BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 21,062,489 sequences; 7,218,481,314 total letters Query= Rv2468A Rv2468A Conserved protein 2772098:2772331 reverse MW:8239 Length=77 Score E Sequences producing significant alignments: (Bits) Value gi|15841993|ref|NP_337030.1| hypothetical protein MT2544 [Mycoba... 153 9e-36 gi|167969793|ref|ZP_02552070.1| hypothetical protein MtubH3_1792... 153 1e-35 gi|183983793|ref|YP_001852084.1| hypothetical protein MMAR_3819 ... 115 4e-24 gi|118619001|ref|YP_907333.1| hypothetical protein MUL_3744 [Myc... 114 5e-24 gi|383825363|ref|ZP_09980513.1| hypothetical protein MXEN_10946 ... 109 2e-22 gi|408782249|ref|ZP_11194022.1| hypothetical protein MkanA1_1631... 102 2e-20 gi|400536403|ref|ZP_10799938.1| hypothetical protein MCOL_V21849... 101 7e-20 gi|333990078|ref|YP_004522692.1| hypothetical protein JDM601_143... 100 1e-19 gi|254821436|ref|ZP_05226437.1| hypothetical protein MintA_15976... 98.6 4e-19 gi|118463696|ref|YP_880932.1| hypothetical protein MAV_1703 [Myc... 87.0 1e-15 gi|41408387|ref|NP_961223.1| hypothetical protein MAP2289c [Myco... 87.0 1e-15 gi|336458277|gb|EGO37257.1| hypothetical protein MAPs_14690 [Myc... 83.6 1e-14 gi|296170463|ref|ZP_06852051.1| conserved hypothetical protein [... 83.2 1e-14 gi|120405016|ref|YP_954845.1| hypothetical protein Mvan_4062 [My... 70.5 1e-10 gi|357021840|ref|ZP_09084071.1| hypothetical protein KEK_17538 [... 69.7 2e-10 gi|145223161|ref|YP_001133839.1| hypothetical protein Mflv_2574 ... 68.9 3e-10 gi|315443618|ref|YP_004076497.1| hypothetical protein Mspyr1_200... 67.8 8e-10 gi|118470221|ref|YP_888954.1| hypothetical protein MSMEG_4693 [M... 67.4 1e-09 gi|353188443|gb|EHB53964.1| hypothetical protein MycrhDRAFT_4427... 66.2 2e-09 gi|108800574|ref|YP_640771.1| hypothetical protein Mmcs_3608 [My... 65.5 4e-09 gi|392417305|ref|YP_006453910.1| hypothetical protein Mycch_3494... 65.5 4e-09 gi|404446466|ref|ZP_11011577.1| hypothetical protein MVAC_24421 ... 63.5 1e-08 gi|404419187|ref|ZP_11000948.1| hypothetical protein MFORT_02303... 62.4 3e-08 gi|312140372|ref|YP_004007708.1| membrane protein [Rhodococcus e... 60.1 1e-07 gi|296139118|ref|YP_003646361.1| hypothetical protein [Tsukamure... 60.1 2e-07 gi|374607581|ref|ZP_09680382.1| hypothetical protein MyctuDRAFT_... 59.7 2e-07 gi|392123209|gb|EIU48971.1| hypothetical protein MA6G0125S_1614 ... 59.7 2e-07 gi|382945697|gb|EIC69989.1| hypothetical protein S7W_06662 [Myco... 59.3 3e-07 gi|169628658|ref|YP_001702307.1| hypothetical protein MAB_1568 [... 59.3 3e-07 gi|375141188|ref|YP_005001837.1| hypothetical protein [Mycobacte... 58.2 5e-07 gi|407984443|ref|ZP_11165061.1| hypothetical protein C731_3033 [... 57.8 7e-07 gi|363420174|ref|ZP_09308268.1| membrane protein [Rhodococcus py... 54.7 6e-06 gi|383308248|ref|YP_005361059.1| hypothetical protein MRGA327_15... 54.7 6e-06 gi|382939080|gb|EIC63409.1| hypothetical protein OUW_19536 [Myco... 54.3 7e-06 gi|54023283|ref|YP_117525.1| hypothetical protein nfa13160 [Noca... 54.3 8e-06 gi|384565192|ref|ZP_10012296.1| hypothetical protein SacglDRAFT_... 