BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2442c
Length=104
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609579|ref|NP_216958.1| 50S ribosomal protein L21 [Mycobact... 203 5e-51
gi|167969765|ref|ZP_02552042.1| 50S ribosomal protein L21 [Mycob... 201 3e-50
gi|342857841|ref|ZP_08714497.1| 50S ribosomal protein L21 [Mycob... 186 1e-45
gi|240170914|ref|ZP_04749573.1| 50S ribosomal protein L21 [Mycob... 186 1e-45
gi|118618975|ref|YP_907307.1| 50S ribosomal protein L21 [Mycobac... 185 2e-45
gi|254819833|ref|ZP_05224834.1| 50S ribosomal protein L21 [Mycob... 184 4e-45
gi|41408364|ref|NP_961200.1| 50S ribosomal protein L21 [Mycobact... 183 6e-45
gi|333990104|ref|YP_004522718.1| 50S ribosomal protein L21 RplU ... 182 1e-44
gi|15827769|ref|NP_302032.1| 50S ribosomal protein L21 [Mycobact... 182 2e-44
gi|296170490|ref|ZP_06852077.1| 50S ribosomal protein L21 [Mycob... 180 5e-44
gi|108800516|ref|YP_640713.1| 50S ribosomal protein L21 [Mycobac... 178 2e-43
gi|145223222|ref|YP_001133900.1| 50S ribosomal protein L21 [Myco... 178 2e-43
gi|120404900|ref|YP_954729.1| 50S ribosomal protein L21 [Mycobac... 177 4e-43
gi|169628700|ref|YP_001702349.1| 50s ribosomal protein L21 [Myco... 177 5e-43
gi|118473704|ref|YP_888889.1| 50S ribosomal protein L21 [Mycobac... 176 1e-42
gi|262201996|ref|YP_003273204.1| 50S ribosomal protein L21 [Gord... 169 1e-40
gi|326382840|ref|ZP_08204530.1| 50S ribosomal protein L21 [Gordo... 169 1e-40
gi|296139196|ref|YP_003646439.1| 50S ribosomal protein L21 [Tsuk... 169 1e-40
gi|343925343|ref|ZP_08764868.1| 50S ribosomal protein L21 [Gordo... 167 6e-40
gi|111018323|ref|YP_701295.1| 50S ribosomal protein L21 [Rhodoco... 164 4e-39
gi|312140344|ref|YP_004007680.1| 50S ribosomal protein l21 rplu ... 164 5e-39
gi|333918794|ref|YP_004492375.1| 50S ribosomal protein L21 [Amyc... 161 3e-38
gi|226307281|ref|YP_002767241.1| 50S ribosomal protein L21 [Rhod... 161 3e-38
gi|317507078|ref|ZP_07964840.1| ribosomal prokaryotic L21 protei... 158 3e-37
gi|54023320|ref|YP_117562.1| 50S ribosomal protein L21 [Nocardia... 156 1e-36
gi|302528914|ref|ZP_07281256.1| ribosomal protein L21 [Streptomy... 153 7e-36
gi|134098000|ref|YP_001103661.1| 50S ribosomal protein L21 [Sacc... 151 2e-35
gi|319948145|ref|ZP_08022308.1| 50S ribosomal protein L21 [Dietz... 151 3e-35
gi|300788543|ref|YP_003768834.1| 50S ribosomal protein L21 [Amyc... 150 4e-35
gi|296394161|ref|YP_003659045.1| 50S ribosomal protein L21 [Segn... 150 5e-35
gi|257055294|ref|YP_003133126.1| 50S ribosomal protein L21P [Sac... 147 6e-34
gi|256375325|ref|YP_003098985.1| 50S ribosomal protein L21 [Acti... 146 8e-34
gi|331695830|ref|YP_004332069.1| 50S ribosomal protein L21 [Pseu... 145 2e-33
gi|86739927|ref|YP_480327.1| 50S ribosomal protein L21 [Frankia ... 142 2e-32
gi|291302926|ref|YP_003514204.1| 50S ribosomal protein L21 [Stac... 142 2e-32
gi|258651735|ref|YP_003200891.1| 50S ribosomal protein L21 [Naka... 142 2e-32
gi|145595993|ref|YP_001160290.1| 50S ribosomal protein L21 [Sali... 141 3e-32
gi|302869336|ref|YP_003837973.1| 50S ribosomal protein L21 [Micr... 141 4e-32
gi|159039390|ref|YP_001538643.1| 50S ribosomal protein L21 [Sali... 140 7e-32
gi|238060597|ref|ZP_04605306.1| 50S ribosomal protein L21 [Micro... 140 8e-32
gi|330469630|ref|YP_004407373.1| 50S ribosomal protein L21 [Verr... 139 1e-31
gi|300859009|ref|YP_003783992.1| 50S ribosomal protein L21 [Cory... 138 3e-31
gi|158317016|ref|YP_001509524.1| 50S ribosomal protein L21 [Fran... 138 3e-31
gi|337291352|ref|YP_004630373.1| 50S ribosomal protein L21 [Cory... 137 4e-31
gi|302331260|gb|ADL21454.1| 50S ribosomal protein L21 [Corynebac... 137 5e-31
gi|25028827|ref|NP_738881.1| 50S ribosomal protein L21 [Coryneba... 136 1e-30
gi|325001211|ref|ZP_08122323.1| 50S ribosomal protein L21 [Pseud... 136 1e-30
gi|38234352|ref|NP_940119.1| 50S ribosomal protein L21 [Coryneba... 136 1e-30
gi|225021683|ref|ZP_03710875.1| hypothetical protein CORMATOL_01... 135 2e-30
gi|19553562|ref|NP_601564.1| 50S ribosomal protein L21 [Coryneba... 135 2e-30
>gi|15609579|ref|NP_216958.1| 50S ribosomal protein L21 [Mycobacterium tuberculosis H37Rv]
gi|15841964|ref|NP_337001.1| 50S ribosomal protein L21 [Mycobacterium tuberculosis CDC1551]
gi|31793623|ref|NP_856116.1| 50S ribosomal protein L21 [Mycobacterium bovis AF2122/97]
71 more sequence titles
Length=104
Score = 203 bits (517), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 104/104 (100%), Positives = 104/104 (100%), Gaps = 0/104 (0%)
Query 1 MMATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVA 60
MMATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVA
Sbjct 1 MMATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVA 60
Query 61 VTGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGIA 104
VTGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGIA
Sbjct 61 VTGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGIA 104
>gi|167969765|ref|ZP_02552042.1| 50S ribosomal protein L21 [Mycobacterium tuberculosis H37Ra]
gi|254551492|ref|ZP_05141939.1| 50S ribosomal protein L21 [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289553766|ref|ZP_06442976.1| 50S ribosomal protein L21 rplU [Mycobacterium tuberculosis KZN
605]
8 more sequence titles
Length=103
Score = 201 bits (511), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/103 (100%), Positives = 103/103 (100%), Gaps = 0/103 (0%)
