BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2431c Length=99 Score E Sequences producing significant alignments: (Bits) Value gi|15841952|ref|NP_336989.1| PE family protein [Mycobacterium tu... 195 2e-48 gi|308232128|ref|ZP_07664009.1| PE family protein [Mycobacterium... 187 7e-46 gi|289576160|ref|ZP_06456387.1| conserved hypothetical protein [... 60.5 8e-08 gi|148824634|ref|YP_001289388.1| hypothetical protein TBFG_13461... 59.7 1e-07 gi|183980414|ref|YP_001848705.1| PE family protein [Mycobacteriu... 55.5 3e-06 gi|333989636|ref|YP_004522250.1| PE family protein PE8 [Mycobact... 55.1 4e-06 gi|254552493|ref|ZP_05142940.1| PE-PGRS family protein [Mycobact... 55.1 4e-06 gi|148663252|ref|YP_001284775.1| PE-PGRS family protein [Mycobac... 54.7 4e-06 gi|294995841|ref|ZP_06801532.1| PE-PGRS family protein [Mycobact... 54.7 4e-06 gi|148824595|ref|YP_001289349.1| PE-PGRS family protein [Mycobac... 54.7 4e-06 gi|326905228|gb|EGE52161.1| LOW QUALITY PROTEIN: PE-PGRS family ... 54.7 4e-06 gi|339296212|gb|AEJ48323.1| hypothetical protein CCDC5079_3134 [... 54.7 5e-06 gi|297636048|ref|ZP_06953828.1| PE-PGRS family protein [Mycobact... 54.7 5e-06 gi|289747210|ref|ZP_06506588.1| PE-PGRS family protein [Mycobact... 54.7 5e-06 gi|57117101|ref|YP_177968.1| PE-PGRS family protein [Mycobacteri... 54.7 5e-06 gi|306786274|ref|ZP_07424596.1| PE-PGRS family protein [Mycobact... 54.7 5e-06 gi|313660379|ref|ZP_07817259.1| PE-PGRS family protein [Mycobact... 54.7 5e-06 gi|297733047|ref|ZP_06962165.1| PE-PGRS family protein [Mycobact... 54.7 5e-06 gi|341603337|emb|CCC66018.1| PE-PGRS family protein [Mycobacteri... 54.3 5e-06 gi|121639312|ref|YP_979536.1| PE-PGRS family protein [Mycobacter... 54.3 5e-06 gi|31794568|ref|NP_857061.1| PE-PGRS family protein [Mycobacteri... 54.3 5e-06 gi|289444956|ref|ZP_06434700.1| predicted protein [Mycobacterium... 54.3 6e-06 gi|339633393|ref|YP_004725035.1| PE-PGRS family protein [Mycobac... 54.3 6e-06 gi|254233989|ref|ZP_04927314.1| PE-PGRS family protein [Mycobact... 54.3 6e-06 gi|167966935|ref|ZP_02549212.1| PE_PGRS family protein [Mycobact... 54.3 6e-06 gi|306782455|ref|ZP_07420792.1| PE-PGRS family protein [Mycobact... 54.3 6e-06 gi|298526867|ref|ZP_07014276.1| predicted protein [Mycobacterium... 54.3 7e-06 gi|15842981|ref|NP_338018.1| PE_PGRS family protein [Mycobacteri... 53.5 9e-06 gi|289576119|ref|ZP_06456346.1| PE-PGRS family protein [Mycobact... 53.5 1e-05 gi|308232448|ref|ZP_07416066.2| PE-PGRS family protein [Mycobact... 53.5 1e-05 gi|289759547|ref|ZP_06518925.1| conserved hypothetical protein [... 53.5 1e-05 gi|308379499|ref|ZP_07486507.2| putative PE family protein [Myco... 53.5 1e-05 gi|308378305|ref|ZP_07482161.2| putative PE family protein [Myco... 53.5 1e-05 gi|308376105|ref|ZP_07446063.2| putative PE family protein [Myco... 53.5 1e-05 gi|308372528|ref|ZP_07428966.2| putative PE family protein [Myco... 53.5 1e-05 gi|308406142|ref|ZP_07495280.2| putative PE family protein [Myco... 53.1 1e-05 gi|308377332|ref|ZP_07441876.2| putative PE family protein [Myco... 53.1 1e-05 gi|289752102|ref|ZP_06511480.1| pe-pgrs family protein [Mycobact... 53.1 1e-05 gi|308380681|ref|ZP_07490728.2| putative PE family protein [Myco... 53.1 1e-05 gi|339299812|gb|AEJ51922.1| PE_PGRS family protein [Mycobacteriu... 53.1 1e-05 gi|308373731|ref|ZP_07433473.2| putative PE family protein [Myco... 53.1 1e-05 gi|289763569|ref|ZP_06522947.1| PE-PGRS family protein [Mycobact... 52.4 2e-05 gi|296170857|ref|ZP_06852418.1| conserved hypothetical protein [... 52.0 3e-05 gi|333989806|ref|YP_004522420.1| PE family protein PE19 [Mycobac... 50.4 9e-05 gi|342861310|ref|ZP_08717958.1| hypothetical protein MCOL_20601 ... 50.1 1e-04 gi|254775399|ref|ZP_05216915.1| hypothetical protein MaviaA2_121... 48.9 3e-04 gi|342861305|ref|ZP_08717953.1| hypothetical protein MCOL_20576 ... 48.5 4e-04 gi|41407605|ref|NP_960441.1| hypothetical protein MAP1507 [Mycob... 48.1 4e-04 gi|240172418|ref|ZP_04751077.1| PE family protein [Mycobacterium... 