BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2420c
Length=126
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609557|ref|NP_216936.1| hypothetical protein Rv2420c [Mycob... 255 2e-66
gi|121638301|ref|YP_978525.1| hypothetical protein BCG_2436c [My... 253 9e-66
gi|306776688|ref|ZP_07415025.1| hypothetical protein TMAG_02979 ... 252 1e-65
gi|289448062|ref|ZP_06437806.1| iojap protein 155 [Mycobacterium... 251 2e-65
gi|296170511|ref|ZP_06852097.1| Iojap family protein [Mycobacter... 212 1e-53
gi|126436111|ref|YP_001071802.1| iojap-like protein [Mycobacteri... 209 1e-52
gi|108800495|ref|YP_640692.1| Iojap-like protein [Mycobacterium ... 209 1e-52
gi|240170832|ref|ZP_04749491.1| hypothetical protein MkanA1_1608... 204 3e-51
gi|15827762|ref|NP_302025.1| hypothetical protein ML1453 [Mycoba... 200 5e-50
gi|289758550|ref|ZP_06517928.1| conserved hypothetical protein [... 199 1e-49
gi|254819849|ref|ZP_05224850.1| hypothetical protein MintA_07989... 198 2e-49
gi|118469765|ref|YP_888849.1| hypothetical protein MSMEG_4580 [M... 197 3e-49
gi|333990128|ref|YP_004522742.1| hypothetical protein JDM601_148... 196 7e-49
gi|118463750|ref|YP_880976.1| hypothetical protein MAV_1751 [Myc... 195 2e-48
gi|41408341|ref|NP_961177.1| hypothetical protein MAP2243c [Myco... 193 6e-48
gi|183983728|ref|YP_001852019.1| hypothetical protein MMAR_3748 ... 193 6e-48
gi|118618959|ref|YP_907291.1| bifunctional nicotinate-nucleotide... 193 7e-48
gi|342857824|ref|ZP_08714480.1| hypothetical protein MCOL_03080 ... 193 8e-48
gi|254774567|ref|ZP_05216083.1| hypothetical protein MaviaA2_078... 192 1e-47
gi|312140326|ref|YP_004007662.1| hypothetical protein REQ_29660 ... 187 6e-46
gi|54023344|ref|YP_117586.1| hypothetical protein nfa13770 [Noca... 186 1e-45
gi|120404879|ref|YP_954708.1| iojap-like protein [Mycobacterium ... 184 6e-45
gi|226307262|ref|YP_002767222.1| hypothetical protein RER_37750 ... 182 2e-44
gi|145223241|ref|YP_001133919.1| iojap-like protein [Mycobacteri... 180 5e-44
gi|111018306|ref|YP_701278.1| hypothetical protein RHA1_ro01296 ... 179 2e-43
gi|226360432|ref|YP_002778210.1| hypothetical protein ROP_10180 ... 176 1e-42
gi|262203083|ref|YP_003274291.1| iojap-like protein [Gordonia br... 170 6e-41
gi|169628712|ref|YP_001702361.1| hypothetical protein MAB_1622 [... 169 2e-40
gi|319948124|ref|ZP_08022287.1| hypothetical protein ES5_02239 [... 161 3e-38
gi|237785932|ref|YP_002906637.1| hypothetical protein ckrop_1353... 160 4e-38
gi|333918810|ref|YP_004492391.1| Iojap family protein [Amycolici... 160 8e-38
gi|269957037|ref|YP_003326826.1| iojap-like protein [Xylanimonas... 157 5e-37
gi|269125799|ref|YP_003299169.1| iojap-like protein [Thermomonos... 155 2e-36
gi|331695847|ref|YP_004332086.1| iojap-like protein [Pseudonocar... 152 1e-35
gi|119716055|ref|YP_923020.1| iojap-like protein [Nocardioides s... 152 2e-35
gi|317506544|ref|ZP_07964340.1| hypothetical protein HMPREF9336_... 150 5e-35
gi|297562296|ref|YP_003681270.1| iojap-like protein [Nocardiopsi... 150 7e-35
gi|326381581|ref|ZP_08203275.1| hypothetical protein SCNU_01480 ... 150 8e-35
gi|343926811|ref|ZP_08766304.1| hypothetical protein GOALK_072_0... 149 9e-35
gi|296270416|ref|YP_003653048.1| iojap-like protein [Thermobispo... 149 1e-34
gi|326332975|ref|ZP_08199232.1| iojap-like protein [Nocardioidac... 147 5e-34
gi|296393427|ref|YP_003658311.1| iojap-like protein [Segniliparu... 147 5e-34
gi|334337531|ref|YP_004542683.1| iojap-like protein [Isoptericol... 146 8e-34
gi|227488354|ref|ZP_03918670.1| iojap family protein [Corynebact... 145 2e-33
gi|296140501|ref|YP_003647744.1| iojap-like protein [Tsukamurell... 145 2e-33
gi|288922000|ref|ZP_06416209.1| iojap-like protein [Frankia sp. ... 144 3e-33
gi|256375336|ref|YP_003098996.1| iojap-like protein [Actinosynne... 144 3e-33
gi|227874883|ref|ZP_03993036.1| iojap family protein [Mobiluncus... 142 1e-32
gi|306818179|ref|ZP_07451910.1| Iojap family protein [Mobiluncus... 142 2e-32
gi|269976514|ref|ZP_06183499.1| iojap-like ribosome-associated p... 142 2e-32
>gi|15609557|ref|NP_216936.1| hypothetical protein Rv2420c [Mycobacterium tuberculosis H37Rv]
gi|15841939|ref|NP_336976.1| iojap-related protein [Mycobacterium tuberculosis CDC1551]
gi|31793599|ref|NP_856092.1| hypothetical protein Mb2443c [Mycobacterium bovis AF2122/97]
65 more sequence titles
Length=126
Score = 255 bits (651), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/126 (100%), Positives = 126/126 (100%), Gaps = 0/126 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE
Sbjct 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDLSA 120
EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDLSA
Sbjct 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDLSA 120
Query 121 NSAGAQ 126
NSAGAQ
Sbjct 121 NSAGAQ 126
>gi|121638301|ref|YP_978525.1| hypothetical protein BCG_2436c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224990795|ref|YP_002645482.1| hypothetical protein JTY_2430 [Mycobacterium bovis BCG str. Tokyo
172]
gi|121493949|emb|CAL72424.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224773908|dbj|BAH26714.1| hypothetical protein JTY_2430 [Mycobacterium bovis BCG str. Tokyo
172]
gi|341602339|emb|CCC65013.1| conserved hypothetical protein [Mycobacterium bovis BCG str.
