BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2441c
Length=86
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609578|ref|NP_216957.1| 50S ribosomal protein L27 [Mycobact... 169 2e-40
gi|183983746|ref|YP_001852037.1| 50S ribosomal protein L27 RpmA ... 154 3e-36
gi|118618974|ref|YP_907306.1| 50S ribosomal protein L27 [Mycobac... 154 6e-36
gi|15827768|ref|NP_302031.1| 50S ribosomal protein L27 [Mycobact... 153 8e-36
gi|296170491|ref|ZP_06852078.1| 50S ribosomal protein L27 [Mycob... 153 1e-35
gi|240170913|ref|ZP_04749572.1| 50S ribosomal protein L27 [Mycob... 149 1e-34
gi|41408363|ref|NP_961199.1| 50S ribosomal protein L27 [Mycobact... 149 1e-34
gi|118471474|ref|YP_888888.1| 50S ribosomal protein L27 [Mycobac... 147 7e-34
gi|333990105|ref|YP_004522719.1| 50S ribosomal protein L27 RpmA ... 146 1e-33
gi|120404899|ref|YP_954728.1| 50S ribosomal protein L27 [Mycobac... 145 2e-33
gi|343925342|ref|ZP_08764867.1| 50S ribosomal protein L27 [Gordo... 145 2e-33
gi|262201997|ref|YP_003273205.1| 50S ribosomal protein L27 [Gord... 144 5e-33
gi|54023321|ref|YP_117563.1| 50S ribosomal protein L27 [Nocardia... 144 6e-33
gi|111018322|ref|YP_701294.1| 50S ribosomal protein L27 [Rhodoco... 144 6e-33
gi|302528913|ref|ZP_07281255.1| ribosomal protein L27 [Streptomy... 144 6e-33
gi|108800515|ref|YP_640712.1| 50S ribosomal protein L27 [Mycobac... 144 6e-33
gi|226360448|ref|YP_002778226.1| 50S ribosomal protein L27 [Rhod... 143 7e-33
gi|226307280|ref|YP_002767240.1| 50S ribosomal protein L27 [Rhod... 143 8e-33
gi|145223223|ref|YP_001133901.1| 50S ribosomal protein L27 [Myco... 143 1e-32
gi|312140343|ref|YP_004007679.1| 50S ribosomal protein l27 rpma ... 143 1e-32
gi|169628701|ref|YP_001702350.1| 50S ribosomal protein L27 [Myco... 142 1e-32
gi|333918795|ref|YP_004492376.1| 50S ribosomal protein L27 [Amyc... 142 2e-32
gi|256375326|ref|YP_003098986.1| 50S ribosomal protein L27 [Acti... 142 2e-32
gi|238060596|ref|ZP_04605305.1| 50S ribosomal protein L27P [Micr... 141 3e-32
gi|319948144|ref|ZP_08022307.1| 50S ribosomal protein L27 [Dietz... 141 3e-32
gi|302869335|ref|YP_003837972.1| 50S ribosomal protein L27 [Micr... 140 4e-32
gi|330469629|ref|YP_004407372.1| 50S ribosomal protein L27 [Verr... 140 5e-32
gi|300788542|ref|YP_003768833.1| 50S ribosomal protein L27 [Amyc... 140 7e-32
gi|256825000|ref|YP_003148960.1| 50S ribosomal protein L27P [Kyt... 139 1e-31
gi|296130122|ref|YP_003637372.1| ribosomal protein L27 [Cellulom... 139 2e-31
gi|145595992|ref|YP_001160289.1| 50S ribosomal protein L27 [Sali... 139 2e-31
gi|256832875|ref|YP_003161602.1| 50S ribosomal protein L27 [Jone... 138 2e-31
gi|336320297|ref|YP_004600265.1| 50S ribosomal protein L27 [Cell... 138 2e-31
gi|326382841|ref|ZP_08204531.1| 50S ribosomal protein L27 [Gordo... 138 3e-31
gi|311896010|dbj|BAJ28418.1| putative ribosomal protein L27 [Kit... 137 4e-31
gi|170782189|ref|YP_001710522.1| 50S ribosomal protein L27 [Clav... 137 6e-31
gi|332670930|ref|YP_004453938.1| 50S ribosomal protein L27 [Cell... 137 6e-31
gi|269794464|ref|YP_003313919.1| 50S ribosomal protein L27P [San... 137 8e-31
gi|227548741|ref|ZP_03978790.1| 50S ribosomal protein L27 [Coryn... 136 1e-30
gi|134098001|ref|YP_001103662.1| 50S ribosomal protein L27 [Sacc... 136 1e-30
gi|148272670|ref|YP_001222231.1| 50S ribosomal protein L27 [Clav... 135 1e-30
gi|344999602|ref|YP_004802456.1| 50S ribosomal protein L27 [Stre... 135 2e-30
gi|284990125|ref|YP_003408679.1| 50S ribosomal protein L27 [Geod... 135 2e-30
gi|325001210|ref|ZP_08122322.1| 50S ribosomal protein L27 [Pseud... 135 2e-30
gi|239987579|ref|ZP_04708243.1| 50S ribosomal protein L27 [Strep... 135 2e-30
gi|297199639|ref|ZP_06917036.1| ribosomal protein L27 [Streptomy... 135 2e-30
gi|227504026|ref|ZP_03934075.1| 50S ribosomal protein L27 [Coryn... 135 2e-30
gi|72162580|ref|YP_290237.1| 50S ribosomal protein L27 [Thermobi... 135 3e-30
gi|291439688|ref|ZP_06579078.1| 50S ribosomal protein L27 [Strep... 135 3e-30
gi|225021684|ref|ZP_03710876.1| hypothetical protein CORMATOL_01... 134 3e-30
>gi|15609578|ref|NP_216957.1| 50S ribosomal protein L27 [Mycobacterium tuberculosis H37Rv]
gi|15841963|ref|NP_337000.1| 50S ribosomal protein L27 [Mycobacterium tuberculosis CDC1551]
gi|31793622|ref|NP_856115.1| 50S ribosomal protein L27 [Mycobacterium bovis AF2122/97]
79 more sequence titles
Length=86
Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/86 (100%), Positives = 86/86 (100%), Gaps = 0/86 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIVGSTTA 86
