BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2461c Length=200 Score E Sequences producing significant alignments: (Bits) Value gi|15841985|ref|NP_337022.1| ATP-dependent Clp protease proteoly... 410 7e-113 gi|88192658|pdb|2CBY|A Chain A, Crystal Structure Of The Atp-Dep... 409 9e-113 gi|126030155|pdb|2C8T|A Chain A, The 3.0 A Resolution Structure ... 409 1e-112 gi|308405118|ref|ZP_07494258.2| ATP-dependent clp protease prote... 404 4e-111 gi|15827778|ref|NP_302041.1| ATP-dependent Clp protease proteoly... 394 4e-108 gi|18281939|sp|Q9CBY3.2|CLPP1_MYCLE RecName: Full=ATP-dependent ... 392 2e-107 gi|118618992|ref|YP_907324.1| ATP-dependent Clp protease proteol... 390 4e-107 gi|240170932|ref|ZP_04749591.1| ATP-dependent Clp protease prote... 386 8e-106 gi|254821428|ref|ZP_05226429.1| ATP-dependent Clp protease prote... 382 2e-104 gi|342857857|ref|ZP_08714513.1| ATP-dependent Clp protease prote... 378 2e-103 gi|296170471|ref|ZP_06852059.1| ATP-dependent Clp protease prote... 378 2e-103 gi|289448104|ref|ZP_06437848.1| LOW QUALITY PROTEIN: ATP-depende... 377 5e-103 gi|41408379|ref|NP_961215.1| ATP-dependent Clp protease proteoly... 375 3e-102 gi|254774529|ref|ZP_05216045.1| ATP-dependent Clp protease prote... 372 2e-101 gi|118471482|ref|YP_888936.1| ATP-dependent Clp protease proteol... 370 8e-101 gi|333990087|ref|YP_004522701.1| ATP-dependent Clp protease prot... 367 4e-100 gi|145223175|ref|YP_001133853.1| ATP-dependent Clp protease prot... 357 4e-97 gi|120404994|ref|YP_954823.1| ATP-dependent Clp protease proteol... 357 5e-97 gi|315443632|ref|YP_004076511.1| ATP-dependent Clp protease prot... 356 1e-96 gi|108800544|ref|YP_640741.1| ATP-dependent Clp protease proteol... 350 8e-95 gi|169628671|ref|YP_001702320.1| ATP-dependent Clp protease prot... 337 7e-91 gi|296394283|ref|YP_003659167.1| endopeptidase Clp [Segniliparus... 321 5e-86 gi|326382826|ref|ZP_08204516.1| ATP-dependent Clp protease prote... 315 2e-84 gi|317508500|ref|ZP_07966167.1| Clp protease [Segniliparus rugos... 313 9e-84 gi|343927525|ref|ZP_08766995.1| ATP-dependent Clp protease prote... 311 4e-83 gi|262201986|ref|YP_003273194.1| endopeptidase Clp [Gordonia bro... 310 7e-83 gi|237785951|ref|YP_002906656.1| ATP-dependent Clp protease prot... 307 6e-82 gi|334564683|ref|ZP_08517674.1| ATP-dependent Clp protease prote... 304 6e-81 gi|296139184|ref|YP_003646427.1| endopeptidase Clp [Tsukamurella... 303 1e-80 gi|325676029|ref|ZP_08155712.1| ATP-dependent Clp protease, prot... 299 2e-79 gi|312140361|ref|YP_004007697.1| clp peptidase proteolytic subun... 298 2e-79 gi|336325182|ref|YP_004605148.1| ATP-dependent Clp protease prot... 297 7e-79 gi|68535616|ref|YP_250321.1| ATP-dependent Clp protease proteoly... 296 8e-79 gi|260578314|ref|ZP_05846230.1| ATP-dependent Clp protease, prot... 296 9e-79 gi|227833714|ref|YP_002835421.1| ATP-dependent Clp protease prot... 296 9e-79 gi|172041060|ref|YP_001800774.1| ATP-dependent Clp protease prot... 296 1e-78 gi|333918759|ref|YP_004492340.1| ATP-dependent Clp protease prot... 296 1e-78 gi|227504047|ref|ZP_03934096.1| ATP-dependent Clp protease prote... 296 1e-78 gi|226307302|ref|YP_002767262.1| ATP-dependent Clp protease prot... 296 1e-78 gi|226360502|ref|YP_002778280.1| ATP-dependent Clp protease prot... 295 2e-78 gi|300859022|ref|YP_003784005.1| ATP-dependent Clp protease prot... 295 3e-78 gi|111018382|ref|YP_701354.1| ATP-dependent Clp protease proteol... 295 3e-78 gi|319947981|ref|ZP_08022158.1| ATP-dependent Clp protease prote... 294 4e-78 gi|337291366|ref|YP_004630387.1| ATP-dependent Clp protease prot... 294 5e-78 gi|305681092|ref|ZP_07403899.1| endopeptidase Clp [Corynebacteri... 293 9e-78 gi|255325480|ref|ZP_05366582.1| Clp protease [Corynebacterium tu... 293 9e-78 gi|225021668|ref|ZP_03710860.1| hypothetical protein CORMATOL_01... 293 1e-77 gi|227542940|ref|ZP_03972989.1| ATP-dependent Clp protease prote... 293 1e-77 gi|227488326|ref|ZP_03918642.1| ATP-dependent Clp protease prote... 292 2e-77 gi|300780629|ref|ZP_07090484.1| endopeptidase Clp [Corynebacteri... 290 6e-77 >gi|15841985|ref|NP_337022.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium tuberculosis CDC1551] gi|31793642|ref|NP_856135.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium bovis AF2122/97] gi|57116992|ref|YP_177883.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium tuberculosis H37Rv] 92 more sequence titles Length=200 Score = 410 bits (1053), Expect = 7e-113, Method: Compositional matrix adjust. Identities = 199/200 (99%), Positives = 200/200 (100%), Gaps = 0/200 (0%) Query 1 VSQVTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDI 60 +SQVTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDI Sbjct 1 MSQVTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDI 60 Query 61 SLYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARI 120 SLYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARI Sbjct 61 SLYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARI 120 Query 121 LMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEA 180 LMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEA Sbjct 121 LMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEA 180 Query 181 LEYGFVDHIITRAHVNGEAQ 200 LEYGFVDHIITRAHVNGEAQ Sbjct 181 LEYGFVDHIITRAHVNGEAQ 200 >gi|88192658|pdb|2CBY|A Chain A, Crystal Structure Of The Atp-Dependent Clp Protease Proteolytic Subunit 1 (Clpp1) From Mycobacterium Tuberculosis gi|88192659|pdb|2CBY|B Chain B, Crystal Structure Of The Atp-Dependent Clp Protease Proteolytic Subunit 1 (Clpp1) From Mycobacterium Tuberculosis gi|88192660|pdb|2CBY|C Chain C, Crystal Structure Of The Atp-Dependent Clp Protease Proteolytic Subunit 1 (Clpp1) From Mycobacterium Tuberculosis gi|88192661|pdb|2CBY|D Chain D, Crystal Structure Of The Atp-Dependent Clp Protease Proteolytic Subunit 1 (Clpp1) From Mycobacterium Tuberculosis gi|88192662|pdb|2CBY|E Chain E, Crystal Structure Of The Atp-Dependent Clp Protease Proteolytic Subunit 1 (Clpp1) From Mycobacterium Tuberculosis gi|88192663|pdb|2CBY|F Chain F, Crystal Structure Of The Atp-Dependent Clp Protease Proteolytic Subunit 1 (Clpp1) From Mycobacterium Tuberculosis gi|88192664|pdb|2CBY|G Chain G, Crystal Structure Of The Atp-Dependent Clp Protease Proteolytic Subunit 1 (Clpp1) From Mycobacterium Tuberculosis Length=208 Score = 409 bits (1052), Expect = 9e-113, Method: Compositional matrix adjust. Identities = 199/200 (99%), Positives = 200/200 (100%), Gaps = 0/200 (0%) Query 1 VSQVTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDI 60 +SQVTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDI Sbjct 1 MSQVTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDI 60 Query 61 SLYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARI 120 SLYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARI Sbjct 61 SLYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARI 120 Query 121 LMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEA 180 LMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEA Sbjct 121 LMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEA 180 Query 181 LEYGFVDHIITRAHVNGEAQ 200 LEYGFVDHIITRAHVNGEAQ Sbjct 181 LEYGFVDHIITRAHVNGEAQ 200 >gi|126030155|pdb|2C8T|A Chain A, The 3.0 A Resolution Structure Of Caseinolytic Clp Protease 1 From Mycobacterium Tuberculosis gi|126030156|pdb|2C8T|B Chain B, The 3.0 A Resolution Structure Of Caseinolytic Clp Protease 1 From Mycobacterium Tuberculosis gi|126030157|pdb|2C8T|C Chain C, The 3.0 A