Query 2 MATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAV 61
MATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAV
Sbjct 1 MATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAV 60
Query 62 TGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGIA 104
TGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGIA
Sbjct 61 TGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGIA 103
>gi|342857841|ref|ZP_08714497.1| 50S ribosomal protein L21 [Mycobacterium colombiense CECT 3035]
gi|342135174|gb|EGT88340.1| 50S ribosomal protein L21 [Mycobacterium colombiense CECT 3035]
Length=103
Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/102 (94%), Positives = 96/102 (95%), Gaps = 0/102 (0%)
Query 2 MATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAV 61
MATYAIVKTGGKQYKVAVGDVVKVEKLESE G VSLPVALVVDGA VTTDA ALAKVAV
Sbjct 1 MATYAIVKTGGKQYKVAVGDVVKVEKLESEPGSNVSLPVALVVDGAKVTTDAAALAKVAV 60
Query 62 TGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
TGEVL HTKGPKIRIHKF+NKTGYHKRQGHRQQLTVLKVTGI
Sbjct 61 TGEVLEHTKGPKIRIHKFRNKTGYHKRQGHRQQLTVLKVTGI 102
>gi|240170914|ref|ZP_04749573.1| 50S ribosomal protein L21 [Mycobacterium kansasii ATCC 12478]
Length=103
Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/102 (94%), Positives = 97/102 (96%), Gaps = 0/102 (0%)
Query 2 MATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAV 61
MATYAIVKTGGKQYKVAVGDVVKVEKLES+ G KVSLPVALVVDGATVT+DA ALAKVAV
Sbjct 1 MATYAIVKTGGKQYKVAVGDVVKVEKLESDPGAKVSLPVALVVDGATVTSDANALAKVAV 60
Query 62 TGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
TGEVL H KGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI
Sbjct 61 TGEVLEHVKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 102
>gi|118618975|ref|YP_907307.1| 50S ribosomal protein L21 [Mycobacterium ulcerans Agy99]
gi|183983747|ref|YP_001852038.1| 50S ribosomal protein L21 RplU [Mycobacterium marinum M]
gi|166986899|sp|A0PU17.1|RL21_MYCUA RecName: Full=50S ribosomal protein L21
gi|226733350|sp|B2HMG3.1|RL21_MYCMM RecName: Full=50S ribosomal protein L21
gi|118571085|gb|ABL05836.1| 50S ribosomal protein L21 RplU [Mycobacterium ulcerans Agy99]
gi|183177073|gb|ACC42183.1| 50S ribosomal protein L21 RplU [Mycobacterium marinum M]
Length=103
Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/102 (94%), Positives = 96/102 (95%), Gaps = 0/102 (0%)
Query 2 MATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAV 61
MATYAIVKTGGKQYKVAVGDVVKVEKLESE G KVSLPVALVVDGA VT+DA ALAKVAV
Sbjct 1 MATYAIVKTGGKQYKVAVGDVVKVEKLESEPGAKVSLPVALVVDGAAVTSDADALAKVAV 60
Query 62 TGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
TGEVL H KGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI
Sbjct 61 TGEVLEHVKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 102
>gi|254819833|ref|ZP_05224834.1| 50S ribosomal protein L21 [Mycobacterium intracellulare ATCC
13950]
Length=103
Score = 184 bits (467), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 94/102 (93%), Positives = 96/102 (95%), Gaps = 0/102 (0%)
Query 2 MATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAV 61
MATYAIVKTGGKQYKVAVGDVVKVEKL+SE G VSLPVALVVDGA VTTDA ALAKVAV
Sbjct 1 MATYAIVKTGGKQYKVAVGDVVKVEKLDSEPGSNVSLPVALVVDGAKVTTDAAALAKVAV 60
Query 62 TGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
TGEVL HTKGPKIRIHKF+NKTGYHKRQGHRQQLTVLKVTGI
Sbjct 61 TGEVLEHTKGPKIRIHKFRNKTGYHKRQGHRQQLTVLKVTGI 102
>gi|41408364|ref|NP_961200.1| 50S ribosomal protein L21 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118465878|ref|YP_880956.1| 50S ribosomal protein L21 [Mycobacterium avium 104]
gi|254774545|ref|ZP_05216061.1| 50S ribosomal protein L21 [Mycobacterium avium subsp. avium ATCC
25291]
gi|81700534|sp|Q73XP3.1|RL21_MYCPA RecName: Full=50S ribosomal protein L21
gi|166986894|sp|A0QDG8.1|RL21_MYCA1 RecName: Full=50S ribosomal protein L21
gi|41396720|gb|AAS04583.1| RplU [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118167165|gb|ABK68062.1| ribosomal protein L21 [Mycobacterium avium 104]
gi|336458198|gb|EGO37179.1| ribosomal protein L21 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=103
Score = 183 bits (465), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 93/102 (92%), Positives = 96/102 (95%), Gaps = 0/102 (0%)
Query 2 MATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAV 61
MATYAIVKTGGKQYKVAVGDVVKVEKL+SE G VSLPVALVVDGA VT+DA ALAKVAV
Sbjct 1 MATYAIVKTGGKQYKVAVGDVVKVEKLDSEPGSNVSLPVALVVDGAKVTSDAAALAKVAV 60
Query 62 TGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
TGEVL HTKGPKIRIHKF+NKTGYHKRQGHRQQLTVLKVTGI
Sbjct 61 TGEVLEHTKGPKIRIHKFRNKTGYHKRQGHRQQLTVLKVTGI 102
>gi|333990104|ref|YP_004522718.1| 50S ribosomal protein L21 RplU [Mycobacterium sp. JDM601]
gi|333486072|gb|AEF35464.1| 50S ribosomal protein L21 RplU [Mycobacterium sp. JDM601]
Length=103
Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/102 (93%), Positives = 95/102 (94%), Gaps = 0/102 (0%)
Query 2 MATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAV 61
MATYAIVKTGGKQYKVAVGDVVKVEKL+SE G VSLPVALVVDG TVTTDA LAKVAV
Sbjct 1 MATYAIVKTGGKQYKVAVGDVVKVEKLDSEPGSSVSLPVALVVDGTTVTTDAGKLAKVAV 60
Query 62 TGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
TGEVL HTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI
Sbjct 61 TGEVLEHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 102