AKTAGAVEFGIKRGRKTVSIVGSTTA
Sbjct 61 AKTAGAVEFGIKRGRKTVSIVGSTTA 86
>gi|183983746|ref|YP_001852037.1| 50S ribosomal protein L27 RpmA [Mycobacterium marinum M]
gi|226737956|sp|B2HMG2.1|RL27_MYCMM RecName: Full=50S ribosomal protein L27
gi|183177072|gb|ACC42182.1| 50S ribosomal protein L27 RpmA [Mycobacterium marinum M]
Length=88
Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/85 (91%), Positives = 81/85 (96%), Gaps = 0/85 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDSAAQRLGVKR+GGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSAAQRLGVKRFGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIVGSTT 85
AK AGAV+FGIKRGRKT++IV T
Sbjct 61 AKAAGAVQFGIKRGRKTINIVEPAT 85
>gi|118618974|ref|YP_907306.1| 50S ribosomal protein L27 [Mycobacterium ulcerans Agy99]
gi|166225018|sp|A0PU16.1|RL27_MYCUA RecName: Full=50S ribosomal protein L27
gi|118571084|gb|ABL05835.1| 50S ribosomal protein L27 RpmA [Mycobacterium ulcerans Agy99]
Length=88
Score = 154 bits (388), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 77/85 (91%), Positives = 80/85 (95%), Gaps = 0/85 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDSAA RLGVKR+GGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSAAHRLGVKRFGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIVGSTT 85
AK AGAVEFGIKRGRKT++IV T
Sbjct 61 AKAAGAVEFGIKRGRKTINIVEPAT 85
>gi|15827768|ref|NP_302031.1| 50S ribosomal protein L27 [Mycobacterium leprae TN]
gi|221230245|ref|YP_002503661.1| 50S ribosomal protein L27 [Mycobacterium leprae Br4923]
gi|13633837|sp|Q9CBZ3.1|RL27_MYCLE RecName: Full=50S ribosomal protein L27
gi|254801112|sp|B8ZRN4.1|RL27_MYCLB RecName: Full=50S ribosomal protein L27
gi|13093320|emb|CAC30416.1| 50S ribosomal protein L27 [Mycobacterium leprae]
gi|219933352|emb|CAR71560.1| 50S ribosomal protein L27 [Mycobacterium leprae Br4923]
Length=88
Score = 153 bits (387), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 76/81 (94%), Positives = 80/81 (99%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDSAAQRLGVKR+GGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSAAQRLGVKRFGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A +AGAVEFG+KRGRKTV+IV
Sbjct 61 ATSAGAVEFGVKRGRKTVNIV 81
>gi|296170491|ref|ZP_06852078.1| 50S ribosomal protein L27 [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295894843|gb|EFG74565.1| 50S ribosomal protein L27 [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=88
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/87 (90%), Positives = 82/87 (95%), Gaps = 2/87 (2%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDSAAQRLGVKR+GGQ+VKAGEI+VRQRGTKFHPGVNVGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSAAQRLGVKRFGGQIVKAGEIIVRQRGTKFHPGVNVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV--GSTT 85
AK AGAVEF +KRGRKTVSIV G TT
Sbjct 61 AKEAGAVEFAVKRGRKTVSIVAAGQTT 87
>gi|240170913|ref|ZP_04749572.1| 50S ribosomal protein L27 [Mycobacterium kansasii ATCC 12478]
Length=84
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/81 (92%), Positives = 78/81 (97%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDSAAQRLGVKR+GGQVVKAGEIL+RQRGTK HPG+NVGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSAAQRLGVKRFGGQVVKAGEILIRQRGTKIHPGINVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
AK GAVEFGIKRGRKTV+IV
Sbjct 61 AKAGGAVEFGIKRGRKTVNIV 81
>gi|41408363|ref|NP_961199.1| 50S ribosomal protein L27 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118465691|ref|YP_880957.1| 50S ribosomal protein L27 [Mycobacterium avium 104]
gi|254774546|ref|ZP_05216062.1| 50S ribosomal protein L27 [Mycobacterium avium subsp. avium ATCC
25291]
gi|67461475|sp|Q73XP4.1|RL27_MYCPA RecName: Full=50S ribosomal protein L27
gi|166225012|sp|A0QDG9.1|RL27_MYCA1 RecName: Full=50S ribosomal protein L27
gi|41396719|gb|AAS04582.1| RpmA [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118166978|gb|ABK67875.1| ribosomal protein L27 [Mycobacterium avium 104]
gi|336458199|gb|EGO37180.1| ribosomal protein L27 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=88
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/86 (88%), Positives = 80/86 (94%), Gaps = 0/86 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDSAAQRLGVKR+GGQ+VKAGEI+VRQRGTKFHPG VGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSAAQRLGVKRFGGQIVKAGEIIVRQRGTKFHPGTGVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIVGSTTA 86
AK AGAVEFGIKRGRKTV+IV + A
Sbjct 61 AKQAGAVEFGIKRGRKTVNIVAAGQA 86