47.0 0.001 gi|254820293|ref|ZP_05225294.1| hypothetical protein MintA_10211... 47.0 0.001 >gi|15841952|ref|NP_336989.1| PE family protein [Mycobacterium tuberculosis CDC1551] gi|31793611|ref|NP_856104.1| PE family protein [Mycobacterium bovis AF2122/97] gi|57116989|ref|YP_177882.1| PE family protein [Mycobacterium tuberculosis H37Rv] 67 more sequence titles Length=99 Score = 195 bits (495), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 99/99 (100%), Positives = 99/99 (100%), Gaps = 0/99 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR Sbjct 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIKTFS 99 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIKTFS Sbjct 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIKTFS 99 >gi|308232128|ref|ZP_07664009.1| PE family protein [Mycobacterium tuberculosis SUMu001] gi|308369715|ref|ZP_07666790.1| PE family protein [Mycobacterium tuberculosis SUMu002] gi|308373409|ref|ZP_07667574.1| PE family protein [Mycobacterium tuberculosis SUMu005] 11 more sequence titles Length=96 Score = 187 bits (474), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 95/96 (99%), Positives = 96/96 (100%), Gaps = 0/96 (0%) Query 4 VITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYARKYR 63 +ITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYARKYR Sbjct 1 MITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYARKYR 60 Query 64 QTIAAAAVVLEEFAHALTTGADKYATAEADNIKTFS 99 QTIAAAAVVLEEFAHALTTGADKYATAEADNIKTFS Sbjct 61 QTIAAAAVVLEEFAHALTTGADKYATAEADNIKTFS 96 >gi|289576160|ref|ZP_06456387.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289540591|gb|EFD45169.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] Length=99 Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 35/98 (36%), Positives = 49/98 (50%), Gaps = 0/98 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSF+ T P+AL AA V I D + + A+ PPAAD VS + ++E+ Sbjct 1 MSFIFTTPQALDNAAKSVSGIHDLWLADSKTAITVVNAIVPPAADPVSNRMVGRIIEHMA 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIKTF 98 +Y+Q + A L F+ L A+ Y AEA N TF Sbjct 61 QYQQISSQALEYLRGFSQGLAENAEAYRLAEAQNSTTF 98 >gi|148824634|ref|YP_001289388.1| hypothetical protein TBFG_13461 [Mycobacterium tuberculosis F11] gi|289449127|ref|ZP_06438871.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289571656|ref|ZP_06451883.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] 15 more sequence titles Length=99 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/98 (36%), Positives = 49/98 (50%), Gaps = 0/98 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSF+ T P+AL AA V I D + + A+ PPAAD VS + ++E+ Sbjct 1 MSFIFTTPQALDNAAKSVSGIHDLWLADSKTAITVVNAIVPPAADPVSNRMVGRILEHMA 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIKTF 98 +Y+Q + A L F+ L A+ Y AEA N TF Sbjct 61 QYQQISSQALEYLRGFSQGLAENAEAYRLAEAQNSTTF 98 >gi|183980414|ref|YP_001848705.1| PE family protein [Mycobacterium marinum M] gi|183173740|gb|ACC38850.1| PE family protein [Mycobacterium marinum M] Length=496 Score = 55.5 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 38/94 (41%), Positives = 48/94 (52%), Gaps = 0/94 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MS+VIT PE LT AAT++ I + A VA TT V AAD VS A + + Sbjct 1 MSYVITAPEMLTTAATDLDGIGSAIKAASAAVAGPTTGVAAAAADEVSGAIAKLFGMFGQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADN 94 +Y+ +A A+ EF L T D YA EA N Sbjct 61 EYQSVVAQASAFQTEFTRLLATAGDSYAITEASN 94 >gi|333989636|ref|YP_004522250.1| PE family protein PE8 [Mycobacterium sp. JDM601] gi|333485604|gb|AEF34996.1| PE family protein PE8 [Mycobacterium sp. JDM601] Length=273 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 37/92 (41%), Positives = 49/92 (54%), Gaps = 2/92 (2%) Query 1 MSFVITNPEALTVAATEVRRIRD-RAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYA 59 MSFV T+PEA+ A+ ++ I Q+ A AP TT + P AD VS AT Y Sbjct 1 MSFVTTHPEAMAATASNLQAIGSAMTAQNTAAAAP-TTGIAPAGADEVSVLQATQFAAYG 59 Query 60 RKYRQTIAAAAVVLEEFAHALTTGADKYATAE 91 + Y+Q A AA + E F + L T AD Y + E Sbjct 60 QLYQQISAQAAAIQEMFVNTLRTSADSYGSTE 91 >gi|254552493|ref|ZP_05142940.1| PE-PGRS family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=410 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 96 >gi|148663252|ref|YP_001284775.