>gi|15827769|ref|NP_302032.1| 50S ribosomal protein L21 [Mycobacterium leprae TN]
gi|221230246|ref|YP_002503662.1| 50S ribosomal protein L21 [Mycobacterium leprae Br4923]
gi|13633836|sp|Q9CBZ2.1|RL21_MYCLE RecName: Full=50S ribosomal protein L21
gi|254800392|sp|B8ZRN5.1|RL21_MYCLB RecName: Full=50S ribosomal protein L21
gi|13093321|emb|CAC30417.1| 50S ribosomal protein L21 [Mycobacterium leprae]
gi|219933353|emb|CAR71561.1| 50S ribosomal protein L21 [Mycobacterium leprae Br4923]
Length=103
Score = 182 bits (461), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/102 (92%), Positives = 97/102 (96%), Gaps = 0/102 (0%)
Query 2 MATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAV 61
MATYAIVKTGGKQYKVAVGDVVK+EKL+ E G KVSLPV LVVDGATVTT+AKALAKVAV
Sbjct 1 MATYAIVKTGGKQYKVAVGDVVKIEKLDFEPGAKVSLPVTLVVDGATVTTNAKALAKVAV 60
Query 62 TGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
TG+VL HTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI
Sbjct 61 TGKVLEHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 102
>gi|296170490|ref|ZP_06852077.1| 50S ribosomal protein L21 [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295894842|gb|EFG74564.1| 50S ribosomal protein L21 [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=103
Score = 180 bits (457), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 92/102 (91%), Positives = 95/102 (94%), Gaps = 0/102 (0%)
Query 2 MATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAV 61
MATYAIVKTGGKQYKVAVGDVVKVEKL+S+ G VSLPV LVVDGA VTTDA ALAKVAV
Sbjct 1 MATYAIVKTGGKQYKVAVGDVVKVEKLDSDPGANVSLPVTLVVDGAKVTTDAAALAKVAV 60
Query 62 TGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
TGEVL HTKGPKIRIHKF+NKTGYHKRQGHRQQLTVLKVTGI
Sbjct 61 TGEVLEHTKGPKIRIHKFRNKTGYHKRQGHRQQLTVLKVTGI 102
>gi|108800516|ref|YP_640713.1| 50S ribosomal protein L21 [Mycobacterium sp. MCS]
gi|119869655|ref|YP_939607.1| 50S ribosomal protein L21 [Mycobacterium sp. KMS]
gi|126436132|ref|YP_001071823.1| 50S ribosomal protein L21 [Mycobacterium sp. JLS]
6 more sequence titles
Length=103
Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/102 (90%), Positives = 95/102 (94%), Gaps = 0/102 (0%)
Query 2 MATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAV 61
MA+YAIVKTGGKQYKVAVGDVVKVEKL+SE G VSLPVALVVDGA VT+ A+ LAKVAV
Sbjct 1 MASYAIVKTGGKQYKVAVGDVVKVEKLDSEPGASVSLPVALVVDGANVTSKAEDLAKVAV 60
Query 62 TGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
TGEVL HTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI
Sbjct 61 TGEVLEHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 102
>gi|145223222|ref|YP_001133900.1| 50S ribosomal protein L21 [Mycobacterium gilvum PYR-GCK]
gi|315443680|ref|YP_004076559.1| 50S ribosomal protein L21P [Mycobacterium sp. Spyr1]
gi|145215708|gb|ABP45112.1| LSU ribosomal protein L21P [Mycobacterium gilvum PYR-GCK]
gi|315261983|gb|ADT98724.1| LSU ribosomal protein L21P [Mycobacterium sp. Spyr1]
Length=107
Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/101 (91%), Positives = 93/101 (93%), Gaps = 0/101 (0%)
Query 3 ATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAVT 62
ATYAIVKTGGKQYKVA GD+VKVEKL+ E G VSLPVALVVDGA VTTDAKAL KVAVT
Sbjct 6 ATYAIVKTGGKQYKVAAGDIVKVEKLDVEPGASVSLPVALVVDGANVTTDAKALEKVAVT 65
Query 63 GEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
GEVL HTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI
Sbjct 66 GEVLEHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 106
>gi|120404900|ref|YP_954729.1| 50S ribosomal protein L21 [Mycobacterium vanbaalenii PYR-1]
gi|119957718|gb|ABM14723.1| LSU ribosomal protein L21P [Mycobacterium vanbaalenii PYR-1]
Length=107
Score = 177 bits (449), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/101 (91%), Positives = 93/101 (93%), Gaps = 0/101 (0%)
Query 3 ATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAVT 62
ATYAIVKTGGKQYKVA GD+VKVEKL+ E G VSLPVALVVDGA VTTDAKAL KVAVT
Sbjct 6 ATYAIVKTGGKQYKVAAGDIVKVEKLDVEPGASVSLPVALVVDGAKVTTDAKALEKVAVT 65
Query 63 GEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
GEVL HTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI
Sbjct 66 GEVLEHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 106
>gi|169628700|ref|YP_001702349.1| 50s ribosomal protein L21 [Mycobacterium abscessus ATCC 19977]
gi|226733348|sp|B1MMY3.1|RL21_MYCA9 RecName: Full=50S ribosomal protein L21
gi|169240667|emb|CAM61695.1| 50s ribosomal protein L21 [Mycobacterium abscessus]
Length=103
Score = 177 bits (449), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 89/102 (88%), Positives = 95/102 (94%), Gaps = 0/102 (0%)
Query 2 MATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAV 61
MATYAIVKTGGKQYKVAVGD+VKVEK++SE G V LPVALVVDGATVTTDA LAKVAV
Sbjct 1 MATYAIVKTGGKQYKVAVGDLVKVEKIDSEPGSSVQLPVALVVDGATVTTDADKLAKVAV 60
Query 62 TGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
TGE++ HTKGPKIRIHKFKNKTGYHKRQGHRQ+LTVLKVTGI
Sbjct 61 TGEIVEHTKGPKIRIHKFKNKTGYHKRQGHRQRLTVLKVTGI 102
>gi|118473704|ref|YP_888889.1| 50S ribosomal protein L21 [Mycobacterium smegmatis str. MC2 155]
gi|166986895|sp|A0R151.1|RL21_MYCS2 RecName: Full=50S ribosomal protein L21
gi|118174991|gb|ABK75887.1| ribosomal protein L21 [Mycobacterium smegmatis str. MC2 155]
Length=103
Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/102 (89%), Positives = 92/102 (91%), Gaps = 0/102 (0%)