Resolution Structure Of Caseinolytic Clp Protease 1 From Mycobacterium Tuberculosis 11 more sequence titles Length=206 Score = 409 bits (1051), Expect = 1e-112, Method: Compositional matrix adjust. Identities = 199/199 (100%), Positives = 199/199 (100%), Gaps = 0/199 (0%) Query 2 SQVTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDIS 61 SQVTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDIS Sbjct 3 SQVTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDIS 62 Query 62 LYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARIL 121 LYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARIL Sbjct 63 LYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARIL 122 Query 122 MHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEAL 181 MHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEAL Sbjct 123 MHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEAL 182 Query 182 EYGFVDHIITRAHVNGEAQ 200 EYGFVDHIITRAHVNGEAQ Sbjct 183 EYGFVDHIITRAHVNGEAQ 201 >gi|308405118|ref|ZP_07494258.2| ATP-dependent clp protease proteolytic subunit 1 clpP1 [Mycobacterium tuberculosis SUMu012] gi|308365324|gb|EFP54175.1| ATP-dependent clp protease proteolytic subunit 1 clpP1 [Mycobacterium tuberculosis SUMu012] Length=197 Score = 404 bits (1038), Expect = 4e-111, Method: Compositional matrix adjust. Identities = 196/197 (99%), Positives = 197/197 (100%), Gaps = 0/197 (0%) Query 4 VTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLY 63 +TDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLY Sbjct 1 MTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLY 60 Query 64 INSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMH 123 INSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMH Sbjct 61 INSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMH 120 Query 124 QPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEY 183 QPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEY Sbjct 121 QPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEY 180 Query 184 GFVDHIITRAHVNGEAQ 200 GFVDHIITRAHVNGEAQ Sbjct 181 GFVDHIITRAHVNGEAQ 197 >gi|15827778|ref|NP_302041.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium leprae TN] gi|221230255|ref|YP_002503671.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium leprae Br4923] gi|13093330|emb|CAC30430.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium leprae] gi|219933362|emb|CAR71574.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium leprae Br4923] Length=224 Score = 394 bits (1012), Expect = 4e-108, Method: Compositional matrix adjust. Identities = 190/200 (95%), Positives = 194/200 (97%), Gaps = 0/200 (0%) Query 1 VSQVTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDI 60 V VTD+RSNSQG +LTDSVYERLLSERIIFLGSEVND IANRLCAQILLLAAEDA KDI Sbjct 25 VGHVTDIRSNSQGFNLTDSVYERLLSERIIFLGSEVNDNIANRLCAQILLLAAEDAFKDI 84 Query 61 SLYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARI 120 SLYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGT+GKRYALPHARI Sbjct 85 SLYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTRGKRYALPHARI 144 Query 121 LMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEA 180 LMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTA+EA Sbjct 145 LMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTASEA 204 Query 181 LEYGFVDHIITRAHVNGEAQ 200 LEYGFVDHIITRAHVNGE Q Sbjct 205 LEYGFVDHIITRAHVNGEVQ 224 >gi|18281939|sp|Q9CBY3.2|CLPP1_MYCLE RecName: Full=ATP-dependent Clp protease proteolytic subunit 1; AltName: Full=Endopeptidase Clp 1 Length=200 Score = 392 bits (1006), Expect = 2e-107, Method: Compositional matrix adjust. Identities = 189/200 (95%), Positives = 194/200 (97%), Gaps = 0/200 (0%) Query 1 VSQVTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDI 60 + VTD+RSNSQG +LTDSVYERLLSERIIFLGSEVND IANRLCAQILLLAAEDA KDI Sbjct 1 MGHVTDIRSNSQGFNLTDSVYERLLSERIIFLGSEVNDNIANRLCAQILLLAAEDAFKDI 60 Query 61 SLYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARI 120 SLYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGT+GKRYALPHARI Sbjct 61 SLYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTRGKRYALPHARI 120 Query 121 LMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEA 180 LMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTA+EA Sbjct 121 LMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTASEA 180 Query 181 LEYGFVDHIITRAHVNGEAQ 200 LEYGFVDHIITRAHVNGE Q Sbjct 181 LEYGFVDHIITRAHVNGEVQ 200 >gi|118618992|ref|YP_907324.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium ulcerans Agy99] gi|183983782|ref|YP_001852073.1| ATP-dependent Clp protease proteolytic subunit ClpP1 [Mycobacterium marinum M] gi|118571102|gb|ABL05853.1| ATP-dependent CLP protease proteolytic subunit 1 ClpP1 [Mycobacterium ulcerans Agy99] gi|183177108|gb|ACC42218.1| ATP-dependent CLP protease proteolytic subunit 1 ClpP1 [Mycobacterium marinum M] Length=198 Score = 390 bits (1003), Expect = 4e-107, Method: Compositional matrix adjust. Identities = 191/198 (97%), Positives = 195/198 (99%), Gaps = 1/198 (0%) Query 4 VTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLY 63 +TDMRSNSQGL+LTDSVYERLLSERIIFLGSEVNDE+ANRLCAQILLLAAEDASKDI+LY Sbjct 1 MTDMRSNSQGLNLTDSVYERLLSERIIFLGSEVNDEVANRLCAQILLLAAEDASKDINLY 60 Query 64 INSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMH 123 INSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMH Sbjct 61 INSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMH 120 Query 124 QPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEY 183 QPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQ IERIEADSDRDRWFTA EALEY Sbjct 121 QPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQSIERIEADSDRDRWFTAPEALEY 180 Query 184 GFVDHIITR-AHVNGEAQ 200 GFVDHIITR AHVNGEAQ Sbjct 181 GFVDHIITRAAHVNGEAQ 198 >gi|240170932|ref|ZP_04749591.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium kansasii ATCC 12478] Length=202 Score = 386 bits (992), Expect = 8e-106, Method: Compositional matrix adjust. Identities = 189/202 (94%), Positives = 193/202 (96%), Gaps = 2/202 (0%) Query 1 VSQVTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDI 60 +SQVT MRSNSQGLSLTDSVYERLLSERIIFLGSEVND++ANRLCAQILLLAAED +KDI Sbjct 1 MSQVTGMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDDVANRLCAQILLLAAEDPTKDI 60 Query 61 SLYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARI 120 SLYINSPGGSISAGMAIYDTM LAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARI Sbjct 61 SLYINSPGGSISAGMAIYDTMTLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARI 120 Query 121 LMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEA 180 LMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTA EA Sbjct 121 LMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAPEA 180 Query 181 LEYGFVDHIITRAH--VNGEAQ 200 LEYGFVDHIITRA NGE Q Sbjct 181 LEYGFVDHIITRATSVTNGEMQ 202 >gi|254821428|ref|ZP_05226429.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium intracellulare ATCC 13950] Length=199 Score = 382 bits (980), Expect = 2e-104, Method: Compositional matrix adjust. Identities = 188/199 (95%), Positives = 194/199 (98%), Gaps = 2/199 (1%) Query 4 VTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLY 63 +TDMRSNSQGL+LTDSVYERLLSERIIFLGSEV+DEIANRLCAQILLLAAED++KDISLY Sbjct 1 MTDMRSNSQGLNLTDSVYERLLSERIIFLGSEVSDEIANRLCAQILLLAAEDSTKDISLY 60 Query 64 INSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMH 123 INSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMH Sbjct 61 INSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMH 120 Query 124 QPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEY 183 QPLGGVTGSAADIAIQAEQF VIKKEMFRLNAEFTGQ IERIEADSDRDRWFTA EALEY Sbjct 121 QPLGGVTGSAADIAIQAEQFHVIKKEMFRLNAEFTGQSIERIEADSDRDRWFTAQEALEY 180 Query 184 GFVDHIITR-AHV-NGEAQ 200 GFVDHIITR AH+ NGEAQ Sbjct 181 GFVDHIITRAAHITNGEAQ 199 >gi|342857857|ref|ZP_08714513.