BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2430c

Length=194
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15841951|ref|NP_336988.1|  PPE family protein [Mycobacterium t...   401    2e-110
gi|31793610|ref|NP_856103.1|  PPE family protein [Mycobacterium b...   400    6e-110
gi|93279849|pdb|2G38|B  Chain B, A PePPE PROTEIN COMPLEX FROM MYC...   397    6e-109
gi|289762599|ref|ZP_06521977.1|  PPE family protein [Mycobacteriu...   317    6e-85 
gi|289570581|ref|ZP_06450808.1|  PPE family protein [Mycobacteriu...   286    1e-75 
gi|296167733|ref|ZP_06849950.1|  PPE family protein [Mycobacteriu...   120    1e-25 
gi|333990650|ref|YP_004523264.1|  PPE family protein [Mycobacteri...   114    7e-24 
gi|333991947|ref|YP_004524561.1|  PPE family protein [Mycobacteri...   114    8e-24 
gi|240168615|ref|ZP_04747274.1|  PPE family protein [Mycobacteriu...   111    4e-23 
gi|188523821|gb|ACD61709.1|  P27 [Mycobacterium bovis]                 110    1e-22 
gi|289750701|ref|ZP_06510079.1|  PPE family protein [Mycobacteriu...   108    3e-22 
gi|15841599|ref|NP_336636.1|  PPE family protein [Mycobacterium t...   108    3e-22 
gi|333989641|ref|YP_004522255.1|  PPE family protein PPE31_1 [Myc...   107    7e-22 
gi|340627118|ref|YP_004745570.1|  PPE family protein [Mycobacteri...   105    4e-21 
gi|183980708|ref|YP_001848999.1|  PPE family protein [Mycobacteri...   104    7e-21 
gi|118617327|ref|YP_905659.1|  PPE family protein [Mycobacterium ...   103    1e-20 
gi|298527010|ref|ZP_07014419.1|  ppe family protein [Mycobacteriu...   102    3e-20 
gi|342861296|ref|ZP_08717944.1|  PPE family protein [Mycobacteriu...   102    3e-20 
gi|289755661|ref|ZP_06515039.1|  PPE family protein [Mycobacteriu...   102    3e-20 
gi|333992835|ref|YP_004525449.1|  PPE family protein PPE51_2 [Myc...   102    3e-20 
gi|308231818|ref|ZP_07413879.2|  PPE family protein [Mycobacteriu...   102    3e-20 
gi|339294738|gb|AEJ46849.1|  PPE family protein [Mycobacterium tu...   102    3e-20 
gi|15841271|ref|NP_336308.1|  PPE family protein [Mycobacterium t...   102    4e-20 
gi|289750372|ref|ZP_06509750.1|  PPE family protein [Mycobacteriu...   102    4e-20 
gi|339631855|ref|YP_004723497.1|  PPE family protein [Mycobacteri...   102    4e-20 
gi|289574478|ref|ZP_06454705.1|  PPE family protein [Mycobacteriu...   102    4e-20 
gi|289757904|ref|ZP_06517282.1|  PPE family protein [Mycobacteriu...   101    4e-20 
gi|254550809|ref|ZP_05141256.1|  PPE family protein [Mycobacteriu...   101    5e-20 
gi|289745767|ref|ZP_06505145.1|  PPE family protein [Mycobacteriu...   101    5e-20 
gi|118617664|ref|YP_905996.1|  PPE family protein [Mycobacterium ...   101    5e-20 
gi|296165978|ref|ZP_06848434.1|  PPE family protein [Mycobacteriu...   101    6e-20 
gi|340626811|ref|YP_004745263.1|  PPE family protein [Mycobacteri...   100    8e-20 
gi|212596489|gb|ACJ35582.1|  PPE11 [Mycobacterium intracellulare ...   100    9e-20 
gi|289761951|ref|ZP_06521329.1|  PPE family protein [Mycobacteriu...   100    9e-20 
gi|289745858|ref|ZP_06505236.1|  PPE family protein [Mycobacteriu...   100    1e-19 
gi|307079711|ref|ZP_07488881.1|  PPE family protein [Mycobacteriu...   100    1e-19 
gi|121637612|ref|YP_977835.1|  PPE family protein [Mycobacterium ...   100    1e-19 
gi|240172861|ref|ZP_04751520.1|  PPE family protein, PPE31 [Mycob...   100    1e-19 
gi|183981860|ref|YP_001850151.1|  PPE family protein [Mycobacteri...   100    1e-19 
gi|340626711|ref|YP_004745163.1|  PPE family protein [Mycobacteri...   100    1e-19 
gi|254550715|ref|ZP_05141162.1|  PPE family protein [Mycobacteriu...   100    1e-19 
gi|31792891|ref|NP_855384.1|  PPE family protein [Mycobacterium b...   100    1e-19 
gi|57116898|ref|YP_177827.1|  PPE family protein [Mycobacterium t...   100    1e-19 
gi|289574372|ref|ZP_06454599.1|  PPE family protein [Mycobacteriu...   100    1e-19 
gi|15841163|ref|NP_336200.1|  PPE family protein [Mycobacterium t...   100    1e-19 
gi|167969175|ref|ZP_02551452.1|  PPE family protein [Mycobacteriu...   100    2e-19 
gi|289757814|ref|ZP_06517192.1|  predicted protein [Mycobacterium...  98.6    4e-19 
gi|254823261|ref|ZP_05228262.1|  hypothetical protein MintA_25249...  97.4    9e-19 
gi|183981477|ref|YP_001849768.1|  PPE family protein [Mycobacteri...  97.4    9e-19 
gi|212596561|gb|ACJ35588.1|  PPE19 [Mycobacterium intracellulare ...  97.4    9e-19 


>gi|15841951|ref|NP_336988.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
 gi|308232127|ref|ZP_07664008.1| PPE family protein [Mycobacterium tuberculosis SUMu001]
 gi|308369714|ref|ZP_07666789.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
 24 more sequence titles
 Length=223

 Score =  401 bits (1031),  Expect = 2e-110, Method: Compositional matrix adjust.
 Identities = 194/194 (100%), Positives = 194/194 (100%), Gaps = 0/194 (0%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPV  60
            MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPV
Sbjct  30   MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPV  89

Query  61   VMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILI  120
            VMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILI
Sbjct  90   VMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILI  149

Query  121  DNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPPIAHSTVLV  180
            DNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPPIAHSTVLV
Sbjct  150  DNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPPIAHSTVLV  209

Query  181  APVSPSTASSRTDT  194
            APVSPSTASSRTDT
Sbjct  210  APVSPSTASSRTDT  223


>gi|31793610|ref|NP_856103.1| PPE family protein [Mycobacterium bovis AF2122/97]
 gi|57116988|ref|YP_177881.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
 gi|121638312|ref|YP_978536.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
 49 more sequence titles
 Length=194

 Score =  400 bits (1028),  Expect = 6e-110, Method: Compositional matrix adjust.
 Identities = 194/194 (100%), Positives = 194/194 (100%), Gaps = 0/194 (0%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPV  60
            MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPV
Sbjct  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPV  60