Moreau RDJ]
Length=127
Score = 253 bits (645), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE
Sbjct 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDLSA 120
EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDLSA
Sbjct 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDLSA 120
Query 121 NSAGA 125
NSAGA
Sbjct 121 NSAGA 125
>gi|306776688|ref|ZP_07415025.1| hypothetical protein TMAG_02979 [Mycobacterium tuberculosis SUMu001]
gi|306972800|ref|ZP_07485461.1| hypothetical protein TMJG_00688 [Mycobacterium tuberculosis SUMu010]
gi|307080505|ref|ZP_07489675.1| hypothetical protein TMKG_00682 [Mycobacterium tuberculosis SUMu011]
gi|308214936|gb|EFO74335.1| hypothetical protein TMAG_02979 [Mycobacterium tuberculosis SUMu001]
gi|308357811|gb|EFP46662.1| hypothetical protein TMJG_00688 [Mycobacterium tuberculosis SUMu010]
gi|308361756|gb|EFP50607.1| hypothetical protein TMKG_00682 [Mycobacterium tuberculosis SUMu011]
Length=126
Score = 252 bits (643), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/126 (99%), Positives = 125/126 (99%), Gaps = 0/126 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE
Sbjct 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDLSA 120
EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQ QDDRNFYALDRLWGDCPVVPVDLSA
Sbjct 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQQQDDRNFYALDRLWGDCPVVPVDLSA 120
Query 121 NSAGAQ 126
NSAGAQ
Sbjct 121 NSAGAQ 126
>gi|289448062|ref|ZP_06437806.1| iojap protein 155 [Mycobacterium tuberculosis CPHL_A]
gi|289421020|gb|EFD18221.1| iojap protein 155 [Mycobacterium tuberculosis CPHL_A]
Length=126
Score = 251 bits (641), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/126 (99%), Positives = 125/126 (99%), Gaps = 0/126 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE
Sbjct 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDLSA 120
EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVV VDLSA
Sbjct 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVLVDLSA 120
Query 121 NSAGAQ 126
NSAGAQ
Sbjct 121 NSAGAQ 126
>gi|296170511|ref|ZP_06852097.1| Iojap family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295894823|gb|EFG74546.1| Iojap family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=128
Score = 212 bits (540), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 111/125 (89%), Positives = 117/125 (94%), Gaps = 0/125 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
MTA +EAIDMA VAAGAAA+KLADDVVVIDVSGQLVITDCFVIAS SNERQVNAIVDEVE
Sbjct 1 MTATQEAIDMASVAAGAAASKLADDVVVIDVSGQLVITDCFVIASASNERQVNAIVDEVE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDLSA 120
EKMR+AGY+PARREG REGRWTLLDYRDIVVHIQHQDDR+FYALDRLWGDCPVVPVDL+A
Sbjct 61 EKMRRAGYKPARREGTREGRWTLLDYRDIVVHIQHQDDRDFYALDRLWGDCPVVPVDLTA 120
Query 121 NSAGA 125
A
Sbjct 121 PEDSA 125
>gi|126436111|ref|YP_001071802.1| iojap-like protein [Mycobacterium sp. JLS]
gi|126235911|gb|ABN99311.1| iojap-like protein [Mycobacterium sp. JLS]
Length=133
Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/126 (82%), Positives = 111/126 (89%), Gaps = 0/126 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
MTA+ EAI MA VAA AA++KLADDVVVIDVSGQLVITDCFVIAS SNERQVNAIVDEVE
Sbjct 1 MTASDEAIQMATVAARAASSKLADDVVVIDVSGQLVITDCFVIASASNERQVNAIVDEVE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDLSA 120
EKMR AG++PARREG REGRWTLLDY DIVVHIQHQD+RNFYALDRLW DCP VPVDL
Sbjct 61 EKMRLAGHKPARREGTREGRWTLLDYVDIVVHIQHQDERNFYALDRLWRDCPTVPVDLDG 120
Query 121 NSAGAQ 126
+ A+
Sbjct 121 DEPLAR 126
>gi|108800495|ref|YP_640692.1| Iojap-like protein [Mycobacterium sp. MCS]
gi|119869634|ref|YP_939586.1| iojap-like protein [Mycobacterium sp. KMS]
gi|108770914|gb|ABG09636.1| Iojap-related protein [Mycobacterium sp. MCS]
gi|119695723|gb|ABL92796.1| iojap-like protein [Mycobacterium sp. KMS]
Length=122
Score = 209 bits (531), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/122 (85%), Positives = 109/122 (90%), Gaps = 0/122 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
MTA+ EAI MA VAA AA++KLADDVVVIDVSGQLVITDCFVIAS SNERQVNAIVDEVE
Sbjct 1 MTASDEAIQMATVAARAASSKLADDVVVIDVSGQLVITDCFVIASASNERQVNAIVDEVE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDLSA 120
EKMR AG++PARREG REGRWTLLDY DIVVHIQHQD+RNFYALDRLW DCP VPVDL
Sbjct 61 EKMRLAGHKPARREGTREGRWTLLDYVDIVVHIQHQDERNFYALDRLWRDCPTVPVDLDG 120
Query 121 NS 122
S
Sbjct 121 LS 122
>gi|240170832|ref|ZP_04749491.1| hypothetical protein MkanA1_16082 [Mycobacterium kansasii ATCC
12478]
Length=126
Score = 204 bits (520), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 111/126 (89%), Positives = 117/126 (93%), Gaps = 0/126 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
MTA +EAIDMA VAAGAAAAKLADDVVVIDVSGQLVITDCFVIAS SNERQVNAIVDEVE
Sbjct 1 MTATQEAIDMATVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASASNERQVNAIVDEVE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDLSA 120
EKMR+AGYRPARREGAREGRWTLLDYRDIVVH+QHQDDR+FYALDRLW DCPVVPV+L+
Sbjct 61 EKMRRAGYRPARREGAREGRWTLLDYRDIVVHVQHQDDRDFYALDRLWSDCPVVPVNLAP 120
Query 121 NSAGAQ 126
S Q
Sbjct 121 TSEDLQ 126
>gi|15827762|ref|NP_302025.1| hypothetical protein ML1453 [Mycobacterium leprae TN]
gi|221230239|ref|YP_002503655.1| hypothetical protein MLBr_01453 [Mycobacterium leprae Br4923]
gi|13093314|emb|CAC30403.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219933346|emb|CAR71547.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=129
Score = 200 bits (509), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 107/124 (87%), Positives = 112/124 (91%), Gaps = 1/124 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLV-ITDCFVIASGSNERQVNAIVDEV 59
M A +EAIDMA VAA AAAAKLA+DVVVIDVS QLV ITDCFVIAS SNERQVNAIVDEV
Sbjct 1 MNATKEAIDMATVAAAAAAAKLANDVVVIDVSEQLVGITDCFVIASASNERQVNAIVDEV 60
Query 60 EEKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDLS 119
EEKMRQAGYR ARREGAREGRWTLLDY DIVVHIQHQDDR+FYALDRLWGDC VVPVD+S
Sbjct 61 EEKMRQAGYRLARREGAREGRWTLLDYHDIVVHIQHQDDRDFYALDRLWGDCLVVPVDIS 120
Query 120 ANSA 123
+S
Sbjct 121 QHSG 124
>gi|289758550|ref|ZP_06517928.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|289714114|gb|EFD78126.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
Length=133
Score = 199 bits (505), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/101 (99%), Positives = 100/101 (99%), Gaps = 0/101 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE
Sbjct 25 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 84
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNF 101
EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDR F
Sbjct 85 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRKF 125
>gi|254819849|ref|ZP_05224850.1| hypothetical protein MintA_07989 [Mycobacterium intracellulare
ATCC 13950]
Length=131
Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/118 (91%), Positives = 111/118 (95%), Gaps = 0/118 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
M+A REAIDMA VAAGAAAAKLADDVVVIDVS QL ITDCFVIAS SNERQVNAIVDEVE
Sbjct 1 MSATREAIDMATVAAGAAAAKLADDVVVIDVSAQLAITDCFVIASASNERQVNAIVDEVE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDL 118
EKMR+AGY+PARREG REGRWTLLDYRDIVVHIQHQDDR+FYALDRLW DCPVVPVDL
Sbjct 61 EKMRKAGYKPARREGTREGRWTLLDYRDIVVHIQHQDDRDFYALDRLWSDCPVVPVDL 118
>gi|118469765|ref|YP_888849.1| hypothetical protein MSMEG_4580 [Mycobacterium smegmatis str.
