BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2433c Length=96 Score E Sequences producing significant alignments: (Bits) Value gi|15609570|ref|NP_216949.1| hypothetical protein Rv2433c [Mycob... 189 1e-46 gi|289754542|ref|ZP_06513920.1| conserved hypothetical protein [... 187 5e-46 gi|289746216|ref|ZP_06505594.1| conserved hypothetical protein [... 186 8e-46 gi|331695136|ref|YP_004331375.1| type 11 methyltransferase [Pseu... 79.7 1e-13 gi|189426764|ref|YP_001953940.1| hypothetical protein Glov_3722 ... 73.2 1e-11 gi|206603029|gb|EDZ39509.1| Conserved protein of unknown functio... 62.4 2e-08 gi|124516230|gb|EAY57738.1| conserved hypothetical protein [Lept... 61.2 5e-08 gi|311694547|gb|ADP97420.1| dihydrolipoamide dehydrogenase-like ... 50.8 7e-05 gi|170076641|ref|YP_001733279.1| hypothetical protein SYNPCC7002... 50.1 1e-04 gi|158336642|ref|YP_001517816.1| hypothetical protein AM1_3510 [... 44.7 0.005 gi|302879133|ref|YP_003847697.1| hypothetical protein Galf_1927 ... 44.7 0.005 gi|103488181|ref|YP_617742.1| hypothetical protein Sala_2704 [Sp... 42.7 0.018 gi|56751394|ref|YP_172095.1| hypothetical protein syc1385_c [Syn... 42.4 0.024 gi|326797076|ref|YP_004314896.1| hypothetical protein Marme_3850... 42.0 0.027 gi|89900394|ref|YP_522865.1| hypothetical protein Rfer_1602 [Rho... 42.0 0.030 gi|119511185|ref|ZP_01630302.1| hypothetical protein N9414_02696... 42.0 0.034 gi|332709990|ref|ZP_08429946.1| hypothetical protein LYNGBM3L_46... 41.6 0.038 gi|323498209|ref|ZP_08103211.1| hypothetical protein VISI1226_17... 41.2 0.049 gi|300868120|ref|ZP_07112755.1| conserved hypothetical protein [... 40.4 0.081 gi|327537528|gb|EGF24247.1| phosphoenolpyruvate-protein kinase [... 40.4 0.090 gi|17229287|ref|NP_485835.1| hypothetical protein asl1795 [Nosto... 39.7 0.15 gi|254424513|ref|ZP_05038231.1| hypothetical protein S7335_4673 ... 38.9 0.23 gi|159030272|emb|CAO91167.1| unnamed protein product [Microcysti... 38.9 0.29 gi|27367998|ref|NP_763525.1| phosphoenolpyruvate-protein kinase ... 38.1 0.44 gi|170076640|ref|YP_001733278.1| hypothetical protein SYNPCC7002... 38.1 0.48 gi|37676129|ref|NP_936525.1| hypothetical protein VVA0469 [Vibri... 38.1 0.49 gi|258621789|ref|ZP_05716820.1| conserved hypothetical protein [... 37.7 0.54 gi|75910995|ref|YP_325291.1| hypothetical protein Ava_4799 [Anab... 37.7 0.55 gi|302879140|ref|YP_003847704.1| hypothetical protein Galf_1934 ... 37.0 1.1 gi|332304589|ref|YP_004432440.1| hypothetical protein Glaag_0203... 36.6 1.2 gi|254507762|ref|ZP_05119893.1| conserved hypothetical protein [... 36.6 1.3 gi|126658273|ref|ZP_01729423.1| hypothetical protein CY0110_1277... 36.2 1.5 gi|320450976|ref|YP_004203072.1| Mn2+/Zn2+ ABC transporter perme... 35.0 3.9 gi|299132737|ref|ZP_07025932.1| hypothetical protein AfiDRAFT_10... 35.0 3.9 gi|126665520|ref|ZP_01736502.1| hypothetical protein MELB17_2304... 34.7 5.5 gi|218295734|ref|ZP_03496530.1| ABC-3 protein [Thermus aquaticus... 34.7 5.5 gi|88798829|ref|ZP_01114411.1| hypothetical protein MED297_12262... 