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148507404|gb|ABQ75213.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=582 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 96 >gi|294995841|ref|ZP_06801532.1| PE-PGRS family protein [Mycobacterium tuberculosis 210] Length=305 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 96 >gi|148824595|ref|YP_001289349.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|148723122|gb|ABR07747.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] Length=731 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 96 >gi|326905228|gb|EGE52161.1| LOW QUALITY PROTEIN: PE-PGRS family protein [Mycobacterium tuberculosis W-148] Length=233 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 96 >gi|339296212|gb|AEJ48323.1| hypothetical protein CCDC5079_3134 [Mycobacterium tuberculosis CCDC5079] Length=731 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 96 >gi|297636048|ref|ZP_06953828.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207] Length=221 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 96 >gi|289747210|ref|ZP_06506588.1| PE-PGRS family protein [Mycobacterium tuberculosis 02_1987] gi|289687738|gb|EFD55226.1| PE-PGRS family protein [Mycobacterium tuberculosis 02_1987] Length=189 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 96 >gi|57117101|ref|YP_177968.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|253800434|ref|YP_003033435.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|7441235|pir||C70974 hypothetical glycine-rich protein Rv3388 - Mycobacterium tuberculosis (strain H37RV) gi|38490366|emb|CAE55593.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|253321937|gb|ACT26540.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|328460166|gb|AEB05589.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207] gi|344221227|gb|AEN01858.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=731 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 96 >gi|306786274|ref|ZP_07424596.1| PE-PGRS family protein [Mycobacterium tuberculosis SUMu003] gi|308329137|gb|EFP17988.1| PE-PGRS family protein [Mycobacterium tuberculosis SUMu003] Length=156 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 96 >gi|313660379|ref|ZP_07817259.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN V2475] Length=173 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 96 >gi|297733047|ref|ZP_06962165.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN R506] Length=174 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 96 >gi|341603337|emb|CCC66018.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=750 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 96 >gi|121639312|ref|YP_979536.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991809|ref|YP_002646498.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121494960|emb|CAL73446.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224774924|dbj|BAH27730.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] Length=750 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 96 >gi|31794568|ref|NP_857061.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31620165|emb|CAD95608.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=749 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 96 >gi|289444956|ref|ZP_06434700.1| predicted protein [Mycobacterium tuberculosis T46] gi|289417875|gb|EFD15115.1| predicted protein [Mycobacterium tuberculosis T46] Length=391 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 96 >gi|339633393|ref|YP_004725035.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339332749|emb|CCC28470.