>gi|118471474|ref|YP_888888.1| 50S ribosomal protein L27 [Mycobacterium smegmatis str. MC2 155]
gi|166225014|sp|A0R150.1|RL27_MYCS2 RecName: Full=50S ribosomal protein L27
gi|118172761|gb|ABK73657.1| ribosomal protein L27 [Mycobacterium smegmatis str. MC2 155]
Length=88
Score = 147 bits (370), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 74/81 (92%), Positives = 76/81 (94%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDSAAQRLGVKR+GGQVVKAGEILVRQRGT FHPGVNVGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSAAQRLGVKRFGGQVVKAGEILVRQRGTHFHPGVNVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A GAVEFG KRGRKTV+IV
Sbjct 61 ALAPGAVEFGAKRGRKTVNIV 81
>gi|333990105|ref|YP_004522719.1| 50S ribosomal protein L27 RpmA [Mycobacterium sp. JDM601]
gi|333486074|gb|AEF35466.1| 50S ribosomal protein L27 RpmA [Mycobacterium sp. JDM601]
Length=88
Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/81 (89%), Positives = 76/81 (94%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDS AQRLGVKR+GGQVVKAGEILVRQRGT FHPG+NVGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSNAQRLGVKRFGGQVVKAGEILVRQRGTHFHPGINVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A GAVEFG+KRGRKTV+IV
Sbjct 61 ATAPGAVEFGLKRGRKTVNIV 81
>gi|120404899|ref|YP_954728.1| 50S ribosomal protein L27 [Mycobacterium vanbaalenii PYR-1]
gi|166225019|sp|A1TC22.1|RL27_MYCVP RecName: Full=50S ribosomal protein L27
gi|119957717|gb|ABM14722.1| LSU ribosomal protein L27P [Mycobacterium vanbaalenii PYR-1]
Length=88
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/86 (88%), Positives = 77/86 (90%), Gaps = 0/86 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDSAAQRLGVKR+GGQVVKAGEILVRQRGT FHPGVNVGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSAAQRLGVKRFGGQVVKAGEILVRQRGTHFHPGVNVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIVGSTTA 86
A GAVEFG KRGRK V+IV T A
Sbjct 61 ATAPGAVEFGTKRGRKYVNIVRVTRA 86
>gi|343925342|ref|ZP_08764867.1| 50S ribosomal protein L27 [Gordonia alkanivorans NBRC 16433]
gi|343764781|dbj|GAA11793.1| 50S ribosomal protein L27 [Gordonia alkanivorans NBRC 16433]
Length=87
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/84 (89%), Positives = 76/84 (91%), Gaps = 0/84 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDS AQRLGVKR+GGQ V AGEILVRQRGTKFHPGVNVGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSNAQRLGVKRFGGQQVSAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIVGST 84
A AGAVEFG KRGRKTV+IV T
Sbjct 61 ALAAGAVEFGSKRGRKTVNIVPET 84
>gi|262201997|ref|YP_003273205.1| 50S ribosomal protein L27 [Gordonia bronchialis DSM 43247]
gi|262085344|gb|ACY21312.1| ribosomal protein L27 [Gordonia bronchialis DSM 43247]
Length=87
Score = 144 bits (363), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/81 (91%), Positives = 75/81 (93%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDS AQRLGVKR+GGQ V AGEILVRQRGTKFHPGVNVGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSNAQRLGVKRFGGQRVSAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A AGAVEFG KRGRKTV+IV
Sbjct 61 ALEAGAVEFGTKRGRKTVNIV 81
>gi|54023321|ref|YP_117563.1| 50S ribosomal protein L27 [Nocardia farcinica IFM 10152]
gi|67461346|sp|Q5Z042.1|RL27_NOCFA RecName: Full=50S ribosomal protein L27
gi|54014829|dbj|BAD56199.1| putative ribosomal protein L27 [Nocardia farcinica IFM 10152]
Length=88
Score = 144 bits (362), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 72/81 (89%), Positives = 75/81 (93%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDS AQRLGVKR+GGQ VKAGEILVRQRGT FHPGVNVGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSNAQRLGVKRFGGQTVKAGEILVRQRGTHFHPGVNVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A AGAV+FG KRGRKTV+IV
Sbjct 61 ALAAGAVQFGTKRGRKTVNIV 81
>gi|111018322|ref|YP_701294.1| 50S ribosomal protein L27 [Rhodococcus jostii RHA1]
gi|123340903|sp|Q0SH50.1|RL27_RHOSR RecName: Full=50S ribosomal protein L27
gi|110817852|gb|ABG93136.1| 50S ribosomal protein L27 [Rhodococcus jostii RHA1]
Length=87
Score = 144 bits (362), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 72/81 (89%), Positives = 75/81 (93%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDS AQRLGVKR+GGQ V AGEILVRQRGT FHPGVNVGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSNAQRLGVKRFGGQSVSAGEILVRQRGTHFHPGVNVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A +AGAVEFG KRGRKTV+IV
Sbjct 61 ALSAGAVEFGTKRGRKTVNIV 81
>gi|302528913|ref|ZP_07281255.1| ribosomal protein L27 [Streptomyces sp. AA4]