Query  61   VMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILI  120
            VMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILI
Sbjct  61   VMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILI  120

Query  121  DNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPPIAHSTVLV  180
            DNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPPIAHSTVLV
Sbjct  121  DNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPPIAHSTVLV  180

Query  181  APVSPSTASSRTDT  194
            APVSPSTASSRTDT
Sbjct  181  APVSPSTASSRTDT  194


>gi|93279849|pdb|2G38|B Chain B, A PePPE PROTEIN COMPLEX FROM MYCOBACTERIUM TUBERCULOSIS
 gi|93279851|pdb|2G38|D Chain D, A PePPE PROTEIN COMPLEX FROM MYCOBACTERIUM TUBERCULOSIS
Length=198

 Score =  397 bits (1019),  Expect = 6e-109, Method: Compositional matrix adjust.
 Identities = 193/194 (99%), Positives = 193/194 (99%), Gaps = 0/194 (0%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPV  60
            M FEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPV
Sbjct  1    MAFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPV  60

Query  61   VMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILI  120
            VMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILI
Sbjct  61   VMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILI  120

Query  121  DNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPPIAHSTVLV  180
            DNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPPIAHSTVLV
Sbjct  121  DNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPPIAHSTVLV  180

Query  181  APVSPSTASSRTDT  194
            APVSPSTASSRTDT
Sbjct  181  APVSPSTASSRTDT  194


>gi|289762599|ref|ZP_06521977.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
 gi|289710105|gb|EFD74121.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
Length=154

 Score =  317 bits (812),  Expect = 6e-85, Method: Compositional matrix adjust.
 Identities = 153/154 (99%), Positives = 154/154 (100%), Gaps = 0/154 (0%)

Query  41   VQRSFNRTLLSLMDAWAGPVVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAH  100
            +QRSFNRTLLSLMDAWAGPVVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAH
Sbjct  1    MQRSFNRTLLSLMDAWAGPVVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAH  60

Query  101  HDMVPLAQIYNNRAERQILIDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDA  160
            HDMVPLAQIYNNRAERQILIDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDA
Sbjct  61   HDMVPLAQIYNNRAERQILIDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDA  120

Query  161  LSKLTPWKAPPPIAHSTVLVAPVSPSTASSRTDT  194
            LSKLTPWKAPPPIAHSTVLVAPVSPSTASSRTDT
Sbjct  121  LSKLTPWKAPPPIAHSTVLVAPVSPSTASSRTDT  154


>gi|289570581|ref|ZP_06450808.1| PPE family protein [Mycobacterium tuberculosis T17]
 gi|289544335|gb|EFD47983.1| PPE family protein [Mycobacterium tuberculosis T17]
Length=146

 Score =  286 bits (732),  Expect = 1e-75, Method: Compositional matrix adjust.
 Identities = 137/137 (100%), Positives = 137/137 (100%), Gaps = 0/137 (0%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPV  60
            MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPV
Sbjct  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPV  60

Query  61   VMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILI  120
            VMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILI
Sbjct  61   VMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILI  120

Query  121  DNNALGQFTAQIADLDQ  137
            DNNALGQFTAQIADLDQ
Sbjct  121  DNNALGQFTAQIADLDQ  137


>gi|296167733|ref|ZP_06849950.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295897076|gb|EFG76691.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=406

 Score =  120 bits (300),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 61/176 (35%), Positives = 92/176 (53%), Gaps = 2/176 (1%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLM-DAWAGP  59
            + F A PPE NSA +Y GPGP+++ AAA AW  L  E+ +    +++ + +L  + W GP
Sbjct  2    IDFGAAPPEYNSARMYTGPGPEALTAAASAWNGLAAELNSTALGYDKVITALSGEEWLGP  61

Query  60   VVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQIL  119
                + +A  P+V W+     Q  +   Q+H    AYE A    VP   +  NRA+   L
Sbjct  62   ASASMAQAVAPYVAWMRTTAAQAEQTANQMHAAATAYETALAATVPPPLVAANRAQTAQL  121

Query  120  IDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPPIAH  175
            +  N LG  T  IA L+ +Y + W +D   M  Y  + S A +K+ P+ A P IA+
Sbjct  122  LATNVLGLNTPAIAQLEAQYGEMWAQDASTMYSYAGQ-SAAATKVAPFTAAPQIAN  176


>gi|333990650|ref|YP_004523264.1| PPE family protein [Mycobacterium sp. JDM601]
 gi|333486619|gb|AEF36011.1| PPE family protein [Mycobacterium sp. JDM601]
Length=386

 Score =  114 bits (285),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 65/172 (38%), Positives = 91/172 (53%), Gaps = 2/172 (1%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLM-DAWAGP  59
            M F A PPE+NSA IYAG GP S+LAAA AW+ L  E+ +   S+   +  L   +WAGP
Sbjct  1    MDFGALPPEINSARIYAGAGPGSLLAAATAWQELATELNSAAASYGSVIAGLTTGSWAGP  60

Query  60   VVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQIL  119
              + +  AA P++ WL     Q  +   Q+   V AYE A    VP   I  NR+ +  L
Sbjct  61   SSVAMAAAAGPYITWLNATGAQAQQAAAQVSAAVAAYETAFAATVPPPLITANRSLQATL  120

Query  120  IDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPP  171
               N LGQ TA IA  + +Y + W +D   M  Y    S   ++++P+ +PP
Sbjct  121  TATNILGQNTAAIATTEADYLEMWAQDTAAMYGYA-GASALATRVSPFTSPP  171


>gi|333991947|ref|YP_004524561.1| PPE family protein [Mycobacterium sp. JDM601]
 gi|333487915|gb|AEF37307.1| PPE family protein [Mycobacterium sp. JDM601]
Length=463

 Score =  114 bits (285),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 67/177 (38%), Positives = 86/177 (49%), Gaps = 2/177 (1%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMD-AWAGP  59
            M F   PPE+ SA +YAGPGP  + A A AW  L  E+ A   S+   +  L    W G 
Sbjct  1    MDFGLVPPEIQSALMYAGPGPGPISATAAAWDGLAAELDAASASYASLVTDLTSTGWLGS  60

Query  60   VVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQIL  119
                +  A  P++ W+    VQ +E   Q+   V AYE A    VP   I  NRAE   L
Sbjct  61   TAALMAAAVSPYLAWMHTTAVQCAETAAQVRAGVAAYEEAFAATVPPPVIATNRAELLTL  120

Query  120  IDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPPIAHS  176
            +  N  GQ TA IA    EY + W +D   M  Y    S A ++LTP+ APP  A+S
Sbjct  121  LATNIFGQNTAAIAANQAEYAEMWAQDAAAMFGYASAASTA-TQLTPFTAPPKTANS  176


>gi|240168615|ref|ZP_04747274.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=379