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium colombiense CECT 3035] gi|342135190|gb|EGT88356.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium colombiense CECT 3035] Length=196 Score = 378 bits (971), Expect = 2e-103, Method: Compositional matrix adjust. Identities = 187/196 (96%), Positives = 191/196 (98%), Gaps = 2/196 (1%) Query 7 MRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINS 66 MRSNSQGL+LTDSVYERLLSERIIFLGSEV+DEIANRLCAQILLLAAEDA+KDISLYINS Sbjct 1 MRSNSQGLNLTDSVYERLLSERIIFLGSEVSDEIANRLCAQILLLAAEDATKDISLYINS 60 Query 67 PGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPL 126 PGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPL Sbjct 61 PGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPL 120 Query 127 GGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFV 186 GGVTGSAADIAIQAEQF VIKKEMFRLNAEFTGQ IERIEADSDRDRWFTA EALEYGFV Sbjct 121 GGVTGSAADIAIQAEQFTVIKKEMFRLNAEFTGQSIERIEADSDRDRWFTAQEALEYGFV 180 Query 187 DHIITR-AHV-NGEAQ 200 DHIITR AH+ NGEAQ Sbjct 181 DHIITRAAHITNGEAQ 196 >gi|296170471|ref|ZP_06852059.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894942|gb|EFG74663.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium parascrofulaceum ATCC BAA-614] Length=199 Score = 378 bits (971), Expect = 2e-103, Method: Compositional matrix adjust. Identities = 187/199 (94%), Positives = 192/199 (97%), Gaps = 2/199 (1%) Query 4 VTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLY 63 ++DMRS SQGL+LTDSVYERLLSERIIFLGSEVNDE+ANRLCAQILLLAAEDA KDISLY Sbjct 1 MSDMRSPSQGLNLTDSVYERLLSERIIFLGSEVNDEVANRLCAQILLLAAEDADKDISLY 60 Query 64 INSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMH 123 INSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMH Sbjct 61 INSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMH 120 Query 124 QPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEY 183 QPLGGVTGSAADIAIQAEQF VIKKEMFRLNAEFTGQ IERIEADSDRDRWFTA EALEY Sbjct 121 QPLGGVTGSAADIAIQAEQFHVIKKEMFRLNAEFTGQSIERIEADSDRDRWFTAQEALEY 180 Query 184 GFVDHIITR-AHV-NGEAQ 200 GFVDHIITR AH+ NGEAQ Sbjct 181 GFVDHIITRAAHITNGEAQ 199 >gi|289448104|ref|ZP_06437848.1| LOW QUALITY PROTEIN: ATP-dependent clp protease proteolytic subunit 2 clpP2 [Mycobacterium tuberculosis CPHL_A] gi|289421062|gb|EFD18263.1| LOW QUALITY PROTEIN: ATP-dependent clp protease proteolytic subunit 2 clpP2 [Mycobacterium tuberculosis CPHL_A] Length=200 Score = 377 bits (968), Expect = 5e-103, Method: Compositional matrix adjust. Identities = 184/185 (99%), Positives = 185/185 (100%), Gaps = 0/185 (0%) Query 1 VSQVTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDI 60 +SQVTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDI Sbjct 1 MSQVTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDI 60 Query 61 SLYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARI 120 SLYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARI Sbjct 61 SLYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARI 120 Query 121 LMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEA 180 LMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEA Sbjct 121 LMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEA 180 Query 181 LEYGF 185 LEYGF Sbjct 181 LEYGF 185 >gi|41408379|ref|NP_961215.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium avium subsp. paratuberculosis K-10] gi|118462557|ref|YP_880940.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium avium 104] gi|67460505|sp|Q73XM8.1|CLPP2_MYCPA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|41396735|gb|AAS04598.1| ClpP [Mycobacterium avium subsp. paratuberculosis K-10] gi|118163844|gb|ABK64741.1| Clp protease [Mycobacterium avium 104] gi|336458285|gb|EGO37265.1| protease subunit of ATP-dependent protease [Mycobacterium avium subsp. paratuberculosis S397] Length=199 Score = 375 bits (962), Expect = 3e-102, Method: Compositional matrix adjust. Identities = 184/199 (93%), Positives = 190/199 (96%), Gaps = 2/199 (1%) Query 4 VTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLY 63 ++DMRS SQGL+LTDSVYERLLSERIIFLGSEVND++ANRLCAQILLLAAED +KDISLY Sbjct 1 MSDMRSPSQGLNLTDSVYERLLSERIIFLGSEVNDDVANRLCAQILLLAAEDPTKDISLY 60 Query 64 INSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMH 123 INSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMH Sbjct 61 INSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMH 120 Query 124 QPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEY 183 QPLGGVTGSAADIAIQAEQF VIKKEMFRLNAEFTGQ IERIEADSDRDRWFTA EALEY Sbjct 121 QPLGGVTGSAADIAIQAEQFHVIKKEMFRLNAEFTGQSIERIEADSDRDRWFTAQEALEY 180 Query 184 GFVDHIITRAH--VNGEAQ 200 GFVDHIITRA NGEAQ Sbjct 181 GFVDHIITRAATITNGEAQ 199 >gi|254774529|ref|ZP_05216045.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium avium subsp. avium ATCC 25291] Length=196 Score = 372 bits (954), Expect = 2e-101, Method: Compositional matrix adjust. Identities = 183/196 (94%), Positives = 187/196 (96%), Gaps = 2/196 (1%) Query 7 MRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINS 66 MRS SQGL+LTDSVYERLLSERIIFLGSEVND++ANRLCAQILLLAAED +KDISLYINS Sbjct 1 MRSPSQGLNLTDSVYERLLSERIIFLGSEVNDDVANRLCAQILLLAAEDPTKDISLYINS 60 Query 67 PGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPL 126 PGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPL Sbjct 61 PGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPL 120 Query 127 GGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFV 186 GGVTGSAADIAIQAEQF VIKKEMFRLNAEFTGQ IERIEADSDRDRWFTA EALEYGFV Sbjct 121 GGVTGSAADIAIQAEQFHVIKKEMFRLNAEFTGQSIERIEADSDRDRWFTAQEALEYGFV 180 Query 187 DHIITRAH--VNGEAQ 200 DHIITRA NGEAQ Sbjct 181 DHIITRAATITNGEAQ 196 >gi|118471482|ref|YP_888936.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium smegmatis str. MC2 155] gi|118172769|gb|ABK73665.1| Clp protease [Mycobacterium smegmatis str. MC2 155] Length=203 Score = 370 bits (949), Expect = 8e-101, Method: Compositional matrix adjust. Identities = 178/195 (92%), Positives = 186/195 (96%), Gaps = 0/195 (0%) Query 4 VTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLY 63 +TDMR QGL+L DSVYERLL+ERIIFLGS+V+D+IANRLCAQILLL+AED +KDI LY Sbjct 1 MTDMRGTGQGLNLVDSVYERLLAERIIFLGSQVDDDIANRLCAQILLLSAEDPTKDIHLY 60 Query 64 INSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMH 123 INSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMH Sbjct 61 INSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMH 120 Query 124 QPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEY 183 QPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTA EALEY Sbjct 121 QPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAQEALEY 180 Query 184 GFVDHIITRAHVNGE 198 GFVDHIIT A VNGE Sbjct 181 GFVDHIITSASVNGE 195 >gi|333990087|ref|YP_004522701.1| ATP-dependent Clp protease proteolytic subunit ClpP1 [Mycobacterium sp. JDM601] gi|333486055|gb|AEF35447.1| ATP-dependent Clp protease proteolytic subunit ClpP1 [Mycobacterium sp. JDM601] Length=192 Score = 367 bits (943), Expect = 4e-100, Method: Compositional matrix adjust. Identities = 176/187 (95%), Positives = 183/187 (98%), Gaps = 0/187 (0%) Query 13 GLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINSPGGSIS 72 GL+L DSVYERLL ERIIFLGS+V+D+IANRLCAQILLLAAED +KDISLYINSPGGSIS Sbjct 5 GLNLVDSVYERLLRERIIFLGSQVDDDIANRLCAQILLLAAEDPTKDISLYINSPGGSIS 64 Query 73 AGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGS 132 AGMAIYDTMVLAPCD+ATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGS Sbjct 65 AGMAIYDTMVLAPCDVATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGS 124 Query 133 AADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFVDHIITR 192 AADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTA EALEYGFVDHIITR Sbjct 125 AADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAQEALEYGFVDHIITR 184 Query 193 AHVNGEA 199 AHVNG+A Sbjct 185 AHVNGDA 191 >gi|145223175|ref|YP_001133853.