gi|302437808|gb|EFL09624.1| ribosomal protein L27 [Streptomyces sp. AA4]
Length=85
Score = 144 bits (362), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 72/81 (89%), Positives = 75/81 (93%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDS AQRLGVKR+GGQ V AGEIL+RQRGTKFHPGVNVGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSNAQRLGVKRFGGQEVNAGEILIRQRGTKFHPGVNVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A AGAVEFG KRGRKTV+IV
Sbjct 61 ALAAGAVEFGSKRGRKTVNIV 81
>gi|108800515|ref|YP_640712.1| 50S ribosomal protein L27 [Mycobacterium sp. MCS]
gi|119869654|ref|YP_939606.1| 50S ribosomal protein L27 [Mycobacterium sp. KMS]
gi|126436131|ref|YP_001071822.1| 50S ribosomal protein L27 [Mycobacterium sp. JLS]
6 more sequence titles
Length=88
Score = 144 bits (362), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/81 (88%), Positives = 76/81 (94%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDSAAQRLGVKR+GGQVVKAGEI+VRQRGT FHPGVNVGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSAAQRLGVKRFGGQVVKAGEIIVRQRGTHFHPGVNVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A G+VEFG +RGRKTV+IV
Sbjct 61 ATAPGSVEFGSRRGRKTVNIV 81
>gi|226360448|ref|YP_002778226.1| 50S ribosomal protein L27 [Rhodococcus opacus B4]
gi|254801476|sp|C1AVK1.1|RL27_RHOOB RecName: Full=50S ribosomal protein L27
gi|226238933|dbj|BAH49281.1| 50S ribosomal protein L27 [Rhodococcus opacus B4]
Length=87
Score = 143 bits (361), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 72/81 (89%), Positives = 75/81 (93%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDS AQRLGVKR+GGQ V AGEILVRQRGT FHPGVNVGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSNAQRLGVKRFGGQSVSAGEILVRQRGTHFHPGVNVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A +AGAVEFG KRGRKTV+IV
Sbjct 61 ALSAGAVEFGTKRGRKTVNIV 81
>gi|226307280|ref|YP_002767240.1| 50S ribosomal protein L27 [Rhodococcus erythropolis PR4]
gi|229493199|ref|ZP_04386991.1| ribosomal protein L27 [Rhodococcus erythropolis SK121]
gi|259646720|sp|C1A1L6.1|RL27_RHOE4 RecName: Full=50S ribosomal protein L27
gi|226186397|dbj|BAH34501.1| 50S ribosomal protein L27 [Rhodococcus erythropolis PR4]
gi|229319930|gb|EEN85759.1| ribosomal protein L27 [Rhodococcus erythropolis SK121]
Length=89
Score = 143 bits (361), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 73/86 (85%), Positives = 76/86 (89%), Gaps = 0/86 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDS AQRLGVKR+GGQ V AGEILVRQRGT FHPGVNVGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSNAQRLGVKRFGGQSVSAGEILVRQRGTHFHPGVNVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIVGSTTA 86
A AGAVEFG KRGRKTV+IV + A
Sbjct 61 ALAAGAVEFGQKRGRKTVNIVPAVVA 86
>gi|145223223|ref|YP_001133901.1| 50S ribosomal protein L27 [Mycobacterium gilvum PYR-GCK]
gi|315443681|ref|YP_004076560.1| 50S ribosomal protein L27P [Mycobacterium sp. Spyr1]
gi|189042399|sp|A4T2J3.1|RL27_MYCGI RecName: Full=50S ribosomal protein L27
gi|145215709|gb|ABP45113.1| LSU ribosomal protein L27P [Mycobacterium gilvum PYR-GCK]
gi|315261984|gb|ADT98725.1| LSU ribosomal protein L27P [Mycobacterium sp. Spyr1]
Length=88
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/81 (89%), Positives = 74/81 (92%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDS AQRLGVKR+GGQVVKAGEILVRQRGT FHPGVNVGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSNAQRLGVKRFGGQVVKAGEILVRQRGTHFHPGVNVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A GAVEFG KRGRK V+IV
Sbjct 61 ATAPGAVEFGTKRGRKYVNIV 81
>gi|312140343|ref|YP_004007679.1| 50S ribosomal protein l27 rpma [Rhodococcus equi 103S]
gi|311889682|emb|CBH48999.1| 50S ribosomal protein L27 RpmA [Rhodococcus equi 103S]
Length=87
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/81 (89%), Positives = 74/81 (92%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDS AQRLGVKR+GGQ V AGEILVRQRGT FHPGVNVGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSNAQRLGVKRFGGQSVSAGEILVRQRGTHFHPGVNVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A AGAVEFG KRGRKTV+IV
Sbjct 61 ALAAGAVEFGTKRGRKTVNIV 81
>gi|169628701|ref|YP_001702350.1| 50S ribosomal protein L27 [Mycobacterium abscessus ATCC 19977]
gi|226737954|sp|B1MMY4.1|RL27_MYCA9 RecName: Full=50S ribosomal protein L27
gi|169240668|emb|CAM61696.1| 50S ribosomal protein L27 [Mycobacterium abscessus]
Length=85
Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/81 (87%), Positives = 76/81 (94%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDSAAQRLGVKR+GGQVVKAGEILVRQRGT FHPGVNVGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSAAQRLGVKRFGGQVVKAGEILVRQRGTHFHPGVNVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A +AG VEFG +RGR+ V+I+
