BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2460c
Length=214
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609597|ref|NP_216976.1| ATP-dependent Clp protease proteoly... 438 2e-121
gi|340627474|ref|YP_004745926.1| putative ATP-dependent CLP prot... 436 1e-120
gi|15827777|ref|NP_302040.1| ATP-dependent Clp protease proteoly... 427 6e-118
gi|240170931|ref|ZP_04749590.1| ATP-dependent Clp protease prote... 422 1e-116
gi|41408378|ref|NP_961214.1| ATP-dependent Clp protease proteoly... 401 4e-110
gi|118618991|ref|YP_907323.1| ATP-dependent Clp protease proteol... 399 1e-109
gi|342857856|ref|ZP_08714512.1| ATP-dependent Clp protease prote... 398 2e-109
gi|296170472|ref|ZP_06852060.1| ATP-dependent Clp protease prote... 397 4e-109
gi|254821427|ref|ZP_05226428.1| ATP-dependent Clp protease prote... 397 8e-109
gi|118473678|ref|YP_888935.1| ATP-dependent Clp protease proteol... 388 2e-106
gi|333990088|ref|YP_004522702.1| ATP-dependent Clp protease prot... 388 4e-106
gi|108800543|ref|YP_640740.1| ATP-dependent Clp protease proteol... 387 4e-106
gi|120404993|ref|YP_954822.1| ATP-dependent Clp protease proteol... 384 4e-105
gi|145223176|ref|YP_001133854.1| ATP-dependent Clp protease prot... 377 8e-103
gi|169628672|ref|YP_001702321.1| ATP-dependent Clp protease prot... 371 3e-101
gi|54023301|ref|YP_117543.1| ATP-dependent Clp protease proteoly... 363 6e-99
gi|226360501|ref|YP_002778279.1| ATP-dependent Clp protease prot... 360 6e-98
gi|111018381|ref|YP_701353.1| ATP-dependent Clp protease proteol... 358 2e-97
gi|312140360|ref|YP_004007696.1| clp peptidase proteolytic subun... 353 8e-96
gi|333918760|ref|YP_004492341.1| ATP-dependent Clp protease prot... 345 3e-93
gi|336325183|ref|YP_004605149.1| ATP-dependent Clp protease prot... 344 6e-93
gi|319947980|ref|ZP_08022157.1| ATP-dependent Clp protease prote... 342 2e-92
gi|260578313|ref|ZP_05846229.1| ATP-dependent Clp protease, prot... 339 2e-91
gi|68535617|ref|YP_250322.1| ATP-dependent Clp protease proteoly... 339 2e-91
gi|334564682|ref|ZP_08517673.1| ATP-dependent Clp protease prote... 336 1e-90
gi|237785950|ref|YP_002906655.1| ATP-dependent Clp protease prot... 336 1e-90
gi|172041059|ref|YP_001800773.1| ATP-dependent Clp protease prot... 336 1e-90
gi|340793852|ref|YP_004759315.1| ATP-dependent Clp protease prot... 331 5e-89
gi|317508501|ref|ZP_07966168.1| Clp protease [Segniliparus rugos... 331 5e-89
gi|213966164|ref|ZP_03394350.1| Clp protease [Corynebacterium am... 328 4e-88
gi|296394282|ref|YP_003659166.1| endopeptidase Clp [Segniliparus... 326 1e-87
gi|226307301|ref|YP_002767261.1| ATP-dependent Clp protease prot... 324 6e-87
gi|256375294|ref|YP_003098954.1| endopeptidase Clp [Actinosynnem... 315 2e-84
gi|38234362|ref|NP_940129.1| ATP-dependent Clp protease proteoly... 314 4e-84
gi|300780630|ref|ZP_07090485.1| endopeptidase Clp [Corynebacteri... 314 6e-84
gi|227503045|ref|ZP_03933094.1| ATP-dependent Clp protease prote... 313 9e-84
gi|225021669|ref|ZP_03710861.1| hypothetical protein CORMATOL_01... 313 1e-83
gi|255325481|ref|ZP_05366583.1| Clp protease [Corynebacterium tu... 311 3e-83
gi|300859021|ref|YP_003784004.1| hypothetical protein cpfrc_0160... 311 4e-83
gi|256375241|ref|YP_003098901.1| endopeptidase Clp [Actinosynnem... 311 5e-83
gi|325000575|ref|ZP_08121687.1| endopeptidase Clp [Pseudonocardi... 310 1e-82
gi|308276963|gb|ADO26862.1| ATP-dependent Clp protease proteolyt... 310 1e-82
gi|337291365|ref|YP_004630386.1| hypothetical protein CULC22_017... 309 2e-82
gi|19553609|ref|NP_601611.1| ATP-dependent Clp protease proteoly... 308 3e-82
gi|25028867|ref|NP_738921.1| ATP-dependent Clp protease proteoly... 308 3e-82
gi|296118750|ref|ZP_06837326.1| Clp protease [Corynebacterium am... 308 5e-82
gi|257055263|ref|YP_003133095.1| ATP-dependent Clp protease prot... 306 2e-81
gi|227548722|ref|ZP_03978771.1| ATP-dependent Clp protease prote... 305 3e-81
gi|300788576|ref|YP_003768867.1| protease subunit of ATP-depende... 305 4e-81
gi|227488327|ref|ZP_03918643.1| endopeptidase Clp [Corynebacteri... 303 1e-80
>gi|15609597|ref|NP_216976.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis H37Rv]
gi|15841984|ref|NP_337021.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis CDC1551]
gi|31793641|ref|NP_856134.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
bovis AF2122/97]
80 more sequence titles
Length=214
Score = 438 bits (1127), Expect = 2e-121, Method: Compositional matrix adjust.
Identities = 213/214 (99%), Positives = 214/214 (100%), Gaps = 0/214 (0%)
Query 1 VNSQNSQIQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQL 60
+NSQNSQIQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQL
Sbjct 1 MNSQNSQIQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQL 60
Query 61 LVLESLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGT 120
LVLESLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGT
Sbjct 61 LVLESLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGT 120
Query 121 PGKRMALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIR 180
PGKRMALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIR
Sbjct 121 PGKRMALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIR 180
Query 181 KDTDRDKILTAEEAKDYGIIDTVLEYRKLSAQTA 214
KDTDRDKILTAEEAKDYGIIDTVLEYRKLSAQTA
Sbjct 181 KDTDRDKILTAEEAKDYGIIDTVLEYRKLSAQTA 214
>gi|340627474|ref|YP_004745926.1| putative ATP-dependent CLP protease proteolytic subunit 2 [Mycobacterium
canettii CIPT 140010059]
gi|340005664|emb|CCC44830.1| putative ATP-dependent CLP protease proteolytic subunit 2 CLPP2
(endopeptidase CLP 2) [Mycobacterium canettii CIPT 140010059]
Length=214
Score = 436 bits (1121), Expect = 1e-120, Method: Compositional matrix adjust.
Identities = 212/214 (99%), Positives = 213/214 (99%), Gaps = 0/214 (0%)
Query 1 VNSQNSQIQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQL 60
+NSQNSQ QPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQL
Sbjct 1 MNSQNSQSQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQL 60
Query 61 LVLESLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGT 120
LVLESLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGT
Sbjct 61 LVLESLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGT 120
Query 121 PGKRMALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIR 180
PGKRMALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIR
Sbjct 121 PGKRMALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIR 180
Query 181 KDTDRDKILTAEEAKDYGIIDTVLEYRKLSAQTA 214
KDTDRDKILTAEEAKDYGIIDTVLEYRKLSAQTA
Sbjct 181 KDTDRDKILTAEEAKDYGIIDTVLEYRKLSAQTA 214
>gi|15827777|ref|NP_302040.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
leprae TN]
gi|221230254|ref|YP_002503670.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
leprae Br4923]
gi|14194506|sp|Q9CBY4.1|CLPP2_MYCLE RecName: Full=ATP-dependent Clp protease proteolytic subunit
2; AltName: Full=Endopeptidase Clp 2
gi|13093329|emb|CAC30429.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
leprae]
gi|219933361|emb|CAR71573.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
leprae Br4923]
Length=214
Score = 427 bits (1098), Expect = 6e-118, Method: Compositional matrix adjust.
Identities = 206/210 (99%), Positives = 209/210 (99%), Gaps = 0/210 (0%)
Query 4 QNSQIQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVL 63
QNSQ+QPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVL
Sbjct 4 QNSQLQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVL 63
Query 64 ESLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGK 123
ESLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGK
Sbjct 64 ESLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGK 123
Query 124 RMALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDT 183
RMALPNARVLIHQPSL+GVIQGQFSDLEIQAAEIERMRTLMETTL+RHTGKDA VIRKDT
Sbjct 124 RMALPNARVLIHQPSLAGVIQGQFSDLEIQAAEIERMRTLMETTLSRHTGKDAAVIRKDT 183
Query 184 DRDKILTAEEAKDYGIIDTVLEYRKLSAQT 213
DRDKILTAEEAKDYGIIDTVLEYRKLSAQT
Sbjct 184 DRDKILTAEEAKDYGIIDTVLEYRKLSAQT 213
>gi|240170931|ref|ZP_04749590.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
kansasii ATCC 12478]
Length=211
Score = 422 bits (1086), Expect = 1e-116, Method: Compositional matrix adjust.
Identities = 206/210 (99%), Positives = 206/210 (99%), Gaps = 0/210 (0%)
Query 5 NSQIQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLE 64
N Q QPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLE
Sbjct 2 NPQSQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLE 61
Query 65 SLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKR 124
SLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKR
Sbjct 62 SLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKR 121
Query 125 MALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTD 184
MALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDA VIRKDTD
Sbjct 122 MALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAAVIRKDTD 181
Query 185 RDKILTAEEAKDYGIIDTVLEYRKLSAQTA 214
RDKILTAEEAKDYGIIDTVLEYRKLSAQ A
Sbjct 182 RDKILTAEEAKDYGIIDTVLEYRKLSAQKA 211
>gi|41408378|ref|NP_961214.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
avium subsp. paratuberculosis K-10]
gi|118462339|ref|YP_880941.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
avium 104]
gi|254774530|ref|ZP_05216046.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
avium subsp. avium ATCC 25291]
gi|67460506|sp|Q73XM9.1|CLPP1_MYCPA RecName: Full=ATP-dependent Clp protease proteolytic subunit
1; AltName: Full=Endopeptidase Clp 1
gi|41396734|gb|AAS04597.1| ClpP2 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118163626|gb|ABK64523.1| Clp protease [Mycobacterium avium 104]
gi|336458286|gb|EGO37266.1| protease subunit of ATP-dependent protease [Mycobacterium avium
subsp. paratuberculosis S397]
Length=211
Score = 401 bits (1030), Expect = 4e-110, Method: Compositional matrix adjust.