33.9 7.3 >gi|15609570|ref|NP_216949.1| hypothetical protein Rv2433c [Mycobacterium tuberculosis H37Rv] gi|15841953|ref|NP_336990.1| hypothetical protein MT2507 [Mycobacterium tuberculosis CDC1551] gi|31793613|ref|NP_856106.1| hypothetical protein Mb2459c [Mycobacterium bovis AF2122/97] 64 more sequence titles Length=96 Score = 189 bits (480), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 95/96 (99%), Positives = 96/96 (100%), Gaps = 0/96 (0%) Query 1 VGLRDADERWDTVGQAIGLFLRGHTLRTAAPTALIVGTVLCAVNQGATLAEGAATIGTWV 60 +GLRDADERWDTVGQAIGLFLRGHTLRTAAPTALIVGTVLCAVNQGATLAEGAATIGTWV Sbjct 1 MGLRDADERWDTVGQAIGLFLRGHTLRTAAPTALIVGTVLCAVNQGATLAEGAATIGTWV 60 Query 61 RMVINYLVPFLVASVGYLGARRGVRRASGRSDPSAQ 96 RMVINYLVPFLVASVGYLGARRGVRRASGRSDPSAQ Sbjct 61 RMVINYLVPFLVASVGYLGARRGVRRASGRSDPSAQ 96 >gi|289754542|ref|ZP_06513920.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289695129|gb|EFD62558.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] Length=96 Score = 187 bits (475), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 94/96 (98%), Positives = 95/96 (99%), Gaps = 0/96 (0%) Query 1 VGLRDADERWDTVGQAIGLFLRGHTLRTAAPTALIVGTVLCAVNQGATLAEGAATIGTWV 60 +GLRDADERWDTVGQAIGLFLRGH LRTAAPTALIVGTVLCAVNQGATLAEGAATIGTWV Sbjct 1 MGLRDADERWDTVGQAIGLFLRGHALRTAAPTALIVGTVLCAVNQGATLAEGAATIGTWV 60 Query 61 RMVINYLVPFLVASVGYLGARRGVRRASGRSDPSAQ 96 RMVINYLVPFLVASVGYLGARRGVRRASGRSDPSAQ Sbjct 61 RMVINYLVPFLVASVGYLGARRGVRRASGRSDPSAQ 96 >gi|289746216|ref|ZP_06505594.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289758564|ref|ZP_06517942.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|294994457|ref|ZP_06800148.1| hypothetical protein Mtub2_08057 [Mycobacterium tuberculosis 210] gi|289686744|gb|EFD54232.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289714128|gb|EFD78140.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|326904050|gb|EGE50983.1| hypothetical protein TBPG_01940 [Mycobacterium tuberculosis W-148] Length=96 Score = 186 bits (473), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 94/96 (98%), Positives = 95/96 (99%), Gaps = 0/96 (0%) Query 1 VGLRDADERWDTVGQAIGLFLRGHTLRTAAPTALIVGTVLCAVNQGATLAEGAATIGTWV 60 +GLRDADERWDTVGQAIGLFLRGHT RTAAPTALIVGTVLCAVNQGATLAEGAATIGTWV Sbjct 1 MGLRDADERWDTVGQAIGLFLRGHTRRTAAPTALIVGTVLCAVNQGATLAEGAATIGTWV 60 Query 61 RMVINYLVPFLVASVGYLGARRGVRRASGRSDPSAQ 96 RMVINYLVPFLVASVGYLGARRGVRRASGRSDPSAQ Sbjct 61 RMVINYLVPFLVASVGYLGARRGVRRASGRSDPSAQ 96 >gi|331695136|ref|YP_004331375.1| type 11 methyltransferase [Pseudonocardia dioxanivorans CB1190] gi|326949825|gb|AEA23522.1| Methyltransferase type 11 [Pseudonocardia dioxanivorans CB1190] Length=353 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 41/73 (57%), Positives = 48/73 (66%), Gaps = 0/73 (0%) Query 10 WDTVGQAIGLFLRGHTLRTAAPTALIVGTVLCAVNQGATLAEGAATIGTWVRMVINYLVP 69 W +A L +RG T RTA P AL+VGTVL VNQG T+ T TWVR+ +NY VP Sbjct 23 WTRPREAALLVVRGRTARTAFPVALVVGTVLSLVNQGTTIVADTGTTSTWVRVAVNYAVP 82 Query 70 FLVASVGYLGARR 82 F+VASVGYL RR Sbjct 83 FIVASVGYLAGRR 95 >gi|189426764|ref|YP_001953940.1| hypothetical