MC2 155]
gi|118171052|gb|ABK71948.1| conserved domain protein [Mycobacterium smegmatis str. MC2 155]
Length=133
Score = 197 bits (502), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/118 (87%), Positives = 107/118 (91%), Gaps = 0/118 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
MTA EA+ MA VAA AAA+KLADDVVVIDVSGQLVITDCFVIAS SNERQVNAIVDEVE
Sbjct 1 MTATDEAVQMATVAAQAAASKLADDVVVIDVSGQLVITDCFVIASASNERQVNAIVDEVE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDL 118
EKMR AGY+PARREG REGRWTLLDY D+VVHIQHQD+RNFYALDRLW DCP VPVDL
Sbjct 61 EKMRLAGYKPARREGTREGRWTLLDYIDVVVHIQHQDERNFYALDRLWKDCPQVPVDL 118
>gi|333990128|ref|YP_004522742.1| hypothetical protein JDM601_1488 [Mycobacterium sp. JDM601]
gi|333486096|gb|AEF35488.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=128
Score = 196 bits (499), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 106/123 (87%), Positives = 109/123 (89%), Gaps = 0/123 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
MTA EAIDMARVAA AAAAKLA DVVVIDVS QLVITDCFVIAS SNERQVNAIVDEVE
Sbjct 1 MTAGSEAIDMARVAAVAAAAKLATDVVVIDVSDQLVITDCFVIASASNERQVNAIVDEVE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDLSA 120
EKMR AGY+PARREG REGRWTLLDY DIVVHIQHQD+R+FYALDRLW DCPVVPVDL
Sbjct 61 EKMRLAGYKPARREGTREGRWTLLDYVDIVVHIQHQDERDFYALDRLWKDCPVVPVDLGP 120
Query 121 NSA 123
A
Sbjct 121 APA 123
>gi|118463750|ref|YP_880976.1| hypothetical protein MAV_1751 [Mycobacterium avium 104]
gi|118165037|gb|ABK65934.1| conserved domain protein [Mycobacterium avium 104]
Length=131
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/121 (88%), Positives = 113/121 (94%), Gaps = 0/121 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
M+A +EAIDMA VAAGAAAAKLADDVVVIDVS QL ITDCFVIAS SNERQVNAIVDEVE
Sbjct 1 MSATQEAIDMATVAAGAAAAKLADDVVVIDVSAQLAITDCFVIASASNERQVNAIVDEVE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDLSA 120
EKMR+AGY+PARREGAREGRWTLLDYRDIVVHIQHQDDR+FYALDRLW DCPVVPV+L
Sbjct 61 EKMRKAGYKPARREGAREGRWTLLDYRDIVVHIQHQDDRDFYALDRLWSDCPVVPVNLDE 120
Query 121 N 121
+
Sbjct 121 D 121
>gi|41408341|ref|NP_961177.1| hypothetical protein MAP2243c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396697|gb|AAS04560.1| hypothetical protein MAP_2243c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336458221|gb|EGO37202.1| iojap-like ribosome-associated protein [Mycobacterium avium subsp.