Identities = 205/210 (98%), Positives = 206/210 (99%), Gaps = 0/210 (0%)
Query 5 NSQIQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLE 64
N QIQPQARYILPSFIEHSSFG+KESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLE
Sbjct 2 NPQIQPQARYILPSFIEHSSFGIKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLE 61
Query 65 SLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKR 124
SLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKR
Sbjct 62 SLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKR 121
Query 125 MALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTD 184
MALPNARVLIHQPSL GVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDA IRKDTD
Sbjct 122 MALPNARVLIHQPSLQGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAATIRKDTD 181
Query 185 RDKILTAEEAKDYGIIDTVLEYRKLSAQTA 214
RDKILTAEEAKDYGIIDTVLEYRKLSAQTA
Sbjct 182 RDKILTAEEAKDYGIIDTVLEYRKLSAQTA 211
>gi|118618991|ref|YP_907323.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
ulcerans Agy99]
gi|183983781|ref|YP_001852072.1| ATP-dependent Clp protease proteolytic subunit ClpP2 [Mycobacterium
marinum M]
gi|118571101|gb|ABL05852.1| ATP-dependent CLP protease proteolytic subunit 2 ClpP2 [Mycobacterium
ulcerans Agy99]
gi|183177107|gb|ACC42217.1| ATP-dependent CLP protease proteolytic subunit 2 ClpP2 [Mycobacterium
marinum M]
Length=211
Score = 399 bits (1025), Expect = 1e-109, Method: Compositional matrix adjust.
Identities = 204/210 (98%), Positives = 206/210 (99%), Gaps = 0/210 (0%)
Query 5 NSQIQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLE 64
N Q+QPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLE
Sbjct 2 NPQVQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLE 61
Query 65 SLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKR 124
SLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKR
Sbjct 62 SLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKR 121
Query 125 MALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTD 184
MALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLME+TLARHTGKD VIRKDTD
Sbjct 122 MALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMESTLARHTGKDPSVIRKDTD 181
Query 185 RDKILTAEEAKDYGIIDTVLEYRKLSAQTA 214
RDKILTAEEAKDYGIIDTVLEYRKLSAQ A
Sbjct 182 RDKILTAEEAKDYGIIDTVLEYRKLSAQNA 211
>gi|342857856|ref|ZP_08714512.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
colombiense CECT 3035]
gi|342135189|gb|EGT88355.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
colombiense CECT 3035]
Length=211
Score = 398 bits (1023), Expect = 2e-109, Method: Compositional matrix adjust.
Identities = 203/210 (97%), Positives = 205/210 (98%), Gaps = 0/210 (0%)
Query 5 NSQIQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLE 64
N + QPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLE
Sbjct 2 NPETQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLE 61
Query 65 SLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKR 124
SLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKR
Sbjct 62 SLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKR 121
Query 125 MALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTD 184
MALPNARVLIHQPSL GVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDA +RKDTD
Sbjct 122 MALPNARVLIHQPSLQGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAATVRKDTD 181
Query 185 RDKILTAEEAKDYGIIDTVLEYRKLSAQTA 214
RDKILTAEEAKDYGIIDTVLEYRKLSAQTA
Sbjct 182 RDKILTAEEAKDYGIIDTVLEYRKLSAQTA 211
>gi|296170472|ref|ZP_06852060.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295894943|gb|EFG74664.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length=214
Score = 397 bits (1021), Expect = 4e-109, Method: Compositional matrix adjust.
Identities = 202/214 (95%), Positives = 209/214 (98%), Gaps = 0/214 (0%)
Query 1 VNSQNSQIQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQL 60
+++Q+ IQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQL
Sbjct 1 MSTQHPNIQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQL 60
Query 61 LVLESLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGT 120
LVLESLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGT
Sbjct 61 LVLESLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGT 120
Query 121 PGKRMALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIR 180
PGKRMALPNARVLIHQPSL GVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDA +R
Sbjct 121 PGKRMALPNARVLIHQPSLQGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAATVR 180
Query 181 KDTDRDKILTAEEAKDYGIIDTVLEYRKLSAQTA 214
KDTDRDKILTA+EAK+YGIIDTVLEYRKLSAQTA
Sbjct 181 KDTDRDKILTADEAKEYGIIDTVLEYRKLSAQTA 214
>gi|254821427|ref|ZP_05226428.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
intracellulare ATCC 13950]
Length=211
Score = 397 bits (1019), Expect = 8e-109, Method: Compositional matrix adjust.
Identities = 202/210 (97%), Positives = 205/210 (98%), Gaps = 0/210 (0%)
Query 5 NSQIQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLE 64
N + QPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLE
Sbjct 2 NPETQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLE 61
Query 65 SLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKR 124
SLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKR
Sbjct 62 SLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKR 121
Query 125 MALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTD 184
MALPNARVLIHQPSL GVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDA +RKDTD
Sbjct 122 MALPNARVLIHQPSLQGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAATVRKDTD 181
Query 185 RDKILTAEEAKDYGIIDTVLEYRKLSAQTA 214
RDKILTAEEAKDYGIIDTVLEYRKLSAQ+A
Sbjct 182 RDKILTAEEAKDYGIIDTVLEYRKLSAQSA 211
>gi|118473678|ref|YP_888935.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
smegmatis str. MC2 155]
gi|118174965|gb|ABK75861.1| Clp protease [Mycobacterium smegmatis str. MC2 155]
Length=218
Score = 388 bits (997), Expect = 2e-106, Method: Compositional matrix adjust.
Identities = 198/212 (94%), Positives = 207/212 (98%), Gaps = 0/212 (0%)
Query 3 SQNSQIQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLV 62
S ++++QPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLV
Sbjct 7 SLDARLQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLV 66
Query 63 LESLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPG 122
LESLDPDRDITMYINSPGG FTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPG
Sbjct 67 LESLDPDRDITMYINSPGGSFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPG 126
Query 123 KRMALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKD 182
KR+ALPNARVLIHQP+LSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKD IRKD
Sbjct 127 KRLALPNARVLIHQPALSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDPAQIRKD 186
Query 183 TDRDKILTAEEAKDYGIIDTVLEYRKLSAQTA 214
TDRDKILTAEEAK+YGIIDTVL+YRKLSAQT+
Sbjct 187 TDRDKILTAEEAKEYGIIDTVLQYRKLSAQTS 218
>gi|333990088|ref|YP_004522702.1| ATP-dependent Clp protease proteolytic subunit ClpP2 [Mycobacterium
sp. JDM601]
gi|333486056|gb|AEF35448.1| ATP-dependent Clp protease proteolytic subunit ClpP2 [Mycobacterium
sp. JDM601]
Length=215
Score = 388 bits (996), Expect = 4e-106, Method: Compositional matrix adjust.
Identities = 198/207 (96%), Positives = 203/207 (99%), Gaps = 0/207 (0%)
Query 8 IQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLD 67
I PQARYILPSF+EHSS+GVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLD
Sbjct 9 IAPQARYILPSFVEHSSWGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLD 68
Query 68 PDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMAL 127
PDRDITMYINSPGG FTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMAL
Sbjct 69 PDRDITMYINSPGGSFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMAL 128
Query 128 PNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDK 187
PNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLME+TLARHTGKD VIRKDTDRDK
Sbjct 129 PNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMESTLARHTGKDPEVIRKDTDRDK 188
Query 188 ILTAEEAKDYGIIDTVLEYRKLSAQTA 214
ILTAE+AK+YGIIDTVLEYRKLSAQTA
Sbjct 189 ILTAEDAKEYGIIDTVLEYRKLSAQTA 215
>gi|108800543|ref|YP_640740.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
sp. MCS]
gi|119869682|ref|YP_939634.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
sp. KMS]
gi|126436159|ref|YP_001071850.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
sp. JLS]
gi|108770962|gb|ABG09684.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mycobacterium
sp. MCS]
gi|119695771|gb|ABL92844.1| ATP-dependent Clp protease proteolytic subunit ClpP / ClpP2 peptidase,
Serine peptidase, MEROPS family S14 [Mycobacterium
sp. KMS]
gi|126235959|gb|ABN99359.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mycobacterium
sp. JLS]
Length=215
Score = 387 bits (995), Expect = 4e-106, Method: Compositional matrix adjust.
Identities = 197/213 (93%), Positives = 204/213 (96%), Gaps = 0/213 (0%)
Query 2 NSQNSQIQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLL 61
N + ++QPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLL
Sbjct 3 NQTDPRLQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLL 62
Query 62 VLESLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTP 121
VLESLDPDRDITMYINSPGG FTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTP
Sbjct 63 VLESLDPDRDITMYINSPGGSFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTP 122
Query 122 GKRMALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRK 181
GKR+ALPNAR+LIHQP+LSGVIQGQFSDLEIQA EIERMRTLME TLARHTGKD IRK
Sbjct 123 GKRLALPNARILIHQPALSGVIQGQFSDLEIQAKEIERMRTLMEVTLARHTGKDPETIRK 182
Query 182 DTDRDKILTAEEAKDYGIIDTVLEYRKLSAQTA 214
DTDRDKILTAEEAKDYGIIDTVLEYRKLSAQT+
Sbjct 183 DTDRDKILTAEEAKDYGIIDTVLEYRKLSAQTS 215
>gi|120404993|ref|YP_954822.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
vanbaalenii PYR-1]
gi|119957811|gb|ABM14816.1| ATP-dependent Clp protease proteolytic subunit ClpP / ClpP2 peptidase,
Serine peptidase, MEROPS family S14 [Mycobacterium
vanbaalenii PYR-1]
Length=212
Score = 384 bits (987), Expect = 4e-105, Method: Compositional matrix adjust.