protein Glov_3722 [Geobacter lovleyi SZ] gi|189423023|gb|ACD97420.1| hypothetical protein Glov_3722 [Geobacter lovleyi SZ] Length=96 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/74 (45%), Positives = 48/74 (65%), Gaps = 0/74 (0%) Query 9 RWDTVGQAIGLFLRGHTLRTAAPTALIVGTVLCAVNQGATLAEGAATIGTWVRMVINYLV 68 W T +A L +G TL+T P A++VG +L +NQ + GAAT TWV++ +N++V Sbjct 9 EWTTWPEAFDLLFQGVTLQTCIPVAIVVGLILSTINQSDVIISGAATSLTWVKVGMNFVV 68 Query 69 PFLVASVGYLGARR 82 PF V+S G+L ARR Sbjct 69 PFCVSSYGFLNARR 82 >gi|206603029|gb|EDZ39509.1| Conserved protein of unknown function [Leptospirillum sp. Group II '5-way CG'] Length=109 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/91 (37%), Positives = 52/91 (58%), Gaps = 4/91 (4%) Query 4 RDADERWDTVGQAIGLFLRGHTLRTAAPTALIVGTVLCAVNQGATLAEGAATIGTWVRMV 63 RDA ++ + ++G+ +TLR + PT+L+VGT L +NQ L + W ++V Sbjct 8 RDAPQK-SLLSFSLGVVFSTYTLRKSVPTSLVVGTFLNGINQFPHLLHHKPLV--WSKVV 64 Query 64 INYLVPFLVASVGYLGAR-RGVRRASGRSDP 93 +NYLVPFLV+S L R + SG+ +P Sbjct 65 LNYLVPFLVSSWSILSTRLSKEEQLSGKKEP 95 >gi|124516230|gb|EAY57738.1| conserved hypothetical protein [Leptospirillum rubarum] gi|124516238|gb|EAY57746.1| conserved protein of unknown function [Leptospirillum rubarum] Length=111 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 30/74 (41%), Positives = 42/74 (57%), Gaps = 2/74 (2%) Query 16 AIGLFLRGHTLRTAAPTALIVGTVLCAVNQGATLAEGAATIGTWVRMVINYLVPFLVASV 75 +IG+ +TLR + PTAL+VGT L +NQ L + + W ++V+NYLVPFLV+S Sbjct 19 SIGVVFSSYTLRKSVPTALVVGTFLNGINQFPHLLDHTPLV--WSKVVLNYLVPFLVSSW 76 Query 76 GYLGARRGVRRASG 89 L R S Sbjct 77 SILSTRLSKEEQSS 90 >gi|311694547|gb|ADP97420.1| dihydrolipoamide dehydrogenase-like protein [Marinobacter adhaerens HP15] Length=81 Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 31/79 (40%), Positives = 44/79 (56%), Gaps = 4/79 (5%) Query 15 QAIGLFLRGHTLRTAAPTALIVGTVLCAVNQGATLAEGAATIGTWVRMVINYLVPFLVAS 74 Q + LF R H + AA AL+VG++L +NQ L G I W+ V+ Y VPF V Sbjct 2 QLLELFRRYH--KQAAKVALVVGSILLLINQHDALF-GYQKI-QWLPAVLTYCVPFCVFM 57 Query 75 VGYLGARRGVRRASGRSDP 93 +G L + R +R+SG + P Sbjct 58 LGKLSSERDCQRSSGLNVP 76 >gi|170076641|ref|YP_001733279.1| hypothetical protein SYNPCC7002_A0005 [Synechococcus sp. PCC 7002] gi|169884310|gb|ACA98023.1| conserved hypothetical protein [Synechococcus sp. PCC 7002] Length=84 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 26/69 (38%), Positives = 37/69 (54%), Gaps = 3/69 (4%) Query 28 TAAPTALIVGTVLCAVNQGATLAEGAATIGTWVRMVINYLVPFLVASVGYLGARRGVRRA 87 TA ALIVGTV+ +N G+ GA T W MV+ Y VP+ V G + +R R Sbjct 18 TAIRVALIVGTVIFCINHGSAFLHGAMTRTRWTSMVLTYFVPYCVNLHGQIASR---MRQ 74 Query 88 SGRSDPSAQ 96 ++ PS++ Sbjct 75 QAKAHPSSE 83 >gi|158336642|ref|YP_001517816.1| hypothetical protein AM1_3510 [Acaryochloris marina MBIC11017] gi|158306883|gb|ABW28500.1| conserved hypothetical protein [Acaryochloris marina MBIC11017] Length=76 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 27/70 (39%), Positives = 38/70 (55%), Gaps = 8/70 (11%) Query 20 FLRGH-------TLRTAA-PTALIVGTVLCAVNQGATLAEGAATIGTWVRMVINYLVPFL 