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=724 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 96 >gi|254233989|ref|ZP_04927314.1| PE-PGRS family protein [Mycobacterium tuberculosis C] gi|124599518|gb|EAY58622.1| PE-PGRS family protein [Mycobacterium tuberculosis C] Length=154 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 96 >gi|167966935|ref|ZP_02549212.1| PE_PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=144 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 96 >gi|306782455|ref|ZP_07420792.1| PE-PGRS family protein [Mycobacterium tuberculosis SUMu002] gi|308324906|gb|EFP13757.1| PE-PGRS family protein [Mycobacterium tuberculosis SUMu002] Length=147 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 96 >gi|298526867|ref|ZP_07014276.1| predicted protein [Mycobacterium tuberculosis 94_M4241A] gi|298496661|gb|EFI31955.1| predicted protein [Mycobacterium tuberculosis 94_M4241A] Length=261 Score = 54.3 bits (129), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 45 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 104 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 105 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 140 >gi|15842981|ref|NP_338018.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13883320|gb|AAK47832.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=775 Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 45 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 104 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 105 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 140 >gi|289576119|ref|ZP_06456346.1| PE-PGRS family protein [Mycobacterium tuberculosis K85] gi|289540550|gb|EFD45128.1| PE-PGRS family protein [Mycobacterium tuberculosis K85] Length=180 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 96 >gi|308232448|ref|ZP_07416066.2| PE-PGRS family protein [Mycobacterium tuberculosis SUMu001] gi|308213960|gb|EFO73359.1| PE-PGRS family protein [Mycobacterium tuberculosis SUMu001] Length=182 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 15 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 74 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 75 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 110 >gi|289759547|ref|ZP_06518925.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|289715111|gb|EFD79123.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] Length=247 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 45 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 104 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 105 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 140 >gi|308379499|ref|ZP_07486507.2| putative PE family protein [Mycobacterium tuberculosis SUMu010] gi|308356828|gb|EFP45679.1| putative PE family protein [Mycobacterium tuberculosis SUMu010] Length=203 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 45 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 104 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 105 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 140 >gi|308378305|ref|ZP_07482161.2| putative PE family protein [Mycobacterium tuberculosis SUMu009] gi|308352986|gb|EFP41837.1| putative PE family protein [Mycobacterium tuberculosis SUMu009] Length=201 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 45 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 104 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 105 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 140 >gi|308376105|ref|ZP_07446063.2| putative PE family protein [Mycobacterium tuberculosis SUMu007] gi|308344329|gb|EFP33180.1| putative PE family protein [Mycobacterium tuberculosis SUMu007] Length=217 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 45 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 104 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 105 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 140 >gi|308372528|ref|ZP_07428966.2| putative PE family protein [Mycobacterium tuberculosis SUMu004] gi|308332972|gb|EFP21823.1| putative PE family protein [Mycobacterium tuberculosis