Identities = 196/210 (94%), Positives = 203/210 (97%), Gaps = 0/210 (0%)
Query 5 NSQIQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLE 64
+ ++QPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLE
Sbjct 3 DPRLQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLE 62
Query 65 SLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKR 124
SLDPDRDITMYINSPGG FTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKR
Sbjct 63 SLDPDRDITMYINSPGGSFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKR 122
Query 125 MALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTD 184
MALPNAR+LIHQP+L GVIQGQFSDLEIQAAEIERMRTLME TLARHTGKDA IRKDTD
Sbjct 123 MALPNARILIHQPALGGVIQGQFSDLEIQAAEIERMRTLMEETLARHTGKDAAQIRKDTD 182
Query 185 RDKILTAEEAKDYGIIDTVLEYRKLSAQTA 214
RDKILTAE+AK+YGIIDTVLEYRKLSAQ A
Sbjct 183 RDKILTAEQAKEYGIIDTVLEYRKLSAQKA 212
>gi|145223176|ref|YP_001133854.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
gilvum PYR-GCK]
gi|315443633|ref|YP_004076512.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mycobacterium
sp. Spyr1]
gi|145215662|gb|ABP45066.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mycobacterium
gilvum PYR-GCK]
gi|315261936|gb|ADT98677.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mycobacterium
sp. Spyr1]
Length=215
Score = 377 bits (967), Expect = 8e-103, Method: Compositional matrix adjust.
Identities = 194/212 (92%), Positives = 201/212 (95%), Gaps = 0/212 (0%)
Query 1 VNSQNSQIQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQL 60
++ + ++QPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQL
Sbjct 2 IDHTDPRLQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQL 61
Query 61 LVLESLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGT 120
LVLESLDPDRDITMYINSPGG FTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGT
Sbjct 62 LVLESLDPDRDITMYINSPGGSFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGT 121
Query 121 PGKRMALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIR 180
PGKRMALPNARVLIHQP+L GVIQGQFSDLEIQAAEIERMRTLME TL+ HTGK A VIR
Sbjct 122 PGKRMALPNARVLIHQPALGGVIQGQFSDLEIQAAEIERMRTLMEETLSLHTGKPADVIR 181
Query 181 KDTDRDKILTAEEAKDYGIIDTVLEYRKLSAQ 212
KDTDRDKILTA AKDYGIIDTVLEYRKLSAQ
Sbjct 182 KDTDRDKILTAAAAKDYGIIDTVLEYRKLSAQ 213
>gi|169628672|ref|YP_001702321.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
abscessus ATCC 19977]
gi|169240639|emb|CAM61667.1| ATP-dependent Clp protease, proteolytic subunit 1 [Mycobacterium
abscessus]
Length=217
Score = 371 bits (953), Expect = 3e-101, Method: Compositional matrix adjust.
Identities = 190/210 (91%), Positives = 199/210 (95%), Gaps = 0/210 (0%)
Query 5 NSQIQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLE 64
N ++ PQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLE
Sbjct 7 NPELAPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLE 66
Query 65 SLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKR 124
SLDPDR+ITMYINSPGG FTSLMAIYDTMQYVR+DI+TV LGQAASAAAVLLAAGTPGKR
Sbjct 67 SLDPDREITMYINSPGGSFTSLMAIYDTMQYVRSDIRTVVLGQAASAAAVLLAAGTPGKR 126
Query 125 MALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTD 184
MALPNARVLIHQP+LSGVIQGQF+DLEIQAAEIERMR L ETTLARHTG+ A IRKDTD
Sbjct 127 MALPNARVLIHQPALSGVIQGQFTDLEIQAAEIERMRVLQETTLARHTGRPAEEIRKDTD 186
Query 185 RDKILTAEEAKDYGIIDTVLEYRKLSAQTA 214
RDKI TAEEAK+YGIID VLEYRKLSAQTA
Sbjct 187 RDKIFTAEEAKEYGIIDVVLEYRKLSAQTA 216
>gi|54023301|ref|YP_117543.1| ATP-dependent Clp protease proteolytic subunit [Nocardia farcinica
IFM 10152]
gi|67460458|sp|Q5Z062.1|CLPP3_NOCFA RecName: Full=ATP-dependent Clp protease proteolytic subunit
3; AltName: Full=Endopeptidase Clp 3
gi|54014809|dbj|BAD56179.1| putative Clp protease proteolytic subunit [Nocardia farcinica
IFM 10152]
Length=221
Score = 363 bits (933), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 187/203 (93%), Positives = 191/203 (95%), Gaps = 0/203 (0%)
Query 10 PQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPD 69
PQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPD
Sbjct 18 PQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPD 77
Query 70 RDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPN 129
RDITMYINSPGG FTSLMAIYDTMQYVRAD+ TVCLGQAASAAAVLLAAGTPGKR LPN
Sbjct 78 RDITMYINSPGGSFTSLMAIYDTMQYVRADVATVCLGQAASAAAVLLAAGTPGKRACLPN 137
Query 130 ARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKIL 189
ARVLIHQPSL G IQGQ SDLEIQAAEIERMR LMETTLARHTGKD IRKDTDRDKIL
Sbjct 138 ARVLIHQPSLEGGIQGQVSDLEIQAAEIERMRRLMETTLARHTGKDPDTIRKDTDRDKIL 197
Query 190 TAEEAKDYGIIDTVLEYRKLSAQ 212
TAE+AK+YGIIDTV +YRKLSAQ
Sbjct 198 TAEDAKEYGIIDTVFDYRKLSAQ 220
>gi|226360501|ref|YP_002778279.1| ATP-dependent Clp protease proteolytic subunit [Rhodococcus opacus
B4]
gi|226238986|dbj|BAH49334.1| ATP-dependent Clp protease proteolytic subunit [Rhodococcus opacus
B4]
Length=220
Score = 360 bits (925), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 187/203 (93%), Positives = 193/203 (96%), Gaps = 1/203 (0%)
Query 10 PQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPD 69
PQ+RYILPSFIEHSS+GVKESNPYNKLFEERIIFLGVQVDDASAND+MAQLLVLESLDPD
Sbjct 18 PQSRYILPSFIEHSSYGVKESNPYNKLFEERIIFLGVQVDDASANDVMAQLLVLESLDPD 77
Query 70 RDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPN 129
RDITMYINSPGG FTSLMAIYDTMQYVRADI TVCLGQAASAAAVLLAAGTPGKR+ALPN
Sbjct 78 RDITMYINSPGGSFTSLMAIYDTMQYVRADITTVCLGQAASAAAVLLAAGTPGKRLALPN 137
Query 130 ARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKIL 189
ARVLIHQP+ G IQGQ SDLEIQAAEIERMR LMETTLA+HTGKDA VIRKDTDRDKIL
Sbjct 138 ARVLIHQPATGG-IQGQVSDLEIQAAEIERMRRLMETTLAKHTGKDADVIRKDTDRDKIL 196
Query 190 TAEEAKDYGIIDTVLEYRKLSAQ 212
TA EAKDYGIID VLEYRKLSAQ
Sbjct 197 TAAEAKDYGIIDDVLEYRKLSAQ 219
>gi|111018381|ref|YP_701353.1| ATP-dependent Clp protease proteolytic subunit [Rhodococcus jostii
RHA1]
gi|116243108|sp|Q0SGZ1.1|CLPP1_RHOSR RecName: Full=ATP-dependent Clp protease proteolytic subunit
1; AltName: Full=Endopeptidase Clp 1
gi|110817911|gb|ABG93195.1| ATP-dependent Clp protease [Rhodococcus jostii RHA1]
Length=220
Score = 358 bits (920), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 185/203 (92%), Positives = 193/203 (96%), Gaps = 1/203 (0%)
Query 10 PQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPD 69
PQ+RYILPSFIEHSS+GVKESNPYNKLFEERIIFLGVQVDDASAND+MAQLLVLESLDPD
Sbjct 18 PQSRYILPSFIEHSSYGVKESNPYNKLFEERIIFLGVQVDDASANDVMAQLLVLESLDPD 77
Query 70 RDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPN 129
RDITMYINSPGG FTSLMAIYDTMQYVRADI TVCLGQAASAAAVLLAAG+PGKR+ALPN
Sbjct 78 RDITMYINSPGGSFTSLMAIYDTMQYVRADITTVCLGQAASAAAVLLAAGSPGKRLALPN 137
Query 130 ARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKIL 189
ARVLIHQP+ G IQGQ SDLEIQAAEIERMR LMETTLA+HTGKDA VIRKDTDRDKIL
Sbjct 138 ARVLIHQPATGG-IQGQVSDLEIQAAEIERMRRLMETTLAKHTGKDAAVIRKDTDRDKIL 196
Query 190 TAEEAKDYGIIDTVLEYRKLSAQ 212
TA EAK+YGIID VLEYRKLSAQ
Sbjct 197 TAAEAKEYGIIDDVLEYRKLSAQ 219
>gi|312140360|ref|YP_004007696.1| clp peptidase proteolytic subunit 2 clpp2 [Rhodococcus equi 103S]
gi|325676030|ref|ZP_08155713.1| ATP-dependent Clp protease, protease subunit [Rhodococcus equi
ATCC 33707]
gi|311889699|emb|CBH49016.1| Clp peptidase proteolytic subunit 2 ClpP2 [Rhodococcus equi 103S]
gi|325553268|gb|EGD22947.1| ATP-dependent Clp protease, protease subunit [Rhodococcus equi
ATCC 33707]
Length=223