 Score =  111 bits (278),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 66/172 (39%), Positives = 94/172 (55%), Gaps = 4/172 (2%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDA--WAG  58
            M +   PPE+NSA IY+GPGP S+LAAAR W ++  E+T+    + R+++S + A  W G
Sbjct  1    MDYAFLPPEINSARIYSGPGPGSLLAAARGWDAVATELTSAAVGY-RSVISSLTAMYWWG  59

Query  59   PVVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQI  118
            P  + ++  A PFV WL     Q  E   Q      A+E AH   VP A +  NR + + 
Sbjct  60   PASVSMLATAGPFVEWLETTAAQAKESADQSRAAAAAFEQAHAMTVPPAVVAANRTQLKA  119

Query  119  LIDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAP  170
            LI +N  GQ TA IA  + +Y + W +D   M  Y    S A + LTP+ +P
Sbjct  120  LIASNFFGQNTAAIAATEAQYAEMWAQDAAAMYGYASN-SAAATALTPFSSP  170


>gi|188523821|gb|ACD61709.1| P27 [Mycobacterium bovis]
Length=243

 Score =  110 bits (274),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 58/173 (34%), Positives = 93/173 (54%), Gaps = 0/173 (0%)

Query  2    HFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPVV  61
            +F A PPE+NS  IY GPG   +LAAA+ W +L  E+   +      L +L++++ G   
Sbjct  3    NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQSS  62

Query  62   MQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILID  121
              L++   P+V+WLT       ++  Q+     AYE A   MVP A +  NR +  +L  
Sbjct  63   QALIQQTLPYVQWLTTTAEHAHKIAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLKA  122

Query  122  NNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPPIA  174
             N  GQF+ +IAD + +Y+  W +D  VM +Y   V +A+   + ++ PP +A
Sbjct  123  INWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMA  175


>gi|289750701|ref|ZP_06510079.1| PPE family protein [Mycobacterium tuberculosis T92]
 gi|289691288|gb|EFD58717.1| PPE family protein [Mycobacterium tuberculosis T92]
Length=243

 Score =  108 bits (271),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 58/173 (34%), Positives = 92/173 (54%), Gaps = 0/173 (0%)

Query  2    HFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPVV  61
            +F A PPE+NS  IY GPG   +LAAA+ W +L  E+   +      L +L++++ G   
Sbjct  3    NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQSS  62

Query  62   MQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILID  121
              L++   P+V+WLT       +   Q+     AYE A   MVP A +  NR +  +L  
Sbjct  63   QALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLKA  122

Query  122  NNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPPIA  174
             N  GQF+ +IAD + +Y+  W +D  VM +Y   V +A+   + ++ PP +A
Sbjct  123  INWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMA  175


>gi|15841599|ref|NP_336636.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
 gi|31793288|ref|NP_855781.1| PPE family protein [Mycobacterium bovis AF2122/97]
 gi|57116946|ref|YP_177859.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
 74 more sequence titles
 Length=243

 Score =  108 bits (271),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 58/173 (34%), Positives = 92/173 (54%), Gaps = 0/173 (0%)

Query  2    HFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPVV  61
            +F A PPE+NS  IY GPG   +LAAA+ W +L  E+   +      L +L++++ G   
Sbjct  3    NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQSS  62

Query  62   MQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILID  121
              L++   P+V+WLT       +   Q+     AYE A   MVP A +  NR +  +L  
Sbjct  63   QALIQQTLPYVQWLTTTAEHAHKTAIQLTAAANAYEQARAAMVPPAMVRANRVQTTVLKA  122

Query  122  NNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPPIA  174
             N  GQF+ +IAD + +Y+  W +D  VM +Y   V +A+   + ++ PP +A
Sbjct  123  INWFGQFSTRIADKEADYEQMWFQDALVMENYWEAVQEAIQSTSHFEDPPEMA  175


>gi|333989641|ref|YP_004522255.1| PPE family protein PPE31_1 [Mycobacterium sp. JDM601]
 gi|333485609|gb|AEF35001.1| PPE family protein PPE31_1 [Mycobacterium sp. JDM601]
Length=424

 Score =  107 bits (268),  Expect = 7e-22, Method: Compositional matrix adjust.
 Identities = 62/171 (37%), Positives = 93/171 (55%), Gaps = 2/171 (1%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMD-AWAGP  59
            + +   PPEVNSA +YAGPG   M+A A AWR L  E+++   S+  TL  L+D AW GP
Sbjct  2    IDYATLPPEVNSARLYAGPGSTPMMAVASAWRGLAAEISSALTSYETTLTQLVDEAWMGP  61

Query  60   VVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQIL  119
              + +  A KP++ WLTD   +  +   +      A+E AH    P A I  NRA+++ L
Sbjct  62   ASVSMTAATKPYLAWLTDTLAKAEDTASRATAAAAAFEAAHGATPPPAVIAANRAQQKQL  121

Query  120  IDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAP  170
            +  N +GQ +A I   D +Y + W +   VM  Y    + A +++TP+  P
Sbjct  122  VATNVVGQNSAAIMASDAQYLEMWAQAANVMYSYAASSATA-TQVTPFSEP  171


>gi|340627118|ref|YP_004745570.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
 gi|340005308|emb|CCC44464.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
Length=243

 Score =  105 bits (261),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 57/173 (33%), Positives = 89/173 (52%), Gaps = 0/173 (0%)

Query  2    HFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPVV  61
            +F A PPE+NS  IY GPG   +LAAA+ W +L  E+   +      L +L++++ G   
Sbjct  3    NFWALPPEINSTRIYLGPGSGPILAAAQGWNALASELEKTKVGLQSALDTLLESYRGQSS  62

Query  62   MQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILID  121
              L++   P+V+WLT           Q+     AYE A   MVP A +  NR +   L  
Sbjct  63   QALIQQTLPYVQWLTTTAEHAHRTATQLTAAANAYEQARAAMVPPAMVRANRVQTIALKA  122

Query  122  NNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPPIA  174
             N  GQF+ +IA+ + +Y+  W +D  VM  Y   V +A+   + ++ PP +A
Sbjct  123  FNWFGQFSTRIAEKEADYEQMWFQDALVMETYWEAVQEAIQSTSQFEDPPKMA  175


>gi|183980708|ref|YP_001848999.1| PPE family protein [Mycobacterium marinum M]
 gi|183174034|gb|ACC39144.1| PPE family protein [Mycobacterium marinum M]
Length=444

 Score =  104 bits (260),  Expect = 7e-21, Method: Compositional matrix adjust.
 Identities = 64/172 (38%), Positives = 88/172 (52%), Gaps = 2/172 (1%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDA-WAGP  59
            M F A PPE+NSA +YAGPG   ++ AARAW  L  E+ A   S++  +  L  A W GP
Sbjct  1    MDFGALPPEINSARMYAGPGSAPLVQAARAWGRLANELNATAASYSSVIAGLGAADWQGP  60

Query  60   VVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQIL  119
              + +  AA P+V W+     Q  +   Q      AYE AH  +VP  QI  NR+    L
Sbjct  61   SALSMAAAAAPYVAWMRSTAAQAEQAAAQAISAANAYESAHAAIVPPGQIAANRSTMLSL  120