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium gilvum PYR-GCK] gi|145215661|gb|ABP45065.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mycobacterium gilvum PYR-GCK] Length=218 Score = 357 bits (917), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 171/194 (89%), Positives = 181/194 (94%), Gaps = 0/194 (0%) Query 4 VTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLY 63 VTDMR S GL+L DSVYERLL+ERIIFLGS+V+D+IANRLCAQILLL+AED +KDI LY Sbjct 21 VTDMRGASSGLNLVDSVYERLLAERIIFLGSQVDDDIANRLCAQILLLSAEDPTKDIHLY 80 Query 64 INSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMH 123 INSPGGSISAGMAIYDTMVLAPCD+ATYAMGMAASMGEFLLAAGTKGKRYALPHARILMH Sbjct 81 INSPGGSISAGMAIYDTMVLAPCDVATYAMGMAASMGEFLLAAGTKGKRYALPHARILMH 140 Query 124 QPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEY 183 QPLGG+TG AADIAIQAEQFA IKKEMFRLNAEFTGQ IERIEADSDRDRWFTA EALEY Sbjct 141 QPLGGITGGAADIAIQAEQFASIKKEMFRLNAEFTGQTIERIEADSDRDRWFTAQEALEY 200 Query 184 GFVDHIITRAHVNG 197 GFVDHIIT + NG Sbjct 201 GFVDHIITSVNFNG 214 >gi|120404994|ref|YP_954823.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium vanbaalenii PYR-1] gi|119957812|gb|ABM14817.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mycobacterium vanbaalenii PYR-1] Length=194 Score = 357 bits (916), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 171/191 (90%), Positives = 180/191 (95%), Gaps = 0/191 (0%) Query 7 MRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINS 66 MR S GL+L DSVYERLLSERIIFLGS+V+D+IANRLCAQILLL+AED +KDI LYINS Sbjct 1 MRGASSGLNLVDSVYERLLSERIIFLGSQVDDDIANRLCAQILLLSAEDPTKDIHLYINS 60 Query 67 PGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPL 126 PGGSISAGMAIYDTMVLAPCD+ATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPL Sbjct 61 PGGSISAGMAIYDTMVLAPCDVATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPL 120 Query 127 GGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFV 186 GG+TG AADIAIQAEQFAVIKKEMFRLNAEFTGQ IERIEADSDRDRWFTA EALEYGFV Sbjct 121 GGITGGAADIAIQAEQFAVIKKEMFRLNAEFTGQTIERIEADSDRDRWFTAQEALEYGFV 180 Query 187 DHIITRAHVNG 197 DHIIT +VNG Sbjct 181 DHIITSTNVNG 191 >gi|315443632|ref|YP_004076511.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mycobacterium sp. Spyr1] gi|315261935|gb|ADT98676.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mycobacterium sp. Spyr1] Length=198 Score = 356 bits (913), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 170/194 (88%), Positives = 181/194 (94%), Gaps = 0/194 (0%) Query 4 VTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLY 63 +TDMR S GL+L DSVYERLL+ERIIFLGS+V+D+IANRLCAQILLL+AED +KDI LY Sbjct 1 MTDMRGASSGLNLVDSVYERLLAERIIFLGSQVDDDIANRLCAQILLLSAEDPTKDIHLY 60 Query 64 INSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMH 123 INSPGGSISAGMAIYDTMVLAPCD+ATYAMGMAASMGEFLLAAGTKGKRYALPHARILMH Sbjct 61 INSPGGSISAGMAIYDTMVLAPCDVATYAMGMAASMGEFLLAAGTKGKRYALPHARILMH 120 Query 124 QPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEY 183 QPLGG+TG AADIAIQAEQFA IKKEMFRLNAEFTGQ IERIEADSDRDRWFTA EALEY Sbjct 121 QPLGGITGGAADIAIQAEQFASIKKEMFRLNAEFTGQTIERIEADSDRDRWFTAQEALEY 180 Query 184 GFVDHIITRAHVNG 197 GFVDHIIT + NG Sbjct 181 GFVDHIITSVNFNG 194 >gi|108800544|ref|YP_640741.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium sp. MCS] gi|119869683|ref|YP_939635.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium sp. KMS] gi|126436160|ref|YP_001071851.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium sp. JLS] gi|108770963|gb|ABG09685.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mycobacterium sp. MCS] gi|119695772|gb|ABL92845.1| ATP-dependent Clp protease proteolytic subunit ClpP / ClpP1 peptidase, Serine peptidase, MEROPS family S14 [Mycobacterium sp. KMS] gi|126235960|gb|ABN99360.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mycobacterium sp. JLS] Length=195 Score = 350 bits (898), Expect = 8e-95, Method: Compositional matrix adjust. Identities = 167/190 (88%), Positives = 178/190 (94%), Gaps = 0/190 (0%) Query 7 MRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINS 66 MR + GL+L DSVYERLL+ERIIFLGS+V+D+IANRLCAQILLL+AED +KDI LYINS Sbjct 1 MRGGAPGLTLQDSVYERLLAERIIFLGSQVDDDIANRLCAQILLLSAEDPTKDIHLYINS 60 Query 67 PGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPL 126 PGGSISAGMAIYDTMVLAPCD+ATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPL Sbjct 61 PGGSISAGMAIYDTMVLAPCDVATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPL 120 Query 127 GGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFV 186 GG+TG AADIAIQAEQFA IKKEMFRLNAEFTGQ IERIEADSDRDRWFTA EALEYGFV Sbjct 121 GGITGGAADIAIQAEQFAAIKKEMFRLNAEFTGQTIERIEADSDRDRWFTAQEALEYGFV 180 Query 187 DHIITRAHVN 196 DHIIT A +N Sbjct 181 DHIITSASIN 190 >gi|169628671|ref|YP_001702320.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium abscessus ATCC 19977] gi|169240638|emb|CAM61666.1| ATP-dependent Clp protease, proteolytic subunit 2 [Mycobacterium abscessus] Length=197 Score = 337 bits (863), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 161/191 (85%), Positives = 176/191 (93%), Gaps = 0/191 (0%) Query 7 MRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINS 66 MRS + GL+L DSVYERLLSERIIFLG +V+D+IAN+LCAQILLL AED +KDI LYINS Sbjct 1 MRSATAGLNLIDSVYERLLSERIIFLGQQVDDDIANKLCAQILLLTAEDPTKDIHLYINS 60 Query 67 PGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPL 126 PGGSISAGMAI+DTM L+ CDIATYAMGMAASMGEFLLAAGTKGKR+ALPHARILMHQPL Sbjct 61 PGGSISAGMAIFDTMQLSECDIATYAMGMAASMGEFLLAAGTKGKRHALPHARILMHQPL 120 Query 127 GGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFV 186 GGVTGSA+DIAIQAEQF VIKKEMFRLNAEFTG+ IE+IE DSDRDRWFTA EALEYGFV Sbjct 121 GGVTGSASDIAIQAEQFQVIKKEMFRLNAEFTGKSIEQIEQDSDRDRWFTAPEALEYGFV 180 Query 187 DHIITRAHVNG 197 D IITR ++NG Sbjct 181 DKIITRGNLNG 191 >gi|296394283|ref|YP_003659167.1| endopeptidase Clp [Segniliparus rotundus DSM 44985] gi|296181430|gb|ADG98336.1| Endopeptidase Clp [Segniliparus rotundus DSM 44985] Length=200 Score = 321 bits (822), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 153/187 (82%), Positives = 167/187 (90%), Gaps = 0/187 (0%) Query 7 MRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINS 66 MRS GL+LTDSV+ERLL ERIIFLGSEV+D+IANRLCAQ+LLL AED SKDISLYINS Sbjct 8 MRSELSGLNLTDSVFERLLRERIIFLGSEVDDDIANRLCAQVLLLTAEDPSKDISLYINS 67 Query 67 PGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPL 126 PGGSISAGMAIYDTM L+ CDIATYAMGMAASMG+FLLAAG KGKRYALPHARI+MHQP Sbjct 68 PGGSISAGMAIYDTMQLSECDIATYAMGMAASMGQFLLAAGAKGKRYALPHARIMMHQPS 127 Query 127 GGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFV 186 G+ G+AADIAIQAEQ A KKEM RLNAEFTGQ +E+I DS+RDRWFTAAEA EYGFV Sbjct 128 AGIYGAAADIAIQAEQLAATKKEMTRLNAEFTGQTVEKIHEDSERDRWFTAAEAKEYGFV 187 Query 187 DHIITRA 193 DH+ITRA Sbjct 188 DHVITRA 194 >gi|326382826|ref|ZP_08204516.1| ATP-dependent Clp protease proteolytic subunit [Gordonia neofelifaecis