71 FLRG+ T RT A A IVG++L A+N GA L + T W+ V+ Y VP++ Sbjct 3 FLRGYLAALIDPTYRTNALKVAAIVGSILLAINHGAALTQNKMTRARWISAVLTYCVPYM 62 Query 72 VASVGYLGAR 81 V+ G +R Sbjct 63 VSVHGQYVSR 72 >gi|302879133|ref|YP_003847697.1| hypothetical protein Galf_1927 [Gallionella capsiferriformans ES-2] gi|302581922|gb|ADL55933.1| hypothetical protein Galf_1927 [Gallionella capsiferriformans ES-2] Length=84 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 21/54 (39%), Positives = 34/54 (63%), Gaps = 2/54 (3%) Query 21 LRGHTLRTAAPTALIVGTVLCAVNQGATLAEGAATIGTWVRMVINYLVPFLVAS 74 L H + A +++VG+VL VNQG +L G +W+ +++NYLVP+ V+S Sbjct 9 LSRHIVINALKVSVVVGSVLNLVNQGGSLLHGGTI--SWLHLLLNYLVPYCVSS 60 >gi|103488181|ref|YP_617742.1| hypothetical protein Sala_2704 [Sphingopyxis alaskensis RB2256] gi|98978258|gb|ABF54409.1| hypothetical protein Sala_2704 [Sphingopyxis alaskensis RB2256] Length=69 Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust. Identities = 30/65 (47%), Positives = 39/65 (60%), Gaps = 10/65 (15%) Query 23 GHTLRTAAPTALIVGTVLCAVNQGATLAEGAATIGTWVRMVINYLVPFLVASVGYLGARR 82 + LR +A +VG++L A+NQ A + GAA W R +NY VPFLVAS Y AR Sbjct 12 ANALRVSA----VVGSILNAINQSAAVWNGAAI--DWPRFALNYAVPFLVAS--YSAAR- 62 Query 83 GVRRA 87 VR+A Sbjct 63 -VRQA 66 >gi|56751394|ref|YP_172095.1| hypothetical protein syc1385_c [Synechococcus elongatus PCC 6301] gi|56686353|dbj|BAD79575.1| hypothetical protein [Synechococcus elongatus PCC 6301] Length=118 Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust. Identities = 23/54 (43%), Positives = 29/54 (54%), Gaps = 0/54 (0%) Query 28 TAAPTALIVGTVLCAVNQGATLAEGAATIGTWVRMVINYLVPFLVASVGYLGAR 81 TA AL +GT+L +N G A G T WV ++ Y VPFLV+ G AR Sbjct 42 TAVRVALFIGTLLFTINHGWATANGQMTQSRWVSALLTYCVPFLVSLHGQSMAR 95 >gi|326797076|ref|YP_004314896.1| hypothetical protein Marme_3850 [Marinomonas mediterranea MMB-1] gi|326547840|gb|ADZ93060.1| hypothetical protein Marme_3850 [Marinomonas mediterranea MMB-1] Length=72 Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust. Identities = 22/59 (38%), Positives = 35/59 (60%), Gaps = 4/59 (6%) Query 28 TAAPTALIVGTVLCAVNQGATLAEGAATIGTWVRMVINYLVPFLVASVGYLGARRGVRR 86 A AL+VGTVL A+NQG + G W ++++NY VP+ V+S Y A+ +++ Sbjct 16 NAIKIALVVGTVLNAINQGDAIVNGLEI--EWGKLLLNYFVPYCVSS--YSAAKIQIQK 70 >gi|89900394|ref|YP_522865.1| hypothetical protein Rfer_1602 [Rhodoferax ferrireducens T118] gi|89345131|gb|ABD69334.1| conserved hypothetical protein [Rhodoferax ferrireducens T118] Length=74 Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust. Identities = 23/60 (39%), Positives = 36/60 (60%), Gaps = 4/60 (6%) Query 23 GHTLRTAAPTALIVGTVLCAVNQGATLAEGAATIGTWVRMVINYLVPFLVASVGYLGARR 82 G ++ + A++VG++L VNQG+ + G +WV + +NYLVP+ VAS Y AR Sbjct 11 GKIVKNSLRIAVVVGSILNLVNQGSAILAGTGI--SWVHVSLNYLVPYCVAS--YSAARN 66 >gi|119511185|ref|ZP_01630302.1| hypothetical protein N9414_02696 [Nodularia spumigena CCY9414] gi|119464173|gb|EAW45093.1| hypothetical protein N9414_02696 [Nodularia spumigena CCY9414] Length=83 Score = 42.0 bits (97), Expect = 0.034, Method: Compositional