Query  120  IDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPP  171
            + +N  GQ T  IA  + +Y + W +D   M  Y    S A + L P+ +PP
Sbjct  121  VRSNIFGQNTPAIATSEADYSEMWAQDIVAMDGYA-GTSAAATDLAPFTSPP  171


>gi|118617327|ref|YP_905659.1| PPE family protein [Mycobacterium ulcerans Agy99]
 gi|118569437|gb|ABL04188.1| PPE family protein [Mycobacterium ulcerans Agy99]
Length=392

 Score =  103 bits (257),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 62/176 (36%), Positives = 92/176 (53%), Gaps = 2/176 (1%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLM-DAWAGP  59
            M F A PPEVNS  +Y GPG   M++AA AW  L  E++     + R + +L  + W GP
Sbjct  1    MDFGALPPEVNSGRMYTGPGSTPMVSAASAWNRLASELSFTADGYERVIKALSGEEWFGP  60

Query  60   VVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQIL  119
                ++EA  P+V W+    VQ     +Q    V A+E A   +VP   I +NR +   L
Sbjct  61   ASAMMLEAITPYVTWMRSTAVQAERAAKQAEAAVAAFEAAFTGVVPPPLIASNRMQLMTL  120

Query  120  IDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPPIAH  175
            +  N  GQ+TA+IA L+ +Y + W +D   M  Y    + A +K+T +  PP  A+
Sbjct  121  MARNIYGQYTAEIASLEAQYAEMWAQDARAMYTYAGSSASA-TKITAFTPPPETAN  175


>gi|298527010|ref|ZP_07014419.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|298496804|gb|EFI32098.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A]
Length=405

 Score =  102 bits (254),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 63/171 (37%), Positives = 86/171 (51%), Gaps = 3/171 (1%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMD-AWAGP  59
            M F   PPEVNS  +Y+GPG  S+ AAA AW  +  E+ +   ++   + SL    W GP
Sbjct  3    MDFAMLPPEVNSTRMYSGPGAGSLWAAA-AWDQVSAELQSAAETYRSVIASLTGWQWLGP  61

Query  60   VVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQIL  119
              +++  A  P+V WLT    Q  +   QI      +E A    VP   I  NRA+   L
Sbjct  62   SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL  121

Query  120  IDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAP  170
            I  N  GQ TA IA L+ +Y + W++D   M DY    S A   LTP+ +P
Sbjct  122  IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYA-ATSAAARTLTPFTSP  171


>gi|342861296|ref|ZP_08717944.1| PPE family protein [Mycobacterium colombiense CECT 3035]
 gi|342131196|gb|EGT84477.1| PPE family protein [Mycobacterium colombiense CECT 3035]
Length=395

 Score =  102 bits (254),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 64/171 (38%), Positives = 87/171 (51%), Gaps = 2/171 (1%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLM-DAWAGP  59
            + F A PPE+NSA +Y+GPG   MLAAA AW ++  EM A   S+   +  L  + W GP
Sbjct  2    LDFAALPPEINSARMYSGPGSGPMLAAAAAWNTMAAEMRAAAASYGSVVTELSSEGWLGP  61

Query  60   VVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQIL  119
              M ++ AA P++ WL     Q  EV  Q      AYE A    VP A +  NRA+  +L
Sbjct  62   SSMSMLAAAAPYLAWLDGTATQAEEVGSQAFAAATAYESAFAMTVPPAVVAANRAQLAML  121

Query  120  IDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAP  170
            +  N  GQ T  IA  + +Y + W +D   M  Y    S A ++ TP   P
Sbjct  122  VATNIFGQNTPAIAATEAQYAEMWAQDAGAMNGYA-TASSAAAQFTPLATP  171


>gi|289755661|ref|ZP_06515039.1| PPE family protein [Mycobacterium tuberculosis EAS054]
 gi|289696248|gb|EFD63677.1| PPE family protein [Mycobacterium tuberculosis EAS054]
Length=405

 Score =  102 bits (254),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 63/171 (37%), Positives = 86/171 (51%), Gaps = 3/171 (1%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMD-AWAGP  59
            M F   PPEVNS  +Y+GPG  S+ AAA AW  +  E+ +   ++   + SL    W GP
Sbjct  3    MDFAMLPPEVNSTRMYSGPGAGSLWAAA-AWDQVSAELQSAAETYRSVIASLTGWQWLGP  61

Query  60   VVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQIL  119
              +++  A  P+V WLT    Q  +   QI      +E A    VP   I  NRA+   L
Sbjct  62   SSVRMGAAVTPYVEWLTTTAAQARQTATQITAAATGFEQAFAMTVPPPAIMANRAQVLSL  121

Query  120  IDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAP  170
            I  N  GQ TA IA L+ +Y + W++D   M DY    S A   LTP+ +P
Sbjct  122  IATNFFGQNTAAIAALETQYAEMWEQDATAMYDYA-ATSAAARTLTPFTSP  171


>gi|333992835|ref|YP_004525449.1| PPE family protein PPE51_2 [Mycobacterium sp. JDM601]
 gi|333488803|gb|AEF38195.1| PPE family protein PPE51_2 [Mycobacterium sp. JDM601]
Length=428

 Score =  102 bits (254),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 66/171 (39%), Positives = 93/171 (55%), Gaps = 1/171 (0%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPV  60
            + F A PPEV S+ +YAGPG +S+L AA AW+ L  E+ AV  S+   L +L   W GP 
Sbjct  2    IDFAAIPPEVTSSLLYAGPGAESLLTAATAWQGLATELQAVTASYRAVLATLTVDWIGPS  61

Query  61   VMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILI  120
               ++ AA PFV W++    Q ++   Q      A+E A   +VP   I  NR+ R+ L+
Sbjct  62   SAAMVAAATPFVDWVSGAAAQATQASAQAGAAASAFEVALAAVVPPPVIAANRSLREALL  121

Query  121  DNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPP  171
              N LGQ TA IA  D +Y   W +D   M  Y    + A ++LTP+ +PP
Sbjct  122  ATNTLGQNTAAIAAADAQYAQMWAQDAAAMVQYEAAAASA-TRLTPFASPP  171


>gi|308231818|ref|ZP_07413879.2| PPE family protein [Mycobacterium tuberculosis SUMu001]
 gi|308215968|gb|EFO75367.1| PPE family protein [Mycobacterium tuberculosis SUMu001]
Length=395

 Score =  102 bits (253),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 64/181 (36%), Positives = 91/181 (51%), Gaps = 1/181 (0%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLM-DAWAGP  59
            M F A PPE+NSA +YAGPG  S++AAA+ W S+  ++ +   +F   +  L   +W G 
Sbjct  1    MDFGALPPEINSARMYAGPGSASLVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIGS  60

Query  60   VVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQIL  119
                ++ AA P+V W++    Q      Q+     AYE A+   VP   I  NRAE  IL
Sbjct  61   SAGLMVAAASPYVAWMSVTAGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMIL  120