Query 2 MATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAV 61
MATYAIVKTGGKQYKVA GDVVKVEKL+SE G VSLPVALVVDGA VT+ A LAKVAV
Sbjct 1 MATYAIVKTGGKQYKVAAGDVVKVEKLDSEPGASVSLPVALVVDGANVTSKADDLAKVAV 60
Query 62 TGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
T EVL HTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI
Sbjct 61 TAEVLEHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 102
>gi|262201996|ref|YP_003273204.1| 50S ribosomal protein L21 [Gordonia bronchialis DSM 43247]
gi|262085343|gb|ACY21311.1| ribosomal protein L21 [Gordonia bronchialis DSM 43247]
Length=103
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/102 (83%), Positives = 93/102 (92%), Gaps = 0/102 (0%)
Query 2 MATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAV 61
MATYAIVKTGGKQYKVA GD+VKVEK++ E G VSLPVALVVDG+T+TTDA LAK++V
Sbjct 1 MATYAIVKTGGKQYKVAEGDIVKVEKIDGEPGSTVSLPVALVVDGSTLTTDADKLAKISV 60
Query 62 TGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
TGEV+ H KGPKIRIHKFKNKTGYHKRQGHRQ+LTVLKVTGI
Sbjct 61 TGEVVEHVKGPKIRIHKFKNKTGYHKRQGHRQKLTVLKVTGI 102
>gi|326382840|ref|ZP_08204530.1| 50S ribosomal protein L21 [Gordonia neofelifaecis NRRL B-59395]
gi|326198430|gb|EGD55614.1| 50S ribosomal protein L21 [Gordonia neofelifaecis NRRL B-59395]
Length=103
Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/102 (84%), Positives = 91/102 (90%), Gaps = 0/102 (0%)
Query 2 MATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAV 61
MATYAIVKTGGKQYKVA GD+VKVEK++ E G V LPVALVVDGA +TTDA LA V+V
Sbjct 1 MATYAIVKTGGKQYKVAEGDIVKVEKIDGEPGSTVQLPVALVVDGANLTTDADKLAAVSV 60
Query 62 TGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
TGEV+ HTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI
Sbjct 61 TGEVVEHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 102
>gi|296139196|ref|YP_003646439.1| 50S ribosomal protein L21 [Tsukamurella paurometabola DSM 20162]
gi|296027330|gb|ADG78100.1| ribosomal protein L21 [Tsukamurella paurometabola DSM 20162]
Length=103
Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/103 (82%), Positives = 92/103 (90%), Gaps = 0/103 (0%)
Query 2 MATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAV 61
MATYAIVKTGGKQYKVAVGD+VKVEK++ E G V LPVALVVDGA +TTDA AL K++V
Sbjct 1 MATYAIVKTGGKQYKVAVGDLVKVEKIDGELGSSVKLPVALVVDGANLTTDAAALEKISV 60
Query 62 TGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGIA 104
TGEV+ H KGPKIRIHKFKNKTGYHKRQGHRQ+LTVLKVT IA
Sbjct 61 TGEVVDHVKGPKIRIHKFKNKTGYHKRQGHRQKLTVLKVTAIA 103
>gi|343925343|ref|ZP_08764868.1| 50S ribosomal protein L21 [Gordonia alkanivorans NBRC 16433]
gi|343764782|dbj|GAA11794.1| 50S ribosomal protein L21 [Gordonia alkanivorans NBRC 16433]
Length=103
Score = 167 bits (422), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 83/102 (82%), Positives = 92/102 (91%), Gaps = 0/102 (0%)
Query 2 MATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAV 61
MATYAIVKTGGKQYKVA GD+VKVEK++ E G VSLPVALVVDG+ +TTDA LAK++V
Sbjct 1 MATYAIVKTGGKQYKVAEGDIVKVEKIDGEIGATVSLPVALVVDGSNLTTDADKLAKISV 60
Query 62 TGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
TGEV+ H KGPKIRIHKFKNKTGYHKRQGHRQ+LTVLKVTGI
Sbjct 61 TGEVVEHVKGPKIRIHKFKNKTGYHKRQGHRQKLTVLKVTGI 102
>gi|111018323|ref|YP_701295.1| 50S ribosomal protein L21 [Rhodococcus jostii RHA1]
gi|226360449|ref|YP_002778227.1| 50S ribosomal protein L21 [Rhodococcus opacus B4]
gi|122069606|sp|Q0SH49.1|RL21_RHOSR RecName: Full=50S ribosomal protein L21
gi|254800397|sp|C1AVK2.1|RL21_RHOOB RecName: Full=50S ribosomal protein L21
gi|110817853|gb|ABG93137.1| 50S ribosomal protein L21 [Rhodococcus jostii RHA1]
gi|226238934|dbj|BAH49282.1| 50S ribosomal protein L21 [Rhodococcus opacus B4]
Length=103
Score = 164 bits (415), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/102 (82%), Positives = 91/102 (90%), Gaps = 0/102 (0%)
Query 2 MATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAV 61
MATYAIVKTGGKQYKVAVGD+VKVEK+E E G VSL LVVDG+ +TTDA LAK++V
Sbjct 1 MATYAIVKTGGKQYKVAVGDLVKVEKIEGEPGTAVSLAPVLVVDGSDLTTDADKLAKISV 60
Query 62 TGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
TGEV+ HTKGPKIRIHKFKNKTGYHKRQGHRQ+LTVLKVTGI
Sbjct 61 TGEVVEHTKGPKIRIHKFKNKTGYHKRQGHRQKLTVLKVTGI 102
>gi|312140344|ref|YP_004007680.1| 50S ribosomal protein l21 rplu [Rhodococcus equi 103S]
gi|325677080|ref|ZP_08156749.1| 50S ribosomal protein L21 [Rhodococcus equi ATCC 33707]
gi|311889683|emb|CBH49000.1| 50S ribosomal protein L21 RplU [Rhodococcus equi 103S]
gi|325552065|gb|EGD21758.1| 50S ribosomal protein L21 [Rhodococcus equi ATCC 33707]
Length=103
Score = 164 bits (414), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 83/102 (82%), Positives = 91/102 (90%), Gaps = 0/102 (0%)
Query 2 MATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAV 61
MATYAIVKTGGKQYKVAVGD+VKVEK+E E G VSL LVVDG+ +TTDA LAK++V
Sbjct 1 MATYAIVKTGGKQYKVAVGDLVKVEKIEGEPGTAVSLAPVLVVDGSELTTDADKLAKISV 60
Query 62 TGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
TGEV+ HTKGPKIRIHKFKNKTGYHKRQGHRQ+LTVLKVTGI
Sbjct 61 TGEVVEHTKGPKIRIHKFKNKTGYHKRQGHRQKLTVLKVTGI 102
>gi|333918794|ref|YP_004492375.1| 50S ribosomal protein L21 [Amycolicicoccus subflavus DQS3-9A1]
gi|333481015|gb|AEF39575.1| 50S ribosomal protein L21 [Amycolicicoccus subflavus DQS3-9A1]
Length=102
Score = 161 bits (408), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/99 (83%), Positives = 88/99 (89%), Gaps = 0/99 (0%)