NRRL B-59395] gi|326198416|gb|EGD55600.1| ATP-dependent Clp protease proteolytic subunit [Gordonia neofelifaecis NRRL B-59395] Length=238 Score = 315 bits (808), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 146/187 (79%), Positives = 169/187 (91%), Gaps = 0/187 (0%) Query 7 MRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINS 66 M S GL+LTDSV+ERLL ERIIFLG++V+D+IANRLCAQILLLAAED +KDI+LYINS Sbjct 48 MSSGVAGLNLTDSVFERLLRERIIFLGTQVDDDIANRLCAQILLLAAEDPTKDINLYINS 107 Query 67 PGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPL 126 PGGS++AGMAI+DTM LAPCD+ATYAMGMAASMG+FLLAAG KGKR+ALPHARI+MHQP Sbjct 108 PGGSVTAGMAIFDTMQLAPCDVATYAMGMAASMGQFLLAAGAKGKRHALPHARIMMHQPS 167 Query 127 GGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFV 186 G+ G+AADIAIQAEQFA K+EM RLNAEFTGQP+E+IEAD+DRD WFTA EA EYGFV Sbjct 168 AGIGGTAADIAIQAEQFAATKREMNRLNAEFTGQPLEKIEADADRDNWFTAEEAKEYGFV 227 Query 187 DHIITRA 193 DH++T A Sbjct 228 DHVVTSA 234 >gi|317508500|ref|ZP_07966167.1| Clp protease [Segniliparus rugosus ATCC BAA-974] gi|316253191|gb|EFV12594.1| Clp protease [Segniliparus rugosus ATCC BAA-974] Length=200 Score = 313 bits (802), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 148/187 (80%), Positives = 168/187 (90%), Gaps = 0/187 (0%) Query 7 MRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINS 66 MRS+ GL+LTDSV+ERLL ERIIFLGSEV+D+IANRLCAQILLL AED +KDISLYINS Sbjct 8 MRSDLAGLNLTDSVFERLLRERIIFLGSEVDDDIANRLCAQILLLTAEDPTKDISLYINS 67 Query 67 PGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPL 126 PGGSISAGMAIYDTM L+ C++ATYAMGMAASMG+FLLAAG KGKR+ALPHARI+MHQP Sbjct 68 PGGSISAGMAIYDTMQLSECEVATYAMGMAASMGQFLLAAGAKGKRFALPHARIMMHQPS 127 Query 127 GGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFV 186 G+ G+AADIAIQAEQ A KKEM RLNAEFTGQ +E+I DS+RDRWFTAAEA +YGFV Sbjct 128 AGIYGAAADIAIQAEQLAATKKEMTRLNAEFTGQTVEKIHEDSERDRWFTAAEAKDYGFV 187 Query 187 DHIITRA 193 DH+I+RA Sbjct 188 DHVISRA 194 >gi|343927525|ref|ZP_08766995.1| ATP-dependent Clp protease proteolytic subunit [Gordonia alkanivorans NBRC 16433] gi|343762513|dbj|GAA13921.1| ATP-dependent Clp protease proteolytic subunit [Gordonia alkanivorans NBRC 16433] Length=199 Score = 311 bits (797), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 144/186 (78%), Positives = 169/186 (91%), Gaps = 0/186 (0%) Query 7 MRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINS 66 M S GL+LTDSV+ERLL ERIIFLG++V+D+IANRLCAQILLLAAED +KDI LYINS Sbjct 11 MSSGVAGLNLTDSVFERLLRERIIFLGTQVDDDIANRLCAQILLLAAEDPTKDIHLYINS 70 Query 67 PGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPL 126 PGGS++AGMAI+DTM LA CD+ATYAMGMAASMG+FLLAAGTKGKR+ALPHARI+MHQP Sbjct 71 PGGSVTAGMAIFDTMQLAECDVATYAMGMAASMGQFLLAAGTKGKRHALPHARIMMHQPS 130 Query 127 GGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFV 186 G+ G+AADIAIQAEQFA+ KKEM +LNAEF+GQP+E+IEAD+DRD+WFTA EA EYGFV Sbjct 131 AGIGGTAADIAIQAEQFALTKKEMNKLNAEFSGQPLEKIEADADRDKWFTAEEAKEYGFV 190 Query 187 DHIITR 192 D +I+R Sbjct 191 DKVISR 196 >gi|262201986|ref|YP_003273194.1| endopeptidase Clp [Gordonia bronchialis DSM 43247] gi|262085333|gb|ACY21301.1| Endopeptidase Clp [Gordonia bronchialis DSM 43247] Length=207 Score = 310 bits (794), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 144/186 (78%), Positives = 167/186 (90%), Gaps = 0/186 (0%) Query 7 MRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINS 66 + S GL+LTDSV+ERLL ERIIFLG++V+D+IANRLCAQILLLAAED KDI+LYINS Sbjct 16 LSSGVAGLNLTDSVFERLLRERIIFLGTQVDDDIANRLCAQILLLAAEDPHKDINLYINS 75 Query 67 PGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPL 126 PGGS++AGMAI+DTM LA CD+ATYAMGMAASMG+FLLAAG KGKR+ALPHARI+MHQP Sbjct 76 PGGSVTAGMAIFDTMQLATCDVATYAMGMAASMGQFLLAAGAKGKRHALPHARIMMHQPS 135 Query 127 GGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFV 186 G+ G+AADIAIQAEQFA KKEM RLNAEF+GQP+E+IEAD+DRD+WFTA EA EYG V Sbjct 136 AGIGGTAADIAIQAEQFAATKKEMNRLNAEFSGQPLEKIEADADRDKWFTAEEAKEYGLV 195 Query 187 DHIITR 192 DH+ITR Sbjct 196 DHVITR 201 >gi|237785951|ref|YP_002906656.1| ATP-dependent Clp protease proteolytic subunit 1 [Corynebacterium kroppenstedtii DSM 44385] gi|237758863|gb|ACR18113.1| ATP-dependent Clp protease proteolytic subunit 1 [Corynebacterium kroppenstedtii DSM 44385] Length=212 Score = 307 bits (787), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 143/187 (77%), Positives = 164/187 (88%), Gaps = 0/187 (0%) Query 7 MRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINS 66 M + + GL+L DSV+ERLL ERIIFLG+EVND+IANRLCAQILLL+AED ++DISLYINS Sbjct 21 MDNGTAGLNLNDSVFERLLRERIIFLGTEVNDDIANRLCAQILLLSAEDPTRDISLYINS 80 Query 67 PGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPL 126 PGGS++AGMAIYDTM APCDIATY MG+AASMG+FLL AGTKGKRYALPHARILMHQP Sbjct 81 PGGSVTAGMAIYDTMTYAPCDIATYGMGLAASMGQFLLTAGTKGKRYALPHARILMHQPS 140 Query 127 GGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFV 186 GV G+AADIAIQAEQFA K+++ LNA+ TGQ +ERI+ DSDRDRWF A EALEYGFV Sbjct 141 AGVGGTAADIAIQAEQFARTKRDLAELNAQHTGQSLERIQKDSDRDRWFDAQEALEYGFV 200 Query 187 DHIITRA 193 DH+IT A Sbjct 201 DHVITSA 207 >gi|334564683|ref|ZP_08517674.1| ATP-dependent Clp protease proteolytic subunit 1 [Corynebacterium bovis DSM 20582] Length=213 Score = 304 bits (778), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 142/187 (76%), Positives = 165/187 (89%), Gaps = 0/187 (0%) Query 7 MRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINS 66 M + GL+L DSV+ERLL ERIIFLGS+V+D+IANRLCAQILLL+AED S+DISLYINS Sbjct 24 MADATAGLNLNDSVFERLLRERIIFLGSQVDDDIANRLCAQILLLSAEDPSRDISLYINS 83 Query 67 PGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPL 126 PGGS++AGMAI+DTM APCDIATY MG+AASMG+FLL+AGTKGKRYALPHARI+MHQP Sbjct 84 PGGSVTAGMAIFDTMQYAPCDIATYGMGLAASMGQFLLSAGTKGKRYALPHARIMMHQPS 143 Query 127 GGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFV 186 GV G+AADIAIQAEQFA K+EM L +E TGQP+E+I+ADSDRDRWF A EALEYGFV Sbjct 144 AGVGGTAADIAIQAEQFAATKREMAELISEHTGQPLEKIQADSDRDRWFNAHEALEYGFV 203 Query 187 DHIITRA 193 DH+I+ A Sbjct 204 DHVISSA 210 >gi|296139184|ref|YP_003646427.1| endopeptidase Clp [Tsukamurella paurometabola DSM 20162] gi|296027318|gb|ADG78088.1| Endopeptidase Clp [Tsukamurella paurometabola DSM 20162] Length=197 Score = 303 bits (776), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 142/187 (76%), Positives = 163/187 (88%), Gaps = 0/187 (0%) Query 7 MRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINS 66 MR+ GL+L DSVY RLL RIIFLGSEVND+IAN+LCAQ+LLL+AED SKDI+LYINS Sbjct 7 MRTGLAGLNLNDSVYSRLLESRIIFLGSEVNDDIANQLCAQMLLLSAEDPSKDINLYINS 66 Query 67 PGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPL 126 PGGSISAGMAI+DTM CD+ATYAMGMAASMGEFLLAAG KGKRYALPHARI+MHQP Sbjct 67 PGGSISAGMAIFDTMEFVECDVATYAMGMAASMGEFLLAAGAKGKRYALPHARIMMHQPS 126 Query 127 GGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFV 186 G+ G+AADIAIQAE F K EM RLNA+FTGQPIE+IEAD+DRD+WFTA +A +YGFV Sbjct 127 AGIGGTAADIAIQAELFRNTKVEMNRLNAQFTGQPIEKIEADADRDKWFTAEQARDYGFV 186 Query 187 DHIITRA 193 DH+++RA Sbjct 187 DHVVSRA 193 >gi|325676029|ref|ZP_08155712.1| ATP-dependent Clp protease, protease subunit [Rhodococcus equi ATCC 33707] gi|325553267|gb|EGD22946.1| ATP-dependent Clp protease, protease subunit [Rhodococcus equi ATCC 33707] Length=195 Score = 299 bits (765), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 139/193 (73%), Positives = 167/193 (87%), Gaps = 0/193 (0%) Query 7 MRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINS 66 M S + GL+L+DSVYERLL ERIIFLG++V+D+IAN+LCAQILLL+AED ++DI+LYINS Sbjct 1 MTSATSGLNLSDSVYERLLRERIIFLGTQVDDDIANKLCAQILLLSAEDPTRDINLYINS 