52.0 4e-05 gi|354613364|ref|ZP_09031287.1| hypothetical protein SacpaDRAFT_... 52.0 4e-05 gi|226360515|ref|YP_002778293.1| hypothetical protein ROP_11010 ... 52.0 4e-05 gi|407279584|ref|ZP_11108054.1| membrane protein [Rhodococcus sp... 52.0 5e-05 gi|226307311|ref|YP_002767271.1| hypothetical protein RER_38240 ... 51.2 6e-05 gi|379707559|ref|YP_005262764.1| hypothetical protein NOCYR_1326... 51.2 8e-05 gi|378586939|ref|ZP_09835494.1| hypothetical protein SazuN_19623... 49.3 2e-04 gi|407642909|ref|YP_006806668.1| hypothetical protein O3I_008655... 48.9 3e-04 gi|257055234|ref|YP_003133066.1| hypothetical protein Svir_11850... 48.1 6e-04 gi|384101112|ref|ZP_10002165.1| hypothetical protein W59_07090 [... 48.1 6e-04 gi|378816074|ref|ZP_09839006.1| hypothetical protein O3I_15214 [... 47.8 7e-04 gi|383828284|ref|ZP_09983373.1| hypothetical protein SacxiDRAFT_... 47.8 8e-04 gi|375099709|ref|ZP_09745972.1| hypothetical protein SaccyDRAFT_... 47.0 0.001 gi|388823724|gb|EIM46289.1| hypothetical protein WSS_17475 [Rhod... 46.6 0.002 gi|111018394|ref|YP_701366.1| hypothetical protein RHA1_ro01386 ... 46.2 0.002 >gi|15841993|ref|NP_337030.1| hypothetical protein MT2544 [Mycobacterium tuberculosis CDC1551] gi|308232140|ref|ZP_07415076.2| hypothetical protein TMAG_03027 [Mycobacterium tuberculosis SUMu001] gi|308371023|ref|ZP_07667070.1| hypothetical protein TMCG_00567 [Mycobacterium tuberculosis SUMu003] 15 more sequence titles Length=80 Score = 153 bits (387), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 77/77 (100%), Positives = 77/77 (100%), Gaps = 0/77 (0%) Query 1 MEIHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGH 60 MEIHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGH Sbjct 4 MEIHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGH 63 Query 61 GHDASEFTVGGGASGTW 77 GHDASEFTVGGGASGTW Sbjct 64 GHDASEFTVGGGASGTW 80 >gi|167969793|ref|ZP_02552070.1| hypothetical protein MtubH3_17920 [Mycobacterium tuberculosis H37Ra] gi|254232603|ref|ZP_04925930.1| hypothetical protein TBCG_02410 [Mycobacterium tuberculosis C] gi|254551517|ref|ZP_05141964.1| hypothetical protein Mtube_13824 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] 18 more sequence titles Length=77 Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 77/77 (100%), Positives = 77/77 (100%), Gaps = 0/77 (0%) Query 1 MEIHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGH 60 MEIHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGH Sbjct 1 MEIHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGH 60 Query 61 GHDASEFTVGGGASGTW 77 GHDASEFTVGGGASGTW Sbjct 61 GHDASEFTVGGGASGTW 77 >gi|183983793|ref|YP_001852084.1| hypothetical protein MMAR_3819 [Mycobacterium marinum M] gi|183177119|gb|ACC42229.1| conserved hypothetical protein [Mycobacterium marinum M] Length=80 Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 61/77 (80%), Positives = 66/77 (86%), Gaps = 0/77 (0%) Query 1 MEIHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGH 60 MEIHLFFVGIPL LVVVL + +RKGPHPATY+LSE WTHPPILWAATDE VG AHG Sbjct 4 MEIHLFFVGIPLFLVVVLGAIFLTRKGPHPATYELSEKWTHPPILWAATDEAVGDAHGHG 63 Query 61 GHDASEFTVGGGASGTW 77 GH +SEF+VGGGASGTW Sbjct 64 GHGSSEFSVGGGASGTW 80 >gi|118619001|ref|YP_907333.1| hypothetical protein MUL_3744 [Mycobacterium ulcerans Agy99] gi|118571111|gb|ABL05862.