Query 5 YAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAVTGE 64
YAIVKTGGKQYKVAVGD+VKVEK+E G V LPVALVV+GA VT+DA ALAK VTGE
Sbjct 2 YAIVKTGGKQYKVAVGDLVKVEKIEGAPGTAVELPVALVVNGAEVTSDAAALAKATVTGE 61
Query 65 VLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
V+ HTKGPKIRIHKFKNKTGYHKRQGHRQ+LTVLKVTGI
Sbjct 62 VVEHTKGPKIRIHKFKNKTGYHKRQGHRQKLTVLKVTGI 100
>gi|226307281|ref|YP_002767241.1| 50S ribosomal protein L21 [Rhodococcus erythropolis PR4]
gi|229493200|ref|ZP_04386992.1| ribosomal protein L21 [Rhodococcus erythropolis SK121]
gi|259646223|sp|C1A1L7.1|RL21_RHOE4 RecName: Full=50S ribosomal protein L21
gi|226186398|dbj|BAH34502.1| 50S ribosomal protein L21 [Rhodococcus erythropolis PR4]
gi|229319931|gb|EEN85760.1| ribosomal protein L21 [Rhodococcus erythropolis SK121]
Length=103
Score = 161 bits (408), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/102 (81%), Positives = 89/102 (88%), Gaps = 0/102 (0%)
Query 2 MATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAV 61
MATYAIVKTGGKQYKVAVGD+VKVEK+E E G VSL LVVDG+ +TTDA LAKVAV
Sbjct 1 MATYAIVKTGGKQYKVAVGDLVKVEKIEGEPGTAVSLAPVLVVDGSDLTTDAAKLAKVAV 60
Query 62 TGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
T E++ HTKGPKIRIHKFKNKTGYHKRQGHRQ +TVLKVTGI
Sbjct 61 TSEIVEHTKGPKIRIHKFKNKTGYHKRQGHRQPITVLKVTGI 102
>gi|317507078|ref|ZP_07964840.1| ribosomal prokaryotic L21 protein [Segniliparus rugosus ATCC
BAA-974]
gi|316254621|gb|EFV13929.1| ribosomal prokaryotic L21 protein [Segniliparus rugosus ATCC
BAA-974]
Length=103
Score = 158 bits (399), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/103 (79%), Positives = 86/103 (84%), Gaps = 0/103 (0%)
Query 2 MATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAV 61
MATYA+VKTGGKQYKVAVGDVV VEKLE E G VSL L+ DG+TVTT A ALAK V
Sbjct 1 MATYAVVKTGGKQYKVAVGDVVSVEKLEGEPGAAVSLTPVLIADGSTVTTKADALAKAKV 60
Query 62 TGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGIA 104
T EV+ HTKGPKIRIH FKNKTGYH+RQGHRQ LTVLKVTGIA
Sbjct 61 TAEVVEHTKGPKIRIHHFKNKTGYHRRQGHRQPLTVLKVTGIA 103
>gi|54023320|ref|YP_117562.1| 50S ribosomal protein L21 [Nocardia farcinica IFM 10152]
gi|81680220|sp|Q5Z043.1|RL21_NOCFA RecName: Full=50S ribosomal protein L21
gi|54014828|dbj|BAD56198.1| putative ribosomal protein L21 [Nocardia farcinica IFM 10152]
Length=103
Score = 156 bits (394), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/102 (79%), Positives = 88/102 (87%), Gaps = 0/102 (0%)
Query 2 MATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAV 61
MATYAIVKTGGKQYKVAVGD+VKVEK+E E G V L LVVDGA +TT+A+ALAK +V
Sbjct 1 MATYAIVKTGGKQYKVAVGDLVKVEKIEGEPGAAVELSPVLVVDGAELTTEAEALAKRSV 60
Query 62 TGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
T E++ TKGPKIRIHKFKNKTGYHKRQGHRQ LTVLKVTGI
Sbjct 61 TAELVEQTKGPKIRIHKFKNKTGYHKRQGHRQPLTVLKVTGI 102
>gi|302528914|ref|ZP_07281256.1| ribosomal protein L21 [Streptomyces sp. AA4]
gi|302437809|gb|EFL09625.1| ribosomal protein L21 [Streptomyces sp. AA4]
Length=104
Score = 153 bits (387), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 77/103 (75%), Positives = 88/103 (86%), Gaps = 0/103 (0%)
Query 2 MATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAV 61
M+ YAIVKTGGKQYKVAVGDVV+VEKLE E G + + P L VDG VTTDA ALAKV+V
Sbjct 1 MSAYAIVKTGGKQYKVAVGDVVEVEKLEGEPGTEHTFPAVLFVDGGEVTTDADALAKVSV 60
Query 62 TGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGIA 104
TG+V+ TKGPKIRIHKFKNKTGYHKRQGHRQ+LT ++VTGI+
Sbjct 61 TGKVVEQTKGPKIRIHKFKNKTGYHKRQGHRQKLTRVEVTGIS 103
>gi|134098000|ref|YP_001103661.1| 50S ribosomal protein L21 [Saccharopolyspora erythraea NRRL 2338]
gi|291007235|ref|ZP_06565208.1| 50S ribosomal protein L21 [Saccharopolyspora erythraea NRRL 2338]
gi|166986933|sp|A4F9L1.1|RL21_SACEN RecName: Full=50S ribosomal protein L21
gi|133910623|emb|CAM00736.1| 50S ribosomal protein L21 [Saccharopolyspora erythraea NRRL 2338]
Length=102
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/99 (76%), Positives = 87/99 (88%), Gaps = 0/99 (0%)
Query 5 YAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAVTGE 64
YAIVKTGGKQYKVAVGDVV+VEKLE E G +V+ P L+VDG+ VT DA ALAKV+VTG+
Sbjct 2 YAIVKTGGKQYKVAVGDVVEVEKLEGEPGSEVTFPALLLVDGSDVTADADALAKVSVTGK 61
Query 65 VLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
++ TKGPKIRIHKFKNKTGYHKRQGHRQ+LT ++VTGI
Sbjct 62 LVEQTKGPKIRIHKFKNKTGYHKRQGHRQKLTRVEVTGI 100
>gi|319948145|ref|ZP_08022308.1| 50S ribosomal protein L21 [Dietzia cinnamea P4]
gi|319438213|gb|EFV93170.1| 50S ribosomal protein L21 [Dietzia cinnamea P4]
Length=101
Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/99 (77%), Positives = 85/99 (86%), Gaps = 0/99 (0%)
Query 5 YAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAVTGE 64
YAIVKTGGKQYKVA GD VKVEK+E E G VSL LVVDG+ VT+DA ALAKV V+GE
Sbjct 2 YAIVKTGGKQYKVAEGDQVKVEKIEGEAGTSVSLSPILVVDGSAVTSDADALAKVTVSGE 61
Query 65 VLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
++ TKGPKIRIHKFKNKTGYHKRQGHRQ+LTV+K+TGI
Sbjct 62 IVEQTKGPKIRIHKFKNKTGYHKRQGHRQKLTVVKITGI 100
>gi|300788543|ref|YP_003768834.1| 50S ribosomal protein L21 [Amycolatopsis mediterranei U32]
gi|299798057|gb|ADJ48432.1| large subunit ribosomal protein L21 [Amycolatopsis mediterranei
U32]
gi|340530148|gb|AEK45353.1| 50S ribosomal protein L21 [Amycolatopsis mediterranei S699]
Length=104
Score = 150 bits (380), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 77/103 (75%), Positives = 87/103 (85%), Gaps = 0/103 (0%)