60 Query 67 PGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPL 126 PGGS++AGMAIYDTM A CD+AT+ MG+AASMG+FLL+AGTKGKRYALPHARI+MHQP Sbjct 61 PGGSVTAGMAIYDTMQFAECDVATFGMGLAASMGQFLLSAGTKGKRYALPHARIMMHQPS 120 Query 127 GGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFV 186 G+ G+A+DIAI AEQFA K+EM L AE TGQ +E+I ADSDRDRWFTA EALEYGFV Sbjct 121 AGIGGTASDIAIMAEQFAHTKREMAELIAEHTGQTVEQITADSDRDRWFTAKEALEYGFV 180 Query 187 DHIITRAHVNGEA 199 DH++TRA G A Sbjct 181 DHVVTRARQAGGA 193 >gi|312140361|ref|YP_004007697.1| clp peptidase proteolytic subunit 1 clpp1 [Rhodococcus equi 103S] gi|311889700|emb|CBH49017.1| Clp peptidase proteolytic subunit 1 ClpP1 [Rhodococcus equi 103S] Length=202 Score = 298 bits (764), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 139/193 (73%), Positives = 167/193 (87%), Gaps = 0/193 (0%) Query 7 MRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINS 66 M S + GL+L+DSVYERLL ERIIFLG++V+D+IAN+LCAQILLL+AED ++DI+LYINS Sbjct 8 MTSATSGLNLSDSVYERLLRERIIFLGTQVDDDIANKLCAQILLLSAEDPTRDINLYINS 67 Query 67 PGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPL 126 PGGS++AGMAIYDTM A CD+AT+ MG+AASMG+FLL+AGTKGKRYALPHARI+MHQP Sbjct 68 PGGSVTAGMAIYDTMQFAECDVATFGMGLAASMGQFLLSAGTKGKRYALPHARIMMHQPS 127 Query 127 GGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFV 186 G+ G+A+DIAI AEQFA K+EM L AE TGQ +E+I ADSDRDRWFTA EALEYGFV Sbjct 128 AGIGGTASDIAIMAEQFAHTKREMAELIAEHTGQTVEQITADSDRDRWFTAKEALEYGFV 187 Query 187 DHIITRAHVNGEA 199 DH++TRA G A Sbjct 188 DHVVTRARQAGGA 200 >gi|336325182|ref|YP_004605148.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium resistens DSM 45100] gi|336101164|gb|AEI08984.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium resistens DSM 45100] Length=198 Score = 297 bits (760), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 139/179 (78%), Positives = 158/179 (89%), Gaps = 0/179 (0%) Query 15 SLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINSPGGSISAG 74 ++ D V+ERLL ERIIFLGS+V+DEIAN+LCAQILLLAAED +KDISLYINSPGGS++AG Sbjct 17 NMNDHVFERLLRERIIFLGSQVDDEIANKLCAQILLLAAEDPNKDISLYINSPGGSVTAG 76 Query 75 MAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAA 134 MAIYDTM APCDIATY MG+AASMG+FLL+AGTKGKRYALPHARI+MHQP GV G+AA Sbjct 77 MAIYDTMRYAPCDIATYGMGLAASMGQFLLSAGTKGKRYALPHARIMMHQPSAGVGGTAA 136 Query 135 DIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFVDHIITRA 193 DIAIQAEQFA K+EM L AEFTGQ +E+I DSDRDRWFTA +A EYGFVDH+IT A Sbjct 137 DIAIQAEQFAYTKREMAELIAEFTGQTVEQITKDSDRDRWFTAEQAKEYGFVDHVITSA 195 >gi|68535616|ref|YP_250321.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium jeikeium K411] gi|109878151|sp|Q4JWV4.1|CLPP1_CORJK RecName: Full=ATP-dependent Clp protease proteolytic subunit 1; AltName: Full=Endopeptidase Clp 1 gi|68263215|emb|CAI36703.1| ATP-dependent Clp protease proteolytic subunit 1 [Corynebacterium jeikeium K411] Length=188 Score = 296 bits (759), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 139/176 (79%), Positives = 156/176 (89%), Gaps = 0/176 (0%) Query 18 DSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINSPGGSISAGMAI 77 DSVYERLL ERIIFLGS+V+DEIAN LCAQILLL+AED ++DISLYINSPGGS++AGMAI Sbjct 10 DSVYERLLRERIIFLGSQVDDEIANELCAQILLLSAEDPTRDISLYINSPGGSVTAGMAI 69 Query 78 YDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIA 137 YDTM APCDIATY MG+AASMG+FLL+AGTKGKRYALPHARI+MHQP GV G+AADIA Sbjct 70 YDTMKYAPCDIATYGMGLAASMGQFLLSAGTKGKRYALPHARIMMHQPSAGVGGTAADIA 129 Query 138 IQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFVDHIITRA 193 IQAEQFA K+EM L AEFTGQ +E+I DSDRDRWFTA +A EYGFVDH+IT A Sbjct 130 IQAEQFAYTKREMAELIAEFTGQTVEQITKDSDRDRWFTAQQAKEYGFVDHVITSA 185 >gi|260578314|ref|ZP_05846230.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Corynebacterium jeikeium ATCC 43734] gi|258603616|gb|EEW16877.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Corynebacterium jeikeium ATCC 43734] Length=188 Score = 296 bits (759), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 139/176 (79%), Positives = 156/176 (89%), Gaps = 0/176 (0%) Query 18 DSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINSPGGSISAGMAI 77 DSVYERLL ERIIFLGS+V+DEIAN LCAQILLL+AED ++DISLYINSPGGS++AGMAI Sbjct 10 DSVYERLLRERIIFLGSQVDDEIANELCAQILLLSAEDPTRDISLYINSPGGSVTAGMAI 69 Query 78 YDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIA 137 YDTM APCDIATY MG+AASMG+FLL+AGTKGKRYALPHARI+MHQP GV G+AADIA Sbjct 70 YDTMKYAPCDIATYGMGLAASMGQFLLSAGTKGKRYALPHARIMMHQPSAGVGGTAADIA 129 Query 138 IQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFVDHIITRA 193 IQAEQFA K+EM L AEFTGQ +E+I DSDRDRWFTA +A EYGFVDH+IT A Sbjct 130 IQAEQFAYTKREMAELIAEFTGQTVEQITKDSDRDRWFTAEQAKEYGFVDHVITSA 185 >gi|227833714|ref|YP_002835421.1| ATP-dependent Clp protease proteolytic subunit 1 [Corynebacterium aurimucosum ATCC 700975] gi|262184721|ref|ZP_06044142.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium aurimucosum ATCC 700975] gi|227454730|gb|ACP33483.1| ATP-dependent Clp protease proteolytic subunit 1 [Corynebacterium aurimucosum ATCC 700975] Length=199 Score = 296 bits (759), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 140/197 (72%), Positives = 166/197 (85%), Gaps = 2/197 (1%) Query 1 VSQVTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDI 60 +S+ M S+S G++L+DSVYERLL ERIIFLG++V+DEIAN+LCAQILLL+AED ++DI Sbjct 1 MSEKISMNSSSTGMNLSDSVYERLLRERIIFLGTQVDDEIANKLCAQILLLSAEDPTRDI 60 Query 61 SLYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARI 120 SLYINSPGGS++AGMAIYDTM +PCD+ATY MG+AASMG+FLL+ GTKGKRYALPHARI Sbjct 61 SLYINSPGGSVTAGMAIYDTMKYSPCDVATYGMGLAASMGQFLLSGGTKGKRYALPHARI 120 Query 121 LMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEA 180 +MHQP GV G+AADIAIQAEQFA K+EM L AE TGQ E+I DSDRDRWFTA +A Sbjct 121 MMHQPSAGVGGTAADIAIQAEQFAQTKREMAELIAEHTGQTFEQITKDSDRDRWFTAQQA 180 Query 181 LEYGFVDHIITRAHVNG 197 EYG VDH+I VNG Sbjct 181 KEYGIVDHVI--ESVNG 195 >gi|172041060|ref|YP_001800774.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium urealyticum DSM 7109] gi|171852364|emb|CAQ05340.1| ATP-dependent Clp protease proteolytic subunit 1 [Corynebacterium urealyticum DSM 7109] Length=198 Score = 296 bits (759), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 139/185 (76%), Positives = 162/185 (88%), Gaps = 0/185 (0%) Query 9 SNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINSPG 68 +++ G++L DSV+ERLL ERIIFLGS+V+DEIAN+LCAQILLLAAED KDISLYINSPG Sbjct 11 ADTAGMNLNDSVFERLLRERIIFLGSQVDDEIANKLCAQILLLAAEDPEKDISLYINSPG 70 Query 69 GSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGG 128 GS++AGMAI+DTM APCDIATY MG+AASMG+FLL+AGTKGKRYALPHARI+MHQP G Sbjct 71 GSVTAGMAIFDTMQYAPCDIATYGMGLAASMGQFLLSAGTKGKRYALPHARIMMHQPSAG 130 Query 129 VTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFVDH 188 V G+AADIAIQAEQFA K+EM L A FTGQ +E+I DSDRDRWFTA +A EYGFVDH Sbjct 131 VGGTAADIAIQAEQFAHTKREMAELIAGFTGQTVEQITKDSDRDRWFTAEQAKEYGFVDH 190 Query 189 IITRA 193 +I+ A Sbjct 191 VISSA 195 >gi|333918759|ref|YP_004492340.1| ATP-dependent Clp protease proteolytic subunit [Amycolicicoccus subflavus DQS3-9A1] gi|333480980|gb|AEF39540.1| ATP-dependent Clp protease proteolytic subunit [Amycolicicoccus subflavus DQS3-9A1] Length=206 Score = 296 bits (758), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 139/196 (71%), Positives = 169/196 (87%), Gaps = 0/196 (0%) Query 2 SQVTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDIS 61 +Q +MR+ S G++L+DSV+ERLL ERIIFLGS+V+DEIAN+LCAQILLL+AED ++DIS Sbjct 7 AQNPEMRTTSYGMNLSDSVFERLLQERIIFLGSQVDDEIANKLCAQILLLSAEDPTRDIS 66 Query 62 LYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARIL 121 LYINSPGGS+++GMAI+DTM A CDIATYAMG+AASMG+FLL+AGT GKR+ALPHARI+ Sbjct 67 LYINSPGGSVTSGMAIFDTMQYAECDIATYAMGLAASMGQFLLSAGTPGKRFALPHARIM 126 Query 122 MHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEAL 181 MHQP G+ G+AADIAIQAEQFA K+EM L AE TGQ +E+I DSDRDRWFTA A Sbjct 127 MHQPSAGIGGTAADIAIQAEQFAYTKREMAELIAEHTGQSVEQIIEDSDRDRWFTATAAK 186 Query 182 EYGFVDHIITRAHVNG 197 EYGFVDH+I+RA +G Sbjct 187 EYGFVDHVISRAAQSG 202 >gi|227504047|ref|ZP_03934096.