BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2436
Length=304
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609573|ref|NP_216952.1| ribokinase RBSK [Mycobacterium tube... 588 4e-166
gi|15841957|ref|NP_336994.1| ribokinase [Mycobacterium tuberculo... 586 1e-165
gi|292659582|pdb|3GO6|A Chain A, Crystal Structure Of M. Tubercu... 585 2e-165
gi|31793616|ref|NP_856109.1| ribokinase RBSK [Mycobacterium bovi... 585 4e-165
gi|308232131|ref|ZP_07415044.2| ribokinase rbsK [Mycobacterium t... 565 4e-159
gi|323718943|gb|EGB28093.1| ribokinase rbsK [Mycobacterium tuber... 544 6e-153
gi|308405112|ref|ZP_07494237.2| ribokinase rbsK [Mycobacterium t... 543 1e-152
gi|339298948|gb|AEJ51058.1| ribokinase rbsK [Mycobacterium tuber... 541 7e-152
gi|289751043|ref|ZP_06510421.1| LOW QUALITY PROTEIN: ribokinase ... 418 5e-115
gi|342857831|ref|ZP_08714487.1| hypothetical protein MCOL_03115 ... 361 6e-98
gi|254819842|ref|ZP_05224843.1| hypothetical protein MintA_07954... 360 2e-97
gi|336458213|gb|EGO37194.1| sugar kinase, ribokinase [Mycobacter... 347 1e-93
gi|41408349|ref|NP_961185.1| hypothetical protein MAP2251 [Mycob... 346 2e-93
gi|240170852|ref|ZP_04749511.1| hypothetical protein MkanA1_1618... 345 4e-93
gi|254774560|ref|ZP_05216076.1| hypothetical protein MaviaA2_078... 339 3e-91
gi|296170502|ref|ZP_06852089.1| ribokinase [Mycobacterium parasc... 338 5e-91
gi|118463956|ref|YP_880970.1| kinase, pfkB family protein [Mycob... 335 7e-90
gi|126436121|ref|YP_001071812.1| ribokinase-like domain-containi... 325 7e-87
gi|108800505|ref|YP_640702.1| PfkB [Mycobacterium sp. MCS] >gi|1... 323 2e-86
gi|333990118|ref|YP_004522732.1| ribokinase-like domain-containi... 260 2e-67
gi|118472840|ref|YP_888854.1| ribokinase [Mycobacterium smegmati... 251 8e-65
gi|120404889|ref|YP_954718.1| ribokinase [Mycobacterium vanbaale... 247 2e-63
gi|145223230|ref|YP_001133908.1| ribokinase [Mycobacterium gilvu... 241 1e-61
gi|315443688|ref|YP_004076567.1| sugar kinase, ribokinase [Mycob... 238 9e-61
gi|169628707|ref|YP_001702356.1| ribokinase RbsK [Mycobacterium ... 224 2e-56
gi|317508661|ref|ZP_07966317.1| ribokinase [Segniliparus rugosus... 223 2e-56
gi|296393844|ref|YP_003658728.1| PfkB domain-containing protein ... 223 2e-56
gi|226307269|ref|YP_002767229.1| ribokinase [Rhodococcus erythro... 190 2e-46
gi|229493172|ref|ZP_04386964.1| ribokinase [Rhodococcus erythrop... 189 4e-46
gi|333918805|ref|YP_004492386.1| ribokinase [Amycolicicoccus sub... 180 2e-43
gi|226360439|ref|YP_002778217.1| ribokinase [Rhodococcus opacus ... 177 2e-42
gi|54023337|ref|YP_117579.1| putative ribokinase [Nocardia farci... 176 3e-42
gi|312140332|ref|YP_004007668.1| ribokinase [Rhodococcus equi 10... 175 6e-42
gi|111018313|ref|YP_701285.1| ribokinase [Rhodococcus jostii RHA... 175 9e-42
gi|325677092|ref|ZP_08156761.1| ribokinase [Rhodococcus equi ATC... 175 9e-42
gi|34498475|ref|NP_902690.1| ribokinase [Chromobacterium violace... 160 3e-37
gi|296139276|ref|YP_003646519.1| PfkB domain-containing protein ... 160 3e-37
gi|325291798|ref|YP_004277662.1| ribokinase [Agrobacterium sp. H... 159 8e-37
gi|302865741|ref|YP_003834378.1| PfkB domain-containing protein ... 157 2e-36
gi|338824749|gb|EGP58716.1| ribokinase [Agrobacterium tumefacien... 156 3e-36
gi|15807723|ref|NP_285378.1| ribokinase [Deinococcus radiodurans... 156 3e-36
gi|297199008|ref|ZP_06916405.1| ribokinase [Streptomyces sviceus... 156 4e-36
gi|227529897|ref|ZP_03959946.1| ribokinase [Lactobacillus vagina... 155 5e-36
gi|148657386|ref|YP_001277591.1| ribokinase [Roseiflexus sp. RS-... 155 6e-36
gi|315502297|ref|YP_004081184.1| pfkb domain-containing protein ... 155 6e-36
gi|238063171|ref|ZP_04607880.1| ribokinase [Micromonospora sp. A... 155 8e-36
gi|297564700|ref|YP_003683672.1| ribokinase [Meiothermus silvanu... 154 1e-35
gi|320333703|ref|YP_004170414.1| ribokinase [Deinococcus maricop... 154 2e-35
gi|156743693|ref|YP_001433822.1| ribokinase [Roseiflexus castenh... 154 2e-35
gi|298291723|ref|YP_003693662.1| PfkB domain-containing protein ... 152 9e-35
>gi|15609573|ref|NP_216952.1| ribokinase RBSK [Mycobacterium tuberculosis H37Rv]
gi|148662271|ref|YP_001283794.1| ribokinase [Mycobacterium tuberculosis H37Ra]
gi|167969758|ref|ZP_02552035.1| ribokinase [Mycobacterium tuberculosis H37Ra]
gi|1666148|emb|CAB03783.1| RIBOKINASE RBSK [Mycobacterium tuberculosis H37Rv]
gi|148506423|gb|ABQ74232.1| ribokinase [Mycobacterium tuberculosis H37Ra]
Length=304
Score = 588 bits (1516), Expect = 4e-166, Method: Compositional matrix adjust.
Identities = 304/304 (100%), Positives = 304/304 (100%), Gaps = 0/304 (0%)
Query 1 MANASETNVGPMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAA 60
MANASETNVGPMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAA
Sbjct 1 MANASETNVGPMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAA 60
Query 61 ARAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLV 120
ARAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLV
Sbjct 61 ARAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLV 120
Query 121 APGANAHLTPVPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSL 180
APGANAHLTPVPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSL
Sbjct 121 APGANAHLTPVPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSL 180
Query 181 QDLAAIADVVIANEHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGA 240
QDLAAIADVVIANEHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGA
Sbjct 181 QDLAAIADVVIANEHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGA 240
Query 241 GDVFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRANR 300
GDVFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRANR
Sbjct 241 GDVFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRANR 300
Query 301 HNGS 304
HNGS
Sbjct 301 HNGS 304
>gi|15841957|ref|NP_336994.1| ribokinase [Mycobacterium tuberculosis CDC1551]
gi|148823638|ref|YP_001288392.1| ribokinase rbsK [Mycobacterium tuberculosis F11]
gi|253798484|ref|YP_003031485.1| ribokinase rbsK [Mycobacterium tuberculosis KZN 1435]
39 more sequence titles
Length=304
Score = 586 bits (1511), Expect = 1e-165, Method: Compositional matrix adjust.
Identities = 303/304 (99%), Positives = 303/304 (99%), Gaps = 0/304 (0%)
Query 1 MANASETNVGPMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAA 60
MANASETNVGPMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAA
Sbjct 1 MANASETNVGPMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAA 60
Query 61 ARAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLV 120
ARAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLV
Sbjct 61 ARAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLV 120
Query 121 APGANAHLTPVPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSL 180
APGANAHLTPVPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSL
Sbjct 121 APGANAHLTPVPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSL 180
Query 181 QDLAAIADVVIANEHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGA 240
QDLAAIADVVIANEHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGA
Sbjct 181 QDLAAIADVVIANEHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGA 240
Query 241 GDVFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRANR 300
GDVFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSG GDCAPAAAAIDAALRANR
Sbjct 241 GDVFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGAGDCAPAAAAIDAALRANR 300
Query 301 HNGS 304
HNGS
Sbjct 301 HNGS 304
>gi|292659582|pdb|3GO6|A Chain A, Crystal Structure Of M. Tuberculosis Ribokinase (Rv2436)
In Complex With Ribose And Amp-Pnp
gi|292659583|pdb|3GO6|B Chain B, Crystal Structure Of M. Tuberculosis Ribokinase (Rv2436)
In Complex With Ribose And Amp-Pnp
gi|292659584|pdb|3GO7|A Chain A, Crystal Structure Of M. Tuberculosis Ribokinase (Rv2436)
In Complex With Ribose
gi|292659585|pdb|3GO7|B Chain B, Crystal Structure Of M. Tuberculosis Ribokinase (Rv2436)
In Complex With Ribose
Length=310
Score = 585 bits (1509), Expect = 2e-165, Method: Compositional matrix adjust.
Identities = 303/303 (100%), Positives = 303/303 (100%), Gaps = 0/303 (0%)
Query 2 ANASETNVGPMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAA 61
ANASETNVGPMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAA
Sbjct 8 ANASETNVGPMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAA 67
Query 62 RAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVA 121
RAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVA
Sbjct 68 RAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVA 127
Query 122 PGANAHLTPVPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQ 181
PGANAHLTPVPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQ
Sbjct 128 PGANAHLTPVPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQ 187
Query 182 DLAAIADVVIANEHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAG 241
DLAAIADVVIANEHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAG
Sbjct 188 DLAAIADVVIANEHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAG 247
Query 242 DVFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRANRH 301
DVFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRANRH
Sbjct 248 DVFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRANRH 307
Query 302 NGS 304
NGS
Sbjct 308 NGS 310
>gi|31793616|ref|NP_856109.1| ribokinase RBSK [Mycobacterium bovis AF2122/97]
gi|121638318|ref|YP_978542.1| ribokinase rbsK [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224990812|ref|YP_002645499.1| ribokinase [Mycobacterium bovis BCG str. Tokyo 172]
gi|31619209|emb|CAD97323.1| RIBOKINASE RBSK [Mycobacterium bovis AF2122/97]
gi|121493966|emb|CAL72443.1| Ribokinase rbsK [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224773925|dbj|BAH26731.1| ribokinase [Mycobacterium bovis BCG str. Tokyo 172]
gi|341602356|emb|CCC65032.1| Ribokinase rbsK [Mycobacterium bovis BCG str. Moreau RDJ]
Length=304
Score = 585 bits (1507), Expect = 4e-165, Method: Compositional matrix adjust.