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=77 Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 61/77 (80%), Positives = 66/77 (86%), Gaps = 0/77 (0%) Query 1 MEIHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGH 60 MEIHLFFVGIPL LVVVL + +RKGPHPATY+LSE WTHPPILWAATDE VG AHG Sbjct 1 MEIHLFFVGIPLFLVVVLGAIFLTRKGPHPATYELSEKWTHPPILWAATDEAVGDAHGHG 60 Query 61 GHDASEFTVGGGASGTW 77 GH +SEF+VGGGASGTW Sbjct 61 GHGSSEFSVGGGASGTW 77 >gi|383825363|ref|ZP_09980513.1| hypothetical protein MXEN_10946 [Mycobacterium xenopi RIVM700367] gi|383335093|gb|EID13525.1| hypothetical protein MXEN_10946 [Mycobacterium xenopi RIVM700367] Length=77 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 63/77 (82%), Positives = 68/77 (89%), Gaps = 3/77 (3%) Query 1 MEIHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGH 60 MEIHL+FVGIPLLLVVVL+ LIWSR+GPHPATYKLSEPWTHPPILWAATDE VG H Sbjct 4 MEIHLYFVGIPLLLVVVLAALIWSRRGPHPATYKLSEPWTHPPILWAATDEDVGDH---H 60 Query 61 GHDASEFTVGGGASGTW 77 GH SEF+VGGGASG+W Sbjct 61 GHGNSEFSVGGGASGSW 77 >gi|408782249|ref|ZP_11194022.1| hypothetical protein MkanA1_16314 [Mycobacterium kansasii ATCC 12478] Length=75 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 58/77 (76%), Positives = 68/77 (89%), Gaps = 2/77 (2%) Query 1 MEIHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGH 60 MEIHL FVGIPL LVVVL+++I++RKGPHPATY++SE WTHPPILWAATDE VG +H Sbjct 1 MEIHLLFVGIPLSLVVVLALMIFTRKGPHPATYEMSERWTHPPILWAATDEDVGGSH--G 58 Query 61 GHDASEFTVGGGASGTW 77 GH +SEF+VGGGASGTW Sbjct 59 GHGSSEFSVGGGASGTW 75 >gi|400536403|ref|ZP_10799938.1| hypothetical protein MCOL_V218493 [Mycobacterium colombiense CECT 3035] gi|400330485|gb|EJO87983.1| hypothetical protein MCOL_V218493 [Mycobacterium colombiense CECT 3035] Length=75 Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 62/77 (81%), Positives = 64/77 (84%), Gaps = 2/77 (2%) Query 1 MEIHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGH 60 M +HLF VGIPLLLV VLSVLIWS KGPHPA YKL E WTHPPILWAAT E VG AHGGH Sbjct 1 MHVHLFIVGIPLLLVAVLSVLIWSHKGPHPAAYKLGEKWTHPPILWAATGEEVGHAHGGH 60 Query 61 GHDASEFTVGGGASGTW 77 G SEF+VGGGASGTW Sbjct 61 G--TSEFSVGGGASGTW 75 >gi|333990078|ref|YP_004522692.1| hypothetical protein JDM601_1438 [Mycobacterium sp. JDM601] gi|333486046|gb|AEF35438.