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium striatum ATCC 6940] gi|227199377|gb|EEI79425.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium striatum ATCC 6940] Length=199 Score = 296 bits (758), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 141/197 (72%), Positives = 166/197 (85%), Gaps = 2/197 (1%) Query 1 VSQVTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDI 60 +S+ M S++ G+SL DSVYERLL ERIIFLG++V+DEIAN+LCAQILLL+AED ++DI Sbjct 1 MSEKISMNSSATGMSLGDSVYERLLRERIIFLGTQVDDEIANKLCAQILLLSAEDPTRDI 60 Query 61 SLYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARI 120 SLYINSPGGS++AGMAIYDTM +PCDIATY MG+AASMG+FLL+ GTKGKRYALPHARI Sbjct 61 SLYINSPGGSVTAGMAIYDTMKYSPCDIATYGMGLAASMGQFLLSGGTKGKRYALPHARI 120 Query 121 LMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEA 180 +MHQP GV G+AADIAIQAEQFA K+EM +L AE TGQ E+I DSDRDRWFTA +A Sbjct 121 MMHQPSAGVGGTAADIAIQAEQFAQTKREMAQLIAEHTGQSFEQITKDSDRDRWFTAQQA 180 Query 181 LEYGFVDHIITRAHVNG 197 EYG VDH+I VNG Sbjct 181 KEYGIVDHVIES--VNG 195 >gi|226307302|ref|YP_002767262.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodococcus erythropolis PR4] gi|229493230|ref|ZP_04387022.1| Clp protease [Rhodococcus erythropolis SK121] gi|226186419|dbj|BAH34523.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodococcus erythropolis PR4] gi|229319961|gb|EEN85790.1| Clp protease [Rhodococcus erythropolis SK121] Length=208 Score = 296 bits (758), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 138/195 (71%), Positives = 167/195 (86%), Gaps = 0/195 (0%) Query 3 QVTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISL 62 Q M S + GL+L+DSVYERLL ERIIFLG++V+D+IAN+LCAQILLL+AED ++DISL Sbjct 10 QSPAMTSATAGLNLSDSVYERLLRERIIFLGTQVDDDIANKLCAQILLLSAEDPTRDISL 69 Query 63 YINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILM 122 YINSPGGS++AGMAI+DTM A CDIAT+ MG+AASMG+FLL+AGTKGKRYALPHARI+M Sbjct 70 YINSPGGSVTAGMAIFDTMQFAECDIATFGMGLAASMGQFLLSAGTKGKRYALPHARIMM 129 Query 123 HQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALE 182 HQP G+ GSA+DIAI AEQF K+EM L A+ TGQ +E+I ADSDRDRWFTA EALE Sbjct 130 HQPSAGIGGSASDIAIMAEQFKHTKREMAELIAQHTGQTVEQITADSDRDRWFTAKEALE 189 Query 183 YGFVDHIITRAHVNG 197 YGFVDH+++RA+ G Sbjct 190 YGFVDHVVSRANQAG 204 >gi|226360502|ref|YP_002778280.1| ATP-dependent Clp protease proteolytic subunit [Rhodococcus opacus B4] gi|226238987|dbj|BAH49335.1| ATP-dependent Clp protease proteolytic subunit [Rhodococcus opacus B4] Length=208 Score = 295 bits (756), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 137/191 (72%), Positives = 165/191 (87%), Gaps = 0/191 (0%) Query 3 QVTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISL 62 Q M S + GL+L+DSVYERLL ERIIFLG++V+D+IAN+LCAQILLL+AED S+DISL Sbjct 10 QSPAMTSATAGLNLSDSVYERLLRERIIFLGTQVDDDIANKLCAQILLLSAEDPSRDISL 69 Query 63 YINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILM 122 YINSPGGS+SAGMAI+DTM A CD+AT+ MG+AASMG+FLL+AG KGKRYALPHARI+M Sbjct 70 YINSPGGSVSAGMAIFDTMQFAECDVATFGMGLAASMGQFLLSAGAKGKRYALPHARIMM 129 Query 123 HQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALE 182 HQP G+ G+A+DIAI AEQFA K+EM L AE TGQ +E+I ADSDRDRWFTA +ALE Sbjct 130 HQPSAGIGGTASDIAIMAEQFAHTKREMAELIAEHTGQTVEQITADSDRDRWFTAQQALE 189 Query 183 YGFVDHIITRA 193 YGFVDH+++RA Sbjct 190 YGFVDHVVSRA 200 >gi|300859022|ref|YP_003784005.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium pseudotuberculosis FRC41] gi|300686476|gb|ADK29398.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium pseudotuberculosis FRC41] gi|302206721|gb|ADL11063.1| ATP-dependent Clp protease proteolytic subunit 2 [Corynebacterium pseudotuberculosis C231] gi|302331275|gb|ADL21469.1| ATP-dependent Clp protease proteolytic subunit 2 [Corynebacterium pseudotuberculosis 1002] gi|308276964|gb|ADO26863.1| ATP-dependent Clp protease proteolytic subunit 2 [Corynebacterium pseudotuberculosis I19] gi|341825407|gb|AEK92928.1| ATP-dependent Clp protease proteolytic subunit 2 [Corynebacterium pseudotuberculosis PAT10] Length=199 Score = 295 bits (755), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 139/188 (74%), Positives = 160/188 (86%), Gaps = 0/188 (0%) Query 7 MRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINS 66 M S GL+L+DSVYERLL ERIIFLG++V+DEIAN+LCAQILLL+AED ++DISLYINS Sbjct 7 MAQGSTGLNLSDSVYERLLRERIIFLGTQVDDEIANKLCAQILLLSAEDPNRDISLYINS 66 Query 67 PGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPL 126 PGGS++AGMAIYDTM +PCDIATY MG+AASMG+FLL+ GTKGKRYALPHARI+MHQP Sbjct 67 PGGSVTAGMAIYDTMKYSPCDIATYGMGLAASMGQFLLSGGTKGKRYALPHARIMMHQPS 126 Query 127 GGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFV 186 GV G+AADIAIQAEQFA K+EM L AE TGQ E+I DSDRDRWFTAA+A EYG V Sbjct 127 AGVGGTAADIAIQAEQFAQTKREMAELIAEHTGQTFEQITKDSDRDRWFTAAQAKEYGIV 186 Query 187 DHIITRAH 194 DH+I A Sbjct 187 DHVIASAQ 194 >gi|111018382|ref|YP_701354.1| ATP-dependent Clp protease proteolytic subunit [Rhodococcus jostii RHA1] gi|116243119|sp|Q0SGZ0.1|CLPP2_RHOSR RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|110817912|gb|ABG93196.1| ATP-dependent protease proteolytic subunit [Rhodococcus jostii RHA1] Length=195 Score = 295 bits (754), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 136/187 (73%), Positives = 164/187 (88%), Gaps = 0/187 (0%) Query 7 MRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINS 66 M S + GL+L+DSVYERLL ERIIFLG++V+D+IAN+LCAQILLL+AED S+DISLYINS Sbjct 1 MTSATAGLNLSDSVYERLLRERIIFLGTQVDDDIANKLCAQILLLSAEDPSRDISLYINS 60 Query 67 PGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPL 126 PGGS+SAGMAI+DTM A CD+AT+ MG+AASMG+FLL+AG KGKRYALPHARI+MHQP Sbjct 61 PGGSVSAGMAIFDTMQFAECDVATFGMGLAASMGQFLLSAGAKGKRYALPHARIMMHQPS 120 Query 127 GGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFV 186 G+ G+A+DIAI AEQFA K+EM L AE TGQ +E+I ADSDRDRWFTA +ALEYGFV Sbjct 121 AGIGGTASDIAIMAEQFAHTKREMAELIAEHTGQTVEQITADSDRDRWFTAQQALEYGFV 180 Query 187 DHIITRA 193 DH+++RA Sbjct 181 DHVVSRA 187 >gi|319947981|ref|ZP_08022158.1| ATP-dependent Clp protease proteolytic subunit [Dietzia cinnamea P4] gi|319438327|gb|EFV93270.1| ATP-dependent Clp protease proteolytic subunit [Dietzia cinnamea P4] Length=213 Score = 294 bits (753), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 138/188 (74%), Positives = 160/188 (86%), Gaps = 0/188 (0%) Query 10 NSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINSPGG 69 S GL+L DSVYERLL ERIIFLGS+V+D+IANRLCAQ+LLLAAED S+DI++YINSPGG Sbjct 21 GSHGLTLGDSVYERLLQERIIFLGSQVDDDIANRLCAQMLLLAAEDPSRDIAMYINSPGG 80 Query 70 SISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGV 129 S++AGMAIYDTM CD+ATY MG+AASMG+FLLAAGTKGKRYALPHA+I+MHQP GV Sbjct 81 SVTAGMAIYDTMQFVECDVATYGMGLAASMGQFLLAAGTKGKRYALPHAKIMMHQPSAGV 140 Query 130 TGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFVDHI 189 GSAADIAIQAEQFA K+EM L A TGQ E++ DSDRDRWFTA +A EYGFVDH+ Sbjct 141 GGSAADIAIQAEQFAATKREMAELIAFHTGQSFEQVTEDSDRDRWFTAEQAKEYGFVDHV 200 Query 190 ITRAHVNG 197 I+RA +G Sbjct 201 ISRASQSG 208 >gi|337291366|ref|YP_004630387.