Identities = 302/304 (99%), Positives = 302/304 (99%), Gaps = 0/304 (0%)
Query 1 MANASETNVGPMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAA 60
MANASETNVGPMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAA
Sbjct 1 MANASETNVGPMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAA 60
Query 61 ARAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLV 120
ARAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLV
Sbjct 61 ARAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLV 120
Query 121 APGANAHLTPVPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSL 180
APGANAHLTPVPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSL
Sbjct 121 APGANAHLTPVPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSL 180
Query 181 QDLAAIADVVIANEHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGA 240
QDLAAIADVVIANEHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGA
Sbjct 181 QDLAAIADVVIANEHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGA 240
Query 241 GDVFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRANR 300
GDVFAGVLAANWPRNPGSPAERLRALRRACAAG LATLVSG GDCAPAAAAIDAALRANR
Sbjct 241 GDVFAGVLAANWPRNPGSPAERLRALRRACAAGVLATLVSGAGDCAPAAAAIDAALRANR 300
Query 301 HNGS 304
HNGS
Sbjct 301 HNGS 304
>gi|308232131|ref|ZP_07415044.2| ribokinase rbsK [Mycobacterium tuberculosis SUMu001]
gi|308369717|ref|ZP_07418819.2| ribokinase rbsK [Mycobacterium tuberculosis SUMu002]
gi|308371013|ref|ZP_07423555.2| ribokinase rbsK [Mycobacterium tuberculosis SUMu003]
19 more sequence titles
Length=293
Score = 565 bits (1455), Expect = 4e-159, Method: Compositional matrix adjust.
Identities = 292/293 (99%), Positives = 292/293 (99%), Gaps = 0/293 (0%)
Query 12 MAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSG 71
MAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSG
Sbjct 1 MAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSG 60
Query 72 AFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPV 131
AFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPV
Sbjct 61 AFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPV 120
Query 132 PSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVI 191
PSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVI
Sbjct 121 PSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVI 180
Query 192 ANEHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAAN 251
ANEHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAAN
Sbjct 181 ANEHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAAN 240
Query 252 WPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRANRHNGS 304
WPRNPGSPAERLRALRRACAAGALATLVSG GDCAPAAAAIDAALRANRHNGS
Sbjct 241 WPRNPGSPAERLRALRRACAAGALATLVSGAGDCAPAAAAIDAALRANRHNGS 293
>gi|323718943|gb|EGB28093.1| ribokinase rbsK [Mycobacterium tuberculosis CDC1551A]
gi|339295330|gb|AEJ47441.1| ribokinase rbsK [Mycobacterium tuberculosis CCDC5079]
Length=283
Score = 544 bits (1402), Expect = 6e-153, Method: Compositional matrix adjust.
Identities = 281/283 (99%), Positives = 282/283 (99%), Gaps = 0/283 (0%)
Query 22 VNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQ 81
+NMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQ
Sbjct 1 MNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQ 60
Query 82 LRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVPSAVANCDVL 141
LRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVPSAVANCDVL
Sbjct 61 LRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVPSAVANCDVL 120
Query 142 LTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEANDWP 201
LTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEANDWP
Sbjct 121 LTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEANDWP 180
Query 202 SPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAE 261
SPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAE
Sbjct 181 SPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAE 240
Query 262 RLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRANRHNGS 304
RLRALRRACAAGALATLVSG GDCAPAAAAIDAALRANRHNGS
Sbjct 241 RLRALRRACAAGALATLVSGAGDCAPAAAAIDAALRANRHNGS 283
>gi|308405112|ref|ZP_07494237.2| ribokinase rbsK [Mycobacterium tuberculosis SUMu012]
gi|308365303|gb|EFP54154.1| ribokinase rbsK [Mycobacterium tuberculosis SUMu012]
Length=281
Score = 543 bits (1398), Expect = 1e-152, Method: Compositional matrix adjust.
Identities = 281/281 (100%), Positives = 281/281 (100%), Gaps = 0/281 (0%)
Query 24 MDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLR 83
MDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLR
Sbjct 1 MDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLR 60
Query 84 AHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVPSAVANCDVLLT 143
AHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVPSAVANCDVLLT
Sbjct 61 AHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVPSAVANCDVLLT 120
Query 144 QLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEANDWPSP 203
QLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEANDWPSP
Sbjct 121 QLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEANDWPSP 180
Query 204 PTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAERL 263
PTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAERL
Sbjct 181 PTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAERL 240
Query 264 RALRRACAAGALATLVSGVGDCAPAAAAIDAALRANRHNGS 304
RALRRACAAGALATLVSGVGDCAPAAAAIDAALRANRHNGS
Sbjct 241 RALRRACAAGALATLVSGVGDCAPAAAAIDAALRANRHNGS 281
>gi|339298948|gb|AEJ51058.1| ribokinase rbsK [Mycobacterium tuberculosis CCDC5180]
Length=281
Score = 541 bits (1393), Expect = 7e-152, Method: Compositional matrix adjust.
Identities = 280/281 (99%), Positives = 280/281 (99%), Gaps = 0/281 (0%)
Query 24 MDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLR 83
MDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLR
Sbjct 1 MDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLR 60
Query 84 AHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVPSAVANCDVLLT 143
AHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVPSAVANCDVLLT
Sbjct 61 AHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVPSAVANCDVLLT 120
Query 144 QLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEANDWPSP 203
QLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEANDWPSP
Sbjct 121 QLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEANDWPSP 180
Query 204 PTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAERL 263
PTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAERL
Sbjct 181 PTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAERL 240
Query 264 RALRRACAAGALATLVSGVGDCAPAAAAIDAALRANRHNGS 304
RALRRACAAGALATLVSG GDCAPAAAAIDAALRANRHNGS
Sbjct 241 RALRRACAAGALATLVSGAGDCAPAAAAIDAALRANRHNGS 281
>gi|289751043|ref|ZP_06510421.1| LOW QUALITY PROTEIN: ribokinase rbsK [Mycobacterium tuberculosis
T92]
gi|289691630|gb|EFD59059.1| LOW QUALITY PROTEIN: ribokinase rbsK [Mycobacterium tuberculosis
T92]
Length=296
Score = 418 bits (1075), Expect = 5e-115, Method: Compositional matrix adjust.
Identities = 218/219 (99%), Positives = 218/219 (99%), Gaps = 0/219 (0%)
Query 86 LRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVPSAVANCDVLLTQL 145
LRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVPSAVANCDVLLTQL
Sbjct 78 LRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVPSAVANCDVLLTQL 137
Query 146 EIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEANDWPSPPT 205
EIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEANDWPSPPT
Sbjct 138 EIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEANDWPSPPT 197
Query 206 HFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAERLRA 265
HFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAERLRA
Sbjct 198 HFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAERLRA 257
Query 266 LRRACAAGALATLVSGVGDCAPAAAAIDAALRANRHNGS 304
LRRACAAGALATLVSG GDCAPAAAAIDAALRANRHNGS
Sbjct 258 LRRACAAGALATLVSGAGDCAPAAAAIDAALRANRHNGS 296
>gi|342857831|ref|ZP_08714487.1| hypothetical protein MCOL_03115 [Mycobacterium colombiense CECT
3035]
gi|342135164|gb|EGT88330.1| hypothetical protein MCOL_03115 [Mycobacterium colombiense CECT
3035]
Length=286
Score = 361 bits (927), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 201/283 (72%), Positives = 228/283 (81%), Gaps = 4/283 (1%)
Query 19 VGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPA 78
+GSVN+DL+ VDALPRPGETVLA+SLT+ PGGKG NQAVAAARAGA+VQF GA GDD A
Sbjct 1 MGSVNLDLSLSVDALPRPGETVLASSLTQAPGGKGGNQAVAAARAGARVQFVGAVGDDAA 60
Query 79 AAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVP----SA 134
A QLRAHL AN VGLD + +PGPSGTAI+VVDA+AENT++VAPGAN T +
Sbjct 61 AGQLRAHLEANGVGLDGAIEIPGPSGTAIVVVDANAENTIVVAPGANGRFTLTDDRARAV 120
Query 135 VANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIANE 194
VA CDV+LTQLEIPV TA+AAA+ A+SA A+V+VNASPAGQD SL +LAA ADVVI NE
Sbjct 121 VARCDVMLTQLEIPVDTAVAAAQHARSAGAIVVVNASPAGQDPRSLGELAAAADVVITNE 180
Query 195 HEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPR 254
EA++WP P H VITLG GARY+G DG + VPAP V PVDT GAGDVFAGVLAANWP
Sbjct 181 DEADEWPWRPEHLVITLGAHGARYIGTDGEYTVPAPAVDPVDTTGAGDVFAGVLAANWPS 240
Query 255 NPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALR 297
NPGS +R AL+RACAAGALATLV+G GDCAP A AID ALR
Sbjct 241 NPGSRDQRRLALQRACAAGALATLVAGAGDCAPDADAIDKALR 283
>gi|254819842|ref|ZP_05224843.1| hypothetical protein MintA_07954 [Mycobacterium intracellulare
ATCC 13950]
Length=286
Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 202/283 (72%), Positives = 228/283 (81%), Gaps = 4/283 (1%)
Query 19 VGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPA 78
+GSVN+DL+ V ALPRPGETVLA+S+T+ PGGKG NQAVAAARAGA+VQF GA GDDPA
Sbjct 1 MGSVNIDLSLGVSALPRPGETVLASSMTQAPGGKGGNQAVAAARAGARVQFVGAVGDDPA 60
Query 79 AAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVPS----A 134
A QLRAHLRAN VGLD V +PGPSGTA++VVDA+AENT++VAPGAN T