Score = 353 bits (906), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 183/202 (91%), Positives = 191/202 (95%), Gaps = 1/202 (0%)
Query 11 QARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPDR 70
Q+RYILPSFIEHSS+GVKESNPYNKLFEERIIFLGVQVDDASAND+MAQLLVLESLDPDR
Sbjct 22 QSRYILPSFIEHSSYGVKESNPYNKLFEERIIFLGVQVDDASANDVMAQLLVLESLDPDR 81
Query 71 DITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPNA 130
DITMYINSPGG FTSLMAIYDTMQYVRADI TVCLGQAASAAAVLLAAGTPGKR+ALPNA
Sbjct 82 DITMYINSPGGSFTSLMAIYDTMQYVRADITTVCLGQAASAAAVLLAAGTPGKRLALPNA 141
Query 131 RVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKILT 190
RVLIHQP+ G IQGQ SDLEIQAAEIERMR LMETTL +HTGKD VIRKDTDRDKILT
Sbjct 142 RVLIHQPATGG-IQGQVSDLEIQAAEIERMRRLMETTLGKHTGKDPDVIRKDTDRDKILT 200
Query 191 AEEAKDYGIIDTVLEYRKLSAQ 212
AEEAK+YGIID VL+YRKLSAQ
Sbjct 201 AEEAKEYGIIDDVLQYRKLSAQ 222
>gi|333918760|ref|YP_004492341.1| ATP-dependent Clp protease proteolytic subunit [Amycolicicoccus
subflavus DQS3-9A1]
gi|333480981|gb|AEF39541.1| ATP-dependent Clp protease proteolytic subunit [Amycolicicoccus
subflavus DQS3-9A1]
Length=212
Score = 345 bits (884), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 179/209 (86%), Positives = 189/209 (91%), Gaps = 1/209 (0%)
Query 5 NSQIQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLE 64
N + P +RYILPSFIEHSS+GVKESNPYNKLFEERIIFLGVQVDDASAND+MAQLLVLE
Sbjct 4 NPNMLPHSRYILPSFIEHSSYGVKESNPYNKLFEERIIFLGVQVDDASANDVMAQLLVLE 63
Query 65 SLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKR 124
S DPDRDITMYINSPGG FTSLMAIYDTMQYVRADI TVCLGQAASAAAVLLAAG+PGKR
Sbjct 64 SQDPDRDITMYINSPGGSFTSLMAIYDTMQYVRADITTVCLGQAASAAAVLLAAGSPGKR 123
Query 125 MALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTD 184
+ALPNARVLIHQPS G +QGQ SDLEIQA EIERMR LMETTL+RH+GK A IRKD+D
Sbjct 124 LALPNARVLIHQPSTGG-MQGQVSDLEIQAREIERMRRLMETTLSRHSGKTAEQIRKDSD 182
Query 185 RDKILTAEEAKDYGIIDTVLEYRKLSAQT 213
RD ILTAEEAKDYGIID VLEYRKLS T
Sbjct 183 RDLILTAEEAKDYGIIDNVLEYRKLSLTT 211
>gi|336325183|ref|YP_004605149.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
resistens DSM 45100]
gi|336101165|gb|AEI08985.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
resistens DSM 45100]
Length=206
Score = 344 bits (882), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 178/203 (88%), Positives = 185/203 (92%), Gaps = 1/203 (0%)
Query 10 PQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPD 69
P+ RYILPSF+EHSS+G KESNPYNKLFEERIIFLG QVDDASANDIMAQLLVLE LDPD
Sbjct 4 PEMRYILPSFVEHSSYGAKESNPYNKLFEERIIFLGTQVDDASANDIMAQLLVLEGLDPD 63
Query 70 RDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPN 129
RDITMYINSPGG FTSLMAIYDTMQYVR D+QTVCLGQAASAAAVLLAAGTPGKR ALPN
Sbjct 64 RDITMYINSPGGSFTSLMAIYDTMQYVRPDVQTVCLGQAASAAAVLLAAGTPGKRAALPN 123
Query 130 ARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKIL 189
ARVLIHQP+ GV QGQ SDLEIQA EIERMRTLMETTLARHTG+ A IR DTDRDKIL
Sbjct 124 ARVLIHQPATGGV-QGQVSDLEIQAKEIERMRTLMETTLARHTGRSAEQIRIDTDRDKIL 182
Query 190 TAEEAKDYGIIDTVLEYRKLSAQ 212
TAEEAK+YGIID V EYRKLSAQ
Sbjct 183 TAEEAKEYGIIDQVFEYRKLSAQ 205
>gi|319947980|ref|ZP_08022157.1| ATP-dependent Clp protease proteolytic subunit [Dietzia cinnamea
P4]
gi|319438326|gb|EFV93269.1| ATP-dependent Clp protease proteolytic subunit [Dietzia cinnamea
P4]
Length=207
Score = 342 bits (877), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 177/202 (88%), Positives = 185/202 (92%), Gaps = 1/202 (0%)
Query 10 PQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPD 69
P +RYILPSF+EHSS+GVKESNPYNKLFEERIIFLG QVDDASANDIMAQLLVLE DPD
Sbjct 5 PSSRYILPSFVEHSSYGVKESNPYNKLFEERIIFLGTQVDDASANDIMAQLLVLEGQDPD 64
Query 70 RDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPN 129
RDITMYINSPGG FTSLMAIYDTMQYVR D+ TVCLGQAASAAAVLLAAGT GKR ALPN
Sbjct 65 RDITMYINSPGGSFTSLMAIYDTMQYVRPDVVTVCLGQAASAAAVLLAAGTKGKRAALPN 124
Query 130 ARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKIL 189
AR+LIHQP+ G IQGQ SDLEIQAAEIERMR LMETTLARHTG+DA IRKDTDRDKIL
Sbjct 125 ARILIHQPATGG-IQGQVSDLEIQAAEIERMRRLMETTLARHTGRDADQIRKDTDRDKIL 183
Query 190 TAEEAKDYGIIDTVLEYRKLSA 211
TAEEAKDYGIIDTV +YRKLSA
Sbjct 184 TAEEAKDYGIIDTVFDYRKLSA 205
>gi|260578313|ref|ZP_05846229.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Corynebacterium
jeikeium ATCC 43734]
gi|258603615|gb|EEW16876.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Corynebacterium
jeikeium ATCC 43734]
Length=209
Score = 339 bits (869), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 174/203 (86%), Positives = 183/203 (91%), Gaps = 1/203 (0%)
Query 10 PQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPD 69
P+ RYILPSF+EHSS+G KESNPYNKLFEERIIFLG QVDDASANDIMAQLLVLE LDPD
Sbjct 7 PEMRYILPSFVEHSSYGAKESNPYNKLFEERIIFLGTQVDDASANDIMAQLLVLEGLDPD 66
Query 70 RDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPN 129
RDITMYINSPGG FTSLMAIYDTMQYVR D+QTVCLGQAASAAAVLLAAGTPGKR ALPN
Sbjct 67 RDITMYINSPGGSFTSLMAIYDTMQYVRPDVQTVCLGQAASAAAVLLAAGTPGKRAALPN 126
Query 130 ARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKIL 189
ARVLIHQP+ GV QGQ SDLEIQA EIERMR LME TLARHTGK A +R DTDRDKIL
Sbjct 127 ARVLIHQPATGGV-QGQVSDLEIQAKEIERMRKLMEETLARHTGKSAEQVRIDTDRDKIL 185
Query 190 TAEEAKDYGIIDTVLEYRKLSAQ 212
TAEEAK+YGI+D V +YRKLSAQ
Sbjct 186 TAEEAKEYGIVDQVFDYRKLSAQ 208
>gi|68535617|ref|YP_250322.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
jeikeium K411]
gi|109878267|sp|Q4JWV3.1|CLPP2_CORJK RecName: Full=ATP-dependent Clp protease proteolytic subunit
2; AltName: Full=Endopeptidase Clp 2
gi|68263216|emb|CAI36704.1| ATP-dependent Clp protease proteolytic subunit 2 [Corynebacterium
jeikeium K411]
Length=209
Score = 339 bits (869), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 174/204 (86%), Positives = 183/204 (90%), Gaps = 1/204 (0%)
Query 10 PQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPD 69
P+ RYILPSF+EHSS+G KESNPYNKLFEERIIFLG QVDDASANDIMAQLLVLE LDPD
Sbjct 7 PEMRYILPSFVEHSSYGAKESNPYNKLFEERIIFLGTQVDDASANDIMAQLLVLEGLDPD 66
Query 70 RDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPN 129
RDITMYINSPGG FTSLMAIYDTMQYVR D+QTVCLGQAASAAAVLLAAGTPGKR ALPN
Sbjct 67 RDITMYINSPGGSFTSLMAIYDTMQYVRPDVQTVCLGQAASAAAVLLAAGTPGKRAALPN 126
Query 130 ARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKIL 189
ARVLIHQP+ GV QGQ SDLEIQA EIERMR LME TLARHTGK A +R DTDRDKIL
Sbjct 127 ARVLIHQPATGGV-QGQVSDLEIQAKEIERMRKLMEETLARHTGKSAEQVRIDTDRDKIL 185
Query 190 TAEEAKDYGIIDTVLEYRKLSAQT 213
TAEEAK+YGI+D V +YRKLSAQ
Sbjct 186 TAEEAKEYGIVDQVFDYRKLSAQN 209
>gi|334564682|ref|ZP_08517673.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
bovis DSM 20582]
Length=237
Score = 336 bits (862), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 173/204 (85%), Positives = 184/204 (91%), Gaps = 1/204 (0%)
Query 10 PQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPD 69
P +RYILPSF+EHS++G KESNPYNKLFEERIIFLG QVDDASANDIMAQLLVLE LDPD
Sbjct 35 PTSRYILPSFVEHSTYGAKESNPYNKLFEERIIFLGTQVDDASANDIMAQLLVLEGLDPD 94
Query 70 RDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPN 129
RDITMYINSPGG FTSLMAIYDTMQYVR D+ TVCLGQAASAAAVLLAAGTPGKR ALPN
Sbjct 95 RDITMYINSPGGSFTSLMAIYDTMQYVRPDVVTVCLGQAASAAAVLLAAGTPGKRAALPN 154
Query 130 ARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKIL 189
ARVLIHQP+ GV QGQ SDLEIQA EIERMRTLMETTLARHTG+ A +R DTDRDKIL
Sbjct 155 ARVLIHQPATGGV-QGQVSDLEIQAKEIERMRTLMETTLARHTGRTAEQVRIDTDRDKIL 213
Query 190 TAEEAKDYGIIDTVLEYRKLSAQT 213