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=77 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 47/72 (66%), Positives = 57/72 (80%), Gaps = 3/72 (4%) Query 6 FFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGHGHDAS 65 +FVGIP++LV +LS IWS+KGP A Y++++ WTHPPILWAATDE VG GHGH S Sbjct 9 YFVGIPIVLVALLSARIWSQKGPRAAVYQMADRWTHPPILWAATDEAVGR---GHGHGKS 65 Query 66 EFTVGGGASGTW 77 EF+VGGGASG W Sbjct 66 EFSVGGGASGNW 77 >gi|254821436|ref|ZP_05226437.1| hypothetical protein MintA_15976 [Mycobacterium intracellulare ATCC 13950] gi|379746502|ref|YP_005337323.1| hypothetical protein OCU_17830 [Mycobacterium intracellulare ATCC 13950] gi|379753780|ref|YP_005342452.1| hypothetical protein OCO_17680 [Mycobacterium intracellulare MOTT-02] 8 more sequence titles Length=75 Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 59/77 (77%), Positives = 64/77 (84%), Gaps = 2/77 (2%) Query 1 MEIHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGH 60 M +HL VGIP+LLVV LSVLIWSRKGPHPA+YKL E WTHPPILWAA E VG +HGGH Sbjct 1 MHLHLIIVGIPVLLVVALSVLIWSRKGPHPASYKLGEKWTHPPILWAAIGEEVGHSHGGH 60 Query 61 GHDASEFTVGGGASGTW 77 G SEF+VGGGASGTW Sbjct 61 G--TSEFSVGGGASGTW 75 >gi|118463696|ref|YP_880932.1| hypothetical protein MAV_1703 [Mycobacterium avium 104] gi|254774521|ref|ZP_05216037.1| hypothetical protein MaviaA2_07598 [Mycobacterium avium subsp. avium ATCC 25291] gi|118164983|gb|ABK65880.1| conserved hypothetical protein [Mycobacterium avium 104] Length=76 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 62/77 (81%), Positives = 65/77 (85%), Gaps = 1/77 (1%) Query 1 MEIHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGH 60 M++HLF VGIPLLLV+VLSVLIWS KGPHPATYKL E WTHPPILWAA DE VG A G Sbjct 1 MQMHLFIVGIPLLLVIVLSVLIWSHKGPHPATYKLGEKWTHPPILWAAVDEDVGHA-GHG 59 Query 61 GHDASEFTVGGGASGTW 77 GH SEFTVGGGASGTW Sbjct 60 GHGTSEFTVGGGASGTW 76 >gi|41408387|ref|NP_961223.1| hypothetical protein MAP2289c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396743|gb|AAS04606.1| hypothetical protein MAP_2289c [Mycobacterium avium subsp. paratuberculosis K-10] Length=79 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 62/77 (81%), Positives = 65/77 (85%), Gaps = 1/77 (1%) Query 1 MEIHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGH 60 M++HLF VGIPLLLV+VLSVLIWS KGPHPATYKL E WTHPPILWAA DE VG A G Sbjct 4 MQMHLFIVGIPLLLVIVLSVLIWSHKGPHPATYKLGEKWTHPPILWAAVDEDVGHA-GHG 62 Query 61 GHDASEFTVGGGASGTW 77 GH SEFTVGGGASGTW Sbjct 63 GHGTSEFTVGGGASGTW 79 >gi|336458277|gb|EGO37257.1| hypothetical protein MAPs_14690 [Mycobacterium avium subsp. paratuberculosis S397] Length=74 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 61/75 (82%), Positives = 63/75 (84%), Gaps = 1/75 (1%) Query 3 IHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGHGH 62 +HLF VGIPLLLV+VLSVLIWS KGPHPATYKL E WTHPPILWAA DE VG A G GH Sbjct 1 MHLFIVGIPLLLVIVLSVLIWSHKGPHPATYKLGEKWTHPPILWAAVDEDVGHA-GHGGH 59 Query 63 DASEFTVGGGASGTW 77 SEFTVGGGASGTW Sbjct 60 GTSEFTVGGGASGTW 74 >gi|296170463|ref|ZP_06852051.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894934|gb|EFG74655.