paratuberculosis S397]
Length=131
Score = 193 bits (491), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 105/118 (89%), Positives = 112/118 (95%), Gaps = 0/118 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
M+A +EAIDMA VAAGAAAAKLADDVVVIDVS QL ITDCFVIAS SNERQVNAIVDEVE
Sbjct 1 MSATQEAIDMATVAAGAAAAKLADDVVVIDVSAQLAITDCFVIASASNERQVNAIVDEVE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDL 118
EKMR+AGY+PARREGAREGRWTLLDYRDIVVHIQH+DDR+FYALDRLW DCPVVPV+L
Sbjct 61 EKMRKAGYKPARREGAREGRWTLLDYRDIVVHIQHRDDRDFYALDRLWSDCPVVPVNL 118
>gi|183983728|ref|YP_001852019.1| hypothetical protein MMAR_3748 [Mycobacterium marinum M]
gi|183177054|gb|ACC42164.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=129
Score = 193 bits (491), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 105/122 (87%), Positives = 114/122 (94%), Gaps = 0/122 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
M+A +EAIDMA VAAGAA+AKLADDV+VIDVSGQLVITDCFVIAS SNERQVNAIVDEVE
Sbjct 1 MSATQEAIDMATVAAGAASAKLADDVLVIDVSGQLVITDCFVIASASNERQVNAIVDEVE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDLSA 120
EKMR+AGY+ ARREGAREGRWTLLDYRDIVVH+QHQDDR+FYALDRLW DCPVV VDL+
Sbjct 61 EKMRRAGYKLARREGAREGRWTLLDYRDIVVHVQHQDDRSFYALDRLWADCPVVAVDLAE 120
Query 121 NS 122
S
Sbjct 121 GS 122
>gi|118618959|ref|YP_907291.1| bifunctional nicotinate-nucleotide adenylyltransferase NadD/hypothetical
protein [Mycobacterium ulcerans Agy99]
gi|118571069|gb|ABL05820.1| nicotinate-nucleotide adenylyltransferase NadD fused with d/s
conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=344
Score = 193 bits (490), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 105/122 (87%), Positives = 114/122 (94%), Gaps = 0/122 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
M+A +EAIDMA VAAGAA+AKLADDV+VIDVSGQLVITDCFVIAS SNERQVNAIVDEVE
Sbjct 216 MSATQEAIDMATVAAGAASAKLADDVLVIDVSGQLVITDCFVIASASNERQVNAIVDEVE 275
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDLSA 120
EKMR+AGY+ ARREGAREGRWTLLDYRDIVVH+QHQDDR+FYALDRLW DCPVV VDL+
Sbjct 276 EKMRRAGYKLARREGAREGRWTLLDYRDIVVHVQHQDDRSFYALDRLWADCPVVAVDLAE 335
Query 121 NS 122
S
Sbjct 336 GS 337
>gi|342857824|ref|ZP_08714480.1| hypothetical protein MCOL_03080 [Mycobacterium colombiense CECT
3035]
gi|342135157|gb|EGT88323.1| hypothetical protein MCOL_03080 [Mycobacterium colombiense CECT
3035]
Length=131
Score = 193 bits (490), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 103/126 (82%), Positives = 114/126 (91%), Gaps = 0/126 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
M+A +EAIDMA VAAGAAAAKLADDVVVIDVS QL ITDCFVIAS SNERQVNAIVDEVE
Sbjct 1 MSATQEAIDMATVAAGAAAAKLADDVVVIDVSAQLAITDCFVIASASNERQVNAIVDEVE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDLSA 120
EKMR+AGY+PARREG REGRWTLLDYRDIVVHIQH++DR+FYALDRLW DCP+VPV+L A
Sbjct 61 EKMRKAGYKPARREGTREGRWTLLDYRDIVVHIQHREDRDFYALDRLWSDCPMVPVELDA 120
Query 121 NSAGAQ 126
++
Sbjct 121 RPGNSE 126
>gi|254774567|ref|ZP_05216083.1| hypothetical protein MaviaA2_07838 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=131
Score = 192 bits (488), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/121 (87%), Positives = 112/121 (93%), Gaps = 0/121 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
M+A +EAIDMA VAAGAAAAKLADDVVVIDVS QL IT CFVIAS SNERQVNAIVDEVE
Sbjct 1 MSATQEAIDMATVAAGAAAAKLADDVVVIDVSAQLAITGCFVIASASNERQVNAIVDEVE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDLSA 120
EKMR+AGY+PARREGAREGRWTLLDYRDIVVHIQHQDDR+FYALDRLW DCPVVPV+L
Sbjct 61 EKMRKAGYKPARREGAREGRWTLLDYRDIVVHIQHQDDRDFYALDRLWSDCPVVPVNLDE 120
Query 121 N 121
+
Sbjct 121 D 121
>gi|312140326|ref|YP_004007662.1| hypothetical protein REQ_29660 [Rhodococcus equi 103S]
gi|325677098|ref|ZP_08156767.1| Iojap family protein [Rhodococcus equi ATCC 33707]
gi|311889665|emb|CBH48982.1| conserved hypothetical protein [Rhodococcus equi 103S]
gi|325552083|gb|EGD21776.1| Iojap family protein [Rhodococcus equi ATCC 33707]
Length=138
Score = 187 bits (474), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 87/117 (75%), Positives = 104/117 (89%), Gaps = 0/117 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
M+A+ +AI+MAR+AA AA KLA DVVV+DVS QLVITDCFVIAS +NERQVNAIVD VE
Sbjct 1 MSASNDAIEMARIAALAADEKLASDVVVLDVSEQLVITDCFVIASAANERQVNAIVDNVE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVD 117
+K+R+AG++P RREGAREGRW L+D+ DIVVHIQH D+RNFYALDRLW DCPV+PV+
Sbjct 61 DKLREAGHKPVRREGAREGRWALIDFVDIVVHIQHTDERNFYALDRLWKDCPVIPVE 117
>gi|54023344|ref|YP_117586.1| hypothetical protein nfa13770 [Nocardia farcinica IFM 10152]
gi|54014852|dbj|BAD56222.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=134
Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/117 (77%), Positives = 101/117 (87%), Gaps = 0/117 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
M+A+ EAI+MA VAA AA KLA DVVV+DVS QLVITDCFVIAS NERQVNAIVD VE
Sbjct 1 MSASAEAIEMAEVAARAADEKLASDVVVLDVSEQLVITDCFVIASAPNERQVNAIVDNVE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVD 117
EK+R+AG++P RREG REGRW LLDY D+VVHIQH D+RNFYAL+RLW DCPVVPV+
Sbjct 61 EKLRRAGHKPVRREGTREGRWALLDYVDVVVHIQHNDERNFYALERLWKDCPVVPVE 117
>gi|120404879|ref|YP_954708.1| iojap-like protein [Mycobacterium vanbaalenii PYR-1]
gi|119957697|gb|ABM14702.1| iojap-like protein [Mycobacterium vanbaalenii PYR-1]