Sbjct 61 ATSAGTVEFGARRGRRVVNIL 81
>gi|333918795|ref|YP_004492376.1| 50S ribosomal protein L27 [Amycolicicoccus subflavus DQS3-9A1]
gi|333481016|gb|AEF39576.1| 50S ribosomal protein L27 [Amycolicicoccus subflavus DQS3-9A1]
Length=86
Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/81 (87%), Positives = 76/81 (94%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDS AQRLGVKR+GGQ+V AGEILVRQRGT FHPGVNVGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSNAQRLGVKRFGGQLVNAGEILVRQRGTHFHPGVNVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A +AG+V+FG KRGRKTV+IV
Sbjct 61 ALSAGSVQFGAKRGRKTVNIV 81
>gi|256375326|ref|YP_003098986.1| 50S ribosomal protein L27 [Actinosynnema mirum DSM 43827]
gi|255919629|gb|ACU35140.1| ribosomal protein L27 [Actinosynnema mirum DSM 43827]
Length=87
Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/81 (88%), Positives = 75/81 (93%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDS Q LGVKR+GGQVVKAGEIL+RQRGTKFHPGVNVGRG DDTLF
Sbjct 1 MAHKKGASSSRNGRDSNPQYLGVKRFGGQVVKAGEILIRQRGTKFHPGVNVGRGKDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A +AGAVEFG KRGRKTV+IV
Sbjct 61 ALSAGAVEFGSKRGRKTVNIV 81
>gi|238060596|ref|ZP_04605305.1| 50S ribosomal protein L27P [Micromonospora sp. ATCC 39149]
gi|237882407|gb|EEP71235.1| 50S ribosomal protein L27P [Micromonospora sp. ATCC 39149]
Length=84
Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/81 (88%), Positives = 75/81 (93%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDSAAQRLGVKR+GGQVV AGEIL+RQRGTKFHPG VGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSAAQRLGVKRFGGQVVSAGEILIRQRGTKFHPGDMVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A AG+V+FG KRGRKTVSIV
Sbjct 61 ALAAGSVQFGTKRGRKTVSIV 81
>gi|319948144|ref|ZP_08022307.1| 50S ribosomal protein L27 [Dietzia cinnamea P4]
gi|319438212|gb|EFV93169.1| 50S ribosomal protein L27 [Dietzia cinnamea P4]
Length=87
Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/81 (88%), Positives = 75/81 (93%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MA KKGASS+RNGRDS AQRLGVKR+GGQ V AGEILVRQRGTKFHPGVNVGRGGDDTLF
Sbjct 1 MASKKGASSTRNGRDSNAQRLGVKRFGGQEVNAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A +AGAVEFG KRGRKTV+IV
Sbjct 61 ALSAGAVEFGTKRGRKTVNIV 81
>gi|302869335|ref|YP_003837972.1| 50S ribosomal protein L27 [Micromonospora aurantiaca ATCC 27029]
gi|315504190|ref|YP_004083077.1| 50S ribosomal protein L27 [Micromonospora sp. L5]
gi|302572194|gb|ADL48396.1| ribosomal protein L27 [Micromonospora aurantiaca ATCC 27029]
gi|315410809|gb|ADU08926.1| ribosomal protein L27 [Micromonospora sp. L5]
Length=84
Score = 140 bits (354), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/81 (88%), Positives = 75/81 (93%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDSAAQRLGVKR+GGQVV AGEIL+RQRGTKFHPG VGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSAAQRLGVKRFGGQVVSAGEILIRQRGTKFHPGDLVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A AG+V+FG KRGRKTVSIV
Sbjct 61 ALAAGSVQFGTKRGRKTVSIV 81
>gi|330469629|ref|YP_004407372.1| 50S ribosomal protein L27 [Verrucosispora maris AB-18-032]
gi|328812600|gb|AEB46772.1| 50S ribosomal protein L27 [Verrucosispora maris AB-18-032]
Length=84
Score = 140 bits (354), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/81 (89%), Positives = 75/81 (93%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDSAAQRLGVKR+GGQVV AGEI+VRQRGTKFHPG VGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSAAQRLGVKRFGGQVVSAGEIIVRQRGTKFHPGDLVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A AGAV+FG KRGRKTVSIV
Sbjct 61 ALAAGAVQFGSKRGRKTVSIV 81
>gi|300788542|ref|YP_003768833.1| 50S ribosomal protein L27 [Amycolatopsis mediterranei U32]
gi|299798056|gb|ADJ48431.1| large subunit ribosomal protein L27 [Amycolatopsis mediterranei
U32]
gi|340530147|gb|AEK45352.1| 50S ribosomal protein L27 [Amycolatopsis mediterranei S699]
Length=86
Score = 140 bits (353), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 70/81 (87%), Positives = 74/81 (92%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDS AQRLGVKR+GGQ V AGEIL+RQRGTKFHPGVNVGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSNAQRLGVKRFGGQQVNAGEILIRQRGTKFHPGVNVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A GAV+FG KRGRKTV+IV
Sbjct 61 ALATGAVQFGEKRGRKTVNIV 81
>gi|256825000|ref|YP_003148960.1| 50S ribosomal protein L27P [Kytococcus sedentarius DSM 20547]