Sbjct 61 AEQLRAHLRANGVGLDGAVEIPGPSGTAVVVVDANAENTIVVAPGANGRFTLTDDRARGV 120
Query 135 VANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIANE 194
VA+CDV+LTQLEIPV TA+AAA+ A+SA AVV+VNASPAGQD +SL +LAA ADVVI NE
Sbjct 121 VADCDVMLTQLEIPVDTAIAAAQHARSAGAVVVVNASPAGQDPASLGELAAAADVVITNE 180
Query 195 HEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPR 254
EAN+WP H V+TLG RGARY GADG + VP+P V VDT GAGDVFAGVLAANWP
Sbjct 181 EEANEWPWRAAHLVVTLGSRGARYAGADGEYSVPSPAVDAVDTTGAGDVFAGVLAANWPP 240
Query 255 NPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALR 297
NPGS ER ALRRACAAGALATLV G GDCAP A AID AL+
Sbjct 241 NPGSADERRLALRRACAAGALATLVPGAGDCAPDAEAIDKALQ 283
>gi|336458213|gb|EGO37194.1| sugar kinase, ribokinase [Mycobacterium avium subsp. paratuberculosis
S397]
Length=292
Score = 347 bits (890), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 203/288 (71%), Positives = 229/288 (80%), Gaps = 4/288 (1%)
Query 16 VCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGD 75
VCVVGSVN+DL+ VDALPRPGETVLA+SL + PGGKG NQAVAAARAGA+VQF GA GD
Sbjct 4 VCVVGSVNLDLSLAVDALPRPGETVLASSLRQAPGGKGGNQAVAAARAGARVQFVGAVGD 63
Query 76 DPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLT----PV 131
D AA QLRAHL+AN VGLD V +PGPSGTAI+VVDA+AENT++VAPGAN T
Sbjct 64 DAAAGQLRAHLQANGVGLDGAVEIPGPSGTAIVVVDANAENTIVVAPGANGRFTLNDERA 123
Query 132 PSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVI 191
+ +A CDV+LTQLEIPVATA+AAAR A+S AVV+VNASPAG+D SL +LAA ADVVI
Sbjct 124 RAVLAGCDVMLTQLEIPVATAVAAARHARSGGAVVVVNASPAGRDPDSLSELAAAADVVI 183
Query 192 ANEHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAAN 251
NE EA++WP P H V+TLG GARYVGADG + VP+P V VDT GAGDVFAGVLAAN
Sbjct 184 TNEEEASEWPWRPRHLVVTLGSHGARYVGADGEYSVPSPDVDAVDTTGAGDVFAGVLAAN 243
Query 252 WPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRAN 299
WP PGSP +R ALRRACAAGALATLV G GDCAP A I+ ALR
Sbjct 244 WPLEPGSPDQRRLALRRACAAGALATLVPGAGDCAPRAEEIERALRGK 291
>gi|41408349|ref|NP_961185.1| hypothetical protein MAP2251 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396705|gb|AAS04568.1| RbsK [Mycobacterium avium subsp. paratuberculosis K-10]
Length=322
Score = 346 bits (888), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 203/288 (71%), Positives = 229/288 (80%), Gaps = 4/288 (1%)
Query 16 VCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGD 75
VCVVGSVN+DL+ VDALPRPGETVLA+SL + PGGKG NQAVAAARAGA+VQF GA GD
Sbjct 34 VCVVGSVNLDLSLAVDALPRPGETVLASSLRQAPGGKGGNQAVAAARAGARVQFVGAVGD 93
Query 76 DPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLT----PV 131
D AA QLRAHL+AN VGLD V +PGPSGTAI+VVDA+AENT++VAPGAN T
Sbjct 94 DAAAGQLRAHLQANGVGLDGAVEIPGPSGTAIVVVDANAENTIVVAPGANGRFTLNDERA 153
Query 132 PSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVI 191
+ +A CDV+LTQLEIPVATA+AAAR A+S AVV+VNASPAG+D SL +LAA ADVVI
Sbjct 154 RAVLAGCDVMLTQLEIPVATAVAAARHARSGGAVVVVNASPAGRDPDSLSELAAAADVVI 213
Query 192 ANEHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAAN 251
NE EA++WP P H V+TLG GARYVGADG + VP+P V VDT GAGDVFAGVLAAN
Sbjct 214 TNEEEASEWPWRPRHLVVTLGSHGARYVGADGEYSVPSPDVDAVDTTGAGDVFAGVLAAN 273
Query 252 WPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRAN 299
WP PGSP +R ALRRACAAGALATLV G GDCAP A I+ ALR
Sbjct 274 WPLEPGSPDQRRLALRRACAAGALATLVPGAGDCAPRAEEIERALRGK 321
>gi|240170852|ref|ZP_04749511.1| hypothetical protein MkanA1_16182 [Mycobacterium kansasii ATCC
12478]
Length=280
Score = 345 bits (886), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 195/279 (70%), Positives = 220/279 (79%), Gaps = 0/279 (0%)
Query 18 VVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDP 77
+VGS+NMDLTF V LPRPGETVLA++L PGGKG NQAVAAARAGA VQF GA GDD
Sbjct 1 MVGSLNMDLTFAVTTLPRPGETVLASALNCAPGGKGGNQAVAAARAGAHVQFVGAVGDDA 60
Query 78 AAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVPSAVAN 137
AA QLRAHL AN VG+D V VPGPSGTAIIVVD AENT++VAPGAN L P+AV +
Sbjct 61 AADQLRAHLLANGVGIDGMVRVPGPSGTAIIVVDTGAENTIVVAPGANGQLKLPPAAVGD 120
Query 138 CDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEA 197
CDVLLTQLEIP TA+AAAR A+SA A+VMVN SPAG+ + +L+A+ADVVIANE EA
Sbjct 121 CDVLLTQLEIPPETAVAAARQARSAGAIVMVNVSPAGRLHGAGPELSAVADVVIANESEA 180
Query 198 NDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPG 257
W P H V+T G RGARYVG DG +V AP VT VDT GAGDVFAGVLAA+WP +
Sbjct 181 QQWRWSPAHLVVTCGARGARYVGVDGELDVAAPAVTAVDTTGAGDVFAGVLAAHWPPDGA 240
Query 258 SPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAAL 296
SPA+RLRAL+RACAAGALAT V+G GDCAP A AI+AAL
Sbjct 241 SPAQRLRALQRACAAGALATTVAGAGDCAPPADAIEAAL 279
>gi|254774560|ref|ZP_05216076.1| hypothetical protein MaviaA2_07803 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=287
Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 199/286 (70%), Positives = 226/286 (80%), Gaps = 4/286 (1%)
Query 18 VVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDP 77
+VGSVN+DL+ VDALPRPGETVLA+SL + PGGKG NQAVAAARAGA+VQF GA GDD
Sbjct 1 MVGSVNLDLSLAVDALPRPGETVLASSLRQAPGGKGGNQAVAAARAGARVQFVGAVGDDA 60
Query 78 AAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLT----PVPS 133
AA QLRAHL+AN VGLD V +PGPSGTAI+VVDA+AENT++VAPGAN T +
Sbjct 61 AAGQLRAHLQANGVGLDGAVEIPGPSGTAIVVVDANAENTIVVAPGANGRFTLNDERARA 120
Query 134 AVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIAN 193
+A CDV+LTQLEIPVATA+AAAR A+S AVV+VNASPAG+D SL +LAA ADVVI N
Sbjct 121 VLAGCDVMLTQLEIPVATAVAAARHARSGGAVVVVNASPAGRDPDSLSELAAAADVVITN 180
Query 194 EHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWP 253
E E ++WP P H V+TLG GARYVGADG + VP+P V VDT GAGDVFAGVLAANWP
Sbjct 181 EEETSEWPWRPRHLVVTLGSHGARYVGADGEYSVPSPDVDAVDTTGAGDVFAGVLAANWP 240
Query 254 RNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRAN 299
PGSP +R ALRRACAAGALATLV G GDCAP A I+ ALR
Sbjct 241 LEPGSPDQRRLALRRACAAGALATLVPGAGDCAPRAEEIERALRGK 286
>gi|296170502|ref|ZP_06852089.1| ribokinase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295894854|gb|EFG74576.1| ribokinase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=292
Score = 338 bits (868), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 208/286 (73%), Positives = 233/286 (82%), Gaps = 4/286 (1%)
Query 15 RVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFG 74
RVCVVGSVN+D++ VD LPRPGETVLA+SLT PGGKGANQAVAAARAGA+VQF G G
Sbjct 3 RVCVVGSVNLDVSLRVDTLPRPGETVLASSLTHAPGGKGANQAVAAARAGARVQFVGTIG 62
Query 75 DDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLT----P 130
DDPAA QLRAHL +N VGLD PGPSGTAI+VVDA+AENT++VAPGAN LT P
Sbjct 63 DDPAAGQLRAHLLSNGVGLDAIFEAPGPSGTAIVVVDANAENTIVVAPGANGRLTLDAPP 122
Query 131 VPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVV 190
V + +A ++LLTQLEIPV A+AAA A+SA AVV+VNASPAG DR++L DLAA+ADVV
Sbjct 123 VRNVIAGSEILLTQLEIPVRAAVAAAEHARSAGAVVIVNASPAGHDRAALADLAALADVV 182
Query 191 IANEHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAA 250
IANE EA WP P H V TLG RGARY GADG F VPAPTV VDTAGAGDVFAGVLA
Sbjct 183 IANEAEAGAWPWRPPHLVTTLGARGARYAGADGAFAVPAPTVAAVDTAGAGDVFAGVLAG 242
Query 251 NWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAAL 296
+WPR+PGSPA+RL ALRRACAAGALATLV G G+CAP + AIDAAL
Sbjct 243 SWPRDPGSPAQRLHALRRACAAGALATLVPGAGNCAPDSEAIDAAL 288
>gi|118463956|ref|YP_880970.1| kinase, pfkB family protein [Mycobacterium avium 104]
gi|118165243|gb|ABK66140.1| kinase, pfkB family protein [Mycobacterium avium 104]
Length=283
Score = 335 bits (858), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 196/282 (70%), Positives = 223/282 (80%), Gaps = 4/282 (1%)
Query 22 VNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQ 81
+N+DL+ VDALPRPGETVLA+SL + PGGKG NQAVAAARAGA+VQF GA GDD AA Q
Sbjct 1 MNLDLSLAVDALPRPGETVLASSLRQAPGGKGGNQAVAAARAGARVQFVGAVGDDAAAGQ 60
Query 82 LRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLT----PVPSAVAN 137
LRAHL+AN VGLD V +PGPSGTAI+VVDA+AENT++VAPGAN T + +A
Sbjct 61 LRAHLQANGVGLDGAVEIPGPSGTAIVVVDANAENTIVVAPGANGRFTLNDERARAVLAG 120
Query 138 CDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEA 197
CDV+LTQLEIPVATA+AAAR A+S AVV+VNASPAG+D SL +LAA ADVVI NE EA
Sbjct 121 CDVMLTQLEIPVATAVAAARHARSGGAVVVVNASPAGRDPDSLSELAAAADVVITNEEEA 180
Query 198 NDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPG 257
++WP P H V+TLG GARYVGADG + VP+P V VDT GAGDVFAGVLAANWP PG
Sbjct 181 SEWPWRPRHLVVTLGSHGARYVGADGEYSVPSPDVDAVDTTGAGDVFAGVLAANWPLEPG 240
Query 258 SPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRAN 299
SP +R ALRRACAAGALATLV G GDCAP A I+ ALR
Sbjct 241 SPDQRRLALRRACAAGALATLVPGAGDCAPRAEEIERALRGK 282
>gi|126436121|ref|YP_001071812.1| ribokinase-like domain-containing protein [Mycobacterium sp.
JLS]
gi|126235921|gb|ABN99321.1| PfkB domain protein [Mycobacterium sp. JLS]
Length=285
Score = 325 bits (832), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 182/289 (63%), Positives = 208/289 (72%), Gaps = 10/289 (3%)
Query 13 APRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGA 72
A RVCVVGSVN DL F V +LPRPG+TVLA+S+T +PGGKG NQA+AAARAG V A
Sbjct 3 AARVCVVGSVNADLRFAVPSLPRPGQTVLASSMTTSPGGKGGNQAIAAARAGGDVSLVAA 62
Query 73 FGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHL---- 128
GDDPAA QLRAHLRAN VGLD VTVPGPSG+A+++VDA+AEN ++VAPGANAHL
Sbjct 63 LGDDPAAGQLRAHLRANGVGLDGVVTVPGPSGSAVVIVDAAAENAIVVAPGANAHLSVAS 122
Query 129 TPVPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIAD 188
+ V A+A DV+L QLEIP+ TA AAR A+ A AVVMVNASPAG L L+ +AD
Sbjct 123 SAVREAIAGADVVLLQLEIPLHTANDAARVARDAGAVVMVNASPAGAPPHELLRLSEVAD 182
Query 189 VVIANEHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVL 248
VV+ N+ EA +W P H VIT G RGA Y+G F+VPAP V VDT GAGDVFAGVL
Sbjct 183 VVVVNQAEAGEWHWPVPHLVITRGARGASYLGDGERFDVPAPAVEAVDTTGAGDVFAGVL 242
Query 249 AANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALR 297
A +W ALRRAC AGALATLV G GDCAP A AID ALR
Sbjct 243 AVHWRSG------HENALRRACVAGALATLVPGAGDCAPTAEAIDDALR 285
>gi|108800505|ref|YP_640702.1| PfkB [Mycobacterium sp. MCS]
gi|119869644|ref|YP_939596.1| ribokinase-like domain-containing protein [Mycobacterium sp.