Length=121
Score = 184 bits (466), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 88/97 (91%), Positives = 91/97 (94%), Gaps = 0/97 (0%)
Query 24 DDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVEEKMRQAGYRPARREGAREGRWTL 83
+DVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVEEKMR AGY+PARREG REGRWTL
Sbjct 15 EDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVEEKMRLAGYKPARREGTREGRWTL 74
Query 84 LDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDLSA 120
LDY DIVVHIQHQD+RNFYALDRLW DCP VPVDL A
Sbjct 75 LDYVDIVVHIQHQDERNFYALDRLWRDCPTVPVDLDA 111
>gi|226307262|ref|YP_002767222.1| hypothetical protein RER_37750 [Rhodococcus erythropolis PR4]
gi|229493169|ref|ZP_04386961.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|226186379|dbj|BAH34483.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
gi|229319900|gb|EEN85729.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=148
Score = 182 bits (461), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/125 (69%), Positives = 104/125 (84%), Gaps = 1/125 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
M+AN EAIDMAR+AA AA KLA +VVV+DVS QLVITDCFVIAS +NERQVN+IV+ +E
Sbjct 1 MSANTEAIDMARIAALAADEKLATEVVVLDVSEQLVITDCFVIASATNERQVNSIVENIE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVD-LS 119
+++R+AG++P RREG REGRW LLDY DIVVH+QH ++RNFYALDRLW DCP V V+ L
Sbjct 61 DRLREAGHKPVRREGTREGRWALLDYADIVVHVQHDEERNFYALDRLWKDCPTVEVEGLG 120
Query 120 ANSAG 124
N G
Sbjct 121 QNRPG 125
>gi|145223241|ref|YP_001133919.1| iojap-like protein [Mycobacterium gilvum PYR-GCK]
gi|315443699|ref|YP_004076578.1| iojap-related protein [Mycobacterium sp. Spyr1]
gi|145215727|gb|ABP45131.1| iojap-like protein [Mycobacterium gilvum PYR-GCK]
gi|315262002|gb|ADT98743.1| iojap-related protein [Mycobacterium sp. Spyr1]
Length=120
Score = 180 bits (457), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 84/103 (82%), Positives = 95/103 (93%), Gaps = 0/103 (0%)
Query 24 DDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVEEKMRQAGYRPARREGAREGRWTL 83
+DVVVIDVS QLVITDCFVIASGSN+RQVNAIVDEVEEKMR+AGY+PARREG REGRWTL
Sbjct 15 EDVVVIDVSEQLVITDCFVIASGSNDRQVNAIVDEVEEKMRRAGYKPARREGTREGRWTL 74
Query 84 LDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDLSANSAGAQ 126
LDY DIVVH+QHQD+RNFYALDRLW DCP+VPVDL + + ++
Sbjct 75 LDYVDIVVHVQHQDERNFYALDRLWRDCPIVPVDLDSPAGDSE 117
>gi|111018306|ref|YP_701278.1| hypothetical protein RHA1_ro01296 [Rhodococcus jostii RHA1]
gi|110817836|gb|ABG93120.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=141
Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 81/117 (70%), Positives = 99/117 (85%), Gaps = 0/117 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
M+A EAI+MAR+AA AA KLA DVVV+DVS QLVITDCFVIAS NERQVNAIV+ +E
Sbjct 1 MSATTEAIEMARIAAVAADEKLASDVVVLDVSEQLVITDCFVIASAPNERQVNAIVENIE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVD 117
+++R AG++P RREG REGRW LLD+ D+V+H+QH ++RNFYALDRLW DCP VPV+
Sbjct 61 DRLRDAGHKPVRREGTREGRWALLDFVDVVIHVQHNEERNFYALDRLWKDCPTVPVE 117
>gi|226360432|ref|YP_002778210.1| hypothetical protein ROP_10180 [Rhodococcus opacus B4]
gi|226238917|dbj|BAH49265.1| hypothetical protein [Rhodococcus opacus B4]
Length=148
Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 80/117 (69%), Positives = 99/117 (85%), Gaps = 0/117 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
M+A EAI+MAR+AA AA KLA DVVV+DVS QLVITDCFVIAS NERQVNAIV+ +E
Sbjct 1 MSATTEAIEMARIAAVAADEKLASDVVVLDVSEQLVITDCFVIASAPNERQVNAIVENIE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVD 117
+++R+AG++P RREG REGRW LLD+ D+V+H+QH ++RNFYALDRLW DCP V V+
Sbjct 61 DRLREAGHKPVRREGTREGRWALLDFVDVVIHVQHNEERNFYALDRLWKDCPAVAVE 117
>gi|262203083|ref|YP_003274291.1| iojap-like protein [Gordonia bronchialis DSM 43247]
gi|262086430|gb|ACY22398.1| iojap-like protein [Gordonia bronchialis DSM 43247]
Length=120
Score = 170 bits (431), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/122 (72%), Positives = 102/122 (84%), Gaps = 2/122 (1%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
MTA+ +A+DMARVAA AA KLA DV VIDVS QLVITD FVIAS NERQVNAIVDE+E
Sbjct 1 MTASAQALDMARVAAAAAEDKLAHDVTVIDVSEQLVITDLFVIASADNERQVNAIVDEIE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDLSA 120
+K+R+AG++P RREG REGRW LLDY D+VVHIQH ++R FYAL+RLW DCPV VDL +
Sbjct 61 DKLREAGHKPVRREGTREGRWALLDYIDVVVHIQHSEERAFYALERLWQDCPV--VDLGS 118
Query 121 NS 122
+S
Sbjct 119 SS 120
>gi|169628712|ref|YP_001702361.1| hypothetical protein MAB_1622 [Mycobacterium abscessus ATCC 19977]
gi|169240679|emb|CAM61707.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=137
Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/123 (73%), Positives = 107/123 (87%), Gaps = 0/123 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
MTA EA+++A +AA AAA+KLA DVVVIDVS QLVITDCFVIAS SNERQVNAIVD+VE
Sbjct 1 MTAVAEAVELATLAAQAAASKLASDVVVIDVSEQLVITDCFVIASASNERQVNAIVDQVE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDLSA 120
E +R+AG++P RREG REGRWTLLDY D+VVH+QH+++RN+YAL+RLW DCP +PVDL A
Sbjct 61 EVLRRAGHKPVRREGGREGRWTLLDYVDVVVHVQHEEERNYYALERLWRDCPTIPVDLDA 120
Query 121 NSA 123
A
Sbjct 121 LPA 123
>gi|319948124|ref|ZP_08022287.1| hypothetical protein ES5_02239 [Dietzia cinnamea P4]
gi|319438192|gb|EFV93149.1| hypothetical protein ES5_02239 [Dietzia cinnamea P4]