TA EAK+YGIID V +YRKLSAQ+
Sbjct 214 TAAEAKEYGIIDQVFDYRKLSAQS 237
>gi|237785950|ref|YP_002906655.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
kroppenstedtii DSM 44385]
gi|237758862|gb|ACR18112.1| ATP-dependent Clp protease proteolytic subunit 2 [Corynebacterium
kroppenstedtii DSM 44385]
Length=228
Score = 336 bits (861), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 175/203 (87%), Positives = 182/203 (90%), Gaps = 1/203 (0%)
Query 10 PQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPD 69
P++RYILPSF+EHSSFG KESNPYNKLFEERIIFLG QVDDASANDIMAQLLVLE LDPD
Sbjct 26 PESRYILPSFVEHSSFGAKESNPYNKLFEERIIFLGTQVDDASANDIMAQLLVLEGLDPD 85
Query 70 RDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPN 129
RDITMYINSPGG FTSLMAIYDTMQYVR D+ TVCLGQAASAAAVLLAAGTPGKR ALPN
Sbjct 86 RDITMYINSPGGSFTSLMAIYDTMQYVRPDVVTVCLGQAASAAAVLLAAGTPGKRAALPN 145
Query 130 ARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKIL 189
ARVLIHQP+ G QGQ SDLEIQAAEIERMRTLMETTLARHTG A IR DTDRDKIL
Sbjct 146 ARVLIHQPATQGT-QGQVSDLEIQAAEIERMRTLMETTLARHTGVSAEQIRIDTDRDKIL 204
Query 190 TAEEAKDYGIIDTVLEYRKLSAQ 212
TAE AK+YGIID V +YRK SAQ
Sbjct 205 TAEGAKEYGIIDQVFDYRKASAQ 227
>gi|172041059|ref|YP_001800773.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
urealyticum DSM 7109]
gi|171852363|emb|CAQ05339.1| ATP-dependent Clp protease proteolytic subunit 2 [Corynebacterium
urealyticum DSM 7109]
Length=206
Score = 336 bits (861), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 174/203 (86%), Positives = 183/203 (91%), Gaps = 1/203 (0%)
Query 10 PQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPD 69
P++RYILPSF+EHSS+G KESNPYNKLFEERIIFLG QVDDA+ANDIMAQLLVLE LDPD
Sbjct 4 PESRYILPSFVEHSSYGAKESNPYNKLFEERIIFLGTQVDDAAANDIMAQLLVLEGLDPD 63
Query 70 RDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPN 129
RDITMYINSPGG FTSLMAIYDTMQYVR D+QTVCLGQAASAAAVLLAAGTPGKR ALPN
Sbjct 64 RDITMYINSPGGSFTSLMAIYDTMQYVRPDVQTVCLGQAASAAAVLLAAGTPGKRAALPN 123
Query 130 ARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKIL 189
ARVLIHQP+ SG +QGQ SDLEIQA EIERMR LMETTLARHTGK IR DTDRDKIL
Sbjct 124 ARVLIHQPA-SGGVQGQVSDLEIQANEIERMRKLMETTLARHTGKTEEQIRIDTDRDKIL 182
Query 190 TAEEAKDYGIIDTVLEYRKLSAQ 212
AE AK+YGIID V EYRKLSAQ
Sbjct 183 DAEAAKEYGIIDQVFEYRKLSAQ 205
>gi|340793852|ref|YP_004759315.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
variabile DSM 44702]
gi|340533762|gb|AEK36242.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
variabile DSM 44702]
Length=227
Score = 331 bits (848), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 171/203 (85%), Positives = 181/203 (90%), Gaps = 1/203 (0%)
Query 10 PQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPD 69
PQ+RYILPSF+EHSS+G KESNPYNKLFEERIIFLG QVDDASANDIMAQLLVLE LDPD
Sbjct 25 PQSRYILPSFVEHSSYGAKESNPYNKLFEERIIFLGTQVDDASANDIMAQLLVLEGLDPD 84
Query 70 RDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPN 129
RDITMYINSPGG FTSLMAIYDTMQYVR DI TVCLGQAASAAAVLLAAGTPGKR ALPN
Sbjct 85 RDITMYINSPGGSFTSLMAIYDTMQYVRPDIVTVCLGQAASAAAVLLAAGTPGKRAALPN 144
Query 130 ARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKIL 189
+RVLIHQP+ G QGQ SDLEIQA EIERMR LME TL+RHTG+ A +R DTDRDK L
Sbjct 145 SRVLIHQPATQGT-QGQVSDLEIQAREIERMRRLMEETLSRHTGQTAEQVRLDTDRDKFL 203
Query 190 TAEEAKDYGIIDTVLEYRKLSAQ 212
TA+EAK+YGIID V EYRKLSAQ
Sbjct 204 TADEAKEYGIIDQVFEYRKLSAQ 226
>gi|317508501|ref|ZP_07966168.1| Clp protease [Segniliparus rugosus ATCC BAA-974]
gi|316253192|gb|EFV12595.1| Clp protease [Segniliparus rugosus ATCC BAA-974]
Length=210
Score = 331 bits (848), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 172/208 (83%), Positives = 184/208 (89%), Gaps = 1/208 (0%)
Query 6 SQIQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLES 65
+ IQP +RYI+PSFIEH+S GVKE+NPY KLFEERIIFLG QVDD SANDIMAQLLVLES
Sbjct 2 NHIQPTSRYIVPSFIEHTSTGVKETNPYTKLFEERIIFLGTQVDDTSANDIMAQLLVLES 61
Query 66 LDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRM 125
LDPDRDITMYINSPGG FTSLMAIYDTMQ+V DI TVCLGQAASAAAVLLAAGTPGKR
Sbjct 62 LDPDRDITMYINSPGGSFTSLMAIYDTMQFVHCDIATVCLGQAASAAAVLLAAGTPGKRA 121
Query 126 ALPNARVLIHQPSL-SGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTD 184
ALPNARVLIHQP + G I+GQ +DLEIQAAEIERMR LMETTLA HTGK A +RKDTD
Sbjct 122 ALPNARVLIHQPRIDGGAIRGQATDLEIQAAEIERMRRLMETTLATHTGKSADEVRKDTD 181
Query 185 RDKILTAEEAKDYGIIDTVLEYRKLSAQ 212
RDKILTAEEAK+YGIIDTV YRK SA+
Sbjct 182 RDKILTAEEAKEYGIIDTVYPYRKKSAK 209
>gi|213966164|ref|ZP_03394350.1| Clp protease [Corynebacterium amycolatum SK46]
gi|213951179|gb|EEB62575.1| Clp protease [Corynebacterium amycolatum SK46]
Length=209
Score = 328 bits (841), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 171/207 (83%), Positives = 182/207 (88%), Gaps = 1/207 (0%)
Query 5 NSQIQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLE 64
N+ PQ+RY+LPSF+EHSSFG KESNPYNKLFEERIIFLG QVDD +ANDIMAQLLVLE
Sbjct 4 NNMQMPQSRYVLPSFVEHSSFGAKESNPYNKLFEERIIFLGSQVDDTAANDIMAQLLVLE 63
Query 65 SLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKR 124
LDPDRDITMYINSPGG FTSLMAIYDTMQYVR D+QTVCLGQAASAAAVLLAAG PGKR
Sbjct 64 GLDPDRDITMYINSPGGSFTSLMAIYDTMQYVRPDVQTVCLGQAASAAAVLLAAGAPGKR 123
Query 125 MALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTD 184
ALPNARVLIHQP+ G IQGQ SDLEIQA EIERMR LME TLARH+G+ A IRKDTD
Sbjct 124 AALPNARVLIHQPATQG-IQGQVSDLEIQANEIERMRKLMEETLARHSGRTAEQIRKDTD 182
Query 185 RDKILTAEEAKDYGIIDTVLEYRKLSA 211
RDKILTAEEA +YGIID V EYRK +A
Sbjct 183 RDKILTAEEAVEYGIIDQVFEYRKHNA 209
>gi|296394282|ref|YP_003659166.1| endopeptidase Clp [Segniliparus rotundus DSM 44985]
gi|296181429|gb|ADG98335.1| Endopeptidase Clp [Segniliparus rotundus DSM 44985]
Length=210
Score = 326 bits (836), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 169/206 (83%), Positives = 183/206 (89%), Gaps = 1/206 (0%)
Query 8 IQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLD 67
IQP +RYI+PSFIEH+S GVKE+NPY KLFEERIIFLG QVDD SANDIMAQLLVLESLD
Sbjct 4 IQPSSRYIVPSFIEHTSTGVKETNPYTKLFEERIIFLGTQVDDTSANDIMAQLLVLESLD 63
Query 68 PDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMAL 127
PDRDIT+YINSPGG FTSLMAIYDTMQ+V DI TVCLGQAASAAAVLLAAGTPGKR AL
Sbjct 64 PDRDITIYINSPGGSFTSLMAIYDTMQFVHCDIATVCLGQAASAAAVLLAAGTPGKRAAL 123
Query 128 PNARVLIHQPSL-SGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRD 186
PNARVLIHQP + G I+GQ +DLEIQAAEIERMR LME TL+RHTGK A +RKDTDRD
Sbjct 124 PNARVLIHQPRIEGGAIRGQATDLEIQAAEIERMRRLMEETLSRHTGKTADEVRKDTDRD 183
Query 187 KILTAEEAKDYGIIDTVLEYRKLSAQ 212
KILTA+EAKDYGIID+V YRK SA+
Sbjct 184 KILTAQEAKDYGIIDSVYPYRKKSAK 209
>gi|226307301|ref|YP_002767261.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodococcus
erythropolis PR4]
gi|229493206|ref|ZP_04386998.1| Clp protease [Rhodococcus erythropolis SK121]
gi|226186418|dbj|BAH34522.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodococcus
erythropolis PR4]
gi|229319937|gb|EEN85766.1| Clp protease [Rhodococcus erythropolis SK121]
Length=220
Score = 324 bits (830), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 167/203 (83%), Positives = 180/203 (89%), Gaps = 1/203 (0%)
Query 10 PQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPD 69
PQ+RYILP F E +S+GVK S+PYNKLFEERIIFLG QVDD SAND+MAQLLVLES DPD
Sbjct 18 PQSRYILPQFTEQTSYGVKTSDPYNKLFEERIIFLGSQVDDVSANDLMAQLLVLESQDPD 77
Query 70 RDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPN 129