SUMu004] Length=142 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 45 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 104 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 105 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 140 >gi|308406142|ref|ZP_07495280.2| putative PE family protein [Mycobacterium tuberculosis SUMu012] gi|308364376|gb|EFP53227.1| putative PE family protein [Mycobacterium tuberculosis SUMu012] Length=180 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 45 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 104 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 105 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 140 >gi|308377332|ref|ZP_07441876.2| putative PE family protein [Mycobacterium tuberculosis SUMu008] gi|308348261|gb|EFP37112.1| putative PE family protein [Mycobacterium tuberculosis SUMu008] Length=199 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 45 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 104 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 105 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 140 >gi|289752102|ref|ZP_06511480.1| pe-pgrs family protein [Mycobacterium tuberculosis T92] gi|289692689|gb|EFD60118.1| pe-pgrs family protein [Mycobacterium tuberculosis T92] Length=144 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 45 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 104 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 105 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 140 >gi|308380681|ref|ZP_07490728.2| putative PE family protein [Mycobacterium tuberculosis SUMu011] gi|308360778|gb|EFP49629.1| putative PE family protein [Mycobacterium tuberculosis SUMu011] Length=186 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 45 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 104 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 105 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 140 >gi|339299812|gb|AEJ51922.1| PE_PGRS family protein [Mycobacterium tuberculosis CCDC5180] Length=419 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 96 >gi|308373731|ref|ZP_07433473.2| putative PE family protein [Mycobacterium tuberculosis SUMu005] gi|308336589|gb|EFP25440.1| putative PE family protein [Mycobacterium tuberculosis SUMu005] Length=159 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 45 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 104 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 105 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 140 >gi|289763569|ref|ZP_06522947.1| PE-PGRS family protein [Mycobacterium tuberculosis GM 1503] gi|289711075|gb|EFD75091.1| PE-PGRS family protein [Mycobacterium tuberculosis GM 1503] Length=252 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/96 (37%), Positives = 51/96 (54%), Gaps = 0/96 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVI NPE L AAT++ IR + A A T V AD VS + ++A+ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIK 96 Y+ A A + ++F ALT+G + YA AE+ ++ Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVE 96 >gi|296170857|ref|ZP_06852418.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894513|gb|EFG74254.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=133 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 33/87 (38%), Positives = 44/87 (51%), Gaps = 0/87 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFVIT P+ L AA +++ I +D A TTAV PPAAD VS + A Y + Sbjct 1 MSFVITAPDTLAAAAGDLQGIGSAIAVADGAAATPTTAVFPPAADAVSVRTAALFAAYGQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKY 87 +Y+Q A A + L +D Y Sbjct 61 QYQQIAARAEAFHAQLVQTLVGSSDSY 87 >gi|333989806|ref|YP_004522420.1| PE family protein PE19 [Mycobacterium sp. JDM601] gi|333485774|gb|AEF35166.1| PE family protein PE19 [Mycobacterium sp. JDM601] Length=99 Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 33/87 (38%), Positives = 44/87 (51%), Gaps = 0/87 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFV T PEAL AA+E+R