KMS]
gi|108770924|gb|ABG09646.1| PfkB [Mycobacterium sp. MCS]
gi|119695733|gb|ABL92806.1| PfkB domain protein [Mycobacterium sp. KMS]
Length=285
Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 181/289 (63%), Positives = 207/289 (72%), Gaps = 10/289 (3%)
Query 13 APRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGA 72
A RVCVVGSVN DL F V +LPRPG+TVLA+S+T +PGGKG NQA+AAARAG V A
Sbjct 3 AARVCVVGSVNADLRFAVPSLPRPGQTVLASSMTTSPGGKGGNQAIAAARAGGDVSLVAA 62
Query 73 FGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHL---- 128
GDDPAA QLRAHLRAN VGLD VTVPGPSG+A+++VDA+AEN ++VAPGANAHL
Sbjct 63 LGDDPAAGQLRAHLRANGVGLDGVVTVPGPSGSAVVIVDAAAENAIVVAPGANAHLSVAS 122
Query 129 TPVPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIAD 188
+ V A+A DV+L QLEIP+ TA AAR A+ A AVVMVNASPAG L L+ +AD
Sbjct 123 SAVREAIAGADVVLLQLEIPLHTANDAARVARDAGAVVMVNASPAGAPPHELLRLSEVAD 182
Query 189 VVIANEHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVL 248
VV+ N+ EA +W P H VIT G RGA Y+G F+VPAP V VDT GAGDVFAGVL
Sbjct 183 VVVVNQAEAGEWHWPVPHLVITRGARGASYLGDGERFDVPAPAVEAVDTTGAGDVFAGVL 242
Query 249 AANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALR 297
A +W ALRRAC AGALATLV G GDCAP A AID LR
Sbjct 243 AVHWRSG------HENALRRACVAGALATLVPGAGDCAPTAEAIDDTLR 285
>gi|333990118|ref|YP_004522732.1| ribokinase-like domain-containing protein [Mycobacterium sp.
JDM601]
gi|333486086|gb|AEF35478.1| ribokinase-like domain-containing protein [Mycobacterium sp.
JDM601]
Length=286
Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 169/295 (58%), Positives = 201/295 (69%), Gaps = 12/295 (4%)
Query 12 MAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSG 71
M ++CVVGSVN+D F V ALP PGETVL+++ + PGGKGANQAVAAARAGA V F G
Sbjct 1 MVAQLCVVGSVNLDTVFTVAALPAPGETVLSSAPSSHPGGKGANQAVAAARAGADVSFIG 60
Query 72 AFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLT-- 129
A G+D A +LR HLR N VG D TV GPSG+A++ VD + ENT++VAPGAN LT
Sbjct 61 AVGNDDAGLRLRRHLRDNGVGTDGLTTVAGPSGSAVVTVDPAGENTIVVAPGANGALTLD 120
Query 130 -PVPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIAD 188
+ V+L QLEIPV TA+ AARAA+ A V+VN SP G+D L +LA + D
Sbjct 121 SDQRELITKAQVVLLQLEIPVTTAITAARAARRVGATVIVNVSPVGED---LTELAGLID 177
Query 189 VVIANEHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVL 248
V + NE E+ + P H V+TLG RGARY GADG+ EVPAP V +DT+GAGDVFAGVL
Sbjct 178 VAVVNETESARFSHPVPHRVVTLGARGARYSGADGIVEVPAPVVAAIDTSGAGDVFAGVL 237
Query 249 AANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRANRHNG 303
AA WP + ALR ACAAGALATLVSG GDCAP A AI AAL + G
Sbjct 238 AAEWPSG------KAHALRLACAAGALATLVSGAGDCAPTAEAIRAALATGQPGG 286
>gi|118472840|ref|YP_888854.1| ribokinase [Mycobacterium smegmatis str. MC2 155]
gi|118174127|gb|ABK75023.1| ribokinase [Mycobacterium smegmatis str. MC2 155]
Length=286
Score = 251 bits (642), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 172/288 (60%), Positives = 197/288 (69%), Gaps = 10/288 (3%)
Query 13 APRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGA 72
A RVCVVGS+N DLTF V LPRPG+TVLA+SL PGGKG NQAVAAARAGA A
Sbjct 3 AARVCVVGSINADLTFTVANLPRPGQTVLASSLASAPGGKGGNQAVAAARAGAATSLVAA 62
Query 73 FGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLT--- 129
GDD AA LRAHLRAN V D V++ GPSG+A IVVDA+ EN ++VAPGANA L
Sbjct 63 VGDDAAAESLRAHLRANGVDEDAVVSLAGPSGSAAIVVDAAGENHIVVAPGANALLDVDA 122
Query 130 -PVPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIAD 188
+A+ + DV+L QLEI TA+AAA+ A+ A A+VM+NASP G L L+ + D
Sbjct 123 PAARAAIGSADVVLLQLEISPTTAIAAAQQARDAGALVMLNASPVGTAAHHLLALSHLTD 182
Query 189 VVIANEHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVL 248
VV+ NE EA +W P H VIT G RGA YV D F+VPA V VDT GAGDVFAGVL
Sbjct 183 VVVVNETEAAEWHWPVRHLVITRGARGASYVSDDERFDVPALRVRAVDTTGAGDVFAGVL 242
Query 249 AANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAAL 296
AA W PA AL+RACAAGALATLV G GDCAP+AA IDA L
Sbjct 243 AAGW------PAGHEHALQRACAAGALATLVRGAGDCAPSAADIDAVL 284
>gi|120404889|ref|YP_954718.1| ribokinase [Mycobacterium vanbaalenii PYR-1]
gi|119957707|gb|ABM14712.1| Ribokinase [Mycobacterium vanbaalenii PYR-1]
Length=286
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 178/297 (60%), Positives = 208/297 (71%), Gaps = 20/297 (6%)
Query 12 MAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSG 71
MA R+ VVGS N+DLTF V ALPRPGETVLA++L+ TPGGKG NQAVAAARAGAQVQ
Sbjct 1 MATRLSVVGSANVDLTFSVTALPRPGETVLASALSSTPGGKGGNQAVAAARAGAQVQLVA 60
Query 72 AFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLT-- 129
A G D AA QL+AHL+ANAVGLD VPGPSG+A I+VDA+ EN ++VAPGAN HL+
Sbjct 61 ALGTDAAAEQLKAHLKANAVGLDGVTAVPGPSGSAAILVDAAGENCIVVAPGANGHLSLS 120
Query 130 --PVPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIA 187
V VA+ DV+L LEIP+ TA+ AAR +SA A V++NASPA S+L DL A
Sbjct 121 SPAVREVVADSDVVLLSLEIPIDTAVTAARIGRSAGATVVLNASPASAQASALADL---A 177
Query 188 DVVIANEHEANDW-----PSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGD 242
DVV+ NE E++ W P P H VIT G RGA YVG + E PAP V VDT GAGD
Sbjct 178 DVVVVNETESDGWLDGDRPRVP-HLVITRGARGATYVG-ETRLEFPAPAVEAVDTTGAGD 235
Query 243 VFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRAN 299
VFAGVLAANWPR AL RACAAGAL+TLV G GDCAP + A++ L A+
Sbjct 236 VFAGVLAANWPRGAD------YALARACAAGALSTLVHGAGDCAPYSEAVEDVLEAS 286
>gi|145223230|ref|YP_001133908.1| ribokinase [Mycobacterium gilvum PYR-GCK]
gi|145215716|gb|ABP45120.1| Ribokinase [Mycobacterium gilvum PYR-GCK]
Length=286
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 178/295 (61%), Positives = 204/295 (70%), Gaps = 18/295 (6%)
Query 12 MAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSG 71
MA R+CVVGSVN DLTF VDALPRPGETVLA +L PGGKG NQAVAAARAGA VQ
Sbjct 1 MATRLCVVGSVNADLTFTVDALPRPGETVLADALACAPGGKGGNQAVAAARAGADVQLVA 60
Query 72 AFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLT-- 129
A G D +A QLR HLRAN+VGLD V VPGPSGTA I+VDA AEN ++VAPGANAHL+
Sbjct 61 ALGTDASAEQLRDHLRANSVGLDAVVAVPGPSGTAAILVDAGAENCIVVAPGANAHLSLA 120
Query 130 --PVPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIA 187
V SA+A+ DV+L LEIP+ TA+AAARA + A A VM+NASP ++ + LAA
Sbjct 121 SPVVRSAIADADVVLLSLEIPIDTAVAAARAGRYAGATVMLNASPTPREVGT---LAAHV 177
Query 188 DVVIANEHEANDWPSPPT----HFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDV 243
DVV+ NE EA+ W H V+T G RGA VG EVPAP V VDT GAGDV
Sbjct 178 DVVVVNETEADAWRDGDRILVPHLVVTHGARGATCVG-QCHLEVPAPAVEAVDTTGAGDV 236
Query 244 FAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRA 298
FAGVLAANW + A+ RACAAGALATLV G GDCAP+ A++ L A
Sbjct 237 FAGVLAANWEQGVE------FAMARACAAGALATLVPGAGDCAPSREAVEDVLDA 285
>gi|315443688|ref|YP_004076567.1| sugar kinase, ribokinase [Mycobacterium sp. Spyr1]
gi|315261991|gb|ADT98732.1| sugar kinase, ribokinase [Mycobacterium sp. Spyr1]
Length=286
Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 170/295 (58%), Positives = 195/295 (67%), Gaps = 18/295 (6%)
Query 12 MAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSG 71
MA R+CVVGSVN DLTF VDALPRPGETVLA +L PGGKG NQAVAAARAGA VQ
Sbjct 1 MATRLCVVGSVNADLTFTVDALPRPGETVLADALACAPGGKGGNQAVAAARAGADVQLVA 60
Query 72 AFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLT-- 129
A G D +A QLR HLRAN+VGLD V VPGPSGTA I+VDA AEN ++VAPGANAHL+
Sbjct 61 ALGTDASAEQLRDHLRANSVGLDAVVAVPGPSGTAAILVDAGAENCIVVAPGANAHLSLA 120
Query 130 --PVPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIA 187
V SA+A+ DV+L LEIP+ TA+AAARA + A A VM+NASP ++ + LAA
Sbjct 121 SPVVRSAIADADVVLLSLEIPIDTAVAAARAGRYAGATVMLNASPTPREVGT---LAAHV 177
Query 188 DVVIANEHEANDWPSPPT----HFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDV 243
DVV+ NE EA+ W H V+T G GA VG EVPAP V VDT GAGDV
Sbjct 178 DVVVVNETEADAWRDGDRILVPHLVVTHGACGATCVG-QCHLEVPAPAVEAVDTTGAGDV 236
Query 244 FAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRA 298
FAGVLAANW + R A ATLV G GDCAP+ A++ L A
Sbjct 237 FAGVLAANWEQGVEFAMARACAAGAL------ATLVPGAGDCAPSREAVEDVLDA 285
>gi|169628707|ref|YP_001702356.1| ribokinase RbsK [Mycobacterium abscessus ATCC 19977]
gi|169240674|emb|CAM61702.1| Probable ribokinase RbsK [Mycobacterium abscessus]
Length=274