Query 2 MATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAV 61
M+ YAIVKTGGKQYKVAVGDVV+VEKLE E G + LP L VDG VTTDA ALAKV+V
Sbjct 1 MSAYAIVKTGGKQYKVAVGDVVEVEKLEGEPGTEHILPAVLYVDGGDVTTDADALAKVSV 60
Query 62 TGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGIA 104
TG+V+ TKGPKIRIHKFKNKTGYHKRQGHRQ+LT ++VT I+
Sbjct 61 TGKVVEQTKGPKIRIHKFKNKTGYHKRQGHRQKLTRVEVTAIS 103
>gi|296394161|ref|YP_003659045.1| 50S ribosomal protein L21 [Segniliparus rotundus DSM 44985]
gi|296181308|gb|ADG98214.1| ribosomal protein L21 [Segniliparus rotundus DSM 44985]
Length=103
Score = 150 bits (380), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/103 (73%), Positives = 85/103 (83%), Gaps = 0/103 (0%)
Query 2 MATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAV 61
M TYA+VKTGGKQYKVAVGDVV VEKL+ E G+ ++L L+ G+TVTT A ALAK V
Sbjct 1 MGTYAVVKTGGKQYKVAVGDVVSVEKLDGEPGDAIALTPVLIASGSTVTTKADALAKAKV 60
Query 62 TGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGIA 104
T E++ HTKGPKIRIH FKNKTGYH+RQGHRQ LTVLKVTGIA
Sbjct 61 TAELVEHTKGPKIRIHHFKNKTGYHRRQGHRQPLTVLKVTGIA 103
>gi|257055294|ref|YP_003133126.1| 50S ribosomal protein L21P [Saccharomonospora viridis DSM 43017]
gi|256585166|gb|ACU96299.1| LSU ribosomal protein L21P [Saccharomonospora viridis DSM 43017]
Length=104
Score = 147 bits (370), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/102 (72%), Positives = 87/102 (86%), Gaps = 0/102 (0%)
Query 2 MATYAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAV 61
M+ YA+VKTGGKQYKVAVGDVV+VEKL+ E G + +LP +VVD VTTDA ALAKV+V
Sbjct 1 MSAYAVVKTGGKQYKVAVGDVVEVEKLDGEPGTEHTLPAVMVVDDGKVTTDADALAKVSV 60
Query 62 TGEVLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
TG+++ KGPKIRIHKFK+KTGYHKRQGHRQ+LT L+VTGI
Sbjct 61 TGKIVEQIKGPKIRIHKFKSKTGYHKRQGHRQRLTRLEVTGI 102
>gi|256375325|ref|YP_003098985.1| 50S ribosomal protein L21 [Actinosynnema mirum DSM 43827]
gi|255919628|gb|ACU35139.1| ribosomal protein L21 [Actinosynnema mirum DSM 43827]
Length=103
Score = 146 bits (369), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 73/99 (74%), Positives = 85/99 (86%), Gaps = 0/99 (0%)
Query 5 YAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAVTGE 64
YAIVKTGGKQYKVAVGDVV+VEKL+ G +++ LVVDG+ VT DA+AL K++VTGE
Sbjct 2 YAIVKTGGKQYKVAVGDVVEVEKLDGTPGTEITFAALLVVDGSDVTADAEALGKISVTGE 61
Query 65 VLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
V+ TKGPKIRIHKFKNKTGYHKRQGHRQ+LT +KVTGI
Sbjct 62 VVEQTKGPKIRIHKFKNKTGYHKRQGHRQKLTRVKVTGI 100
>gi|331695830|ref|YP_004332069.1| 50S ribosomal protein L21 [Pseudonocardia dioxanivorans CB1190]
gi|326950519|gb|AEA24216.1| 50S ribosomal protein L21 [Pseudonocardia dioxanivorans CB1190]
Length=102
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/100 (71%), Positives = 83/100 (83%), Gaps = 0/100 (0%)
Query 5 YAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAVTGE 64
YAIVKTGGKQYKVAV DVV VEK++ + G ++SLP L+VDG +TTDA ALAK +VT
Sbjct 2 YAIVKTGGKQYKVAVDDVVTVEKIDGDPGAEISLPAVLLVDGDQLTTDADALAKASVTAT 61
Query 65 VLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGIA 104
V+ HTKGPKIRIHKFKNKTGYHKRQGHRQ LT ++VT I+
Sbjct 62 VVEHTKGPKIRIHKFKNKTGYHKRQGHRQPLTRVQVTAIS 101
>gi|86739927|ref|YP_480327.1| 50S ribosomal protein L21 [Frankia sp. CcI3]
gi|122064981|sp|Q2JDP4.1|RL21_FRASC RecName: Full=50S ribosomal protein L21
gi|86566789|gb|ABD10598.1| LSU ribosomal protein L21P [Frankia sp. CcI3]
Length=105
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/99 (73%), Positives = 81/99 (82%), Gaps = 0/99 (0%)
Query 5 YAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAVTGE 64
YA+V +GGKQ++VAVGDVV VE L E G V+LP L+VDG +VT DA ALA VAVT E
Sbjct 2 YAVVASGGKQHRVAVGDVVDVELLSGEPGAAVNLPALLLVDGESVTHDADALASVAVTAE 61
Query 65 VLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
V+G KGPKIRIHKFKNKTGYHKRQGHRQ+LT LKVTGI
Sbjct 62 VVGVVKGPKIRIHKFKNKTGYHKRQGHRQKLTRLKVTGI 100
>gi|291302926|ref|YP_003514204.1| 50S ribosomal protein L21 [Stackebrandtia nassauensis DSM 44728]
gi|290572146|gb|ADD45111.1| ribosomal protein L21 [Stackebrandtia nassauensis DSM 44728]
Length=104
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/100 (71%), Positives = 82/100 (82%), Gaps = 0/100 (0%)
Query 5 YAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAVTGE 64
YAIVKTGGKQYK GDV++VEKL E G+ V+LP L+VD VTTDAKAL+ V V GE
Sbjct 2 YAIVKTGGKQYKAVEGDVLEVEKLAGEPGDTVTLPAVLLVDEGKVTTDAKALSGVTVNGE 61
Query 65 VLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGIA 104
++ H KGPKI+IHKFKNKTGYHKRQGHRQQLT +KVTGI+
Sbjct 62 LVDHFKGPKIKIHKFKNKTGYHKRQGHRQQLTRVKVTGIS 101
>gi|258651735|ref|YP_003200891.1| 50S ribosomal protein L21 [Nakamurella multipartita DSM 44233]
gi|258554960|gb|ACV77902.1| ribosomal protein L21 [Nakamurella multipartita DSM 44233]
Length=103
Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/100 (70%), Positives = 83/100 (83%), Gaps = 0/100 (0%)
Query 5 YAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAVTGE 64
YAIVKTGGKQYKVA GDV++VEKL+ + G V+LP LVVDG ++TT + LA V V+GE
Sbjct 2 YAIVKTGGKQYKVAEGDVIEVEKLKGDPGAAVTLPAVLVVDGPSITTAVEKLADVTVSGE 61
Query 65 VLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGIA 104
V+ HTKGPKI IHKFKNKTGYHKRQGHRQ LT ++VTGI+
Sbjct 62 VVAHTKGPKIVIHKFKNKTGYHKRQGHRQPLTKVRVTGIS 101
>gi|145595993|ref|YP_001160290.1| 50S ribosomal protein L21 [Salinispora tropica CNB-440]