I + A TT + P AAD VS A +A+ Sbjct 1 MSFVNTQPEALASAASELRGIGSVVAAQNMAAAGPTTVLPPAAADEVSALTAALFSAHAQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKY 87 Y++ A AA + E F L ++ Y Sbjct 61 AYQEVSAQAAAIHEAFVRTLALSSESY 87 >gi|342861310|ref|ZP_08717958.1| hypothetical protein MCOL_20601 [Mycobacterium colombiense CECT 3035] gi|342131210|gb|EGT84491.1| hypothetical protein MCOL_20601 [Mycobacterium colombiense CECT 3035] Length=99 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/91 (39%), Positives = 45/91 (50%), Gaps = 0/91 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFV T PEAL AA ++ I +A A TT V P AAD VS A + + Sbjct 1 MSFVTTQPEALAAAAGNLQTIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHGQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKYATAE 91 Y+ A AA + E F + L+T + YA E Sbjct 61 MYQAVSAQAAAIHEMFVNTLSTSSGSYAVTE 91 >gi|254775399|ref|ZP_05216915.1| hypothetical protein MaviaA2_12121 [Mycobacterium avium subsp. avium ATCC 25291] gi|212595819|gb|ACJ35525.1| PE7 [Mycobacterium avium subsp. avium] gi|336457654|gb|EGO36658.1| PE family protein [Mycobacterium avium subsp. paratuberculosis S397] Length=99 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 34/87 (40%), Positives = 44/87 (51%), Gaps = 0/87 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFV T PEAL AA ++ I +A A TT V P AAD VS A +A+ Sbjct 1 MSFVTTQPEALAAAAGNLQAIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKY 87 Y+ A AA + E F + L+T + Y Sbjct 61 MYQAVSAQAAAIHEAFVNTLSTSSGSY 87 >gi|342861305|ref|ZP_08717953.1| hypothetical protein MCOL_20576 [Mycobacterium colombiense CECT 3035] gi|342131205|gb|EGT84486.1| hypothetical protein MCOL_20576 [Mycobacterium colombiense CECT 3035] Length=99 Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 34/87 (40%), Positives = 44/87 (51%), Gaps = 0/87 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFV T PEAL AA ++ I +A A TT V P AAD VS A +A+ Sbjct 1 MSFVTTQPEALAAAAGNLQAIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKY 87 Y+ A AA + E F + L+T + Y Sbjct 61 MYQAVSAQAAAIHEMFVNTLSTSSGSY 87 >gi|41407605|ref|NP_960441.1| hypothetical protein MAP1507 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395958|gb|AAS03824.1| PE_4 [Mycobacterium avium subsp. paratuberculosis K-10] gi|225698451|gb|ACO07343.1| PE protein [Mycobacterium avium subsp. paratuberculosis] Length=99 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 35/87 (41%), Positives = 44/87 (51%), Gaps = 0/87 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFV T PEAL AA ++ I +A A TT V P AAD VS A YA+ Sbjct 1 MSFVTTQPEALAAAAGNLQAIGWTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAYAQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKY 87 Y+ A AA + E F + L+T + Y Sbjct 61 MYQAVSAQAAAIHEAFVNTLSTSSVSY 87 >gi|240172418|ref|ZP_04751077.1| PE family protein [Mycobacterium kansasii ATCC 12478] Length=99 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/87 (38%), Positives = 43/87 (50%), Gaps = 0/87 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MS ++ P+ L ATE++ I +A A TT V P AADLVS AT +A+ Sbjct 1 MSIMLAQPDMLAATATELQSINFAVRAGNAAAAGPTTGVLPAAADLVSLLTATQFATHAQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKY 87 Y+Q A A V E+ A L A Y Sbjct 61 MYQQISAQAVAVQEQLATTLGISAGSY 87 >gi|254820293|ref|ZP_05225294.1| hypothetical protein MintA_10211 [Mycobacterium intracellulare ATCC 13950] gi|212596298|gb|ACJ35567.1| PE7 [Mycobacterium intracellulare ATCC 13950] Length=99 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/87 (38%), Positives = 43/87 (50%), Gaps = 0/87 (0%) Query 1 MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYAR 60 MSFV T PEAL AA ++ I +A A TT V P AAD VS A +A+ Sbjct 1 MSFVTTQPEALAAAAGNLQAIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60 Query 61 KYRQTIAAAAVVLEEFAHALTTGADKY 87 Y+ A A + E F + L+T + Y Sbjct 61 MYQAVSAQAQAIHEAFVNTLSTSSGSY 87 Lambda K H 0.317 0.124 0.327 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 129711308684 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40