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=93 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 59/77 (77%), Positives = 66/77 (86%), Gaps = 2/77 (2%) Query 1 MEIHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGH 60 ++IHL+ +GIPLLLVVVL+VLIWS KGPHPATYKL + WTHPPILWAATDE VG HGGH Sbjct 19 LQIHLYLIGIPLLLVVVLAVLIWSHKGPHPATYKLPDKWTHPPILWAATDEDVGHEHGGH 78 Query 61 GHDASEFTVGGGASGTW 77 G EF+VGGGASGTW Sbjct 79 G--GHEFSVGGGASGTW 93 >gi|120405016|ref|YP_954845.1| hypothetical protein Mvan_4062 [Mycobacterium vanbaalenii PYR-1] gi|119957834|gb|ABM14839.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=77 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/75 (55%), Positives = 51/75 (68%), Gaps = 4/75 (5%) Query 3 IHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGHGH 62 +H FV IPL L +LS+ I+++KGPHPAT+ +SE WTH PILWAA + A GHG Sbjct 7 VHASFVVIPLALAGLLSLFIFTKKGPHPATFDMSEKWTHEPILWAADEP----ADHGHGG 62 Query 63 DASEFTVGGGASGTW 77 S T+GGGASG W Sbjct 63 HGSHLTIGGGASGKW 77 >gi|357021840|ref|ZP_09084071.1| hypothetical protein KEK_17538 [Mycobacterium thermoresistibile ATCC 19527] gi|356479588|gb|EHI12725.1| hypothetical protein KEK_17538 [Mycobacterium thermoresistibile ATCC 19527] Length=77 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/76 (60%), Positives = 54/76 (72%), Gaps = 3/76 (3%) Query 2 EIHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGHG 61 E L+ V IP LLV+VL+ LI+ KG PA+Y+LSEPWTH PILW A+DE AHGGHG Sbjct 5 EYALYLVVIPGLLVLVLAALIYRPKGRRPASYQLSEPWTHDPILW-ASDEPAAPAHGGHG 63 Query 62 HDASEFTVGGGASGTW 77 + T+GGGASG W Sbjct 64 DEP--VTIGGGASGKW 77 >gi|145223161|ref|YP_001133839.1| hypothetical protein Mflv_2574 [Mycobacterium gilvum PYR-GCK] gi|145215647|gb|ABP45051.1| hypothetical protein Mflv_2574 [Mycobacterium gilvum PYR-GCK] Length=91 Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 39/75 (52%), Positives = 51/75 (68%), Gaps = 4/75 (5%) Query 3 IHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGHGH 62 +H F+ +PL L +LS+ I+++KGPHPAT+ +SE WTH PILWAA + A GHG Sbjct 21 VHASFLLVPLALAGLLSLFIFTKKGPHPATFDMSEKWTHEPILWAADE----PADHGHGG 76 Query 63 DASEFTVGGGASGTW 77 S T+GGGASG W Sbjct 77 HGSHLTIGGGASGKW 91 >gi|315443618|ref|YP_004076497.1| hypothetical protein Mspyr1_20040 [Mycobacterium gilvum Spyr1] gi|315261921|gb|ADT98662.1| hypothetical protein Mspyr1_20040 [Mycobacterium gilvum Spyr1] Length=71 Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 39/75 (52%), Positives = 51/75 (68%), Gaps = 4/75 (5%) Query 3 IHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGHGH 62 +H F+ +PL L +LS+ I+++KGPHPAT+ +SE WTH PILWAA + A GHG Sbjct 1 MHASFLLVPLALAGLLSLFIFTKKGPHPATFDMSEKWTHEPILWAADE----PADHGHGG 56 Query 63 DASEFTVGGGASGTW 77 S T+GGGASG W Sbjct 57 HGSHLTIGGGASGKW 71 >gi|118470221|ref|YP_888954.1| hypothetical protein MSMEG_4693 [Mycobacterium smegmatis str. MC2 155] gi|399988973|ref|YP_006569323.1| hypothetical protein MSMEI_4576 [Mycobacterium smegmatis str. MC2 155] gi|118171508|gb|ABK72404.