matrix adjust. Identities = 19/45 (43%), Positives = 28/45 (63%), Gaps = 0/45 (0%) Query 28 TAAPTALIVGTVLCAVNQGATLAEGAATIGTWVRMVINYLVPFLV 72 TA ALIVG++L +N G+ L +G + W+ I+YLVP+ V Sbjct 20 TAVKVALIVGSILFIINHGSALWQGEMSRERWISAAISYLVPYCV 64 >gi|332709990|ref|ZP_08429946.1| hypothetical protein LYNGBM3L_46010 [Lyngbya majuscula 3L] gi|332351361|gb|EGJ30945.1| hypothetical protein LYNGBM3L_46010 [Lyngbya majuscula 3L] Length=89 Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust. Identities = 25/67 (38%), Positives = 39/67 (59%), Gaps = 4/67 (5%) Query 28 TAAPTALIVGTVLCAVNQGATLAEGAATIGTWVRMVINYLVPFLVASVGY--LGARRGVR 85 TA AL+VG+VL +N G+ L +G T W+ + Y+VP+LV G + +R+ R Sbjct 19 TALRVALVVGSVLFVINHGSALLQGQMTQQRWISGGLTYIVPYLVNIHGQYTMRSRQTAR 78 Query 86 RASGRSD 92 R G++D Sbjct 79 R--GKAD 83 >gi|323498209|ref|ZP_08103211.1| hypothetical protein VISI1226_17315 [Vibrio sinaloensis DSM 21326] gi|323316637|gb|EGA69646.1| hypothetical protein VISI1226_17315 [Vibrio sinaloensis DSM 21326] Length=69 Score = 41.2 bits (95), Expect = 0.049, Method: Compositional matrix adjust. Identities = 22/66 (34%), Positives = 37/66 (57%), Gaps = 2/66 (3%) Query 21 LRGHTLRTAAPTALIVGTVLCAVNQGATLAEGAATIGTWVRMVINYLVPFLVASVGYLGA 80 +R T++ A ALIVGT+L +NQ L + W++ ++ Y VPF+V+ V A Sbjct 1 MRKRTVKRAFVIALIVGTILNLINQWDVLLSSSE--FNWLKGLLTYCVPFIVSIVSSWLA 58 Query 81 RRGVRR 86 R +++ Sbjct 59 ERELKQ 64 >gi|300868120|ref|ZP_07112755.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] gi|300333894|emb|CBN57935.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] Length=77 Score = 40.4 bits (93), Expect = 0.081, Method: Compositional matrix adjust. Identities = 17/45 (38%), Positives = 26/45 (58%), Gaps = 0/45 (0%) Query 28 TAAPTALIVGTVLCAVNQGATLAEGAATIGTWVRMVINYLVPFLV 72 TA AL +GT+L +N G L G T W+ +++ Y +P+LV Sbjct 20 TALKVALFIGTILLIINHGYALFRGQMTSDRWISVLLTYCMPYLV 64 >gi|327537528|gb|EGF24247.1| phosphoenolpyruvate-protein kinase [Rhodopirellula baltica WH47] Length=74 Score = 40.4 bits (93), Expect = 0.090, Method: Compositional matrix adjust. Identities = 20/52 (39%), Positives = 33/52 (64%), Gaps = 0/52 (0%) Query 35 IVGTVLCAVNQGATLAEGAATIGTWVRMVINYLVPFLVASVGYLGARRGVRR 86 IVGT+L A+NQG + G I ++ + Y+VP++V++V +GA R V + Sbjct 23 IVGTILIAINQGDVIWNGNLEIRHAAKIGLTYMVPYIVSTVSSVGALRNVSQ 74 >gi|17229287|ref|NP_485835.1| hypothetical protein asl1795 [Nostoc sp. PCC 7120] gi|17130885|dbj|BAB73494.1| asl1795 [Nostoc sp. PCC 7120] Length=82 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 20/56 (36%), Positives = 32/56 (58%), Gaps = 1/56 (1%) Query 28 TAAPTALIVGTVLCAVNQGATLAEGAATIGTWVRMVINYLVPFLVASVG-YLGARR 82 TA A++VG++L +N G+ L +G WV ++ Y+VP+ V G Y+ RR Sbjct 23 TALKVAVVVGSILFIINHGSALLQGNMGRDRWVSALLTYVVPYFVNIHGQYISIRR 78 >gi|254424513|ref|ZP_05038231.1| hypothetical protein S7335_4673 [Synechococcus sp. PCC 7335] gi|196192002|gb|EDX86966.1| hypothetical protein S7335_4673 [Synechococcus sp. PCC 7335] Length=71 Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust. Identities = 19/49 (39%), Positives = 26/49 (54%), Gaps = 0/49 (0%) Query 33 ALIVGTVLCAVNQGATLAEGAATIGTWVRMVINYLVPFLVASVGYLGAR 81 ALIVGTVL +N G L + + W ++ Y VPF+V+ G R Sbjct 18 ALIVGTVLFTINHGQALVQDEMSPSRWFAALLTYCVPFMVSIHGQSSQR 66 >gi|159030272|emb|CAO91167.