gi|189041926|sp|A4XAG3.1|RL21_SALTO RecName: Full=50S ribosomal protein L21
gi|145305330|gb|ABP55912.1| LSU ribosomal protein L21P [Salinispora tropica CNB-440]
Length=104
Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/100 (71%), Positives = 80/100 (80%), Gaps = 0/100 (0%)
Query 5 YAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAVTGE 64
YAIVKTGGKQYKVA GDV++VEKL G+ V L L+VDG + TDA LAKV V+GE
Sbjct 2 YAIVKTGGKQYKVAEGDVIEVEKLAGTPGDAVQLAAVLLVDGDDLVTDAAKLAKVEVSGE 61
Query 65 VLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGIA 104
+ HTKGPKIRIHKFKNKTGYHKRQGHRQ LT +KVTGI+
Sbjct 62 IAAHTKGPKIRIHKFKNKTGYHKRQGHRQPLTQVKVTGIS 101
>gi|302869336|ref|YP_003837973.1| 50S ribosomal protein L21 [Micromonospora aurantiaca ATCC 27029]
gi|315504189|ref|YP_004083076.1| 50S ribosomal protein L21 [Micromonospora sp. L5]
gi|302572195|gb|ADL48397.1| ribosomal protein L21 [Micromonospora aurantiaca ATCC 27029]
gi|315410808|gb|ADU08925.1| ribosomal protein L21 [Micromonospora sp. L5]
Length=104
Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/100 (71%), Positives = 81/100 (81%), Gaps = 0/100 (0%)
Query 5 YAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAVTGE 64
YAIVKTGGKQYKVA GDV++VEKL G+ V L L+VDG + T+A LAKVAV+GE
Sbjct 2 YAIVKTGGKQYKVAEGDVIEVEKLAGAPGDAVKLTAVLLVDGDDLVTEAAKLAKVAVSGE 61
Query 65 VLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGIA 104
+ HTKGPKIRIHKFKNKTGYHKRQGHRQ LT +KVTGI+
Sbjct 62 IAAHTKGPKIRIHKFKNKTGYHKRQGHRQPLTQVKVTGIS 101
>gi|159039390|ref|YP_001538643.1| 50S ribosomal protein L21 [Salinispora arenicola CNS-205]
gi|189041924|sp|A8M0Z1.1|RL21_SALAI RecName: Full=50S ribosomal protein L21
gi|157918225|gb|ABV99652.1| ribosomal protein L21 [Salinispora arenicola CNS-205]
Length=104
Score = 140 bits (353), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 70/100 (70%), Positives = 80/100 (80%), Gaps = 0/100 (0%)
Query 5 YAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAVTGE 64
YAIVKTGGKQYKVA GDV++VEKL G+ V L L+VDG + TDA LA+V V+GE
Sbjct 2 YAIVKTGGKQYKVAEGDVIEVEKLAGAPGDAVQLAAVLLVDGDDLVTDAAKLAEVEVSGE 61
Query 65 VLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGIA 104
+ HTKGPKIRIHKFKNKTGYHKRQGHRQ LT +KVTGI+
Sbjct 62 IAAHTKGPKIRIHKFKNKTGYHKRQGHRQPLTQVKVTGIS 101
>gi|238060597|ref|ZP_04605306.1| 50S ribosomal protein L21 [Micromonospora sp. ATCC 39149]
gi|237882408|gb|EEP71236.1| 50S ribosomal protein L21 [Micromonospora sp. ATCC 39149]
Length=104
Score = 140 bits (352), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 70/100 (70%), Positives = 81/100 (81%), Gaps = 0/100 (0%)
Query 5 YAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAVTGE 64
YAIVKTGGKQYKVA GDV++VEKL G+ V L L+VDG + TDA LA+VAV+GE
Sbjct 2 YAIVKTGGKQYKVAEGDVIEVEKLAGAPGDAVKLTAVLLVDGDDLVTDAAKLAEVAVSGE 61
Query 65 VLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGIA 104
+ HTKGPKI+IHKFKNKTGYHKRQGHRQ LT +KVTGI+
Sbjct 62 IAAHTKGPKIKIHKFKNKTGYHKRQGHRQPLTQVKVTGIS 101
>gi|330469630|ref|YP_004407373.1| 50S ribosomal protein L21 [Verrucosispora maris AB-18-032]
gi|328812601|gb|AEB46773.1| 50S ribosomal protein L21 [Verrucosispora maris AB-18-032]
Length=104
Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/100 (70%), Positives = 80/100 (80%), Gaps = 0/100 (0%)
Query 5 YAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAVTGE 64
YAIVKTGGKQYKVA GDV++VEKL G+ V L L+VDG + TDA LA+V V+GE
Sbjct 2 YAIVKTGGKQYKVAEGDVIEVEKLVGAPGDAVKLAAVLLVDGDDLVTDAAKLAQVEVSGE 61
Query 65 VLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGIA 104
+ HTKGPKIRIHKFKNKTGYHKRQGHRQ LT +KVTGI+
Sbjct 62 IAAHTKGPKIRIHKFKNKTGYHKRQGHRQPLTQVKVTGIS 101
>gi|300859009|ref|YP_003783992.1| 50S ribosomal protein L21 [Corynebacterium pseudotuberculosis
FRC41]
gi|300686463|gb|ADK29385.1| 50S ribosomal protein L21 [Corynebacterium pseudotuberculosis
FRC41]
gi|302206707|gb|ADL11049.1| 50S ribosomal protein L21 [Corynebacterium pseudotuberculosis
C231]
gi|308276949|gb|ADO26848.1| 50S ribosomal protein L21 [Corynebacterium pseudotuberculosis
I19]
gi|341825392|gb|AEK92913.1| 50S ribosomal protein L21 [Corynebacterium pseudotuberculosis
PAT10]
Length=101
Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/99 (72%), Positives = 81/99 (82%), Gaps = 0/99 (0%)
Query 5 YAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAVTGE 64
YAIVKTGGKQYKVA GD VKVEK+E E G V+L L+VDGA VTT A LAKV+V E
Sbjct 2 YAIVKTGGKQYKVAEGDFVKVEKIEGEPGSSVALTPVLLVDGANVTTKAADLAKVSVNAE 61
Query 65 VLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
++ HTKGPKI+I K+KNKTGY KRQGHRQ+LTV+KVTGI
Sbjct 62 IVEHTKGPKIKILKYKNKTGYKKRQGHRQKLTVIKVTGI 100
>gi|158317016|ref|YP_001509524.1| 50S ribosomal protein L21 [Frankia sp. EAN1pec]
gi|226733237|sp|A8L1V8.1|RL21_FRASN RecName: Full=50S ribosomal protein L21
gi|158112421|gb|ABW14618.1| ribosomal protein L21 [Frankia sp. EAN1pec]
Length=105
Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/99 (71%), Positives = 79/99 (80%), Gaps = 0/99 (0%)
Query 5 YAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAVTGE 64
YA+V +GGKQ++VAVGDVV VE L E G V+LP L+VDG +VT DA ALA V VT E
Sbjct 2 YAVVASGGKQHRVAVGDVVDVELLSGEPGAAVNLPAVLLVDGESVTHDADALASVEVTAE 61
Query 65 VLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
V+G KGPKIRIHKFKNKTGYHKRQGHRQ+ T LKVTGI
Sbjct 62 VVGVVKGPKIRIHKFKNKTGYHKRQGHRQKYTRLKVTGI 100