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium ulcerans BR-AD22] gi|334697415|gb|AEG82212.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium ulcerans 809] gi|334699672|gb|AEG84468.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium ulcerans BR-AD22] Length=199 Score = 294 bits (753), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 139/188 (74%), Positives = 159/188 (85%), Gaps = 0/188 (0%) Query 7 MRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINS 66 M S GL+L+DSVYERLL ERIIFLG++V+DEIAN+LCAQILLL+AED +DISLYINS Sbjct 7 MAQGSAGLNLSDSVYERLLRERIIFLGTQVDDEIANKLCAQILLLSAEDPHRDISLYINS 66 Query 67 PGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPL 126 PGGS++AGMAIYDTM +PCDIATY MG+AASMG+FLL+ GTKGKRYALPHARI+MHQP Sbjct 67 PGGSVTAGMAIYDTMKYSPCDIATYGMGLAASMGQFLLSGGTKGKRYALPHARIMMHQPS 126 Query 127 GGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFV 186 GV G+AADIAIQAEQFA K+EM L AE TGQ E+I DSDRDRWFTAA+A EYG V Sbjct 127 AGVGGTAADIAIQAEQFAQTKREMAELIAEHTGQTFEQITKDSDRDRWFTAAQAKEYGIV 186 Query 187 DHIITRAH 194 DH+I A Sbjct 187 DHVIASAQ 194 >gi|305681092|ref|ZP_07403899.1| endopeptidase Clp [Corynebacterium matruchotii ATCC 14266] gi|305659297|gb|EFM48797.1| endopeptidase Clp [Corynebacterium matruchotii ATCC 14266] Length=191 Score = 293 bits (750), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 136/185 (74%), Positives = 160/185 (87%), Gaps = 0/185 (0%) Query 10 NSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINSPGG 69 ++ G +L+DSVYERLL +RIIFLG++V+DEIAN+LCAQILLL+AED ++DISLYINSPGG Sbjct 2 STPGFNLSDSVYERLLRDRIIFLGTQVDDEIANKLCAQILLLSAEDPTRDISLYINSPGG 61 Query 70 SISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGV 129 S++AGMAIYDTM +PCDIATYAMG+AASMG+FLL GTKGKRYALPHARI+MHQP GV Sbjct 62 SVTAGMAIYDTMTYSPCDIATYAMGLAASMGQFLLTGGTKGKRYALPHARIMMHQPSAGV 121 Query 130 TGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFVDHI 189 G+AADIAIQAEQFA K+EM L AE +GQ E+I DSDRDRWFTA +ALEYG VDH+ Sbjct 122 GGTAADIAIQAEQFAQTKREMAELIAEHSGQTFEQITKDSDRDRWFTAQQALEYGLVDHV 181 Query 190 ITRAH 194 IT A Sbjct 182 ITAAQ 186 >gi|255325480|ref|ZP_05366582.1| Clp protease [Corynebacterium tuberculostearicum SK141] gi|311741272|ref|ZP_07715096.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium pseudogenitalium ATCC 33035] gi|255297418|gb|EET76733.1| Clp protease [Corynebacterium tuberculostearicum SK141] gi|311303442|gb|EFQ79521.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium pseudogenitalium ATCC 33035] Length=199 Score = 293 bits (750), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 139/197 (71%), Positives = 165/197 (84%), Gaps = 2/197 (1%) Query 1 VSQVTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDI 60 +S+ M S+S G++L+DSVYERLL ERIIFLG++V+DEIAN+LCAQILLL+AED ++DI Sbjct 1 MSEKISMNSSSTGMNLSDSVYERLLRERIIFLGTQVDDEIANKLCAQILLLSAEDPTRDI 60 Query 61 SLYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARI 120 SLYINSPGGS++AGMAIYDTM +PCDIATY MG+AASMG+FLL+ GTKGKRYALPHARI Sbjct 61 SLYINSPGGSVTAGMAIYDTMKYSPCDIATYGMGLAASMGQFLLSGGTKGKRYALPHARI 120 Query 121 LMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEA 180 +MHQP GV G+AADIAIQAEQFA K+EM L AE TGQ E+I DSDRDRW TA +A Sbjct 121 MMHQPSAGVGGTAADIAIQAEQFAQTKREMAELIAEHTGQTFEQITKDSDRDRWMTAQQA 180 Query 181 LEYGFVDHIITRAHVNG 197 +YG VDH+I VNG Sbjct 181 KDYGIVDHVI--ESVNG 195 >gi|225021668|ref|ZP_03710860.1| hypothetical protein CORMATOL_01696 [Corynebacterium matruchotii ATCC 33806] gi|224945659|gb|EEG26868.1| hypothetical protein CORMATOL_01696 [Corynebacterium matruchotii ATCC 33806] Length=191 Score = 293 bits (750), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 135/185 (73%), Positives = 160/185 (87%), Gaps = 0/185 (0%) Query 10 NSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINSPGG 69 ++ G +L+DSVYERLL +RIIFLG++V+DEIAN+LCAQILLL+AED ++DISLYINSPGG Sbjct 2 STPGFNLSDSVYERLLRDRIIFLGTQVDDEIANKLCAQILLLSAEDPTRDISLYINSPGG 61 Query 70 SISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGV 129 S++AGMAIYDTM +PCDIATYAMG+AASMG+FLL GTKGKRYALPHARI+MHQP GV Sbjct 62 SVTAGMAIYDTMTYSPCDIATYAMGLAASMGQFLLTGGTKGKRYALPHARIMMHQPSAGV 121 Query 130 TGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFVDHI 189 G+AADIAIQAEQFA K+EM L AE +GQ E+I DSDRDRWFTA +ALEYG VDH+ Sbjct 122 GGTAADIAIQAEQFAQTKREMAELIAEHSGQTFEQITKDSDRDRWFTAQQALEYGLVDHV 181 Query 190 ITRAH 194 +T A Sbjct 182 VTAAQ 186 >gi|227542940|ref|ZP_03972989.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium glucuronolyticum ATCC 51866] gi|227181162|gb|EEI62134.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium glucuronolyticum ATCC 51866] Length=187 Score = 293 bits (749), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 137/180 (77%), Positives = 157/180 (88%), Gaps = 0/180 (0%) Query 14 LSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINSPGGSISA 73 ++L DSVYERLL ERIIFLGSEVNDEIAN+LCAQILLL+AED ++DISLYINSPGGS++A Sbjct 1 MNLGDSVYERLLRERIIFLGSEVNDEIANKLCAQILLLSAEDPTRDISLYINSPGGSVTA 60 Query 74 GMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSA 133 GMAIYDTM APCD+ATYAMG+AASMG+FLL AGTKGKRYALPHARILMHQP GV G+A Sbjct 61 GMAIYDTMKYAPCDVATYAMGLAASMGQFLLTAGTKGKRYALPHARILMHQPSAGVGGTA 120 Query 134 ADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFVDHIITRA 193 +DIAIQA+QFA+ KKEM L AE +GQ E+I DSDRDRWFTA EA +YG DH+I+ A Sbjct 121 SDIAIQAQQFALTKKEMAELIAEHSGQTFEQISKDSDRDRWFTAEEARDYGLCDHVISHA 180 >gi|227488326|ref|ZP_03918642.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium glucuronolyticum ATCC 51867] gi|227091736|gb|EEI27048.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium glucuronolyticum ATCC 51867] Length=187 Score = 292 bits (748), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 137/180 (77%), Positives = 157/180 (88%), Gaps = 0/180 (0%) Query 14 LSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINSPGGSISA 73 ++L DSVYERLL ERIIFLGSEVNDEIAN+LCAQILLL+AED ++DISLYINSPGGS++A Sbjct 1 MNLGDSVYERLLRERIIFLGSEVNDEIANKLCAQILLLSAEDPTRDISLYINSPGGSVTA 60 Query 74 GMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSA 133 GMAIYDTM APCD+ATYAMG+AASMG+FLL AGTKGKRYALPHARILMHQP GV G+A Sbjct 61 GMAIYDTMKYAPCDVATYAMGLAASMGQFLLTAGTKGKRYALPHARILMHQPSAGVGGTA 120 Query 134 ADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFVDHIITRA 193 +DIAIQA+QFA+ KKEM L AE +GQ E+I DSDRDRWFTA EA +YG DH+I+ A Sbjct 121 SDIAIQAQQFALTKKEMDELIAEHSGQTFEQISKDSDRDRWFTAEEARDYGLCDHVISHA 180 >gi|300780629|ref|ZP_07090484.1| endopeptidase Clp [Corynebacterium genitalium ATCC 33030] gi|300533615|gb|EFK54675.1| endopeptidase Clp [Corynebacterium genitalium ATCC 33030] Length=193 Score = 290 bits (743), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 136/188 (73%), Positives = 159/188 (85%), Gaps = 0/188 (0%) Query 7 MRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINS 66 M + + G++L DSVYERLL ERIIFLG +V+DEIAN+LCAQILLL+AED ++DISLYINS Sbjct 1 MTTPATGMNLGDSVYERLLRERIIFLGQQVDDEIANKLCAQILLLSAEDPNRDISLYINS 60 Query 67 PGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPL 126 PGGS++AGMAIYDTM +PCDIATY MG+AASMG+FLL+ GTKGKR+ALPHARI+MHQP Sbjct 61 PGGSVTAGMAIYDTMKYSPCDIATYGMGLAASMGQFLLSGGTKGKRFALPHARIMMHQPS 120 Query 127 GGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFV 186 GV G+AADIAIQAEQFA KKEM L AE TGQ E+I DSDRDRWFTA EA +YG V Sbjct 121 AGVGGTAADIAIQAEQFAQTKKEMAELIAEHTGQSFEQITKDSDRDRWFTAQEAKDYGIV 180 Query 187 DHIITRAH 194 DH+I+ A Sbjct 181 DHVISNAQ 188 Lambda K H 0.319 0.133 0.373 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 218250040016 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40