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length=83 Score = 38.9 bits (89), Expect = 0.29, Method: Compositional matrix adjust. Identities = 19/55 (35%), Positives = 29/55 (53%), Gaps = 0/55 (0%) Query 28 TAAPTALIVGTVLCAVNQGATLAEGAATIGTWVRMVINYLVPFLVASVGYLGARR 82 T A++VGT+L +N G + G T W+ ++ YLVP+LV G + R Sbjct 19 TGIKVAVVVGTILLTINHGYAIVGGRMTSDRWLAALLTYLVPYLVNVHGQYSSYR 73 >gi|27367998|ref|NP_763525.1| phosphoenolpyruvate-protein kinase [Vibrio vulnificus CMCP6] gi|27359571|gb|AAO08515.1|AE016813_267 Phosphoenolpyruvate-protein kinase [Vibrio vulnificus CMCP6] Length=90 Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust. Identities = 22/84 (27%), Positives = 40/84 (48%), Gaps = 0/84 (0%) Query 5 DADERWDTVGQAIGLFLRGHTLRTAAPTALIVGTVLCAVNQGATLAEGAATIGTWVRMVI 64 + R T+ I L+ + A IVGTVL +N G L G +++++ Sbjct 7 KSTSRKTTLSDFISTAKTPSILKRSIKVAAIVGTVLMMINHGDALFAGQVESERVLKILL 66 Query 65 NYLVPFLVASVGYLGARRGVRRAS 88 Y+VPF V++ + A +R+++ Sbjct 67 TYMVPFCVSTQASVSATLAMRKST 90 >gi|170076640|ref|YP_001733278.1| hypothetical protein SYNPCC7002_A0004 [Synechococcus sp. PCC 7002] gi|169884309|gb|ACA98022.1| conserved hypothetical protein [Synechococcus sp. PCC 7002] Length=92 Score = 38.1 bits (87), Expect = 0.48, Method: Compositional matrix adjust. Identities = 27/86 (32%), Positives = 38/86 (45%), Gaps = 8/86 (9%) Query 17 IGLFLRGHTLRTAAPTA----LIVGTVLCAVNQGATLAEGAATIGTWVRMVINYLVPFLV 72 + ++ R RT PTA L VGTV +N G + G T W+ I Y VP+ V Sbjct 3 LTIYFRALGDRTFRPTAIRVALFVGTVHFCINHGVAVLNGTMTSTRWLAAAITYCVPYCV 62 Query 73 ASVGYLGARRGVR----RASGRSDPS 94 G L +R + S ++DP Sbjct 63 NIHGQLVSRLRAEAEAAQESSQADPQ 88 >gi|37676129|ref|NP_936525.1| hypothetical protein VVA0469 [Vibrio vulnificus YJ016] gi|320158271|ref|YP_004190649.1| phosphoenolpyruvate-protein kinase [Vibrio vulnificus MO6-24/O] gi|37200670|dbj|BAC96495.1| conserved hypothetical protein [Vibrio vulnificus YJ016] gi|319933583|gb|ADV88446.1| phosphoenolpyruvate-protein kinase [Vibrio vulnificus MO6-24/O] Length=90 Score = 38.1 bits (87), Expect = 0.49, Method: Compositional matrix adjust. Identities = 22/83 (27%), Positives = 39/83 (47%), Gaps = 0/83 (0%) Query 5 DADERWDTVGQAIGLFLRGHTLRTAAPTALIVGTVLCAVNQGATLAEGAATIGTWVRMVI 64 + R T+ I L+ + A IVGTVL +N G L G +++++ Sbjct 7 KSTSRKTTLSDFISTAKTPSILKRSIKVAAIVGTVLMMINHGDALFAGQVESERVLKILL 66 Query 65 NYLVPFLVASVGYLGARRGVRRA 87 Y+VPF V++ + A +R++ Sbjct 67 TYMVPFCVSTQASVSATLAMRKS 89 >gi|258621789|ref|ZP_05716820.1| conserved hypothetical protein [Vibrio mimicus VM573] gi|258626268|ref|ZP_05721115.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|262171916|ref|ZP_06039594.1| phosphoenolpyruvate-protein kinase [Vibrio mimicus MB-451] gi|258581320|gb|EEW06222.