Query  120  IDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPPIAHSTVL  179
            I  N LGQ T  IA  + EY + W +D   M  Y    + A   L P++  P I +   L
Sbjct  121  IATNLLGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAPLITNPGGL  180

Query  180  V  180
            +
Sbjct  181  L  181


>gi|339294738|gb|AEJ46849.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length=423

 Score =  102 bits (253),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 63/171 (37%), Positives = 84/171 (50%), Gaps = 1/171 (0%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPV  60
            M F   PPE+NS  +Y GPGP  MLAAA AW  L VE+ A    +   L +L  AW+GP 
Sbjct  1    MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS  60

Query  61   VMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILI  120
               +  AA P+V W++   V       Q    + AYE A    VP   I  NRA+  +LI
Sbjct  61   STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI  120

Query  121  DNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPP  171
              N  GQ T  I   + +Y + W +D   M  Y    + A S++T +  PP
Sbjct  121  ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATA-SRMTAFTEPP  170


>gi|15841271|ref|NP_336308.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
 gi|31792989|ref|NP_855482.1| PPE family protein [Mycobacterium bovis AF2122/97]
 gi|57116916|ref|YP_177840.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
 57 more sequence titles
 Length=423

 Score =  102 bits (253),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 63/171 (37%), Positives = 84/171 (50%), Gaps = 1/171 (0%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPV  60
            M F   PPE+NS  +Y GPGP  MLAAA AW  L VE+ A    +   L +L  AW+GP 
Sbjct  1    MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS  60

Query  61   VMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILI  120
               +  AA P+V W++   V       Q    + AYE A    VP   I  NRA+  +LI
Sbjct  61   STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI  120

Query  121  DNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPP  171
              N  GQ T  I   + +Y + W +D   M  Y    + A S++T +  PP
Sbjct  121  ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATA-SRMTAFTEPP  170


>gi|289750372|ref|ZP_06509750.1| PPE family protein [Mycobacterium tuberculosis T92]
 gi|289690959|gb|EFD58388.1| PPE family protein [Mycobacterium tuberculosis T92]
Length=333

 Score =  102 bits (253),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 63/171 (37%), Positives = 84/171 (50%), Gaps = 1/171 (0%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPV  60
            M F   PPE+NS  +Y GPGP  MLAAA AW  L VE+ A    +   L +L  AW+GP 
Sbjct  1    MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS  60

Query  61   VMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILI  120
               +  AA P+V W++   V       Q    + AYE A    VP   I  NRA+  +LI
Sbjct  61   STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI  120

Query  121  DNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPP  171
              N  GQ T  I   + +Y + W +D   M  Y    + A S++T +  PP
Sbjct  121  ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATA-SRMTAFTEPP  170


>gi|339631855|ref|YP_004723497.1| PPE family protein [Mycobacterium africanum GM041182]
 gi|339331211|emb|CCC26893.1| PPE family protein [Mycobacterium africanum GM041182]
Length=423

 Score =  102 bits (253),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 63/171 (37%), Positives = 84/171 (50%), Gaps = 1/171 (0%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPV  60
            M F   PPE+NS  +Y GPGP  MLAAA AW  L VE+ A    +   L +L  AW+GP 
Sbjct  1    MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS  60

Query  61   VMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILI  120
               +  AA P+V W++   V       Q    + AYE A    VP   I  NRA+  +LI
Sbjct  61   STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI  120

Query  121  DNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPP  171
              N  GQ T  I   + +Y + W +D   M  Y    + A S++T +  PP
Sbjct  121  ATNIFGQNTPAIMMTEAQYMEMWAQDSAAMYGYAGSSATA-SRMTAFTEPP  170


>gi|289574478|ref|ZP_06454705.1| PPE family protein [Mycobacterium tuberculosis K85]
 gi|289538909|gb|EFD43487.1| PPE family protein [Mycobacterium tuberculosis K85]
Length=423

 Score =  102 bits (253),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 63/171 (37%), Positives = 84/171 (50%), Gaps = 1/171 (0%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPV  60
            M F   PPE+NS  +Y GPGP  MLAAA AW  L VE+ A    +   L +L  AW+GP 
Sbjct  1    MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS  60

Query  61   VMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILI  120
               +  AA P+V W++   V       Q    + AYE A    VP   I  NRA+  +LI
Sbjct  61   STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI  120

Query  121  DNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPP  171
              N  GQ T  I   + +Y + W +D   M  Y    + A S++T +  PP
Sbjct  121  ATNIFGQNTPAIMMTEAQYMEMWAQDSAAMYGYAGSSATA-SRMTAFTEPP  170


>gi|289757904|ref|ZP_06517282.1| PPE family protein [Mycobacterium tuberculosis T85]
 gi|289713468|gb|EFD77480.1| PPE family protein [Mycobacterium tuberculosis T85]
Length=305

 Score =  101 bits (252),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 63/171 (37%), Positives = 84/171 (50%), Gaps = 1/171 (0%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPV  60
            M F   PPE+NS  +Y GPGP  MLAAA AW  L VE+ A    +   L +L  AW+GP 
Sbjct  1    MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS  60

Query  61   VMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILI  120
               +  AA P+V W++   V       Q    + AYE A    VP   I  NRA+  +LI
Sbjct  61   STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI  120

Query  121  DNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPP  171
              N  GQ T  I   + +Y + W +D   M  Y    + A S++T +  PP
Sbjct  121  ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATA-SRMTAFTEPP  170


>gi|254550809|ref|ZP_05141256.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=284

 Score =  101 bits (252),  Expect = 5e-20, Method: Compositional matrix adjust.
 Identities = 63/171 (37%), Positives = 84/171 (50%), Gaps = 1/171 (0%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPV  60
            M F   PPE+NS  +Y GPGP  MLAAA AW  L VE+ A    +   L +L  AW+GP 
Sbjct  1    MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS  60

Query  61   VMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILI  120
               +  AA P+V W++   V       Q    + AYE A    VP   I  NRA+  +LI
Sbjct  61   STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI  120

Query  121  DNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPP  171
              N  GQ T  I   + +Y + W +D   M  Y    + A S++T +  PP
Sbjct  121  ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATA-SRMTAFTEPP  170


>gi|289745767|ref|ZP_06505145.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
 gi|289686295|gb|EFD53783.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
Length=418

 Score =  101 bits (252),  Expect = 5e-20, Method: Compositional matrix adjust.
 Identities = 63/171 (37%), Positives = 84/171 (50%), Gaps = 1/171 (0%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPV  60
            M F   PPE+NS  +Y GPGP  MLAAA AW  L VE+ A    +   L +L  AW+GP 
Sbjct  1    MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS  60

Query  61   VMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILI  120
               +  AA P+V W++   V       Q    + AYE A    VP   I  NRA+  +LI
Sbjct  61   STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI  120

Query  121  DNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPP  171
              N  GQ T  I   + +Y + W +D   M  Y    + A S++T +  PP
Sbjct  121  ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATA-SRMTAFTEPP  170