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 150/280 (54%), Positives = 173/280 (62%), Gaps = 10/280 (3%)
Query 24 MDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLR 83
MDLT V+ LP PG TVLA S PGGKGANQAVAAARAGA VQF GA G D AA LR
Sbjct 1 MDLTLRVEELPAPGATVLATSAMPAPGGKGANQAVAAARAGASVQFIGAVGSDGAAPMLR 60
Query 84 AHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVPSA----VANCD 139
+HL N VGLD V V GPSG A I V+ S EN ++VAPGAN T + + D
Sbjct 61 SHLADNNVGLDGLVEVDGPSGMATITVEDSGENCIVVAPGANTTFTLDEKVHKDIICSHD 120
Query 140 VLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEAND 199
VLL QLEIPV AL AAR A A ++NASP + L +LA A VV+ NE EA
Sbjct 121 VLLCQLEIPVRVALTAARWAAEAGKQFVLNASPVPERSPDLAELAFRASVVVVNETEARS 180
Query 200 WPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSP 259
W P H V TLG G+RY G VP+ V P+DT GAGDVFAGVLAA WP+ +
Sbjct 181 WLYPSRHLVTTLGDEGSRYRSPQGQITVPSYPVRPLDTTGAGDVFAGVLAAWWPQGAET- 239
Query 260 AERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRAN 299
ALRRA AGALATL +G G+CAP A I+ +L+ +
Sbjct 240 -----ALRRANVAGALATLRAGAGNCAPTGARIELSLKGS 274
>gi|317508661|ref|ZP_07966317.1| ribokinase [Segniliparus rugosus ATCC BAA-974]
gi|316253064|gb|EFV12478.1| ribokinase [Segniliparus rugosus ATCC BAA-974]
Length=283
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 149/289 (52%), Positives = 178/289 (62%), Gaps = 13/289 (4%)
Query 18 VVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDP 77
+ GSVN D V P PGETVLA SL R PGGKGANQAVAAARAGA VQF G+FG+D
Sbjct 1 MFGSVNQDFVLRVQRPPHPGETVLARSLERLPGGKGANQAVAAARAGAVVQFIGSFGEDE 60
Query 78 AAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHL---TPVPSA 134
A LR LR VGL ++TVPGP+G A+I+VD + EN V+V PGAN L S
Sbjct 61 VGAVLRGRLRREKVGLTGSMTVPGPNGVAVILVDDTGENVVIVPPGANDKLALTEAAESV 120
Query 135 VANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIANE 194
+ D+LL QLE+P + A RA++ A + +VN SP S +L +ADV++ NE
Sbjct 121 LTRVDMLLCQLEVPFDAIVDALRASREAGVLTIVNFSPVPPG-SFPSELLELADVLVVNE 179
Query 195 HEANDWPSPP---THFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAAN 251
EA + H V TLG RGARY G G VP+P V PVDT GAGDVFAGVLAA+
Sbjct 180 GEARELGERLRGVRHVVTTLGARGARYQGPRGEVNVPSPKVQPVDTTGAGDVFAGVLAAS 239
Query 252 WPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRANR 300
W P +ALRRA AG+LATLV G G+CAP + ID AL R
Sbjct 240 WHLGPE------QALRRAAVAGSLATLVPGAGNCAPTSEEIDQALDGLR 282
>gi|296393844|ref|YP_003658728.1| PfkB domain-containing protein [Segniliparus rotundus DSM 44985]
gi|296180991|gb|ADG97897.1| PfkB domain protein [Segniliparus rotundus DSM 44985]
Length=298
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 153/299 (52%), Positives = 189/299 (64%), Gaps = 17/299 (5%)
Query 11 PMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFS 70
P PRV V GSVN DL V P PGETV+A S+ R PGGKGANQAVAAARAGA+VQF
Sbjct 8 PAVPRVAVFGSVNQDLVLRVQRPPHPGETVMAKSVERLPGGKGANQAVAAARAGAKVQFI 67
Query 71 GAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTP 130
G+FG+D + LR LR VGL ++ VPGP+G A+I+VD + EN ++V PGAN LT
Sbjct 68 GSFGEDEVGSVLRGRLRRERVGLTGSMAVPGPNGIAVILVDDTGENMIIVPPGANDKLTL 127
Query 131 V---PSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNAS--PAGQDRSSLQDLAA 185
S + D++L QLE+P + + A R +++A + +VN S PAG QD+
Sbjct 128 TEAAESVLTRVDIILCQLEVPFESVVDALRVSRAAGVLTIVNFSPVPAG---PFPQDILE 184
Query 186 IADVVIANEHEANDWPSPPT---HFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGD 242
+ADV+I NE E D H V TLG RGARY G G +VP+P V PVDT GAGD
Sbjct 185 LADVLIVNEGEGRDLGDRINVVPHVVTTLGARGARYRGPLGEVQVPSPKVNPVDTTGAGD 244
Query 243 VFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRANRH 301
VFAGVL+A+W P +A+RRA AGALATLVSG G+CAP AA ID A + R
Sbjct 245 VFAGVLSASWHLGPE------KAVRRAAVAGALATLVSGAGNCAPTAAKIDEAAQKARQ 297
>gi|226307269|ref|YP_002767229.1| ribokinase [Rhodococcus erythropolis PR4]
gi|226186386|dbj|BAH34490.1| probable ribokinase [Rhodococcus erythropolis PR4]
Length=288
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/291 (42%), Positives = 158/291 (55%), Gaps = 16/291 (5%)
Query 14 PRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAF 73
PR+ VVGS+NMDLT V P PGET+L + GGKG+NQA+AAA+AG V F GA
Sbjct 4 PRIVVVGSINMDLTTSVARFPAPGETLLGTAFATAAGGKGSNQAIAAAKAGGDVSFIGAV 63
Query 74 GDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVPS 133
GDD QLR L+ V +V GPSG A I V AEN ++V PGAN+ +T +
Sbjct 64 GDDGFGTQLRETLQGAGVDTALLRSVDGPSGVAAITVSEDAENNIIVVPGANSSITSLTE 123
Query 134 ----AVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADV 189
A++ D+LL QLEIPV T AAA A + V++N SP + + L D D+
Sbjct 124 ADLDAISRADILLCQLEIPVETVTAAAEHAHANGTTVILNPSPVQELPAPLIDA---VDI 180
Query 190 VIANEHEANDWPSPP---THFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAG 246
+I N+ E+ + + V TLG GA D +P VTPVDT GAGD F G
Sbjct 181 LIVNQTESEQLAAVTGRVAYLVTTLGAGGADLKTGDETVHADSPAVTPVDTTGAGDAFTG 240
Query 247 VLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALR 297
A W ++ + RAL+ A AG+LAT V G +P A I+ L+
Sbjct 241 AFAVEWVQD------QDRALQFAATAGSLATTVRGASVSSPTRAVIEKVLK 285
>gi|229493172|ref|ZP_04386964.1| ribokinase [Rhodococcus erythropolis SK121]
gi|229319903|gb|EEN85732.1| ribokinase [Rhodococcus erythropolis SK121]
Length=293
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/295 (43%), Positives = 159/295 (54%), Gaps = 18/295 (6%)
Query 14 PRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAF 73
PR+ VVGS+NMDLT V P PGET+L + GGKG+NQA+AAA+AG V F GA
Sbjct 4 PRIVVVGSINMDLTTSVSRFPAPGETLLGTAFATAAGGKGSNQAIAAAKAGGDVSFVGAV 63
Query 74 GDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVPS 133
GDD QLR L+ V +V GPSG A I V AEN ++V PGAN+ +T +
Sbjct 64 GDDGFGTQLRETLQDAGVDTALLRSVDGPSGVAAITVSEDAENNIIVVPGANSSVTSLSE 123
Query 134 ----AVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADV 189
A+A+ DVLL QLEIPV T AAA A + V++N SP + L D D+
Sbjct 124 ADLDAIAHADVLLCQLEIPVETVRAAAEHAHANGTTVILNPSPVQELPDPLID---AVDI 180
Query 190 VIANEHEANDWPSPP---THFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAG 246
+I N+ E+ + + V TLG GA + +P VTPVDT GAGD F G
Sbjct 181 LIVNQTESEQLAAVTGRVRYLVTTLGAGGADLRSGEETIHADSPAVTPVDTTGAGDAFTG 240
Query 247 VLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRANRH 301
A W + + RAL+ A AG+LAT V G +P AAI+ L NR
Sbjct 241 AFAVEWVQG------QDRALQFAATAGSLATTVRGASVSSPTRAAIEKVL--NRQ 287
>gi|333918805|ref|YP_004492386.1| ribokinase [Amycolicicoccus subflavus DQS3-9A1]
gi|333481026|gb|AEF39586.1| Ribokinase [Amycolicicoccus subflavus DQS3-9A1]
Length=289
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/275 (46%), Positives = 146/275 (54%), Gaps = 17/275 (6%)
Query 15 RVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFG 74
R+ V+GS+NMDL LP PGETVL S PGGKGANQA+AAAR GA V F GA G
Sbjct 5 RIAVLGSINMDLVVRAQRLPAPGETVLGESRREIPGGKGANQAIAAARMGAHVWFLGAVG 64
Query 75 DDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAH---LTPV 131
D A LR HL + V T GPSG A I V+ EN ++V PGAN LTP
Sbjct 65 TDSYAQPLREHLLSAGVHTSELRTTAGPSGFASITVNQEGENAIVVVPGANQSLHGLTPA 124
Query 132 PSA-VANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVV 190
A + +CDV+L QLE+P+ AA A A VM+N SP Q + L ADVV
Sbjct 125 DRARIRDCDVVLLQLELPIDVVAEAAEFACMAGTTVMLNPSPYQQ---LPERLLTHADVV 181
Query 191 IANEHEANDWPSPP---THFVITLGVRGARYVGADG-VFEVPAPTVTPVDTAGAGDVFAG 246
I NE EA +IT G RGA + G G F+VPA V +DT GAGD FAG
Sbjct 182 ILNEIEAEQLGRDQAGLRQLLITRGRRGAHFRGRGGESFDVPALGVDVIDTTGAGDAFAG 241
Query 247 VLAANWPRNPGSPAERLRALRRACAAGALATLVSG 281
AA W R A+ AC AGALA G
Sbjct 242 ACAALWHRGASV------AVPWACTAGALAVTREG 270
>gi|226360439|ref|YP_002778217.1| ribokinase [Rhodococcus opacus B4]
gi|226238924|dbj|BAH49272.1| ribokinase [Rhodococcus opacus B4]
Length=288
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 142/293 (49%), Positives = 171/293 (59%), Gaps = 18/293 (6%)
Query 13 APRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGA 72
APRV VVGSVNMDL + LP PGET+L ++ TPGGKGANQA+AAARAG V F GA
Sbjct 3 APRVAVVGSVNMDLLTATERLPGPGETILGSAFAATPGGKGANQAIAAARAGGAVTFIGA 62
Query 73 FGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGAN---AHLT 129
G D A LR L V V GPSG A I VDA+ EN+++V PGAN A LT
Sbjct 63 VGSDVFALDLRQALVDAEVDTRYLREVDGPSGIAAITVDAAGENSIVVVPGANSTVADLT 122