RDITMYINSPGG FT+LMAIYDTMQYVRADI TVCLGQAASAAAVLLA GTPGKR ALPN
Sbjct 78 RDITMYINSPGGSFTALMAIYDTMQYVRADISTVCLGQAASAAAVLLAGGTPGKRFALPN 137
Query 130 ARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKIL 189
+R+LIHQP+ G IQGQ SDLEIQAAEIERMR LME+TL+ HTGKD IR DTDRDKIL
Sbjct 138 SRILIHQPATGG-IQGQVSDLEIQAAEIERMRRLMESTLSLHTGKDPETIRVDTDRDKIL 196
Query 190 TAEEAKDYGIIDTVLEYRKLSAQ 212
TAE+AK+YGIID VL YRKLSAQ
Sbjct 197 TAEQAKEYGIIDDVLAYRKLSAQ 219
>gi|256375294|ref|YP_003098954.1| endopeptidase Clp [Actinosynnema mirum DSM 43827]
gi|255919597|gb|ACU35108.1| Endopeptidase Clp [Actinosynnema mirum DSM 43827]
Length=209
Score = 315 bits (808), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 160/204 (79%), Positives = 181/204 (89%), Gaps = 1/204 (0%)
Query 10 PQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPD 69
PQ+RY+LPSF+E +S+GVKESNPYNKLFEERIIFLGVQVDDASAND+MAQLLVLES DPD
Sbjct 7 PQSRYVLPSFVERTSYGVKESNPYNKLFEERIIFLGVQVDDASANDVMAQLLVLESEDPD 66
Query 70 RDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPN 129
RDI MYINSPGG FTSLMAIYDTMQ+VR DIQT CLGQA+SAAAVLLAAGTPGKR ALPN
Sbjct 67 RDILMYINSPGGSFTSLMAIYDTMQFVRPDIQTYCLGQASSAAAVLLAAGTPGKRHALPN 126
Query 130 ARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKIL 189
ARVLIHQP+ GV GQ SDLEIQ+ EI+R+R L+E+TLA HT + +R D +RDKIL
Sbjct 127 ARVLIHQPATEGVY-GQVSDLEIQSNEIQRVRRLLESTLAHHTNRSPEQVRADIERDKIL 185
Query 190 TAEEAKDYGIIDTVLEYRKLSAQT 213
TAEEAK+YGI+DTVL YRKLSA++
Sbjct 186 TAEEAKEYGIVDTVLPYRKLSARS 209
>gi|38234362|ref|NP_940129.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
diphtheriae NCTC 13129]
gi|67460485|sp|Q6NFU5.1|CLPP1_CORDI RecName: Full=ATP-dependent Clp protease proteolytic subunit
1; AltName: Full=Endopeptidase Clp 1
gi|38200625|emb|CAE50321.1| ATP-dependent Clp protease proteolytic subunit 2 [Corynebacterium
diphtheriae]
Length=209
Score = 314 bits (805), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 163/209 (78%), Positives = 178/209 (86%), Gaps = 1/209 (0%)
Query 3 SQNSQIQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLV 62
+ N PQARY+LPSFIE S++G KE+NPY KLFEERIIFLG QVDD SANDIMAQLLV
Sbjct 2 NNNGMQMPQARYVLPSFIEQSAYGTKETNPYAKLFEERIIFLGTQVDDTSANDIMAQLLV 61
Query 63 LESLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPG 122
LE LDPDRDITMYINSPGG FTSLMAIYDTMQYVR D++TVCLGQAASAAAVLLAAG PG
Sbjct 62 LEGLDPDRDITMYINSPGGSFTSLMAIYDTMQYVRPDVRTVCLGQAASAAAVLLAAGAPG 121
Query 123 KRMALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKD 182
KR LPN+RVLIHQP+ G QGQ SDLEIQA EIERMRTLME TLARHTG+ A +R D
Sbjct 122 KRACLPNSRVLIHQPATQGT-QGQVSDLEIQAKEIERMRTLMEQTLARHTGRSAEQVRID 180
Query 183 TDRDKILTAEEAKDYGIIDTVLEYRKLSA 211
TDRDKILTAEEA +YGI+D V +YRKL+
Sbjct 181 TDRDKILTAEEAVEYGIVDQVFDYRKLNG 209
>gi|300780630|ref|ZP_07090485.1| endopeptidase Clp [Corynebacterium genitalium ATCC 33030]
gi|300533616|gb|EFK54676.1| endopeptidase Clp [Corynebacterium genitalium ATCC 33030]
Length=206
Score = 314 bits (804), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 162/202 (81%), Positives = 177/202 (88%), Gaps = 1/202 (0%)
Query 10 PQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPD 69
P +RY+LPSFIE SS+G KE+NPY+KLFEERIIFLG QVDD SANDIMAQLLVLES DPD
Sbjct 6 PNSRYVLPSFIEQSSYGTKETNPYSKLFEERIIFLGTQVDDTSANDIMAQLLVLESQDPD 65
Query 70 RDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPN 129
RDITMYINSPGG FTSLMAIYDTMQYVR D+QTVCLGQAASAAAV+LAAG PGKR ALPN
Sbjct 66 RDITMYINSPGGSFTSLMAIYDTMQYVRPDVQTVCLGQAASAAAVILAAGAPGKRAALPN 125
Query 130 ARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKIL 189
+RVLIHQP+ G QGQ SDLEIQA EIERMR LME TLARH+G+ A +R DTDRDKIL
Sbjct 126 SRVLIHQPATQGT-QGQVSDLEIQAQEIERMRRLMEETLARHSGRTAEQVRIDTDRDKIL 184
Query 190 TAEEAKDYGIIDTVLEYRKLSA 211
TAEEA +YGIID V +YRKL+A
Sbjct 185 TAEEAVEYGIIDQVFDYRKLNA 206
>gi|227503045|ref|ZP_03933094.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
accolens ATCC 49725]
gi|306836722|ref|ZP_07469685.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
accolens ATCC 49726]
gi|227076106|gb|EEI14069.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
accolens ATCC 49725]
gi|304567400|gb|EFM43002.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
accolens ATCC 49726]
Length=207
Score = 313 bits (802), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 164/207 (80%), Positives = 179/207 (87%), Gaps = 1/207 (0%)
Query 5 NSQIQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLE 64
N P +RY+LPSFIE S+ G KE+NPY+KLFEERIIFLG QVDD SANDIMAQLLVLE
Sbjct 2 NKSQMPSSRYVLPSFIEQSAQGTKETNPYSKLFEERIIFLGTQVDDTSANDIMAQLLVLE 61
Query 65 SLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKR 124
S DPDRDITMYINSPGG FT+LMAIYDTM+YVR D+QTVCLGQAASAAAVLLAAG PGKR
Sbjct 62 SQDPDRDITMYINSPGGSFTALMAIYDTMRYVRPDVQTVCLGQAASAAAVLLAAGAPGKR 121
Query 125 MALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTD 184
ALPN+RVLIHQP+ G QGQ SDLEIQAAEIERMRTLME TLA HTG+ A IR DTD
Sbjct 122 AALPNSRVLIHQPATQGT-QGQVSDLEIQAAEIERMRTLMENTLAEHTGRTAEQIRIDTD 180
Query 185 RDKILTAEEAKDYGIIDTVLEYRKLSA 211
RDKILTAE+A +YGIIDTV EYRKL++
Sbjct 181 RDKILTAEDAVEYGIIDTVFEYRKLNS 207
>gi|225021669|ref|ZP_03710861.1| hypothetical protein CORMATOL_01697 [Corynebacterium matruchotii
ATCC 33806]
gi|305680976|ref|ZP_07403783.1| endopeptidase Clp [Corynebacterium matruchotii ATCC 14266]
gi|224945660|gb|EEG26869.1| hypothetical protein CORMATOL_01697 [Corynebacterium matruchotii
ATCC 33806]
gi|305659181|gb|EFM48681.1| endopeptidase Clp [Corynebacterium matruchotii ATCC 14266]
Length=212
Score = 313 bits (801), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 163/202 (81%), Positives = 178/202 (89%), Gaps = 1/202 (0%)
Query 10 PQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPD 69
P ARY+LPSFIE S++G KE+NPY KLFEERIIFLG QVDD SANDIMAQLLVLE LDPD
Sbjct 12 PTARYVLPSFIEQSAYGTKETNPYAKLFEERIIFLGTQVDDTSANDIMAQLLVLEGLDPD 71
Query 70 RDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPN 129
RDITMYINSPGG FTSLMAIYDTMQYVR D++TVCLGQAASAAAVLLAAG PGKR ALPN
Sbjct 72 RDITMYINSPGGSFTSLMAIYDTMQYVRPDVRTVCLGQAASAAAVLLAAGAPGKRAALPN 131
Query 130 ARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKIL 189
ARVLIHQP+ G +GQ SDLEIQAAEI+RMRTLME TLARHTG+ A I +DTDRDKIL
Sbjct 132 ARVLIHQPATEGA-RGQVSDLEIQAAEIQRMRTLMEETLARHTGRSAEQISEDTDRDKIL 190
Query 190 TAEEAKDYGIIDTVLEYRKLSA 211
TA+EA +YGIID V +YRKL+A
Sbjct 191 TAQEALEYGIIDQVFDYRKLNA 212
>gi|255325481|ref|ZP_05366583.1| Clp protease [Corynebacterium tuberculostearicum SK141]
gi|311741273|ref|ZP_07715097.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
pseudogenitalium ATCC 33035]
gi|255297419|gb|EET76734.1| Clp protease [Corynebacterium tuberculostearicum SK141]
gi|311303443|gb|EFQ79522.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
pseudogenitalium ATCC 33035]
Length=207
Score = 311 bits (798), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 163/207 (79%), Positives = 179/207 (87%), Gaps = 1/207 (0%)
Query 5 NSQIQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLE 64
N P +RY+LPSFIE S+ G KE+NPY+KLFEERIIFLG QVDD SANDIMAQLLVLE
Sbjct 2 NQSQMPSSRYVLPSFIEQSAQGTKETNPYSKLFEERIIFLGTQVDDTSANDIMAQLLVLE 61
Query 65 SLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKR 124
S DPDRDITMYINSPGG FT+LMAIYDTM+YVR D+QTVCLGQAASAAAVLLAAG PGKR
Sbjct 62 SQDPDRDITMYINSPGGSFTALMAIYDTMRYVRPDVQTVCLGQAASAAAVLLAAGAPGKR 121
Query 125 MALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTD 184