>gi|118617664|ref|YP_905996.1| PPE family protein [Mycobacterium ulcerans Agy99]
 gi|118569774|gb|ABL04525.1| PPE family protein [Mycobacterium ulcerans Agy99]
Length=388

 Score =  101 bits (252),  Expect = 5e-20, Method: Compositional matrix adjust.
 Identities = 62/173 (36%), Positives = 84/173 (49%), Gaps = 1/173 (0%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPV  60
            M + A PPE+NSA +YAGPG  SM  AA AW +L  E+ +    ++     L   W GP 
Sbjct  1    MDYAALPPEINSARMYAGPGSTSMQTAATAWDALATELYSAASCYSSITAGLAGKWQGPA  60

Query  61   VMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILI  120
               + +AA P+  WL+    Q      Q    V A+  A    VP   I  NRA    LI
Sbjct  61   ATAMAQAAAPYAAWLSTTAAQAELASAQARAAVSAHAGAFAATVPPPVIAANRAHLAALI  120

Query  121  DNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPPI  173
              N LGQ +  IA  +  Y+  W +D   M  Y    + A ++LTP+ +PPPI
Sbjct  121  ATNLLGQNSPAIATTEANYEQMWAQDAAAMYGYAGACASA-TRLTPFTSPPPI  172


>gi|296165978|ref|ZP_06848434.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295898668|gb|EFG78218.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=202

 Score =  101 bits (251),  Expect = 6e-20, Method: Compositional matrix adjust.
 Identities = 70/189 (38%), Positives = 96/189 (51%), Gaps = 5/189 (2%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLM-DAWAGP  59
            + F A PPEVNSA IYAGPG  S++ AA +W +L  E+ +   S+ + + +L  + W GP
Sbjct  5    LDFGALPPEVNSARIYAGPGSGSLMTAASSWNALAAELNSAALSYEKLITALSSEEWMGP  64

Query  60   VVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQIL  119
                +  A +P+V W+     Q  E   Q      AYE A    VP   +  NRAE Q L
Sbjct  65   ASAAMAAAVQPYVTWMQTTAAQAEEAAAQAQAAAAAYETALAASVPPPLVAANRAETQQL  124

Query  120  IDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPPIAHSTVL  179
            I  N LGQ T  I  L+ +Y   W +D   M  Y  + S   +KLT + A P I++ T  
Sbjct  125  ISTNVLGQNTPAITQLEAQYGQMWAQDASAMYSYAGQ-SATSTKLTQFSAAPKISNDT--  181

Query  180  VAPVSPSTA  188
             AP + S A
Sbjct  182  -APATQSAA  189


>gi|340626811|ref|YP_004745263.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
 gi|340005001|emb|CCC44149.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
Length=423

 Score =  100 bits (250),  Expect = 8e-20, Method: Compositional matrix adjust.
 Identities = 64/171 (38%), Positives = 84/171 (50%), Gaps = 1/171 (0%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPV  60
            M F   PPE+NS  +Y GPGP  MLAAA AW  L VE+ A    +   L +L  AW+GP 
Sbjct  1    MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS  60

Query  61   VMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILI  120
               +  AA P+V W++   V       Q    V AYE A    VP   I  NRA+  +LI
Sbjct  61   STSMASAAAPYVAWMSATAVHAELAAAQARLAVAAYEAAFAATVPPPVIAANRAQLMVLI  120

Query  121  DNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPP  171
              N  GQ T  I   + +Y + W +D   M  Y    + A S++T +  PP
Sbjct  121  ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATA-SRMTAFTEPP  170


>gi|212596489|gb|ACJ35582.1| PPE11 [Mycobacterium intracellulare ATCC 13950]
Length=463

 Score =  100 bits (250),  Expect = 9e-20, Method: Compositional matrix adjust.
 Identities = 63/179 (36%), Positives = 86/179 (49%), Gaps = 1/179 (0%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMD-AWAGP  59
            M F A PPE+NS  +Y GPGP+S+LAAA  W +L  E+T    S+   + SL D +W+GP
Sbjct  1    MDFGALPPEINSGRMYLGPGPESLLAAAAGWETLAAELTDAAGSYQAVIASLTDESWSGP  60

Query  60   VVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQIL  119
              M +  A  P++ W+T    Q  +   Q      A+E A+   VP   +  NR     L
Sbjct  61   ASMSMAAAVMPYIAWMTATAEQCQQAAAQATAAAAAFETAYAMTVPPPLVAANRVRLLAL  120

Query  120  IDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPPIAHSTV  178
            I  N  GQ T  I   + EY + W +D   M  Y    + A +       PP  A STV
Sbjct  121  IQTNIFGQNTPAIMAAEAEYSEMWAKDATAMYGYAASSASASALSPVAAPPPQTATSTV  179


>gi|289761951|ref|ZP_06521329.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
 gi|289709457|gb|EFD73473.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
Length=423

 Score =  100 bits (250),  Expect = 9e-20, Method: Compositional matrix adjust.
 Identities = 63/171 (37%), Positives = 84/171 (50%), Gaps = 1/171 (0%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPV  60
            M F   PPE+NS  +Y GPGP  MLAAA AW  L VE+ A    +   L +L  AW+GP 
Sbjct  1    MDFGLLPPEINSGRMYTGPGPGPMLAAATAWDGLAVELHATAAGYASELSALTGAWSGPS  60

Query  61   VMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILI  120
               +  AA P+V W++   V       Q    + AYE A    VP   I  NRA+  +LI
Sbjct  61   STSMASAAAPYVAWMSATAVHAELAGAQARLAIAAYEAAFAATVPPPVIAANRAQLMVLI  120

Query  121  DNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPP  171
              N  GQ T  I   + +Y + W +D   M  Y    + A S++T +  PP
Sbjct  121  ATNIFGQNTPAIMMTEAQYMEMWAQDAAAMYGYAGSSATA-SRMTAFTEPP  170


>gi|289745858|ref|ZP_06505236.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
 gi|289686386|gb|EFD53874.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
Length=385

 Score =  100 bits (250),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 62/172 (37%), Positives = 87/172 (51%), Gaps = 2/172 (1%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSL-MDAWAGP  59
            M F A PPEVNS  +Y GPG   M+AAA AW  L  E++     + R + +L  + W GP
Sbjct  1    MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP  60

Query  60   VVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQIL  119
                ++EA  P+V W+    +Q  +   Q      AYE A   +VP   I  NRA    L
Sbjct  61   ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL  120

Query  120  IDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPP  171
            + +N  GQ TA IA  + +Y + W +D   M  Y    + A +K+TP+  PP
Sbjct  121  VTHNVFGQNTASIAATEAQYAEMWAQDAMAMHGYAGSSATA-TKVTPFAPPP  171


>gi|307079711|ref|ZP_07488881.1| PPE family protein [Mycobacterium tuberculosis SUMu011]
 gi|308362459|gb|EFP51310.1| PPE family protein [Mycobacterium tuberculosis SUMu011]
Length=376

