/86 (30%), Positives = 41/86 (48%), Gaps = 15/86 (17%)
Query 34 IWPNIVASQLDWDLELIGRIGWTCRDVWWAAT------QDPRAWAALPRAGA----VIFA 83
IWP I+ QLD +E W +W+ +T Q PR +P+A A +
Sbjct 220 IWPQILQHQLDKFVEY-----WNNHKIWYQSTKPNMSGQTPRHVFMVPQAPAEDCCIEVP 274
Query 84 TGGMDSLPSVLPTALRELIRYVRPSW 109
+D+L + +P + E +R+V PS+
Sbjct 275 QDAVDALCNTIPVSRDEAMRWVDPSF 300
>gi|342874040|gb|EGU76115.1| hypothetical protein FOXB_13361 [Fusarium oxysporum Fo5176]
Length=349
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 36/131 (28%), Positives = 55/131 (42%), Gaps = 13/131 (9%)
Query 1 MSSRRGR-RPALLVF----ADSLAYYGPTGGLPADDPRIWPNIVASQLDWDLELIGRIGW 55
++SR R RPA+ +S+ Y LP P I+ S+L LI I W
Sbjct 48 LASRSTRWRPAIQALPAEILESIFLYSANVALPRSAP-----IIGSKLSGRATLIRFIIW 102
Query 56 TCRDVWWAATQDPRAWAALPRAGAVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVR 115
+D W + DP +AA+ + + + S LP E I + +W+ ++ R
Sbjct 103 AFQDTWEQSFGDPEKFAAIDKNR--VSGNWQLQSTILCLPWITAEFILQAQQTWVEKYAR 160
Query 116 DG-YAWVQPRL 125
D Y PRL
Sbjct 161 DQHYRHYLPRL 171
>gi|124267423|ref|YP_001021427.1| 3-demethylubiquinone-9 3-methyltransferase [Methylibium petroleiphilum
PM1]
gi|124260198|gb|ABM95192.1| 3-demethylubiquinone-9 3-methyltransferase [Methylibium petroleiphilum
PM1]
Length=253
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/38 (43%), Positives = 22/38 (58%), Gaps = 0/38 (0%)
Query 79 AVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVRD 116
A +FA G + L +LP E R++RPS L RW R+
Sbjct 179 AFLFAIVGAEYLLKLLPRGTHEYARFIRPSELARWCRE 216
>gi|327541560|gb|EGF28091.1| arylesterase protein [Rhodopirellula baltica WH47]
Length=214
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/94 (26%), Positives = 41/94 (44%), Gaps = 15/94 (15%)
Query 153 RPGIP----IIASLPSVH-----IAETYGKAHHGRAGTVAAITEWAQHHDIPLVDLKAAV 203
PG+P ++ + P+VH +A + A AG AI + + H D A
Sbjct 122 EPGMPTPKILLVAPPTVHHPILDMAAKFQNAETKSAGLADAIRKVSTEHSCEFFDAATAT 181
Query 204 AEQILSGYGNRDGIHWNFEAHQAVAELMLKALAE 237
++ DG+H + E HQA+ + + +AE
Sbjct 182 TTSVI------DGVHLDQEQHQALGKALASTIAE 209
>gi|220934702|ref|YP_002513601.1| 3-demethylubiquinone-9 3-O-methyltransferase [Thioalkalivibrio
sulfidophilus HL-EbGr7]
gi|219996012|gb|ACL72614.1| 3-demethylubiquinone-9 3-O-methyltransferase [Thioalkalivibrio
sulfidophilus HL-EbGr7]
Length=237
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/37 (44%), Positives = 22/37 (60%), Gaps = 0/37 (0%)
Query 79 AVIFATGGMDSLPSVLPTALRELIRYVRPSWLRRWVR 115
A +FA G + L +LP E R+++PS L RWVR
Sbjct 162 AFLFAIVGAEYLLRLLPRGTHEYARFIKPSELNRWVR 198
Lambda K H
0.321 0.136 0.446
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 349499277540
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40