Length=147
Score = 161 bits (408), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/117 (66%), Positives = 100/117 (86%), Gaps = 0/117 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
MTA+ EA++MA VAA AA KLA D+VVIDVS QLVITDCFV+AS ERQVN++V+E+E
Sbjct 1 MTASPEALEMAAVAARAADDKLATDIVVIDVSDQLVITDCFVLASADTERQVNSVVEEIE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVD 117
+K+R+AG++P RREG REGRW LLDY ++VVH+QH D+R++Y+LDRLW DCPVV ++
Sbjct 61 DKLREAGHKPLRREGTREGRWALLDYNELVVHVQHVDERDYYSLDRLWKDCPVVEIE 117
>gi|237785932|ref|YP_002906637.1| hypothetical protein ckrop_1353 [Corynebacterium kroppenstedtii
DSM 44385]
gi|237758844|gb|ACR18094.1| hypothetical protein ckrop_1353 [Corynebacterium kroppenstedtii
DSM 44385]
Length=155
Score = 160 bits (406), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 70/117 (60%), Positives = 95/117 (82%), Gaps = 0/117 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
M A+ E++ MA++AA AA+ K+A D+VV+DVSGQLVITDCFV+ SG NER V +I DE+E
Sbjct 1 MAASEESVSMAQIAARAASDKIASDIVVLDVSGQLVITDCFVVCSGDNERHVMSIADEIE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVD 117
+K+ +AG++P RREG+RE RW LLDY DIVVH+Q + +R+FY LD LW DCPV+ ++
Sbjct 61 DKLAEAGHKPVRREGSREARWVLLDYNDIVVHVQREPERDFYGLDSLWKDCPVIEIE 117
>gi|333918810|ref|YP_004492391.1| Iojap family protein [Amycolicicoccus subflavus DQS3-9A1]
gi|333481031|gb|AEF39591.1| Iojap family protein [Amycolicicoccus subflavus DQS3-9A1]
Length=126
Score = 160 bits (404), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 76/100 (76%), Positives = 87/100 (87%), Gaps = 1/100 (1%)
Query 25 DVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVEEKMRQAGYRPARREGAREGRWTLL 84
+VVV+DVS QLVITDCFVIASGSNERQV AIVD VEEK+R+AG++PARREGAREGRW LL
Sbjct 25 NVVVLDVSEQLVITDCFVIASGSNERQVTAIVDSVEEKLREAGHKPARREGAREGRWALL 84
Query 85 DYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVD-LSANSA 123
DY D+VVHIQH D+RNFY L+RLW DCP + V+ L A SA
Sbjct 85 DYVDVVVHIQHDDERNFYGLERLWKDCPAIEVEGLDAGSA 124
>gi|269957037|ref|YP_003326826.1| iojap-like protein [Xylanimonas cellulosilytica DSM 15894]
gi|269305718|gb|ACZ31268.1| iojap-like protein [Xylanimonas cellulosilytica DSM 15894]
Length=130
Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/127 (60%), Positives = 99/127 (78%), Gaps = 2/127 (1%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
MTA A+++A VAA AA+ AD+++ +DVS QLV+TD F+IASG+NERQV+AIVD VE
Sbjct 1 MTATERAVELAVVAARAASNLKADEIIALDVSEQLVLTDVFLIASGTNERQVSAIVDAVE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPV--DL 118
E M +AG +P RREG EGRW LLD+ ++VVH+QH +DR +YAL+RLW DCPVVP+ D+
Sbjct 61 EAMFKAGAKPIRREGKSEGRWVLLDFGEVVVHVQHAEDRVYYALERLWKDCPVVPLPADV 120
Query 119 SANSAGA 125
+ AGA
Sbjct 121 TEPPAGA 127
>gi|269125799|ref|YP_003299169.1| iojap-like protein [Thermomonospora curvata DSM 43183]
gi|268310757|gb|ACY97131.1| iojap-like protein [Thermomonospora curvata DSM 43183]
Length=139
Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/127 (56%), Positives = 97/127 (77%), Gaps = 1/127 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
MTA+ A ++ R+AA AA KLADD++ DVS QLVITD F++ S N+RQV AIVDE+E
Sbjct 1 MTASDRAAELVRIAAEAAGDKLADDIIAYDVSEQLVITDAFLLCSAPNDRQVRAIVDEIE 60
Query 61 EKMRQ-AGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDLS 119
+++R+ A +P RREG REGRW LLDY D+++H+QHQ++R FYAL+RLW DCPV+P+ +
Sbjct 61 KRLREEADAKPVRREGEREGRWILLDYLDVIIHVQHQEERAFYALERLWKDCPVIPLPQA 120
Query 120 ANSAGAQ 126
+ AQ
Sbjct 121 VTAHAAQ 127
>gi|331695847|ref|YP_004332086.1| iojap-like protein [Pseudonocardia dioxanivorans CB1190]
gi|326950536|gb|AEA24233.1| iojap-like protein [Pseudonocardia dioxanivorans CB1190]
Length=140
Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/114 (68%), Positives = 93/114 (82%), Gaps = 0/114 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
MTA +AI+MARVA AAA K A D++V+DVS QLVITDCFV+AS NERQV+AIVD +E
Sbjct 1 MTATDQAIEMARVAVAAAADKKAVDILVLDVSEQLVITDCFVLASAPNERQVSAIVDGIE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVV 114
EK+R+ G +P RREG REGRW LLD+ DIVVH+QH ++R FY LDRLW DCPV+
Sbjct 61 EKLREHGVKPTRREGTREGRWVLLDFTDIVVHVQHTEERGFYGLDRLWKDCPVL 114
>gi|119716055|ref|YP_923020.1| iojap-like protein [Nocardioides sp. JS614]
gi|119536716|gb|ABL81333.1| iojap-like protein [Nocardioides sp. JS614]
Length=127
Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/126 (54%), Positives = 95/126 (76%), Gaps = 2/126 (1%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
MTA A+++ AA AA+ KLA ++ DVS QL ITD F++AS SN+RQV AIVDE+E
Sbjct 1 MTATDRAVELVHTAARAASEKLAQQLIAFDVSEQLAITDAFLLASASNDRQVKAIVDEIE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPV--DL 118
+K+R+ G +P RREG R+GRW L+DY ++VVH+QH+++R FYAL+RLW DCP +P+ D+
Sbjct 61 DKLREIGAKPLRREGERDGRWVLIDYGEVVVHVQHEEERQFYALERLWRDCPAIPLPADV 120
Query 119 SANSAG 124
+A G
Sbjct 121 TAAEQG 126
>gi|317506544|ref|ZP_07964340.1| hypothetical protein HMPREF9336_00710 [Segniliparus rugosus ATCC
BAA-974]
gi|316255160|gb|EFV14434.1| hypothetical protein HMPREF9336_00710 [Segniliparus rugosus ATCC
BAA-974]
Length=134
Score = 150 bits (380), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/114 (66%), Positives = 91/114 (80%), Gaps = 0/114 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