gi|256688393|gb|ACV06195.1| LSU ribosomal protein L27P [Kytococcus sedentarius DSM 20547]
Length=88
Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/86 (84%), Positives = 75/86 (88%), Gaps = 0/86 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MA KKG SSSRNGRDS AQRLGVKR+GGQVVKAGEI+VRQRGT FHPG NVGRG DDTLF
Sbjct 1 MASKKGVSSSRNGRDSNAQRLGVKRFGGQVVKAGEIIVRQRGTHFHPGENVGRGKDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIVGSTTA 86
A AGAVEFG KRGRKTVSIVG+ A
Sbjct 61 ALEAGAVEFGSKRGRKTVSIVGADAA 86
>gi|296130122|ref|YP_003637372.1| ribosomal protein L27 [Cellulomonas flavigena DSM 20109]
gi|296021937|gb|ADG75173.1| ribosomal protein L27 [Cellulomonas flavigena DSM 20109]
Length=84
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/83 (85%), Positives = 74/83 (90%), Gaps = 0/83 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDS AQRLGVKR+GGQVVKAGEI+VRQRGT FHPG NVGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSNAQRLGVKRFGGQVVKAGEIIVRQRGTHFHPGENVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIVGS 83
A TAG+V FG +RGRK V IV S
Sbjct 61 ALTAGSVAFGTRRGRKVVDIVAS 83
>gi|145595992|ref|YP_001160289.1| 50S ribosomal protein L27 [Salinispora tropica CNB-440]
gi|189042410|sp|A4XAG2.1|RL27_SALTO RecName: Full=50S ribosomal protein L27
gi|145305329|gb|ABP55911.1| LSU ribosomal protein L27P [Salinispora tropica CNB-440]
Length=84
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/81 (86%), Positives = 75/81 (93%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDSAAQRLGVKR+GGQ+V AGEI++RQRGTKFHPG VGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSAAQRLGVKRFGGQLVSAGEIIIRQRGTKFHPGDLVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A AG+V+FG KRGRKTVSIV
Sbjct 61 ALAAGSVQFGTKRGRKTVSIV 81
>gi|256832875|ref|YP_003161602.1| 50S ribosomal protein L27 [Jonesia denitrificans DSM 20603]
gi|256686406|gb|ACV09299.1| ribosomal protein L27 [Jonesia denitrificans DSM 20603]
Length=84
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/81 (84%), Positives = 74/81 (92%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASS+RNGRDS AQRLGVKR+GGQVVKAGEI+VRQRGT FHPG NVGRGGDDTLF
Sbjct 1 MAHKKGASSTRNGRDSNAQRLGVKRFGGQVVKAGEIIVRQRGTHFHPGENVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A TAGAV+FG +RGRK + IV
Sbjct 61 ALTAGAVQFGTRRGRKVIDIV 81
>gi|336320297|ref|YP_004600265.1| 50S ribosomal protein L27 [Cellvibrio gilvus ATCC 13127]
gi|336103878|gb|AEI11697.1| ribosomal protein L27 [Cellvibrio gilvus ATCC 13127]
Length=85
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/81 (86%), Positives = 73/81 (91%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDS AQRLGVKR+GGQVVKAGEILVRQRGT FHPG NVGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSNAQRLGVKRFGGQVVKAGEILVRQRGTHFHPGNNVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A AGAV+FG +RGRK + IV
Sbjct 61 ALAAGAVQFGTRRGRKVIDIV 81
>gi|326382841|ref|ZP_08204531.1| 50S ribosomal protein L27 [Gordonia neofelifaecis NRRL B-59395]
gi|326198431|gb|EGD55615.1| 50S ribosomal protein L27 [Gordonia neofelifaecis NRRL B-59395]
Length=87
Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/86 (82%), Positives = 75/86 (88%), Gaps = 0/86 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDS AQRLGVKR+GGQVV AGEI+VRQRGTKFHPGV VGRG DDTLF
Sbjct 1 MAHKKGASSSRNGRDSNAQRLGVKRFGGQVVSAGEIIVRQRGTKFHPGVGVGRGKDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIVGSTTA 86
A AGAV+F +KRGRKTV+IV A
Sbjct 61 ALAAGAVKFDVKRGRKTVNIVPEPVA 86
>gi|311896010|dbj|BAJ28418.1| putative ribosomal protein L27 [Kitasatospora setae KM-6054]
Length=85
Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/81 (84%), Positives = 74/81 (92%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASS+RNGRDS AQRLGVKR+GGQVV AGEI+VRQRGT FHPG NVGRGGDDTLF
Sbjct 1 MAHKKGASSTRNGRDSNAQRLGVKRFGGQVVSAGEIIVRQRGTHFHPGANVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A TAGAV+FG +RGRK V+IV
Sbjct 61 ALTAGAVQFGNRRGRKVVNIV 81
>gi|170782189|ref|YP_001710522.1| 50S ribosomal protein L27 [Clavibacter michiganensis subsp. sepedonicus]
gi|189042382|sp|B0RDG4.1|RL27_CLAMS RecName: Full=50S ribosomal protein L27
gi|169156758|emb|CAQ01920.1| 50S ribosomal protein L27 [Clavibacter michiganensis subsp. sepedonicus]
Length=84
Score = 137 bits (345), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/81 (84%), Positives = 75/81 (93%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASS+RNGRDS AQRLGVKR+GGQVV AGEI+VRQRGT FHPGVNVGRGGDDTLF