Query 130 PVP-SAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIAD 188
P +AVA+ DVLL QLEIP+ T +AAA A + VVMVN SPA ++ +L + D
Sbjct 123 PAELAAVADADVLLCQLEIPLGTVVAAATHAAAHGTVVMVNPSPA---QTLPPELVELID 179
Query 189 VVIANEHEANDWPSPPT----HFVITLGVRGARYVGADG-VFEVPAPTVTPVDTAGAGDV 243
V++ N+ EA + T H V TLG GA Y G DG +P V VDT GAGD
Sbjct 180 VLLVNQTEAAQLGAEVTGAVSHVVTTLGSSGADYAGRDGAALHADSPVVEVVDTTGAGDA 239
Query 244 FAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAAL 296
FAG L+ +W P + A+ AC AGALAT G +P A I+AAL
Sbjct 240 FAGALSVSWRGGPET------AVPFACTAGALATTRRGASTSSPTLAEIEAAL 286
>gi|54023337|ref|YP_117579.1| putative ribokinase [Nocardia farcinica IFM 10152]
gi|54014845|dbj|BAD56215.1| putative ribokinase [Nocardia farcinica IFM 10152]
Length=287
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 136/291 (47%), Positives = 160/291 (55%), Gaps = 17/291 (5%)
Query 14 PRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAF 73
P + V+GS+NMDL P PGETVL + PGGKGANQAVAA R+G +V+F GA
Sbjct 4 PVIAVLGSINMDLVTTTARRPAPGETVLGSGFDTVPGGKGANQAVAARRSGGRVEFLGAV 63
Query 74 GDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVPS 133
G D A QLR L + VG TVPGPSG A IVVD S EN+++V GANA +T +
Sbjct 64 GTDVFAPQLRGALESVGVGTAGLRTVPGPSGVASIVVDESGENSIIVVGGANAAMTALRE 123
Query 134 A----VANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADV 189
+A DVL+ QLEIPV T A R A++ V++N SPA QD L A DV
Sbjct 124 TDRAMIAAADVLVCQLEIPVPTVAAGLRHARANGTTVLLNPSPA-QDLPP--QLWADVDV 180
Query 190 VIANEHEANDWPSPPT---HFVITLGVRGARYVGADGV-FEVPAPTVTPVDTAGAGDVFA 245
+ N E + H V+TLG GARY G DG VP V VDT GAGD F
Sbjct 181 AVVNRGEERQLGAVLDRVPHVVVTLGGAGARYRGPDGAELAVPGVPVEVVDTTGAGDAFT 240
Query 246 GVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAAL 296
G LA W P + ALR ACAAGALAT G P AAI+ L
Sbjct 241 GALAVTWRHGPAA------ALRWACAAGALATTRLGASASIPERAAIEDLL 285
>gi|312140332|ref|YP_004007668.1| ribokinase [Rhodococcus equi 103S]
gi|311889671|emb|CBH48988.1| ribokinase [Rhodococcus equi 103S]
Length=290
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 139/288 (49%), Positives = 168/288 (59%), Gaps = 20/288 (6%)
Query 16 VCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGD 75
V VVGS+NMDL +P PGETVL S TPGGKG+NQA+AAA+AGA V F GA GD
Sbjct 6 VVVVGSINMDLVARTARMPAPGETVLGTSFATTPGGKGSNQAIAAAKAGADVAFVGAVGD 65
Query 76 DPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVP--- 132
D A +LR L V +R VPGPSG A I VD+S +N+++V PGAN+ + +
Sbjct 66 DTFALELRQTLVDAEVDAERLREVPGPSGVAAITVDSSGQNSIIVVPGANSRVVDLTHDE 125
Query 133 -SAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQD-LAAIADVV 190
+A+A+ DVLL QLEIP+ T AAAR A + VV++N SPA SL D L DV+
Sbjct 126 LAAIADADVLLCQLEIPLDTVTAAARHAAAHGTVVILNPSPA----QSLPDGLVDAVDVL 181
Query 191 IANEHE----ANDWPSPPTHFVITLGVRGARYVGADG-VFEVPAPTVTPVDTAGAGDVFA 245
+ NE E D + H V TLG GARY G G V AP+V VDT GAGD FA
Sbjct 182 VVNETEERQLGEDALTRVQHVVTTLGADGARYRGPGGEQLRVAAPSVDAVDTTGAGDAFA 241
Query 246 GVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAID 293
G LA+ W R P L AL ACAAGAL G +P A I+
Sbjct 242 GALASAWSRGP------LAALTFACAAGALTATRPGASAASPTRAEIE 283
>gi|111018313|ref|YP_701285.1| ribokinase [Rhodococcus jostii RHA1]
gi|110817843|gb|ABG93127.1| ribokinase [Rhodococcus jostii RHA1]
Length=288
Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 142/293 (49%), Positives = 170/293 (59%), Gaps = 18/293 (6%)
Query 13 APRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGA 72
APRV VVGS+NMDL + LP PGET+L + TPGGKGANQA+AAARAG V F GA
Sbjct 3 APRVAVVGSINMDLLTATERLPAPGETILGTAFAATPGGKGANQAIAAARAGGDVTFIGA 62
Query 73 FGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGAN---AHLT 129
G D A LR L V V GPSG A I VDA+ EN+++V PGAN A LT
Sbjct 63 VGSDVFALDLRQALVDAEVDTRYLREVDGPSGIAAITVDAAGENSIVVVPGANSTVADLT 122
Query 130 PVP-SAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIAD 188
P +AVA+ DVLL QLEIP+ T LAAA A + VVM+N SPA ++ +L + D
Sbjct 123 PTELAAVADADVLLCQLEIPLRTVLAAAAHATAHGTVVMLNPSPA---QALPDELVKLVD 179
Query 189 VVIANEHEANDWPSPPT----HFVITLGVRGARYVGADG-VFEVPAPTVTPVDTAGAGDV 243
V++ N+ EA + T H V TLG GA Y G+DG + V VDT GAGD
Sbjct 180 VLLVNQTEAAQLGAEVTGAISHVVTTLGSSGADYAGSDGTTLHADSSEVEVVDTTGAGDA 239
Query 244 FAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAAL 296
FAG LA +W R P A+ AC AGALAT G +P A I+AAL
Sbjct 240 FAGALAVSWRRGPA------IAVPFACTAGALATTRRGASTSSPTLAEIEAAL 286
>gi|325677092|ref|ZP_08156761.1| ribokinase [Rhodococcus equi ATCC 33707]
gi|325552077|gb|EGD21770.1| ribokinase [Rhodococcus equi ATCC 33707]
Length=290
Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 139/288 (49%), Positives = 168/288 (59%), Gaps = 20/288 (6%)
Query 16 VCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGD 75
V VVGS+NMDL +P PGETVL S TPGGKG+NQA+AAA+AGA V F GA GD
Sbjct 6 VVVVGSINMDLVARAARMPAPGETVLGTSFATTPGGKGSNQAIAAAKAGADVAFVGAVGD 65
Query 76 DPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVP--- 132
D A +LR L V +R VPGPSG A I VD+S +N+++V PGAN+ + +
Sbjct 66 DTFALELRQTLVDAEVDAERLREVPGPSGVAAITVDSSGQNSIIVVPGANSRVVDLTHDE 125
Query 133 -SAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQD-LAAIADVV 190
+A+A+ DVLL QLEIP+ T AAAR A + VV++N SPA SL D L DV+
Sbjct 126 LAAIADADVLLCQLEIPLDTVTAAARHAAAHGTVVILNPSPA----QSLPDGLVDAVDVL 181
Query 191 IANEHE----ANDWPSPPTHFVITLGVRGARYVGADG-VFEVPAPTVTPVDTAGAGDVFA 245
+ NE E D + H V TLG GARY G G V AP+V VDT GAGD FA
Sbjct 182 VVNETEERQLGEDALTRVQHVVTTLGADGARYRGPGGEQLRVAAPSVDAVDTTGAGDAFA 241
Query 246 GVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAID 293
G LA+ W R P L AL ACAAGAL G +P A I+
Sbjct 242 GALASAWSRGP------LAALTFACAAGALTATRPGASAASPTRAEIE 283
>gi|34498475|ref|NP_902690.1| ribokinase [Chromobacterium violaceum ATCC 12472]
gi|34104330|gb|AAQ60689.1| ribokinase [Chromobacterium violaceum ATCC 12472]
Length=296
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/301 (41%), Positives = 148/301 (50%), Gaps = 28/301 (9%)
Query 15 RVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFG 74
RV VVGS+NMDL +P+ GET+L PGGKGANQAVAAAR GA+V G G
Sbjct 3 RVLVVGSINMDLVVTARRMPKLGETLLGDGFATHPGGKGANQAVAAARLGAEVALLGCVG 62
Query 75 DDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTP---- 130
DD LRAHL V TVPGP+G A I V + +N +LV PGAN LTP
Sbjct 63 DDAFGRDLRAHLEREGVDCRGVATVPGPTGIAAITV-SGGDNAILVVPGANHQLTPAHLD 121
Query 131 -VPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADV 189
A + DV+LTQLEIP+A AA A +++N +PA ++L +
Sbjct 122 AAEQAFIDADVVLTQLEIPLAAVRRAAELAARHKKPLLLNPAPA---VPLPEELLQRVTL 178
Query 190 VIANEHEA--------NDW----PSPPTHFVITLGVRGARYVGADGVF-EVPAPTVTPVD 236
+ NEHE DW P V+T G GA + A G P V VD
Sbjct 179 LTPNEHEFLTMLAQPDADWRALLAERPGKLVMTHGKHGAYFALARGQLRHQPGFEVQAVD 238
Query 237 TAGAGDVFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAAL 296
+ GAGD F G LAA P A+RRA AAGAL+ G P A ++A L
Sbjct 239 STGAGDTFNGALAAFLPLGLEE------AVRRANAAGALSVTRPGAQGGMPTLAELEAFL 292
Query 297 R 297
Sbjct 293 E 293
>gi|296139276|ref|YP_003646519.1| PfkB domain-containing protein [Tsukamurella paurometabola DSM
20162]
gi|296027410|gb|ADG78180.1| PfkB domain protein [Tsukamurella paurometabola DSM 20162]
Length=286
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/254 (47%), Positives = 147/254 (58%), Gaps = 12/254 (4%)
Query 16 VCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGD 75
V VVGS+N+D V + PRPGET+ S++ GGKGANQA +AAR+GA+ F GA GD
Sbjct 4 VVVVGSINLDAVTVCERFPRPGETIAGVSVSFGQGGKGANQARSAARSGAETVFVGAVGD 63
Query 76 DPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVPS-- 133
D AAA + L A V + +PG +G A + VD S EN ++V PGANA +T +
Sbjct 64 DAAAATVLGSLTAAGVDISPVRRIPGSTGFANVTVDGSGENHIIVVPGANAEVTLDDTGR 123
Query 134 -AVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIA 192
A+A DVLL QLEIP+ L AAR A++ V++N SP ++ +L A+ D VI
Sbjct 124 AAIAAADVLLLQLEIPLRVVLDAARIARANATTVLLNPSPV---QALPDELVALLDGVIV 180
Query 193 NEHEANDWPSPPT---HFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLA 249
N EA H + TLG GAR G +G E P TV VDT GAGD FAG LA
Sbjct 181 NRDEARTLAGSVRRVPHVITTLGGAGARATGPEGTVESPGLTVDVVDTTGAGDAFAGALA 240
Query 250 ANWPRNPGSPAERL 263
ANW PAERL