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|258586020|gb|EEW10738.1| conserved hypothetical protein [Vibrio mimicus VM573] gi|261892992|gb|EEY38978.1| phosphoenolpyruvate-protein kinase [Vibrio mimicus MB-451] gi|342324548|gb|EGU20329.1| hypothetical protein SX4_1928 [Vibrio mimicus SX-4] Length=92 Score = 37.7 bits (86), Expect = 0.54, Method: Compositional matrix adjust. Identities = 19/63 (31%), Positives = 35/63 (56%), Gaps = 0/63 (0%) Query 26 LRTAAPTALIVGTVLCAVNQGATLAEGAATIGTWVRMVINYLVPFLVASVGYLGARRGVR 85 L+ + A IVGTVL +N G L G +++++ Y+VPF V++ + A +R Sbjct 30 LKRSVKVAAIVGTVLMMINHGDVLLAGQIESERVLKILLTYMVPFCVSTQASVSATLAMR 89 Query 86 RAS 88 +++ Sbjct 90 KSA 92 >gi|75910995|ref|YP_325291.1| hypothetical protein Ava_4799 [Anabaena variabilis ATCC 29413] gi|75704720|gb|ABA24396.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413] Length=82 Score = 37.7 bits (86), Expect = 0.55, Method: Compositional matrix adjust. Identities = 20/56 (36%), Positives = 30/56 (54%), Gaps = 1/56 (1%) Query 28 TAAPTALIVGTVLCAVNQGATLAEGAATIGTWVRMVINYLVPFLVASVG-YLGARR 82 TA A++VG++L +N G+ L +G W+ I YLVP+ V G Y+ R Sbjct 23 TALKVAVVVGSILFIINHGSALLQGNMGRDRWISAGITYLVPYFVNIHGQYISIHR 78 >gi|302879140|ref|YP_003847704.1| hypothetical protein Galf_1934 [Gallionella capsiferriformans ES-2] gi|302581929|gb|ADL55940.1| hypothetical protein Galf_1934 [Gallionella capsiferriformans ES-2] Length=74 Score = 37.0 bits (84), Expect = 1.1, Method: Compositional matrix adjust. Identities = 22/67 (33%), Positives = 34/67 (51%), Gaps = 4/67 (5%) Query 22 RGHTLRTAAPTALIVGTVLCAVNQGATLAEGAATIGTWVRMVINYLVPFLVASVGYLGAR 81 R + A AL+VGT+L VNQG G ++++++N+ VP V+S Y R Sbjct 11 RRQIMLPALKVALVVGTLLNLVNQGENPISGQPI--NFLQVLLNFFVPICVSS--YSAVR 66 Query 82 RGVRRAS 88 +RR Sbjct 67 NEMRRCE 73 >gi|332304589|ref|YP_004432440.1| hypothetical protein Glaag_0203 [Glaciecola agarilytica 4H-3-7+YE-5] gi|332171918|gb|AEE21172.1| hypothetical protein Glaag_0203 [Glaciecola sp. 4H-3-7+YE-5] Length=86 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 29/86 (34%), Positives = 47/86 (55%), Gaps = 6/86 (6%) Query 13 VGQAIGLF--LRGHTL-RTAAPTALIVGTVLCAVNQGATLAEGAATIGTWVRMVINYLVP 69 + + IGL L TL + + TALIVG VL +NQ + A + W M++ ++VP Sbjct 2 INKNIGLLNQLFNPTLVKRSLATALIVGAVLNVINQYDGVFGQAPIL--WGSMLLTFIVP 59 Query 70 FLVASV-GYLGARRGVRRASGRSDPS 94 + V+SV G L R+ ++ + +S S Sbjct 60 YFVSSVSGMLTLRQFAKQQATKSSTS 85 >gi|254507762|ref|ZP_05119893.1| conserved hypothetical protein [Vibrio parahaemolyticus 16] gi|219549287|gb|EED26281.1| conserved hypothetical protein [Vibrio parahaemolyticus 16] Length=58 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 17/55 (31%), Positives = 31/55 (57%), Gaps = 2/55 (3%) Query 34 LIVGTVLCAVNQGATLAEGAATIGTWVRMVINYLVPFLVASVGYLGARRGVRRAS 88 ++VGT+L +NQG LA G + W ++++ Y VPF V+ +R + + + Sbjct 1 MVVGTLLNLINQGDALATGLSL--NWFKVMLTYCVPFAVSLASSWFTQREIEKKN 53 >gi|126658273|ref|ZP_01729423.1| hypothetical protein CY0110_12777 [Cyanothece sp. CCY0110] gi|126620422|gb|EAZ91141.1| hypothetical protein CY0110_12777 [Cyanothece sp. CCY0110] Length=83 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 17/61 (28%), Positives = 32/61 (53%), Gaps = 1/61 (1%) Query 27 RTAAPTALIVGTVLCAVNQGATLAEGAATIGTWVRMVINYLVPFLVASVG-YLGARRGVR 85 + A AL+VG++ + G + +G T W+ ++ Y VP++V G Y+ RR + Sbjct 18 KMAIKVALVVGSIFFTIIHGKAVMQGKMTQDCWISGLLTYCVPYIVNIQGQYVMGRRKQK 77 Query 86 R 86 + Sbjct 78 K 78 >gi|320450976|ref|YP_004203072.1| Mn2+/Zn2+ ABC transporter permease [Thermus scotoductus SA-01] gi|320151145|gb|ADW22523.1| Mn2+/Zn2+ ABC transporter, permease protein [Thermus scotoductus SA-01] Length=268 Score = 35.0 bits (79), Expect = 3.9, Method: Compositional matrix adjust. Identities = 24/70 (35%), Positives = 34/70 (49%), Gaps = 1/70 (1%) Query 14 GQAIGLFLRGHTLRTAAPTALIVGTVLCAVNQGATLAEGAATIGTWVRMVINYLVPFLVA 73 G A+GLFLRG L A P +V + V + L+E A IG + + + FL Sbjct 50 GVALGLFLRGEPLWFALPFTFLVAMAITLVKEKTELSEDTA-IGVFFALSVALGAVFLSK 108 Query 74 SVGYLGARRG 83 + GY+G G Sbjct 109 ARGYVGDAMG 118 >gi|299132737|ref|ZP_07025932.1| hypothetical protein AfiDRAFT_1061 [Afipia sp. 1NLS2] gi|298592874|gb|EFI53074.1| hypothetical protein AfiDRAFT_1061 [Afipia sp. 1NLS2] Length=93 Score = 35.0 bits (79), Expect = 3.9, Method: Compositional matrix adjust. Identities = 20/57 (36%), Positives = 33/57 (58%), Gaps = 4/57 (7%) Query 33 ALIVGTVLCAVNQG-ATLAEGAATIGTWVRMVINYLVPFLVASVGYLGARRGVRRAS 88 ALIVGT+L +NQG A +G W ++++ + VP+ VA+ G + R R++ Sbjct 39 ALIVGTILNLINQGDALFGDGRV---NWAKIILTFAVPYCVATYGAVSYRLTAPRSA 92 >gi|126665520|ref|ZP_01736502.1| hypothetical protein MELB17_23045 [Marinobacter sp. ELB17] gi|126630148|gb|EBA00764.1| hypothetical protein MELB17_23045 [Marinobacter sp. ELB17] Length=108 Score = 34.7 bits (78), Expect = 5.5, Method: Compositional matrix adjust. Identities = 24/72 (34%), Positives = 38/72 (53%), Gaps = 6/72 (8%) Query 29 AAPTALIVGTVLCAVNQGATLAEGAATIGTWVRMVINYLVPFLVASVGY----LGARRGV 84 AA A +VGT+L +NQ + GA ++ WV++ + Y VP++V++ L RR Sbjct 30 AAKLAAVVGTLLVIINQWEAVV-GAGSMD-WVKVALTYCVPYMVSTYTSVSKDLHLRREA 87 Query 85 RRASGRSDPSAQ 96 A R+ AQ Sbjct 88 ETAVQRAHEEAQ 99 >gi|218295734|ref|ZP_03496530.1| ABC-3 protein [Thermus aquaticus Y51MC23] gi|218243893|gb|EED10420.1| ABC-3 protein [Thermus aquaticus Y51MC23] Length=268 Score = 34.7 bits (78), Expect = 5.5, Method: Compositional matrix adjust. Identities = 24/70 (35%), Positives = 34/70 (49%), Gaps = 1/70 (1%) Query 14 GQAIGLFLRGHTLRTAAPTALIVGTVLCAVNQGATLAEGAATIGTWVRMVINYLVPFLVA 73 G A+GLFLRG L A P +V + V + L+E A IG + + + FL Sbjct 50 GVALGLFLRGEPLWFALPFTFLVAMAITFVKERTELSEDTA-IGVFFALSVALGAIFLAK 108 Query 74 SVGYLGARRG 83 + GY+G G Sbjct 109 ARGYVGDAMG 118 >gi|88798829|ref|ZP_01114411.1| hypothetical protein MED297_12262 [Reinekea sp. MED297] gi|88778309|gb|EAR09502.1| hypothetical protein MED297_12262 [Reinekea sp. MED297] Length=86 Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 2/50 (4%) Query 32 TALIVGTVLCAVNQGATLAEGAATIGTWVRMVINYLVPFLVASVGYLGAR 81 TAL+VG+VL +NQ + L G ++ W + + YLVPF V Y R Sbjct 14 TALVVGSVLTVINQWSALV-GEESL-RWPALFLTYLVPFSVFIYSYRANR 61 Lambda K H 0.323 0.137 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 131127635258 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40