>gi|337291352|ref|YP_004630373.1| 50S ribosomal protein L21 [Corynebacterium ulcerans BR-AD22]
gi|334697402|gb|AEG82199.1| 50S ribosomal protein L21 [Corynebacterium ulcerans 809]
gi|334699658|gb|AEG84454.1| 50S ribosomal protein L21 [Corynebacterium ulcerans BR-AD22]
Length=101
Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/99 (72%), Positives = 81/99 (82%), Gaps = 0/99 (0%)
Query 5 YAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAVTGE 64
YAIVKTGGKQYKVA GD VKVEK+E E G V+L L+VDGA VTT A LAKV+V E
Sbjct 2 YAIVKTGGKQYKVAEGDFVKVEKIEGEPGSSVALTPVLLVDGANVTTKAADLAKVSVNAE 61
Query 65 VLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
++ HTKGPKI+I K+KNKTGY KRQGHRQ+LTV+KVTGI
Sbjct 62 IVEHTKGPKIKILKYKNKTGYKKRQGHRQKLTVVKVTGI 100
>gi|302331260|gb|ADL21454.1| 50S ribosomal protein L21 [Corynebacterium pseudotuberculosis
1002]
Length=101
Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/99 (71%), Positives = 81/99 (82%), Gaps = 0/99 (0%)
Query 5 YAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAVTGE 64
YAIVKTGGKQYKVA GD VKVEK+E E G ++L L+VDGA VTT A LAKV+V E
Sbjct 2 YAIVKTGGKQYKVAEGDFVKVEKIEGEPGSSMALTPVLLVDGANVTTKAADLAKVSVNAE 61
Query 65 VLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
++ HTKGPKI+I K+KNKTGY KRQGHRQ+LTV+KVTGI
Sbjct 62 IVEHTKGPKIKILKYKNKTGYKKRQGHRQKLTVIKVTGI 100
>gi|25028827|ref|NP_738881.1| 50S ribosomal protein L21 [Corynebacterium efficiens YS-314]
gi|259507889|ref|ZP_05750789.1| diaminopimelate epimerase [Corynebacterium efficiens YS-314]
gi|81749054|sp|Q8FN76.1|RL21_COREF RecName: Full=50S ribosomal protein L21
gi|23494113|dbj|BAC19081.1| putative 50S ribosomal protein L21 [Corynebacterium efficiens
YS-314]
gi|259164523|gb|EEW49077.1| diaminopimelate epimerase [Corynebacterium efficiens YS-314]
Length=101
Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/99 (72%), Positives = 81/99 (82%), Gaps = 0/99 (0%)
Query 5 YAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAVTGE 64
YAIVKTGGKQYKVA GD+VKVEK+E E G V+L L+VDGA VTT A LA V+V E
Sbjct 2 YAIVKTGGKQYKVAEGDLVKVEKIEGEPGASVALTPVLLVDGADVTTAADKLASVSVNTE 61
Query 65 VLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
++ HTKGPKI+I K+KNKTGY KRQGHRQ+LTVLKVTGI
Sbjct 62 IVEHTKGPKIKILKYKNKTGYKKRQGHRQKLTVLKVTGI 100
>gi|325001211|ref|ZP_08122323.1| 50S ribosomal protein L21 [Pseudonocardia sp. P1]
Length=101
Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/99 (71%), Positives = 79/99 (80%), Gaps = 1/99 (1%)
Query 5 YAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAVTGE 64
YAIVKTGGKQYKVAV DVV VEK++ E G ++SLP L+VDG VTTDA L AV+
Sbjct 2 YAIVKTGGKQYKVAVDDVVTVEKIDGEPGAEISLPAVLLVDGDQVTTDASGLTS-AVSAT 60
Query 65 VLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
V+ HTKGPKIRIHKFKNKTGYHKRQGHRQ LT ++VT I
Sbjct 61 VVEHTKGPKIRIHKFKNKTGYHKRQGHRQPLTKVQVTAI 99
>gi|38234352|ref|NP_940119.1| 50S ribosomal protein L21 [Corynebacterium diphtheriae NCTC 13129]
gi|81698505|sp|Q6NFV5.1|RL21_CORDI RecName: Full=50S ribosomal protein L21
gi|38200615|emb|CAE50311.1| 50S ribosomal protein L21 [Corynebacterium diphtheriae]
Length=101
Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/99 (72%), Positives = 80/99 (81%), Gaps = 0/99 (0%)
Query 5 YAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAVTGE 64
YAIVKTGGKQYKVA GD VKVEK+E E G V+L L+VDGA VTT A LAKV+VT E
Sbjct 2 YAIVKTGGKQYKVAEGDFVKVEKIEGEPGSSVALTPILLVDGADVTTKAADLAKVSVTAE 61
Query 65 VLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
++ KGPKI+I K+KNKTGY KRQGHRQQLTVLK+TGI
Sbjct 62 IVEAVKGPKIKILKYKNKTGYKKRQGHRQQLTVLKITGI 100
>gi|225021683|ref|ZP_03710875.1| hypothetical protein CORMATOL_01711 [Corynebacterium matruchotii
ATCC 33806]
gi|305680707|ref|ZP_07403514.1| ribosomal protein L21 [Corynebacterium matruchotii ATCC 14266]
gi|224945674|gb|EEG26883.1| hypothetical protein CORMATOL_01711 [Corynebacterium matruchotii
ATCC 33806]
gi|305658912|gb|EFM48412.1| ribosomal protein L21 [Corynebacterium matruchotii ATCC 14266]
Length=101
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/99 (70%), Positives = 80/99 (81%), Gaps = 0/99 (0%)
Query 5 YAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAVTGE 64
YAIVKTGG+QYKVA GD+VKVEK+E E G V+L L+VDGATVTT A LAKV V+ E
Sbjct 2 YAIVKTGGRQYKVAEGDIVKVEKIEGELGSSVALTPVLLVDGATVTTKADELAKVKVSAE 61
Query 65 VLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
++ KGPKI+I K+KNKTGY KRQGHRQ LTVLK+TGI
Sbjct 62 IIDSVKGPKIKILKYKNKTGYKKRQGHRQPLTVLKITGI 100
>gi|19553562|ref|NP_601564.1| 50S ribosomal protein L21 [Corynebacterium glutamicum ATCC 13032]
gi|62391206|ref|YP_226608.1| 50S ribosomal protein L21 [Corynebacterium glutamicum ATCC 13032]
gi|145296332|ref|YP_001139153.1| 50S ribosomal protein L21 [Corynebacterium glutamicum R]
6 more sequence titles
Length=101
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/99 (72%), Positives = 80/99 (81%), Gaps = 0/99 (0%)
Query 5 YAIVKTGGKQYKVAVGDVVKVEKLESEQGEKVSLPVALVVDGATVTTDAKALAKVAVTGE 64
YAIVKTGGKQYKVA GD+VKVEK+E E G V+L L+VDGA VTT A LA V+V E
Sbjct 2 YAIVKTGGKQYKVAEGDLVKVEKIEGEPGASVALTPVLLVDGADVTTAADKLASVSVNTE 61
Query 65 VLGHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI 103
++ HTKGPKI+I K+KNKTGY KRQGHRQ LTVLKVTGI
Sbjct 62 IVEHTKGPKIKILKYKNKTGYKKRQGHRQPLTVLKVTGI 100
Lambda K H
0.314 0.131 0.354
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 127350764394
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40