ALPN+RVLIHQP+ G QGQ SDLEIQAAEIERMR LMETTL+ HTG+ A IR DTD
Sbjct 122 AALPNSRVLIHQPATQGT-QGQVSDLEIQAAEIERMRKLMETTLSEHTGRTAEQIRIDTD 180
Query 185 RDKILTAEEAKDYGIIDTVLEYRKLSA 211
RDKILTA+EA +YGIIDTV +YRKL+A
Sbjct 181 RDKILTAQEAVEYGIIDTVFDYRKLNA 207
>gi|300859021|ref|YP_003784004.1| hypothetical protein cpfrc_01604 [Corynebacterium pseudotuberculosis
FRC41]
gi|300686475|gb|ADK29397.1| hypothetical protein cpfrc_01604 [Corynebacterium pseudotuberculosis
FRC41]
gi|302206720|gb|ADL11062.1| ATP-dependent Clp protease proteolytic subunit 1 [Corynebacterium
pseudotuberculosis C231]
gi|302331274|gb|ADL21468.1| ATP-dependent Clp protease proteolytic subunit 1 [Corynebacterium
pseudotuberculosis 1002]
gi|341825406|gb|AEK92927.1| ATP-dependent Clp protease proteolytic subunit 1 [Corynebacterium
pseudotuberculosis PAT10]
Length=209
Score = 311 bits (797), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 160/202 (80%), Positives = 175/202 (87%), Gaps = 1/202 (0%)
Query 10 PQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPD 69
P ARY+LPSFIEHS++G KE+NPY KLFEERIIFLG QVDD SANDIMAQLLVLE LDPD
Sbjct 9 PSARYVLPSFIEHSTYGTKETNPYAKLFEERIIFLGTQVDDTSANDIMAQLLVLEGLDPD 68
Query 70 RDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPN 129
RDITMYINSPGG FTSLMAIYDTMQYVR D++TVCLGQAASAAAVLLAAG PGKR LPN
Sbjct 69 RDITMYINSPGGSFTSLMAIYDTMQYVRPDVRTVCLGQAASAAAVLLAAGAPGKRACLPN 128
Query 130 ARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKIL 189
+RVLIHQP+ G QGQ SDLEIQA EIERMRTLME TL+RHTG+ +R DTDRDKIL
Sbjct 129 SRVLIHQPATQGT-QGQVSDLEIQAKEIERMRTLMEQTLSRHTGRTPEQVRIDTDRDKIL 187
Query 190 TAEEAKDYGIIDTVLEYRKLSA 211
TA+EA +YGIID V +YRKL+
Sbjct 188 TAQEAVEYGIIDQVFDYRKLNG 209
>gi|256375241|ref|YP_003098901.1| endopeptidase Clp [Actinosynnema mirum DSM 43827]
gi|255919544|gb|ACU35055.1| Endopeptidase Clp [Actinosynnema mirum DSM 43827]
Length=209
Score = 311 bits (796), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 159/208 (77%), Positives = 180/208 (87%), Gaps = 1/208 (0%)
Query 5 NSQIQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLE 64
N PQARY+LPSF+E +S+GVKESNPYNKLFEERIIFLGVQVDD SAND+MAQLLVLE
Sbjct 2 NPNHLPQARYVLPSFVERTSYGVKESNPYNKLFEERIIFLGVQVDDTSANDVMAQLLVLE 61
Query 65 SLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKR 124
S DPDRDI MYINSPGG FT+LMAIYDTMQ+VR DI+TVCLGQA+SAAAVLLAAGTPGKR
Sbjct 62 SDDPDRDIYMYINSPGGSFTALMAIYDTMQFVRPDIRTVCLGQASSAAAVLLAAGTPGKR 121
Query 125 MALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTD 184
ALPNARV+IHQP++ GV +GQ SDLEIQAAEI RMRT ME L+RHTG+ + D D
Sbjct 122 TALPNARVMIHQPAMGGV-RGQVSDLEIQAAEITRMRTQMEEALSRHTGRTVEQVHTDID 180
Query 185 RDKILTAEEAKDYGIIDTVLEYRKLSAQ 212
RD+ILTA EA++YGIID V+ YRKLSA+
Sbjct 181 RDRILTAAEAQEYGIIDEVMPYRKLSAK 208
>gi|325000575|ref|ZP_08121687.1| endopeptidase Clp [Pseudonocardia sp. P1]
Length=230
Score = 310 bits (793), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 145/201 (73%), Positives = 174/201 (87%), Gaps = 1/201 (0%)
Query 11 QARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPDR 70
++RY+LPS++E +S+GVKESNPYNKLFEERIIFLG Q++D SAND MAQLLVLESLDPDR
Sbjct 27 RSRYVLPSYVERTSYGVKESNPYNKLFEERIIFLGEQINDTSANDTMAQLLVLESLDPDR 86
Query 71 DITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPNA 130
+I++YINSPGG FTSLMAIYDTMQ++R DIQTVCLGQAASAAAVLL AGTPG+RMA+ NA
Sbjct 87 EISLYINSPGGSFTSLMAIYDTMQFIRPDIQTVCLGQAASAAAVLLCAGTPGRRMAVENA 146
Query 131 RVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKILT 190
R+LIHQP+ GV GQ SDLEIQA EI R+R ME +ARH+ + A +R D DRDKILT
Sbjct 147 RILIHQPATEGVY-GQASDLEIQATEISRIRKRMEEVIARHSNRTAEQVRDDIDRDKILT 205
Query 191 AEEAKDYGIIDTVLEYRKLSA 211
AEEAK+YG++D +++ RKLSA
Sbjct 206 AEEAKEYGLVDEIVQSRKLSA 226
>gi|308276963|gb|ADO26862.1| ATP-dependent Clp protease proteolytic subunit 1 [Corynebacterium
pseudotuberculosis I19]
Length=209
Score = 310 bits (793), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 159/202 (79%), Positives = 175/202 (87%), Gaps = 1/202 (0%)
Query 10 PQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPD 69
P ARY+LPSFIEH+++G KE+NPY KLFEERIIFLG QVDD SANDIMAQLLVLE LDPD
Sbjct 9 PSARYVLPSFIEHATYGTKETNPYAKLFEERIIFLGTQVDDTSANDIMAQLLVLEGLDPD 68
Query 70 RDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPN 129
RDITMYINSPGG FTSLMAIYDTMQYVR D++TVCLGQAASAAAVLLAAG PGKR LPN
Sbjct 69 RDITMYINSPGGSFTSLMAIYDTMQYVRPDVRTVCLGQAASAAAVLLAAGAPGKRACLPN 128
Query 130 ARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKIL 189
+RVLIHQP+ G QGQ SDLEIQA EIERMRTLME TL+RHTG+ +R DTDRDKIL
Sbjct 129 SRVLIHQPATQGT-QGQVSDLEIQAKEIERMRTLMEQTLSRHTGRTPEQVRIDTDRDKIL 187
Query 190 TAEEAKDYGIIDTVLEYRKLSA 211
TA+EA +YGIID V +YRKL+
Sbjct 188 TAQEAVEYGIIDQVFDYRKLNG 209
>gi|337291365|ref|YP_004630386.1| hypothetical protein CULC22_01757 [Corynebacterium ulcerans BR-AD22]
gi|334697414|gb|AEG82211.1| hypothetical protein CULC809_01679 [Corynebacterium ulcerans
809]
gi|334699671|gb|AEG84467.1| hypothetical protein CULC22_01757 [Corynebacterium ulcerans BR-AD22]
Length=209
Score = 309 bits (791), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 159/202 (79%), Positives = 174/202 (87%), Gaps = 1/202 (0%)
Query 10 PQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPD 69
P ARY+LPSFIEHS++G KE+NPY KLFEERIIFLG QVDD SANDIMAQLLVLE LDPD
Sbjct 9 PSARYVLPSFIEHSTYGTKETNPYAKLFEERIIFLGTQVDDTSANDIMAQLLVLEGLDPD 68
Query 70 RDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPN 129
RDITMYINSPGG FTSLMAIYDTMQYVR D++TVCLGQAASAAAVLLAAG PGKR LPN
Sbjct 69 RDITMYINSPGGSFTSLMAIYDTMQYVRPDVRTVCLGQAASAAAVLLAAGAPGKRACLPN 128
Query 130 ARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKIL 189
+RVLIHQP+ G QGQ SDLEIQA EIERMR LME TL+RHTG+ +R DTDRDKIL
Sbjct 129 SRVLIHQPATQGT-QGQVSDLEIQAKEIERMRALMEQTLSRHTGRTPEQVRIDTDRDKIL 187
Query 190 TAEEAKDYGIIDTVLEYRKLSA 211
TA+EA +YGIID V +YRKL+
Sbjct 188 TAQEAVEYGIIDQVFDYRKLNG 209
>gi|19553609|ref|NP_601611.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
glutamicum ATCC 13032]
gi|62391253|ref|YP_226655.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
glutamicum ATCC 13032]
gi|145296393|ref|YP_001139214.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
glutamicum R]
gi|25008292|sp|Q8NN02.1|CLPP1_CORGL RecName: Full=ATP-dependent Clp protease proteolytic subunit
1; AltName: Full=Endopeptidase Clp 1
gi|21325182|dbj|BAB99804.1| Protease subunit of ATP-dependent Clp proteases [Corynebacterium
glutamicum ATCC 13032]
gi|41326593|emb|CAF21075.1| ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT CLPP2 [Corynebacterium
glutamicum ATCC 13032]
gi|140846313|dbj|BAF55312.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344044569|gb|EGV40245.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
glutamicum S9114]
Length=208
Score = 308 bits (790), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 160/200 (80%), Positives = 174/200 (87%), Gaps = 1/200 (0%)
Query 10 PQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPD 69
P +RY+LPSFIE S++G KE+NPY KLFEERIIFLG QVDD SANDIMAQLLVLE +DPD
Sbjct 8 PTSRYVLPSFIEQSAYGTKETNPYAKLFEERIIFLGTQVDDTSANDIMAQLLVLEGMDPD 67
Query 70 RDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPN 129
RDIT+YINSPGG FT+LMAIYDTMQYVR D+QTVCLGQAASAAAVLLAAG PGKR LPN
Sbjct 68 RDITLYINSPGGSFTALMAIYDTMQYVRPDVQTVCLGQAASAAAVLLAAGAPGKRAVLPN 127
Query 130 ARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKIL 189