MTA EA+D+AR+AA AA KLA DVV+IDVS +L ITDCFVIAS NER VNAIV+ V+
Sbjct 1 MTATPEAVDLARIAAAAAEDKLASDVVIIDVSERLAITDCFVIASAPNERHVNAIVEAVD 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVV 114
E +R+AG++ RREG R GRW LLD D+VVH+QH+D+R FY+LDRLW DCP V
Sbjct 61 EAVRRAGHKVVRREGERSGRWALLDAVDVVVHVQHRDEREFYSLDRLWKDCPKV 114
>gi|297562296|ref|YP_003681270.1| iojap-like protein [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
gi|296846744|gb|ADH68764.1| iojap-like protein [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
Length=132
Score = 150 bits (379), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 74/127 (59%), Positives = 96/127 (76%), Gaps = 3/127 (2%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
MTA A+++ RVAA AA+ KLA +++ DVS QLVIT+ FV+ S N+RQV AIVDEVE
Sbjct 1 MTATDRALELVRVAAEAASDKLAQEIIAYDVSEQLVITEAFVLCSAPNDRQVRAIVDEVE 60
Query 61 EKMR-QAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDLS 119
+++R QAG +P RREG R+GRW LLDY DIVVHIQH+++R +Y L+RLW DCP +DL
Sbjct 61 DQLRLQAGAKPVRREGERDGRWVLLDYADIVVHIQHEEERGYYGLERLWKDCP--EIDLP 118
Query 120 ANSAGAQ 126
+ GAQ
Sbjct 119 EGARGAQ 125
>gi|326381581|ref|ZP_08203275.1| hypothetical protein SCNU_01480 [Gordonia neofelifaecis NRRL
B-59395]
gi|326199828|gb|EGD57008.1| hypothetical protein SCNU_01480 [Gordonia neofelifaecis NRRL
B-59395]
Length=138
Score = 150 bits (378), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/117 (62%), Positives = 93/117 (80%), Gaps = 0/117 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
MTA+ EA M +AA AAA K+A D+V IDVS LVITD F IAS NERQVN+IV+E+E
Sbjct 1 MTASAEARQMVTIAALAAADKVATDIVAIDVSETLVITDAFFIASADNERQVNSIVEEIE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVD 117
+K+R++G++ RREG REGRW LLDY D+VVH+QH D+R+FY L+RLW DCP++ +D
Sbjct 61 DKLRESGHKALRREGTREGRWALLDYGDLVVHVQHDDERDFYGLERLWKDCPIIEID 117
>gi|343926811|ref|ZP_08766304.1| hypothetical protein GOALK_072_00330 [Gordonia alkanivorans NBRC
16433]
gi|343763171|dbj|GAA13230.1| hypothetical protein GOALK_072_00330 [Gordonia alkanivorans NBRC
16433]
Length=111
Score = 149 bits (377), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 69/93 (75%), Positives = 79/93 (85%), Gaps = 0/93 (0%)
Query 25 DVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVEEKMRQAGYRPARREGAREGRWTLL 84
+V VIDVS QLVITD FVIAS NERQVN+IVDEVEEK+R+AG++P RREG REGRW LL
Sbjct 16 EVTVIDVSEQLVITDAFVIASADNERQVNSIVDEVEEKLREAGHKPLRREGTREGRWALL 75
Query 85 DYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVD 117
DY +IVVHIQH D+R FYAL+ LW DCPVV V+
Sbjct 76 DYAEIVVHIQHTDERRFYALESLWKDCPVVEVE 108
>gi|296270416|ref|YP_003653048.1| iojap-like protein [Thermobispora bispora DSM 43833]
gi|296093203|gb|ADG89155.1| iojap-like protein [Thermobispora bispora DSM 43833]
Length=134
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/127 (60%), Positives = 96/127 (76%), Gaps = 1/127 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
MTA+ ++ + R+AA AAA KLADD++ DVS +LVITD F++ S SN+RQV A+VDE+E
Sbjct 1 MTASERSLQLIRIAAEAAAEKLADDIIAYDVSDRLVITDAFLLCSASNDRQVRAVVDEIE 60
Query 61 EKMR-QAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDLS 119
E++R QA +P RREG REGRW LLDY DIVVH+QH+ DR FYAL+RLW DCP + + S
Sbjct 61 ERLRVQADAKPVRREGEREGRWVLLDYLDIVVHVQHEQDRRFYALERLWKDCPPIQLPES 120
Query 120 ANSAGAQ 126
A AQ
Sbjct 121 VALAAAQ 127
>gi|326332975|ref|ZP_08199232.1| iojap-like protein [Nocardioidaceae bacterium Broad-1]
gi|325949333|gb|EGD41416.1| iojap-like protein [Nocardioidaceae bacterium Broad-1]
Length=124
Score = 147 bits (371), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/124 (57%), Positives = 89/124 (72%), Gaps = 2/124 (1%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
MTA AI++ AA AA+ K A ++ DVS QL ITD FV+AS NERQV +IVDEVE
Sbjct 1 MTATEHAIELTITAARAASEKKAAHIMAFDVSDQLAITDAFVLASAPNERQVQSIVDEVE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVV--PVDL 118
K+R G +P RREG +EGRW LLDY +IVVH+QH+++R FYAL+RLW DCP + P D+
Sbjct 61 LKLRDLGSKPLRREGHKEGRWVLLDYGEIVVHVQHEEERQFYALERLWRDCPSISLPADV 120
Query 119 SANS 122
+ S
Sbjct 121 VSES 124
>gi|296393427|ref|YP_003658311.1| iojap-like protein [Segniliparus rotundus DSM 44985]
gi|296180574|gb|ADG97480.1| iojap-like protein [Segniliparus rotundus DSM 44985]
Length=133
Score = 147 bits (371), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/114 (65%), Positives = 89/114 (79%), Gaps = 0/114 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
MTA EAI++ARVAA AA KLA DVV+IDVS +L ITDCFV+AS NER VNA+V+ VE
Sbjct 1 MTARPEAIELARVAAAAAEDKLASDVVIIDVSERLAITDCFVLASAPNERHVNAVVEAVE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVV 114
+ +R AG++ RREG R GRW LLD D+VVH+QH ++R FY+LDRLW DCP V
Sbjct 61 DALRLAGHKAVRREGERSGRWALLDAVDVVVHVQHLEEREFYSLDRLWKDCPKV 114
>gi|334337531|ref|YP_004542683.1| iojap-like protein [Isoptericola variabilis 225]
gi|334107899|gb|AEG44789.1| iojap-like protein [Isoptericola variabilis 225]
Length=148
Score = 146 bits (369), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 67/114 (59%), Positives = 90/114 (79%), Gaps = 0/114 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
MTA A+++A VAA AA+ + A +++ +DVS QLV+TD F+IASG+NERQV+AIVD VE
Sbjct 1 MTATERAVELAIVAARAASDRKAQEIIALDVSEQLVLTDVFLIASGTNERQVSAIVDAVE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVV 114