Sbjct 241 ANWTL---PPAERL 251
>gi|325291798|ref|YP_004277662.1| ribokinase [Agrobacterium sp. H13-3]
gi|325059651|gb|ADY63342.1| ribokinase [Agrobacterium sp. H13-3]
Length=299
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 113/303 (38%), Positives = 155/303 (52%), Gaps = 31/303 (10%)
Query 16 VCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGD 75
+ V GS+NMDL LP+PGETV + + GGKGANQA+AA RAGA V+ +GA GD
Sbjct 2 ITVFGSINMDLVATAKRLPKPGETVTGETFSTAAGGKGANQALAARRAGATVKMAGATGD 61
Query 76 DPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLT-----P 130
D AA LR L T PGP+GTA+I++ EN + V P AN ++
Sbjct 62 DTFAAPALTLLRDAGTDLSLVKTAPGPTGTAVILIGEGGENMISVIPAANGEVSASDAAR 121
Query 131 VPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVV 190
+ +A D+L+ Q E+P + AA AA++ ++N +P D LA++AD+V
Sbjct 122 AVAEMAAGDILMLQFEVPAPSIEAALTAAKAKRITTIINTAPLTADGPR---LASLADIV 178
Query 191 IANEHE---------------ANDWPSPPTH----FVITLGVRGARYVGADGVFEVPAPT 231
IANE E N+ S ++TLG G + VF+
Sbjct 179 IANETEFELLIGKNGLSASERENELKSLHEQTGQTLIVTLGADGVIAIRNGKVFKASGLK 238
Query 232 VTPVDTAGAGDVFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAA 291
+ PVDT GAGD F G LAA+ + G E +AL+RA AG+LA +G P AA
Sbjct 239 IEPVDTVGAGDTFCGYLAASL--DQGMDFE--KALKRAAVAGSLACTRAGAQPSIPVAAE 294
Query 292 IDA 294
+DA
Sbjct 295 VDA 297
>gi|302865741|ref|YP_003834378.1| PfkB domain-containing protein [Micromonospora aurantiaca ATCC
27029]
gi|302568600|gb|ADL44802.1| PfkB domain protein [Micromonospora aurantiaca ATCC 27029]
Length=298
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/254 (47%), Positives = 142/254 (56%), Gaps = 19/254 (7%)
Query 15 RVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFG 74
R+ VVGS NMDL + ALPRPGETVL PGGKGANQAVAA RAGA F GA G
Sbjct 5 RIAVVGSANMDLVGIGAALPRPGETVLGDDFVMLPGGKGANQAVAAVRAGASCVFLGAIG 64
Query 75 DDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVP-- 132
D LRA + A V D V GPSG A+++V + EN +LV PGANA T +
Sbjct 65 SDSFGVTLRARMTAAGVDTDHLRVVYGPSGVALVMVGGAGENAILVTPGANAAFTSLTAG 124
Query 133 --SAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVV 190
SAV + DVL+ QLE+PV T AA AA+SA V++NA+PA RS +L A D++
Sbjct 125 ELSAVRDADVLVAQLEVPVETVTEAALAARSAGTRVVLNAAPA---RSVPAELLAATDLL 181
Query 191 IANEHEAN-------DWPSPPTHF----VITLGVRGARYVGADG-VFEVPAPTVTPVDTA 238
+ NE EA D P+ V+TLG GA YV D VPA V VD+
Sbjct 182 VVNEPEAQALTGRGRDEPAALLDLVPRAVLTLGGDGAWYVDRDRPPTHVPAVPVDVVDST 241
Query 239 GAGDVFAGVLAANW 252
AGD F LA W
Sbjct 242 TAGDAFTAALAVAW 255
>gi|338824749|gb|EGP58716.1| ribokinase [Agrobacterium tumefaciens F2]
Length=299
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/303 (38%), Positives = 151/303 (50%), Gaps = 31/303 (10%)
Query 16 VCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGD 75
+ V GS+NMDL LP+PGETV S GGKGANQA+AA RAGA V+ +GA GD
Sbjct 2 ITVFGSINMDLVATAKRLPKPGETVTGESFATAAGGKGANQALAARRAGATVKMAGAAGD 61
Query 76 DPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVPSAV 135
D AA LR L T PGP+GTA+I++ EN + V P AN ++ +A
Sbjct 62 DTFAAPALTLLREAGTDLSLVKTAPGPTGTAMILIGEGGENMISVIPAANGEVSTADAAK 121
Query 136 ANC-----DVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVV 190
A D+L+ Q E+P AA AA++ ++N +P D L A +AD+V
Sbjct 122 AVAEMSAGDILMLQFEVPAPAIEAALTAAKAKRITTVINTAPLTADGPRL---AGLADIV 178
Query 191 IANEHE-------------ANDWPSPPTH------FVITLGVRGARYVGADGVFEVPAPT 231
IANE E + H ++TLG G + +F+
Sbjct 179 IANETEFELLIGKSELSGSERENEIKALHDKTGQTLIVTLGADGVVAIRNGKIFKASGLK 238
Query 232 VTPVDTAGAGDVFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAA 291
+ PVDT GAGD F G LAA+ + G E +AL+RA AG+LA +G P AA
Sbjct 239 IEPVDTVGAGDTFCGYLAASL--DQGMDFE--KALKRAAVAGSLACTRAGAQPSIPVAAE 294
Query 292 IDA 294
+DA
Sbjct 295 VDA 297
>gi|15807723|ref|NP_285378.1| ribokinase [Deinococcus radiodurans R1]
gi|6460552|gb|AAF12258.1|AE001862_84 ribokinase [Deinococcus radiodurans R1]
Length=300
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 134/299 (45%), Positives = 156/299 (53%), Gaps = 25/299 (8%)
Query 14 PRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAF 73
PRV VVGS N+D + LP PGETVL S T PGGKGANQAVA ARAG V F GA
Sbjct 10 PRVLVVGSANLDFVTRLSHLPAPGETVLGESYTTAPGGKGANQAVACARAGGAVAFCGAL 69
Query 74 GDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTP--V 131
G DP A L A LR + V D TV P+G A I V + EN + VA GAN L P +
Sbjct 70 GTDPFAEPLLASLRESGV-QDWTVRASTPTGAAFISVSEAGENCIAVASGANGTLRPEQL 128
Query 132 PSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVI 191
P + L+ QLEIP+ T AAA+AA+ A A V++NA+PA R+ +L + DV+I
Sbjct 129 PP-LTGVGWLVLQLEIPLETVQAAAQAAREAGAQVVLNAAPA---RTLPPELLRLVDVLI 184
Query 192 ANEHE------ANDW--------PSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDT 237
NE E A D S P V+TLG RG + D E+PA V DT
Sbjct 185 VNEGELRTLIGATDLRAGVRQAQASGPRTVVVTLGERGCLALSGDDWTELPALPVPVRDT 244
Query 238 AGAGDVFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAAL 296
GAGD F GVL A R G P ALR A A ALA G P I A L
Sbjct 245 TGAGDTFVGVLVAALSR--GEPFA--AALRWAVAGSALACTREGAQPAMPGREEIQANL 299
>gi|297199008|ref|ZP_06916405.1| ribokinase [Streptomyces sviceus ATCC 29083]
gi|297147259|gb|EFH28548.1| ribokinase [Streptomyces sviceus ATCC 29083]
Length=297
Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/253 (43%), Positives = 135/253 (54%), Gaps = 21/253 (8%)
Query 15 RVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFG 74
+ V+GS NMDL V+ PR GETV PGGKGANQA+AAAR+GA V GA G
Sbjct 3 HIAVLGSTNMDLVVYVEQAPRRGETVTGRDFRTIPGGKGANQAIAAARSGATVSMIGAVG 62
Query 75 DDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANA---HLTPV 131
DD +LR+ L + V D TV GPSGTA IVVD N ++V PGAN L P
Sbjct 63 DDGFGTRLRSTLEHSGVTTDHLRTVEGPSGTAHIVVDDEGGNAIVVIPGANGTVDRLVPG 122
Query 132 PSA-VANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVV 190
+A+ D LL QLEIP+A LA AR A++ ++ +P + +L A D++
Sbjct 123 DEGLIASADALLLQLEIPLAAVLAGARTARAHGVRTILTPAPV---QPLPPELLAATDLL 179
Query 191 IANEHEANDWPSPPTHF-------------VITLGVRGARYVGADGV-FEVPAPTVTPVD 236
+ NEHEA F VITLG G+ Y+ D VPAP VT VD
Sbjct 180 VPNEHEAATLTGLADPFAAGAALLDRVPRVVITLGAAGSVYLTRDAEPLAVPAPRVTAVD 239
Query 237 TAGAGDVFAGVLA 249
+ GAGD + G LA
Sbjct 240 STGAGDTYVGALA 252
>gi|227529897|ref|ZP_03959946.1| ribokinase [Lactobacillus vaginalis ATCC 49540]
gi|227350201|gb|EEJ40492.1| ribokinase [Lactobacillus vaginalis ATCC 49540]
Length=306
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/311 (36%), Positives = 157/311 (51%), Gaps = 32/311 (10%)
Query 12 MAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSG 71
M RV ++GS+N+D + V P+PGET+ + PGGKGANQAVAAAR+GA+V F G
Sbjct 1 MVNRVMILGSINVDSIYQVTRFPQPGETIAVKQKSYAPGGKGANQAVAAARSGAKVSFVG 60
Query 72 AFGDDPAAAQLRAHLRANAVGLDRTVTVP-GPSGTAIIVVDASAENTVLVAPGAN----- 125
A G D ++ L N V R P +G+A+I VD + +N ++V GAN
Sbjct 61 AVGADNDGQEMVKTLAENNVDTSRIAVDPDNGTGSAVITVDENGQNDIMVYGGANQAMSV 120
Query 126 AHLTPVPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAA 185
A L + +A D ++ QLE P LAA + A+ + + ++N +PA + L +L
Sbjct 121 AQLNDLEQELAGTDFIVAQLETPQEVTLAAFKLARQQNVITILNPAPATE---LLPELLE 177
Query 186 IADVVIANEHEA--------NDWPSP-----------PTHFVITLGVRGARYVGADGVF- 225
D++I NE E+ ND PS + +ITLG +G YV ADG
Sbjct 178 YTDIIIPNETESSLLTGISVNDEPSMLQNAKFFKAHGIKNTIITLGEQGVFYVTADGHHG 237
Query 226 EVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDC 285
VPA V PVDT AGD F G L++ N G+ + +RA +LA G
Sbjct 238 LVPAFKVNPVDTTAAGDTFIGALSSQLSPNLGNFESAITYAQRAS---SLAVQGMGAMPS 294
Query 286 APAAAAIDAAL 296
P A ++ AL
Sbjct 295 IPLAEEVEKAL 305
>gi|148657386|ref|YP_001277591.1| ribokinase [Roseiflexus sp. RS-1]
gi|148569496|gb|ABQ91641.1| ribokinase [Roseiflexus sp. RS-1]
Length=305
Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 115/290 (40%), Positives = 147/290 (51%), Gaps = 31/290 (10%)
Query 16 VCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGD 75
V V GS+NMDL LP PGET+ + PGGKGANQAVA AR G + G GD
Sbjct 3 VVVFGSINMDLVVRTPRLPTPGETLTGHTFFTAPGGKGANQAVACARLGVPTRMVGRVGD 62
Query 76 DPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGAN-----AHLTP 130
D QLRA LR+ V D +T PGPSG A+I VD +AENT+++ PGAN A +
Sbjct 63 DLFGEQLRASLRSFGVQDDGVLTTPGPSGVALIAVDDTAENTIVIVPGANGAVSIADIPR 122