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] gi|399233535|gb|AFP41028.1| hypothetical protein MSMEI_4576 [Mycobacterium smegmatis str. MC2 155] Length=79 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/74 (57%), Positives = 53/74 (72%), Gaps = 1/74 (1%) Query 4 HLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGHGHD 63 H G+PL+L VL+++ +RKGPHP TYK+S+PWTH PILWAA +E HGGHGHD Sbjct 7 HGLIGGVPLVLFAVLALIFLTRKGPHPDTYKMSDPWTHAPILWAA-EEPREHGHGGHGHD 65 Query 64 ASEFTVGGGASGTW 77 + +GGGASG W Sbjct 66 SHGVVIGGGASGKW 79 >gi|353188443|gb|EHB53964.1| hypothetical protein MycrhDRAFT_4427 [Mycobacterium rhodesiae JS60] Length=79 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 41/75 (55%), Positives = 46/75 (62%), Gaps = 1/75 (1%) Query 3 IHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGHGH 62 +H FV IP L VL +L K H TY +S+PWTH PILWAA DEVV G HGH Sbjct 6 VHGLFVAIPFGLAAVLYLLYVPGKSKHAKTYNMSDPWTHAPILWAAVDEVV-PGGGHHGH 64 Query 63 DASEFTVGGGASGTW 77 A + VGGGASG W Sbjct 65 SAGDVNVGGGASGKW 79 >gi|108800574|ref|YP_640771.1| hypothetical protein Mmcs_3608 [Mycobacterium sp. MCS] gi|119869713|ref|YP_939665.1| hypothetical protein Mkms_3681 [Mycobacterium sp. KMS] gi|126436190|ref|YP_001071881.1| hypothetical protein Mjls_3613 [Mycobacterium sp. JLS] gi|108770993|gb|ABG09715.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119695802|gb|ABL92875.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126235990|gb|ABN99390.1| hypothetical protein Mjls_3613 [Mycobacterium sp. JLS] Length=89 Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/77 (49%), Positives = 47/77 (62%), Gaps = 14/77 (18%) Query 15 VVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATD------------EVVGSAHGGH-- 60 VL++LI+ KGPHPA+YKLSEPW H PILWAA + + +AHGG+ Sbjct 13 TAVLALLIFRGKGPHPASYKLSEPWRHSPILWAADEPAHQEHATGHSIQADSAAHGGNVG 72 Query 61 GHDASEFTVGGGASGTW 77 H + T+GGGASG W Sbjct 73 EHHSHPVTIGGGASGKW 89 >gi|392417305|ref|YP_006453910.1| hypothetical protein Mycch_3494 [Mycobacterium chubuense NBB4] gi|390617081|gb|AFM18231.1| hypothetical protein Mycch_3494 [Mycobacterium chubuense NBB4] Length=71 Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 36/75 (48%), Positives = 50/75 (67%), Gaps = 4/75 (5%) Query 3 IHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGHGH 62 +H + +PL L +LS+ I+++KGPHP TY+++E WTH PILWAA + A GHG Sbjct 1 MHASLLVVPLALAGILSLFIFTKKGPHPKTYQIAETWTHEPILWAAEE----PADHGHGG 56 Query 63 DASEFTVGGGASGTW 77 + T+GGGASG W Sbjct 57 HGAHLTIGGGASGKW 71 >gi|404446466|ref|ZP_11011577.1| hypothetical protein MVAC_24421 [Mycobacterium vaccae ATCC 25954] gi|403650423|gb|EJZ05665.1| hypothetical protein MVAC_24421 [Mycobacterium vaccae ATCC 25954] Length=60 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/64 (52%), Positives = 43/64 (68%), Gaps = 4/64 (6%) Query 14 LVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGHGHDASEFTVGGGA 73 + +LS+ I+++KGPHP T+ +S WTH PILWAA +E HGGH S T+GGGA Sbjct 1 MAGLLSLFIFTKKGPHPETFDMSGKWTHEPILWAA-EEPADHGHGGH---DSHLTIGGGA 56 Query 74 SGTW 77 SG W Sbjct 57 SGKW 60 >gi|404419187|ref|ZP_11000948.1| hypothetical protein MFORT_02303 [Mycobacterium fortuitum subsp. fortuitum DSM 46621] gi|403661336|gb|EJZ15852.1| hypothetical protein MFORT_02303 [Mycobacterium fortuitum subsp. fortuitum DSM 46621] Length=62 