Sbjct 1 MAHKKGASSTRNGRDSNAQRLGVKRFGGQVVGAGEIIVRQRGTHFHPGVNVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A +AG+VEFG+K GRK V+IV
Sbjct 61 ALSAGSVEFGVKGGRKVVNIV 81
>gi|332670930|ref|YP_004453938.1| 50S ribosomal protein L27 [Cellulomonas fimi ATCC 484]
gi|332339968|gb|AEE46551.1| ribosomal protein L27 [Cellulomonas fimi ATCC 484]
Length=85
Score = 137 bits (344), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 69/81 (86%), Positives = 72/81 (89%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDS AQRLGVKR+GGQVVKAGEI+VRQRGT FHPG NVGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSNAQRLGVKRFGGQVVKAGEIIVRQRGTHFHPGNNVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A TAGAV F +RGRK V IV
Sbjct 61 ALTAGAVAFATRRGRKVVDIV 81
>gi|269794464|ref|YP_003313919.1| 50S ribosomal protein L27P [Sanguibacter keddieii DSM 10542]
gi|269096649|gb|ACZ21085.1| LSU ribosomal protein L27P [Sanguibacter keddieii DSM 10542]
Length=85
Score = 137 bits (344), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 67/81 (83%), Positives = 73/81 (91%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDS AQRLGVKR+GGQ+V AGEI+VRQRGT FHPG NVGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSNAQRLGVKRFGGQLVNAGEIIVRQRGTHFHPGNNVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A TAGAV+FG +RGRK + IV
Sbjct 61 ALTAGAVQFGTRRGRKVIDIV 81
>gi|227548741|ref|ZP_03978790.1| 50S ribosomal protein L27 [Corynebacterium lipophiloflavum DSM
44291]
gi|227079153|gb|EEI17116.1| 50S ribosomal protein L27 [Corynebacterium lipophiloflavum DSM
44291]
Length=114
Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/81 (83%), Positives = 74/81 (92%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSS NGRDS ++RLGVKR+GGQ VKAGEILVRQRGTKFHPG NVGRGGDDTLF
Sbjct 1 MAHKKGASSSSNGRDSESKRLGVKRFGGQQVKAGEILVRQRGTKFHPGDNVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A +AGAV+FGIKR R+ V+IV
Sbjct 61 ALSAGAVQFGIKRNRRIVNIV 81
>gi|134098001|ref|YP_001103662.1| 50S ribosomal protein L27 [Saccharopolyspora erythraea NRRL 2338]
gi|291007234|ref|ZP_06565207.1| 50S ribosomal protein L27 [Saccharopolyspora erythraea NRRL 2338]
gi|166225049|sp|A4F9L2.1|RL27_SACEN RecName: Full=50S ribosomal protein L27
gi|133910624|emb|CAM00737.1| 50S ribosomal protein L27 [Saccharopolyspora erythraea NRRL 2338]
Length=85
Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/81 (84%), Positives = 73/81 (91%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDS + LGVKR+GGQVVKAGEI+VRQRGTKFHPG+NVGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSNPKYLGVKRFGGQVVKAGEIIVRQRGTKFHPGLNVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A +AG VEFG R RKTVSIV
Sbjct 61 ALSAGTVEFGRTRNRKTVSIV 81
>gi|148272670|ref|YP_001222231.1| 50S ribosomal protein L27 [Clavibacter michiganensis subsp. michiganensis
NCPPB 382]
gi|166224986|sp|A5CR31.1|RL27_CLAM3 RecName: Full=50S ribosomal protein L27
gi|147830600|emb|CAN01536.1| 50S ribosomal protein L27 [Clavibacter michiganensis subsp. michiganensis
NCPPB 382]
Length=84
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/81 (83%), Positives = 75/81 (93%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASS+RNGRDS AQRLGVKR+GGQVV AGEI+VRQRGT FHPGVNVGRGGDDTLF
Sbjct 1 MAHKKGASSTRNGRDSNAQRLGVKRFGGQVVGAGEIIVRQRGTHFHPGVNVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A +AG+V+FG+K GRK V+IV
Sbjct 61 ALSAGSVQFGVKGGRKVVNIV 81
>gi|344999602|ref|YP_004802456.1| 50S ribosomal protein L27 [Streptomyces sp. SirexAA-E]
gi|320010851|gb|ADW05701.1| ribosomal protein L27 [Streptomyces flavogriseus ATCC 33331]
gi|344315228|gb|AEN09916.1| ribosomal protein L27 [Streptomyces sp. SirexAA-E]
Length=85
Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/81 (84%), Positives = 71/81 (88%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASS+RNGRDS AQRLGVKR+GGQ V AGEILVRQRGT FHPG VGRGGDDTLF
Sbjct 1 MAHKKGASSTRNGRDSNAQRLGVKRFGGQAVNAGEILVRQRGTHFHPGTGVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A TAGAVEFG RGRK V+IV
Sbjct 61 ALTAGAVEFGTHRGRKVVNIV 81
>gi|284990125|ref|YP_003408679.1| 50S ribosomal protein L27 [Geodermatophilus obscurus DSM 43160]
gi|284063370|gb|ADB74308.1| ribosomal protein L27 [Geodermatophilus obscurus DSM 43160]
Length=85
Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/80 (85%), Positives = 72/80 (90%), Gaps = 0/80 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDS AQRLGVKR+GGQVVKAGEI+VRQRGT FHPG+ VGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSNAQRLGVKRFGGQVVKAGEIIVRQRGTHFHPGLGVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSI 80