E+M +AG +P RREG E RW LLD+ D+VVH+QH +DR +YAL+RLW DCP +
Sbjct 61 EQMYKAGAKPIRREGKAEARWVLLDFGDVVVHVQHAEDRVYYALERLWKDCPAI 114
>gi|227488354|ref|ZP_03918670.1| iojap family protein [Corynebacterium glucuronolyticum ATCC 51867]
gi|227542967|ref|ZP_03973016.1| iojap family protein [Corynebacterium glucuronolyticum ATCC 51866]
gi|227091568|gb|EEI26880.1| iojap family protein [Corynebacterium glucuronolyticum ATCC 51867]
gi|227181189|gb|EEI62161.1| iojap family protein [Corynebacterium glucuronolyticum ATCC 51866]
Length=146
Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/108 (61%), Positives = 84/108 (78%), Gaps = 0/108 (0%)
Query 10 MARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVEEKMRQAGYR 69
MA VAA AA KLA ++ V+DV+ L ITD FVIAS ERQV AIVDE+E +M++AGY+
Sbjct 1 MATVAARAADEKLATNIAVLDVTQPLTITDLFVIASAETERQVQAIVDEIEFQMKEAGYK 60
Query 70 PARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVD 117
PA+REG RE RW+LLDY DIVVH+ ++R FY LD+L+ DCP+VP++
Sbjct 61 PAKREGVRESRWSLLDYTDIVVHVMRDEEREFYGLDKLYADCPIVPIE 108
>gi|296140501|ref|YP_003647744.1| iojap-like protein [Tsukamurella paurometabola DSM 20162]
gi|296028635|gb|ADG79405.1| iojap-like protein [Tsukamurella paurometabola DSM 20162]
Length=135
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/117 (64%), Positives = 94/117 (81%), Gaps = 0/117 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
MTA+ A ++ VAA AA KLA DVVV+DVS QLV+T+ FVIAS SNERQVNAIV+EVE
Sbjct 1 MTASENARRLSAVAALAADDKLATDVVVLDVSEQLVLTEAFVIASASNERQVNAIVEEVE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVD 117
+K+R+ G +P RREG REGRW LLD+ DIVVH+ HQ++R +YAL++LW DCP + V+
Sbjct 61 DKLREIGVKPTRREGTREGRWALLDFLDIVVHVFHQEEREYYALEKLWKDCPHIEVE 117
>gi|288922000|ref|ZP_06416209.1| iojap-like protein [Frankia sp. EUN1f]
gi|288346662|gb|EFC80982.1| iojap-like protein [Frankia sp. EUN1f]
Length=129
Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/125 (58%), Positives = 93/125 (75%), Gaps = 0/125 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
MTA+ A+++A AA AA K+ D++V+DVS +L ITDCFVIAS NERQV AIVDE+E
Sbjct 1 MTASPRAVELALAAAQTAADKIGQDILVLDVSERLAITDCFVIASADNERQVKAIVDEIE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDLSA 120
EK+R G +P RREG R+GRW LLD+ DIVVH+Q ++R +Y L+RLW DCPV+P +A
Sbjct 61 EKLRALGAKPLRREGERDGRWVLLDFADIVVHVQRAEEREYYGLERLWKDCPVIPFTDAA 120
Query 121 NSAGA 125
GA
Sbjct 121 VGVGA 125
>gi|256375336|ref|YP_003098996.1| iojap-like protein [Actinosynnema mirum DSM 43827]
gi|255919639|gb|ACU35150.1| iojap-like protein [Actinosynnema mirum DSM 43827]
Length=148
Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/122 (64%), Positives = 94/122 (78%), Gaps = 0/122 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
M A EA +A VAA AA+ K A DV+++DVS QLVITDCFVIAS NERQV AIVD VE
Sbjct 1 MAATDEARRLALVAANAASDKKAHDVILLDVSEQLVITDCFVIASAPNERQVGAIVDGVE 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDLSA 120
EK+R+AG +P RREGAREGRW LLD+ D+VVH+QH ++R+FY L+RLW DCP + D
Sbjct 61 EKLREAGRKPVRREGAREGRWVLLDFVDVVVHVQHSEERSFYGLERLWKDCPRIEFDAGP 120
Query 121 NS 122
+S
Sbjct 121 SS 122
>gi|227874883|ref|ZP_03993036.1| iojap family protein [Mobiluncus mulieris ATCC 35243]
gi|227844658|gb|EEJ54814.1| iojap family protein [Mobiluncus mulieris ATCC 35243]
Length=159
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/116 (57%), Positives = 89/116 (77%), Gaps = 0/116 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
M+A+ +AI +A +A AA +K A +V+ +DVS +L +TD F++ASG+NERQV AIV+ V+
Sbjct 1 MSADSQAIQLAILAGLAAKSKKATEVIALDVSARLALTDIFILASGNNERQVRAIVEAVD 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPV 116
E M + G R ARREG +E RW LLDY +IVVH+QH+ DR FYAL+RLW D PVVP+
Sbjct 61 ETMSRHGVRLARREGFQECRWVLLDYGEIVVHVQHESDRQFYALERLWADAPVVPI 116
>gi|306818179|ref|ZP_07451910.1| Iojap family protein [Mobiluncus mulieris ATCC 35239]
gi|304649143|gb|EFM46437.1| Iojap family protein [Mobiluncus mulieris ATCC 35239]
Length=159
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/116 (57%), Positives = 89/116 (77%), Gaps = 0/116 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
M+A+ +AI +A +A AA +K A +V+ +DVS +L +TD F++ASG+NERQV AIV+ V+
Sbjct 1 MSADSQAIQLAILAGLAAKSKKATEVIALDVSARLALTDIFILASGNNERQVRAIVEAVD 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPV 116
E M + G R ARREG +E RW LLDY +IVVH+QH+ DR FYAL+RLW D PVVP+
Sbjct 61 ETMSRHGVRLARREGFQECRWVLLDYGEIVVHVQHESDRQFYALERLWADAPVVPI 116
>gi|269976514|ref|ZP_06183499.1| iojap-like ribosome-associated protein [Mobiluncus mulieris 28-1]
gi|269935315|gb|EEZ91864.1| iojap-like ribosome-associated protein [Mobiluncus mulieris 28-1]
Length=159
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/116 (57%), Positives = 89/116 (77%), Gaps = 0/116 (0%)
Query 1 MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVE 60
M+A+ +AI +A +A AA +K A +V+ +DVS +L +TD F++ASG+NERQV AIV+ V+
Sbjct 1 MSADSQAIQLAILAGLAAKSKKATEVIALDVSARLALTDIFILASGNNERQVRAIVEAVD 60
Query 61 EKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPV 116
E M + G R ARREG +E RW LLDY +IVVH+QH+ DR FYAL+RLW D PVVP+
Sbjct 61 ETMSRHGVRLARREGFQECRWVLLDYGEIVVHVQHESDRQFYALERLWADAPVVPI 116
Lambda K H
0.320 0.134 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129836892488
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40