 Score =  100 bits (249),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 64/173 (37%), Positives = 89/173 (52%), Gaps = 3/173 (1%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSL-MDAWAGP  59
            M F A PPEVNS  +Y GPG   M+AAA AW  L  E++     + R + +L  + W GP
Sbjct  1    MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP  60

Query  60   VVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQIL  119
                ++EA  P+V W+    +Q  +   Q      AYE A   +VP   I  NRA    L
Sbjct  61   ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL  120

Query  120  IDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPP  172
            + +N  GQ TA IA  + +Y + W +D   M  Y    + A +K+TP+ APPP
Sbjct  121  VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATA-TKVTPF-APPP  171


>gi|121637612|ref|YP_977835.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|121493259|emb|CAL71730.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
Length=385

 Score =  100 bits (249),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 62/172 (37%), Positives = 87/172 (51%), Gaps = 2/172 (1%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSL-MDAWAGP  59
            M F A PPEVNS  +Y GPG   M+AAA AW  L  E++     + R + +L  + W GP
Sbjct  1    MAFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP  60

Query  60   VVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQIL  119
                ++EA  P+V W+    +Q  +   Q      AYE A   +VP   I  NRA    L
Sbjct  61   ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL  120

Query  120  IDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPP  171
            + +N  GQ TA IA  + +Y + W +D   M  Y    + A +K+TP+  PP
Sbjct  121  VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATA-TKVTPFAPPP  171


>gi|240172861|ref|ZP_04751520.1| PPE family protein, PPE31 [Mycobacterium kansasii ATCC 12478]
Length=401

 Score =  100 bits (249),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 66/171 (39%), Positives = 88/171 (52%), Gaps = 2/171 (1%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLM-DAWAGP  59
            + F   PPE+NSA +Y+GPG   MLAAA AW+SL  E+ A   S++  L +L  + W GP
Sbjct  5    LDFAMLPPEINSARMYSGPGSGPMLAAASAWKSLAAELRATALSYHSVLAALTGEEWYGP  64

Query  60   VVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQIL  119
                +  AA P+V WL    VQ  +   Q      AYE A    VP   I  NRA+   L
Sbjct  65   ASASMAAAAAPYVAWLNTTAVQAEQTAVQAEAAAGAYEAAFGATVPPPVIAANRAQLMAL  124

Query  120  IDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAP  170
            I  N LGQ T  IA  + +Y + W +D   M  Y    S A ++L+P+  P
Sbjct  125  IATNILGQNTPAIAATEAQYTEMWAQDAMAMYGYA-GSSAAATQLSPFVEP  174


>gi|183981860|ref|YP_001850151.1| PPE family protein [Mycobacterium marinum M]
 gi|183175186|gb|ACC40296.1| PPE family protein [Mycobacterium marinum M]
Length=388

 Score =  100 bits (249),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 61/173 (36%), Positives = 84/173 (49%), Gaps = 1/173 (0%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPV  60
            M + A PPE+NSA +Y+GPG  SM  AA AW +L  E+ +    ++     L   W GP 
Sbjct  1    MDYAALPPEINSARMYSGPGSTSMQTAATAWDALATELYSAASCYSSITAGLAGKWQGPA  60

Query  61   VMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILI  120
               + +AA P+  WL+    Q      Q    V A+  A    VP   I  NRA    LI
Sbjct  61   ATAMAQAAAPYAAWLSTTAAQAELASAQARAAVSAHAGAFAATVPPPVIAANRAHLAALI  120

Query  121  DNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPPI  173
              N LGQ +  IA  +  Y+  W +D   M  Y    + A ++LTP+ +PPPI
Sbjct  121  ATNLLGQNSPAIATTEANYEQMWAQDAAAMYGYAGACASA-TRLTPFTSPPPI  172


>gi|340626711|ref|YP_004745163.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
 gi|340004901|emb|CCC44047.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
Length=385

 Score =  100 bits (248),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 64/173 (37%), Positives = 89/173 (52%), Gaps = 3/173 (1%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSL-MDAWAGP  59
            M F A PPEVNS  +Y GPG   M+AAA AW  L  E++     + R + +L  + W GP
Sbjct  1    MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP  60

Query  60   VVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQIL  119
                ++EA  P+V W+    +Q  +   Q      AYE A   +VP   I  NRA    L
Sbjct  61   ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL  120

Query  120  IDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPP  172
            + +N  GQ TA IA  + +Y + W +D   M  Y    + A +K+TP+ APPP
Sbjct  121  VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATA-TKVTPF-APPP  171


>gi|254550715|ref|ZP_05141162.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=385

 Score =  100 bits (248),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 62/172 (37%), Positives = 87/172 (51%), Gaps = 2/172 (1%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSL-MDAWAGP  59
            M F A PPEVNS  +Y GPG   M+AAA AW  L  E++     + R + +L  + W GP
Sbjct  1    MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP  60

Query  60   VVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQIL  119
                ++EA  P+V W+    +Q  +   Q      AYE A   +VP   I  NRA    L
Sbjct  61   ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL  120

Query  120  IDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPP  171
            + +N  GQ TA IA  + +Y + W +D   M  Y    + A +K+TP+  PP
Sbjct  121  VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATA-TKVTPFAPPP  171


>gi|31792891|ref|NP_855384.1| PPE family protein [Mycobacterium bovis AF2122/97]
 gi|224990087|ref|YP_002644774.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|289443162|ref|ZP_06432906.1| PPE family protein [Mycobacterium tuberculosis T46]
 18 more sequence titles
 Length=385

 Score =  100 bits (248),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 62/172 (37%), Positives = 87/172 (51%), Gaps = 2/172 (1%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSL-MDAWAGP  59
            M F A PPEVNS  +Y GPG   M+AAA AW  L  E++     + R + +L  + W GP
Sbjct  1    MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP  60

Query  60   VVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQIL  119
                ++EA  P+V W+    +Q  +   Q      AYE A   +VP   I  NRA    L
Sbjct  61   ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL  120

Query  120  IDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPP  171
            + +N  GQ TA IA  + +Y + W +D   M  Y    + A +K+TP+  PP
Sbjct  121  VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATA-TKVTPFAPPP  171


>gi|57116898|ref|YP_177827.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
 gi|148661502|ref|YP_001283025.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
 gi|148822911|ref|YP_001287665.1| PPE family protein [Mycobacterium tuberculosis F11]
 39 more sequence titles
 Length=385

 Score =  100 bits (248),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 62/172 (37%), Positives = 87/172 (51%), Gaps = 2/172 (1%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSL-MDAWAGP  59
            M F A PPEVNS  +Y GPG   M+AAA AW  L  E++     + R + +L  + W GP
Sbjct  1    MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP  60

Query  60   VVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQIL  119
                ++EA  P+V W+    +Q  +   Q      AYE A   +VP   I  NRA    L
Sbjct  61   ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL  120

Query  120  IDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPP  171
            + +N  GQ TA IA  + +Y + W +D   M  Y    + A +K+TP+  PP
Sbjct  121  VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATA-TKVTPFAPPP  171