A GAV FG +RGRKTVSI
Sbjct 61 ALQPGAVTFGTRRGRKTVSI 80
>gi|325001210|ref|ZP_08122322.1| 50S ribosomal protein L27 [Pseudonocardia sp. P1]
Length=85
Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/81 (86%), Positives = 72/81 (89%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDS AQ LGVKR+GGQVVKAGEIL+RQRGT HPGVNVGRG DDTLF
Sbjct 1 MAHKKGASSSRNGRDSNAQYLGVKRFGGQVVKAGEILIRQRGTATHPGVNVGRGKDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A AG VEFG KRGRKTV+IV
Sbjct 61 ALAAGTVEFGSKRGRKTVNIV 81
>gi|239987579|ref|ZP_04708243.1| 50S ribosomal protein L27 [Streptomyces roseosporus NRRL 11379]
gi|291444541|ref|ZP_06583931.1| ribosomal protein L27 [Streptomyces roseosporus NRRL 15998]
gi|291347488|gb|EFE74392.1| ribosomal protein L27 [Streptomyces roseosporus NRRL 15998]
Length=85
Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/81 (84%), Positives = 71/81 (88%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASS+RNGRDS AQRLGVKR+GGQ V AGEILVRQRGT FHPG VGRGGDDTLF
Sbjct 1 MAHKKGASSTRNGRDSNAQRLGVKRFGGQAVNAGEILVRQRGTHFHPGAGVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A TAGAVEFG RGRK V+IV
Sbjct 61 ALTAGAVEFGTHRGRKVVNIV 81
>gi|297199639|ref|ZP_06917036.1| ribosomal protein L27 [Streptomyces sviceus ATCC 29083]
gi|197713433|gb|EDY57467.1| ribosomal protein L27 [Streptomyces sviceus ATCC 29083]
Length=84
Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/81 (84%), Positives = 71/81 (88%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASS+RNGRDS AQRLGVKR+GGQVV AGEILVRQRGT FHPG VGRGGDDTLF
Sbjct 1 MAHKKGASSTRNGRDSNAQRLGVKRFGGQVVNAGEILVRQRGTHFHPGAGVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A AGAVEFG RGRK V+IV
Sbjct 61 ALNAGAVEFGTHRGRKVVNIV 81
>gi|227504026|ref|ZP_03934075.1| 50S ribosomal protein L27 [Corynebacterium striatum ATCC 6940]
gi|227199356|gb|EEI79404.1| 50S ribosomal protein L27 [Corynebacterium striatum ATCC 6940]
Length=92
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/86 (78%), Positives = 74/86 (87%), Gaps = 0/86 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSS NGRDS ++RLGVKR+GGQ VKAGEI+VRQRGTKFHPG NVGRGGDDTLF
Sbjct 1 MAHKKGASSSSNGRDSESKRLGVKRFGGQQVKAGEIIVRQRGTKFHPGENVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIVGSTTA 86
A AGAVEF IKR R+ V+IV + A
Sbjct 61 ALEAGAVEFAIKRNRRIVNIVPAEQA 86
>gi|72162580|ref|YP_290237.1| 50S ribosomal protein L27 [Thermobifida fusca YX]
gi|123629049|sp|Q47MV5.1|RL27_THEFY RecName: Full=50S ribosomal protein L27
gi|71916312|gb|AAZ56214.1| LSU ribosomal protein L27P [Thermobifida fusca YX]
Length=88
Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/86 (80%), Positives = 74/86 (87%), Gaps = 0/86 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSSRNGRDS A+RLGVKR+GGQ VKAGEILVRQRGT+FHPG NVGRGGDDTLF
Sbjct 1 MAHKKGASSSRNGRDSNAKRLGVKRFGGQYVKAGEILVRQRGTRFHPGDNVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIVGSTTA 86
A AG VEFG RGRK VS++ + A
Sbjct 61 ALVAGRVEFGNLRGRKAVSVIPTPVA 86
>gi|291439688|ref|ZP_06579078.1| 50S ribosomal protein L27 [Streptomyces ghanaensis ATCC 14672]
gi|291342583|gb|EFE69539.1| 50S ribosomal protein L27 [Streptomyces ghanaensis ATCC 14672]
Length=84
Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/81 (84%), Positives = 71/81 (88%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASS+RNGRDS AQRLGVKR+GGQVV AGEILVRQRGT FHPG VGRGGDDTLF
Sbjct 1 MAHKKGASSTRNGRDSNAQRLGVKRFGGQVVSAGEILVRQRGTHFHPGAGVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A AGAVEFG RGRK V+IV
Sbjct 61 ALQAGAVEFGTSRGRKVVNIV 81
>gi|225021684|ref|ZP_03710876.1| hypothetical protein CORMATOL_01712 [Corynebacterium matruchotii
ATCC 33806]
gi|305680986|ref|ZP_07403793.1| ribosomal protein L27 [Corynebacterium matruchotii ATCC 14266]
gi|224945675|gb|EEG26884.1| hypothetical protein CORMATOL_01712 [Corynebacterium matruchotii
ATCC 33806]
gi|305659191|gb|EFM48691.1| ribosomal protein L27 [Corynebacterium matruchotii ATCC 14266]
Length=89
Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/81 (83%), Positives = 73/81 (91%), Gaps = 0/81 (0%)
Query 1 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLF 60
MAHKKGASSS NGRDS A+RLGVKRYGGQ VKAGEILVRQRGTKFHPG NVGRGGDDTLF
Sbjct 1 MAHKKGASSSSNGRDSNAKRLGVKRYGGQQVKAGEILVRQRGTKFHPGENVGRGGDDTLF 60
Query 61 AKTAGAVEFGIKRGRKTVSIV 81
A AGAV+F ++R R+TV+IV
Sbjct 61 ALKAGAVKFAMRRNRRTVNIV 81
Lambda K H
0.315 0.133 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 131009627400
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40