Query 131 VPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVV 190
+ A+ LL QLE+P+ T +AAARAA + V+++ +PA +L A+AD++
Sbjct 123 LERALDGARALLLQLEVPIETVVAAARAAHTRGVTVILDPAPA---LPLPDELYALADII 179
Query 191 IANEHEANDWPSPPTH-------------------FVITLGVRGARYVGADGVFEVPAPT 231
NEHEA H + LG GA A+G T
Sbjct 180 TPNEHEATTLTGIAVHDDQGAIAAARALIARGARRVALKLGACGALTADAEGEQFWSPFT 239
Query 232 VTPVDTAGAGDVFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSG 281
VTPVDT AGD F G LA + G + A+R AAGAL+ G
Sbjct 240 VTPVDTVAAGDAFNGGLAVAL--SEGRSFD--EAIRWGLAAGALSVTRHG 285
>gi|315502297|ref|YP_004081184.1| pfkb domain-containing protein [Micromonospora sp. L5]
gi|315408916|gb|ADU07033.1| PfkB domain protein [Micromonospora sp. L5]
Length=298
Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 115/255 (46%), Positives = 137/255 (54%), Gaps = 21/255 (8%)
Query 15 RVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFG 74
R+ VVGS NMDL + ALPRPGETVL PGGKGANQAVAA RAGA F GA G
Sbjct 5 RIAVVGSANMDLVGIGAALPRPGETVLGDDFVMLPGGKGANQAVAAVRAGASCVFLGAIG 64
Query 75 DDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVP-- 132
D LRA + A V V GPSG A+++V + EN +LV PGANA T +
Sbjct 65 SDSFGVTLRARMTAAGVDTGHLRVVYGPSGVALVMVGGAGENAILVTPGANAAFTSLTAG 124
Query 133 --SAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVV 190
SAV + DVL+ QLE+PV T AA AA+SA V++NA+PA RS +L A D++
Sbjct 125 ELSAVRDADVLVAQLEVPVETVTEAALAARSAGTRVVLNAAPA---RSVPAELLAATDLL 181
Query 191 IANEHEAN-------DWPSPPTHF----VITLGVRGARYVGADG--VFEVPAPTVTPVDT 237
+ NE EA D P+ V+TLG GA YV D P T
Sbjct 182 VVNEPEAQALTGRGRDEPAALLELVPRAVLTLGGDGAWYVDRDRPPTHVPAVPVDVVDST 241
Query 238 AGAGDVFAGVLAANW 252
A AGD F LA W
Sbjct 242 A-AGDAFTAALAVAW 255
>gi|238063171|ref|ZP_04607880.1| ribokinase [Micromonospora sp. ATCC 39149]
gi|237884982|gb|EEP73810.1| ribokinase [Micromonospora sp. ATCC 39149]
Length=299
Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 117/254 (47%), Positives = 139/254 (55%), Gaps = 19/254 (7%)
Query 15 RVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFG 74
RV VVGS NMDL ALPRPGETVL + PGGKGANQAVAA RAGA F GA G
Sbjct 5 RVVVVGSANMDLVATAGALPRPGETVLGSDFVMVPGGKGANQAVAATRAGASCAFLGAIG 64
Query 75 DDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVP-- 132
D LRA + A V V G SG A+++V A EN +LV PGANA T +
Sbjct 65 SDAFGVTLRARITAAGVDTGHLRVVYGASGVALVMVSADGENAILVTPGANAAFTGLTED 124
Query 133 --SAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVV 190
+AV + DVL+ QLEIPVAT AA AA++A V++NA+PA + L D D++
Sbjct 125 ELAAVRDADVLVAQLEIPVATVTEAALAARAAGTRVILNAAPARHVPAELLD---AVDLL 181
Query 191 IANEHEA-------NDWPSPPTHF----VITLGVRGARYVGADGV-FEVPAPTVTPVDTA 238
+ NE+EA D P V+TLG GA YV D VPA V VD+
Sbjct 182 VVNENEARTLTGGGRDDPGALLALVPRAVLTLGGEGAWYVERDVEPVYVPAVRVDVVDST 241
Query 239 GAGDVFAGVLAANW 252
AGD F LA W
Sbjct 242 AAGDAFTAALAVAW 255
>gi|297564700|ref|YP_003683672.1| ribokinase [Meiothermus silvanus DSM 9946]
gi|296849149|gb|ADH62164.1| ribokinase [Meiothermus silvanus DSM 9946]
Length=305
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/306 (41%), Positives = 156/306 (51%), Gaps = 31/306 (10%)
Query 14 PRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAF 73
P + VVGS+NMDL V P PGET+L + PGGKGANQAVAAARAG V+ G
Sbjct 2 PDIIVVGSINMDLVVRVQRHPLPGETLLGSDYQTFPGGKGANQAVAAARAGGSVRMIGCL 61
Query 74 GDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTP--- 130
G D AQL L + + V GPSG A IVV+A +N+++VAPG+N L P
Sbjct 62 GSDSFGAQLLEGLLQDGIDTHWIKRVEGPSGVAFIVVNAQGQNSIIVAPGSNYRLLPEDL 121
Query 131 VPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVV 190
V+L QLE+P+ T L AAR + A V++NA+PA RS D D++
Sbjct 122 KAEVFRGAKVILLQLEVPLPTVLEAARRGKEAGTTVILNAAPA---RSLSADALHDVDLL 178
Query 191 IANEHEAN---DWPSPP----------------THFVITLGVRGARYVGADGVFEVPAPT 231
+ NE EA + +P + VITLG G + G VPA
Sbjct 179 VVNEFEAGIVLEQKAPQGIEEALAAAQSLRERVSSVVITLGAEGCVWADTSGQGYVPAFQ 238
Query 232 VTPVDTAGAGDVFAGVLAANWPRNPGSPAERLR-ALRRACAAGALATLVSGVGDCAPAAA 290
V PVDT AGD F G+LA+ + E L ALR A AAGALAT G P A
Sbjct 239 VQPVDTTAAGDAFVGMLASRLAKG-----EALAPALRWASAAGALATTQEGAQPSLPTEA 293
Query 291 AIDAAL 296
+++ L
Sbjct 294 EVESFL 299
>gi|320333703|ref|YP_004170414.1| ribokinase [Deinococcus maricopensis DSM 21211]
gi|319754992|gb|ADV66749.1| Ribokinase [Deinococcus maricopensis DSM 21211]
Length=293
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 131/297 (45%), Positives = 156/297 (53%), Gaps = 24/297 (8%)
Query 16 VCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGD 75
V VVGSVN DL +P PGETVL PGGKGANQAVA ARAGA V F GA G
Sbjct 3 VLVVGSVNADLIVRAPHIPAPGETVLGGDAIALPGGKGANQAVACARAGAHVHFCGAVGH 62
Query 76 DPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTP--VPS 133
D AA A+LRA+ V LD T+ P+G A+I V A EN + VA GANAH+TP +P
Sbjct 63 DAFAAIATANLRADGVNLDALHTLDAPTGLALITVSAEGENAITVASGANAHMTPGHLPD 122
Query 134 AVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIAN 193
+ DVLL QLE+P++ AAA+ A+ A A V++NA+PA R+ +L D +I N
Sbjct 123 -LHGTDVLLLQLELPLSVVEAAAQQAKRAGAHVLLNAAPA---RTLPAELLQHIDTLILN 178
Query 194 EHEAND--------------WPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAG 239
E E P ++TLG G+ V ADG + A V VDT G
Sbjct 179 EGELTAVAGAGSTETQARALLSRGPHTVIVTLGGDGSLAVTADGTHQQAALPVNVVDTTG 238
Query 240 AGDVFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAAL 296
AGD F G AA P ALR A AGALAT G P A I A L
Sbjct 239 AGDTFCGAFAAALASGQPLP----DALRFANVAGALATTQLGAQAAMPTHAEIQAHL 291
>gi|156743693|ref|YP_001433822.1| ribokinase [Roseiflexus castenholzii DSM 13941]
gi|156235021|gb|ABU59804.1| ribokinase [Roseiflexus castenholzii DSM 13941]
Length=304
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/301 (41%), Positives = 153/301 (51%), Gaps = 31/301 (10%)
Query 16 VCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGD 75
+ V GS+NMDL LP PGET+ S PGGKGANQAVA AR A + G GD
Sbjct 3 IVVFGSINMDLVVRTPRLPAPGETLTGHSFFTAPGGKGANQAVACARLDAPTRMVGRVGD 62
Query 76 DPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANA-----HLTP 130
D QLR LR+ V D +T PGPSG A+I VD +AENT+++ PGAN +
Sbjct 63 DLFGEQLRHSLRSFGVQDDGVLTTPGPSGVALIAVDDAAENTIVIVPGANGAVGSEDMPR 122
Query 131 VPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVV 190
+ A+ LL QLE P+AT AAARA ++ A V+++ +PA +L A+AD++
Sbjct 123 LERALDGARALLLQLETPLATVAAAARAGRARGATVILDPAPA---LPLPDELYALADIL 179
Query 191 IANEHEANDWPSPPTH-------------------FVITLGVRGARYVGADGVFEVPAPT 231
NE EA P H +I LG RGA A+GV PA T
Sbjct 180 TPNESEATTLTGIPVHDEQSAAAAARALRARGARTVIIKLGARGALAADANGVRFWPAFT 239
Query 232 VTPVDTAGAGDVFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAA 291
VT VDT AGD F G LA + G P E A+R AAGAL+ G P A
Sbjct 240 VTAVDTVAAGDAFNGGLAVAL--SEGRPFE--EAIRWGLAAGALSVTKHGAQPSMPDRAE 295
Query 292 I 292
+
Sbjct 296 L 296
>gi|298291723|ref|YP_003693662.1| PfkB domain-containing protein [Starkeya novella DSM 506]
gi|296928234|gb|ADH89043.1| PfkB domain protein [Starkeya novella DSM 506]
Length=315
Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 113/273 (42%), Positives = 147/273 (54%), Gaps = 25/273 (9%)
Query 16 VCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGD 75
+ V GS+NMDL V A+PRPGETVL+ GGKGANQAVAAAR G +V G G+
Sbjct 2 ILVFGSINMDLVASVAAIPRPGETVLSPGYRTLFGGKGANQAVAAARMGGEVAMVGRVGN 61
Query 76 DPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLT--PVPS 133
D A R +L AN V + +T P+G A I VDA+ EN + VA GAN + +P
Sbjct 62 DGFGASCRGNLAANGVATEHILTGAEPTGCAFITVDAAGENAITVASGANGAVAAGDLPE 121
Query 134 AVANCD-VLLTQLEIPVATALAAARAAQSADAVVMVNASPA--GQDRSSLQDLAAIADVV 190
++ D V + Q+E+P+A +L AAR ++A V+ N +PA G + L+D+ A DV
Sbjct 122 SLVGADTVAVMQMEVPLAASLDAARKVKAAGGRVVWNLAPAPPGLKAADLRDILAATDVF 181
Query 191 IANEHE----------ANDWP--------SPPTHFVITLGVRGARYVGADGVF-EVPAPT 231
+ NE E A+D+ + T V+T G GA DG PA
Sbjct 182 VVNEIEAMMAAEALGGASDFKDAARRLVQAGSTICVVTAGAAGAFACEPDGTLHHAPALP 241
Query 232 VTPVDTAGAGDVFAGVLAANWPRNPGSPAERLR 264
VTPVDT GAGD F GVLAA + G E LR
Sbjct 242 VTPVDTTGAGDTFVGVLAAELALH-GRLDEALR 273
Lambda K H
0.316 0.129 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 511987440690
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40