>gi|289574372|ref|ZP_06454599.1| PPE family protein [Mycobacterium tuberculosis K85]
 gi|289538803|gb|EFD43381.1| PPE family protein [Mycobacterium tuberculosis K85]
Length=384

 Score =  100 bits (248),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 64/173 (37%), Positives = 89/173 (52%), Gaps = 3/173 (1%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSL-MDAWAGP  59
            M F A PPEVNS  +Y GPG   M+AAA AW  L  E++     + R + +L  + W GP
Sbjct  1    MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP  60

Query  60   VVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQIL  119
                ++EA  P+V W+    +Q  +   Q      AYE A   +VP   I  NRA    L
Sbjct  61   ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL  120

Query  120  IDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPP  172
            + +N  GQ TA IA  + +Y + W +D   M  Y    + A +K+TP+ APPP
Sbjct  121  VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATA-TKVTPF-APPP  171


>gi|15841163|ref|NP_336200.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
 gi|13881383|gb|AAK46014.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
 gi|323719795|gb|EGB28909.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
Length=385

 Score =  100 bits (248),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 62/172 (37%), Positives = 87/172 (51%), Gaps = 2/172 (1%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSL-MDAWAGP  59
            M F A PPEVNS  +Y GPG   M+AAA AW  L  E++     + R + +L  + W GP
Sbjct  1    MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP  60

Query  60   VVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQIL  119
                ++EA  P+V W+    +Q  +   Q      AYE A   +VP   I  NRA    L
Sbjct  61   ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL  120

Query  120  IDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPP  171
            + +N  GQ TA IA  + +Y + W +D   M  Y    + A +K+TP+  PP
Sbjct  121  VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATA-TKVTPFAPPP  171


>gi|167969175|ref|ZP_02551452.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length=356

 Score =  100 bits (248),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 64/173 (37%), Positives = 89/173 (52%), Gaps = 3/173 (1%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSL-MDAWAGP  59
            M F A PPEVNS  +Y GPG   M+AAA AW  L  E++     + R + +L  + W GP
Sbjct  1    MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP  60

Query  60   VVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQIL  119
                ++EA  P+V W+    +Q  +   Q      AYE A   +VP   I  NRA    L
Sbjct  61   ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL  120

Query  120  IDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPP  172
            + +N  GQ TA IA  + +Y + W +D   M  Y    + A +K+TP+ APPP
Sbjct  121  VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATA-TKVTPF-APPP  171


>gi|289757814|ref|ZP_06517192.1| predicted protein [Mycobacterium tuberculosis T85]
 gi|289713378|gb|EFD77390.1| predicted protein [Mycobacterium tuberculosis T85]
Length=298

 Score = 98.6 bits (244),  Expect = 4e-19, Method: Compositional matrix adjust.
 Identities = 62/172 (37%), Positives = 87/172 (51%), Gaps = 2/172 (1%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSL-MDAWAGP  59
            M F A PPEVNS  +Y GPG   M+AAA AW  L  E++     + R + +L  + W GP
Sbjct  1    MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP  60

Query  60   VVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQIL  119
                ++EA  P+V W+    +Q  +   Q      AYE A   +VP   I  NRA    L
Sbjct  61   ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL  120

Query  120  IDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPP  171
            + +N  GQ TA IA  + +Y + W +D   M  Y    + A +K+TP+  PP
Sbjct  121  VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATA-TKVTPFAPPP  171


>gi|254823261|ref|ZP_05228262.1| hypothetical protein MintA_25249 [Mycobacterium intracellulare 
ATCC 13950]
Length=467

 Score = 97.4 bits (241),  Expect = 9e-19, Method: Compositional matrix adjust.
 Identities = 64/172 (38%), Positives = 90/172 (53%), Gaps = 1/172 (0%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDA-WAGP  59
            M + A+PPE NS  +Y+GPG  S++AAA AW+SL  E+ +   S+  T+ SL    WAGP
Sbjct  1    MFYGAFPPEFNSGRMYSGPGAGSLVAAATAWQSLATELQSTATSYAATISSLTAGPWAGP  60

Query  60   VVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQIL  119
              + +  AA P+V W+       ++   Q  E   AYE A    VP A I  NRA    L
Sbjct  61   SSLAMASAAAPYVAWMQQTAAAAAQSATQATEAAAAYETAFAAHVPPAVIAENRALLAQL  120

Query  120  IDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPP  171
            +  N  GQ T+ IA  + +Y +FW +D   M  Y    + A +KLT +   P
Sbjct  121  VATNLFGQNTSAIAANEAQYGEFWAQDATAMDTYFASSATASNKLTEFGPAP  172


>gi|183981477|ref|YP_001849768.1| PPE family protein [Mycobacterium marinum M]
 gi|183174803|gb|ACC39913.1| PPE family protein [Mycobacterium marinum M]
Length=469

 Score = 97.4 bits (241),  Expect = 9e-19, Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 93/180 (52%), Gaps = 2/180 (1%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDA-WAGP  59
            M + A+PPE+NS  +Y GPG   MLAAA AW  L  E+ +   S++  +  L+   W GP
Sbjct  1    MFYAAFPPEINSGRMYTGPGSGPMLAAAVAWNGLAAELQSTAASYSSVISGLISGSWVGP  60

Query  60   VVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQIL  119
              + +  AA P+V W+     Q ++   Q      AYE A    VP   I  NR++   L
Sbjct  61   SALAMAAAAGPYVTWVNSTAAQATQAADQATAAAGAYEIAFAAHVPPPVIATNRSQLAAL  120

Query  120  IDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPPIAHSTVL  179
            + +N +GQ TA IA  + +Y + W +D   M  Y    S A S++TP+  PP I  ++ L
Sbjct  121  VASNLVGQNTAAIAATEAQYAEMWVQDAIAMDTYA-SASAAASQVTPFSEPPQIVDASGL  179


>gi|212596561|gb|ACJ35588.1| PPE19 [Mycobacterium intracellulare ATCC 13950]
Length=475

 Score = 97.4 bits (241),  Expect = 9e-19, Method: Compositional matrix adjust.
 Identities = 64/172 (38%), Positives = 90/172 (53%), Gaps = 1/172 (0%)

Query  1    MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDA-WAGP  59
            M + A+PPE NS  +Y+GPG  S++AAA AW+SL  E+ +   S+  T+ SL    WAGP
Sbjct  9    MFYGAFPPEFNSGRMYSGPGAGSLVAAATAWQSLATELQSTATSYAATISSLTAGPWAGP  68

Query  60   VVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQIL  119
              + +  AA P+V W+       ++   Q  E   AYE A    VP A I  NRA    L
Sbjct  69   SSLAMASAAAPYVAWMQQTAAAAAQSATQATEAAAAYETAFAAHVPPAVIAENRALLAQL  128

Query  120  IDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPP  171
            +  N  GQ T+ IA  + +Y +FW +D   M  Y    + A +KLT +   P
Sbjct  129  VATNLFGQNTSAIAANEAQYGEFWAQDATAMDTYFASSATASNKLTEFGPAP  180



Lambda     K      H
   0.319    0.131    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 198992683544


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40