+RVLIHQP+ G QGQ SDLEIQAAEIERMR LMETTLA HTGK A IR DTDRDKIL
Sbjct 128 SRVLIHQPATQGT-QGQVSDLEIQAAEIERMRRLMETTLAEHTGKTAEQIRIDTDRDKIL 186
Query 190 TAEEAKDYGIIDTVLEYRKL 209
TAEEA +YGI+D V +YRKL
Sbjct 187 TAEEALEYGIVDQVFDYRKL 206
>gi|25028867|ref|NP_738921.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
efficiens YS-314]
gi|259507929|ref|ZP_05750829.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Corynebacterium
efficiens YS-314]
gi|67460557|sp|Q8FN37.1|CLPP1_COREF RecName: Full=ATP-dependent Clp protease proteolytic subunit
1; AltName: Full=Endopeptidase Clp 1
gi|23494154|dbj|BAC19121.1| putative endopeptidase Clp chain P2 [Corynebacterium efficiens
YS-314]
gi|259164424|gb|EEW48978.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Corynebacterium
efficiens YS-314]
Length=208
Score = 308 bits (789), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 161/201 (81%), Positives = 175/201 (88%), Gaps = 1/201 (0%)
Query 10 PQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPD 69
P +RY+LPSFIE S++G KE+NPY KLFEERIIFLG QVDD SANDIMAQLLVLE +DPD
Sbjct 8 PSSRYVLPSFIEQSAYGTKETNPYAKLFEERIIFLGTQVDDTSANDIMAQLLVLEGMDPD 67
Query 70 RDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPN 129
RDITMYINSPGG FT+LMAIYDTMQYVR D+QTVCLGQAASAAAVLLAAG PGKR ALPN
Sbjct 68 RDITMYINSPGGSFTALMAIYDTMQYVRPDVQTVCLGQAASAAAVLLAAGAPGKRAALPN 127
Query 130 ARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKIL 189
ARVLIHQP+ G QGQ SDLEIQAAEIERMR LMETTL++HTGK IR DTDRDKIL
Sbjct 128 ARVLIHQPATQGT-QGQVSDLEIQAAEIERMRKLMETTLSQHTGKTPEQIRIDTDRDKIL 186
Query 190 TAEEAKDYGIIDTVLEYRKLS 210
TAE A +YGIID V +YRKL+
Sbjct 187 TAEGALEYGIIDQVFDYRKLN 207
>gi|296118750|ref|ZP_06837326.1| Clp protease [Corynebacterium ammoniagenes DSM 20306]
gi|295968239|gb|EFG81488.1| Clp protease [Corynebacterium ammoniagenes DSM 20306]
Length=207
Score = 308 bits (788), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 160/202 (80%), Positives = 176/202 (88%), Gaps = 1/202 (0%)
Query 10 PQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPD 69
P +RY+LPSFIE S+ G KE+NPY+KLFEERIIFLG QVDD SANDIMAQLLVLE +DPD
Sbjct 7 PSSRYVLPSFIEQSAQGTKETNPYSKLFEERIIFLGTQVDDTSANDIMAQLLVLEGMDPD 66
Query 70 RDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPN 129
RDITMYINSPGG FT+LMAIYDTM+YVR D+QTVCLGQAASAAAVLLAAG PGKR ALPN
Sbjct 67 RDITMYINSPGGSFTALMAIYDTMRYVRPDVQTVCLGQAASAAAVLLAAGAPGKRAALPN 126
Query 130 ARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKIL 189
+RVLIHQP+ G QGQ SDLEIQAAEIERMR LME TLA HTG+ A +R DTDRDKIL
Sbjct 127 SRVLIHQPATQGT-QGQVSDLEIQAAEIERMRRLMENTLAEHTGRTAEQVRIDTDRDKIL 185
Query 190 TAEEAKDYGIIDTVLEYRKLSA 211
TAEEA +YGIID V +YRKL+A
Sbjct 186 TAEEAVEYGIIDQVFDYRKLNA 207
>gi|257055263|ref|YP_003133095.1| ATP-dependent Clp protease proteolytic subunit ClpP [Saccharomonospora
viridis DSM 43017]
gi|256585135|gb|ACU96268.1| ATP-dependent Clp protease proteolytic subunit ClpP [Saccharomonospora
viridis DSM 43017]
Length=209
Score = 306 bits (783), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 158/201 (79%), Positives = 176/201 (88%), Gaps = 1/201 (0%)
Query 10 PQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPD 69
PQARYILPS++E +S+GVKESNPYNKL+EER I LGVQVDDASAND+MAQLL LE DPD
Sbjct 7 PQARYILPSYVERTSYGVKESNPYNKLYEERQIMLGVQVDDASANDVMAQLLHLEHEDPD 66
Query 70 RDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPN 129
RDIT+YINSPGG FT++MAIYDTMQYVR DIQTVCLGQAASAAAVLLAAGT GKR+ALPN
Sbjct 67 RDITLYINSPGGSFTAMMAIYDTMQYVRPDIQTVCLGQAASAAAVLLAAGTKGKRLALPN 126
Query 130 ARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKIL 189
+RVLIHQP+ G GQ SDLEIQAAEI+R+R LMETTLA+HT K A +R D +RDKIL
Sbjct 127 SRVLIHQPATEGAY-GQVSDLEIQAAEIQRVRRLMETTLAKHTNKSADEVRVDIERDKIL 185
Query 190 TAEEAKDYGIIDTVLEYRKLS 210
T EEAK+YGIID VLEYRK S
Sbjct 186 TPEEAKEYGIIDHVLEYRKAS 206
>gi|227548722|ref|ZP_03978771.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
lipophiloflavum DSM 44291]
gi|227079189|gb|EEI17152.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
lipophiloflavum DSM 44291]
Length=206
Score = 305 bits (781), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 156/201 (78%), Positives = 175/201 (88%), Gaps = 1/201 (0%)
Query 10 PQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPD 69
P +RY+LP F+E +SFG K+ +PY KLFEERI+FLG QVDD SAND+MAQLLVLES DPD
Sbjct 6 PTSRYVLPQFLEETSFGTKQIDPYGKLFEERIVFLGTQVDDTSANDVMAQLLVLESQDPD 65
Query 70 RDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPN 129
RDITMYINSPGG FT+LMAIYDTMQYVR D+QTVCLGQAASAAAV+LAAG PGKR ALPN
Sbjct 66 RDITMYINSPGGSFTALMAIYDTMQYVRPDVQTVCLGQAASAAAVILAAGAPGKRAALPN 125
Query 130 ARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKIL 189
+RVLIHQP+ G QGQ SDLEIQAAEIERMR LME+TLA HTG+ A IRKDTDRDKIL
Sbjct 126 SRVLIHQPATQGT-QGQVSDLEIQAAEIERMRRLMESTLAEHTGRSAEQIRKDTDRDKIL 184
Query 190 TAEEAKDYGIIDTVLEYRKLS 210
TA+EA +YGIID V +YRKL+
Sbjct 185 TADEAVEYGIIDQVFDYRKLN 205
>gi|300788576|ref|YP_003768867.1| protease subunit of ATP-dependent Clp protease [Amycolatopsis
mediterranei U32]
gi|299798090|gb|ADJ48465.1| protease subunit of ATP-dependent Clp protease [Amycolatopsis
mediterranei U32]
gi|340530183|gb|AEK45388.1| protease subunit of ATP-dependent Clp protease [Amycolatopsis
mediterranei S699]
Length=217
Score = 305 bits (780), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 158/202 (79%), Positives = 174/202 (87%), Gaps = 1/202 (0%)
Query 10 PQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPD 69
PQ+RYILPS++E +S+GVKESNPYNKL+EER+IFLGVQVDDASAND+MAQLL LE DPD
Sbjct 16 PQSRYILPSYVERTSYGVKESNPYNKLYEERVIFLGVQVDDASANDVMAQLLHLEHEDPD 75
Query 70 RDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPN 129
RDI +YINSPGG FTSLMAIYDTMQ+VR DIQT CLGQAASAAAVLL+AGTPGKR ALPN
Sbjct 76 RDILIYINSPGGSFTSLMAIYDTMQFVRPDIQTYCLGQAASAAAVLLSAGTPGKRYALPN 135
Query 130 ARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKIL 189
+RVLIHQP+ G GQ SDLEIQA EI+R+R ME LA HTGKDA IRKD +RDKIL
Sbjct 136 SRVLIHQPATEGTY-GQVSDLEIQANEIQRVRRQMEVILAHHTGKDADQIRKDIERDKIL 194
Query 190 TAEEAKDYGIIDTVLEYRKLSA 211
TAEEAK YGIID VL YRK SA
Sbjct 195 TAEEAKSYGIIDEVLPYRKASA 216
>gi|227488327|ref|ZP_03918643.1| endopeptidase Clp [Corynebacterium glucuronolyticum ATCC 51867]
gi|227091737|gb|EEI27049.1| endopeptidase Clp [Corynebacterium glucuronolyticum ATCC 51867]
Length=207
Score = 303 bits (776), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 164/204 (81%), Positives = 177/204 (87%), Gaps = 1/204 (0%)
Query 7 QIQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESL 66
Q PQARYILPSF+EHSS+G KESNPYNKLFEERIIFLG QVDD SANDIMAQLLVLE L
Sbjct 4 QNMPQARYILPSFVEHSSYGAKESNPYNKLFEERIIFLGAQVDDTSANDIMAQLLVLEGL 63
Query 67 DPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMA 126
DPDRDITMYINSPGG FTSLMAIYDTMQYVR D++TVCLGQAASAAAVLLAAG GKR A
Sbjct 64 DPDRDITMYINSPGGSFTSLMAIYDTMQYVRPDVRTVCLGQAASAAAVLLAAGAKGKRAA 123
Query 127 LPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRD 186
LPNARVLIHQP+ G QGQ SDLEIQA EIERMR LME TLA HTG+ + +R DTDRD
Sbjct 124 LPNARVLIHQPATQGT-QGQVSDLEIQAREIERMRKLMEDTLAHHTGQTSEQVRIDTDRD 182
Query 187 KILTAEEAKDYGIIDTVLEYRKLS 210
KILTA+EA +YG+ID V +YRKL+
Sbjct 183 KILTAQEAVEYGLIDEVFDYRKLN 206
Lambda K H
0.318 0.133 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 254328062080
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40