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/65 (57%), Positives = 46/65 (71%), Gaps = 3/65 (4%) Query 13 LLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGHGHDASEFTVGGG 72 +L VVL+++ RKGPHP TYK+S+PWTH PILWAA + HG GHD+ T+GGG Sbjct 1 MLFVVLALIYLPRKGPHPDTYKMSDPWTHEPILWAAEEP---QDHGHGGHDSHGVTIGGG 57 Query 73 ASGTW 77 ASG W Sbjct 58 ASGKW 62 >gi|312140372|ref|YP_004007708.1| membrane protein [Rhodococcus equi 103S] gi|325676018|ref|ZP_08155701.1| hypothetical protein HMPREF0724_13483 [Rhodococcus equi ATCC 33707] gi|311889711|emb|CBH49028.1| putative membrane protein [Rhodococcus equi 103S] gi|325553256|gb|EGD22935.1| hypothetical protein HMPREF0724_13483 [Rhodococcus equi ATCC 33707] Length=82 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/81 (44%), Positives = 49/81 (61%), Gaps = 6/81 (7%) Query 1 MEIHLFFVGIPLLLVVVLSVL-IWSRKGPH--PATYKLSEPWTHPPILWAATDEVVGSAH 57 +E L FVGIP+L++ +++ L ++K P P Y+L E WTH P+LW+A DEV + H Sbjct 4 LETVLIFVGIPVLVIAIVAGLSFMTKKSPGFVPTEYRLGERWTHQPVLWSAVDEV--TTH 61 Query 58 GGH-GHDASEFTVGGGASGTW 77 G H H +GG ASG W Sbjct 62 GHHAAHAVGADAIGGSASGKW 82 >gi|296139118|ref|YP_003646361.1| hypothetical protein [Tsukamurella paurometabola DSM 20162] gi|296027252|gb|ADG78022.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=85 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/73 (46%), Positives = 43/73 (59%), Gaps = 5/73 (6%) Query 10 IPLLLVVVLSVLIW----SRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGG-HGHDA 64 I ++VVVL V+ + K P YKL EPWT P+L++A DE + HG HG DA Sbjct 13 IATIIVVVLCVISMATGRNEKYQQPGEYKLGEPWTREPLLFSAVDEAPVAPHGAHHGDDA 72 Query 65 SEFTVGGGASGTW 77 +E +GG ASG W Sbjct 73 NENLIGGAASGKW 85 >gi|374607581|ref|ZP_09680382.1| hypothetical protein MyctuDRAFT_0436 [Mycobacterium tusciae JS617] gi|373555417|gb|EHP81987.1| hypothetical protein MyctuDRAFT_0436 [Mycobacterium tusciae JS617] Length=79 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/54 (62%), Positives = 35/54 (65%), Gaps = 5/54 (9%) Query 24 SRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGHGHDASEFTVGGGASGTW 77 RK PHP TYK+S+ WTH PILWAA DE HGGH TVGGGASG W Sbjct 31 KRKDPHPETYKMSDQWTHEPILWAA-DEPADHGHGGH----HPVTVGGGASGKW 79 >gi|392123209|gb|EIU48971.1| hypothetical protein MA6G0125S_1614 [Mycobacterium abscessus 6G-0125-S] gi|392133918|gb|EIU59660.1| hypothetical protein MA6G0728S_0508 [Mycobacterium abscessus 6G-0728-S] gi|392201213|gb|EIV26814.1| hypothetical protein MA3A0119R_1650 [Mycobacterium abscessus 3A-0119-R] gi|392215533|gb|EIV41081.1| hypothetical protein MA3A0731_1614 [Mycobacterium abscessus 3A-0731] gi|392230714|gb|EIV56224.1| hypothetical protein MA3A0930S_1299 [Mycobacterium abscessus 3A-0930-S] Length=94 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/78 (49%), Positives = 50/78 (65%), Gaps = 7/78 (8%) Query 7 FVGIPL---LLVVVLSVLI--WS--RKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGG 59 ++G+P+ L+ V VLI W+ +KGPHPATY +++ WTH PILWAA DE +G AHG Sbjct 17 YIGMPVWVALITPVAFVLIGLWTMRKKGPHPATYNMNDGWTHGPILWAAVDENIGDAHGH 76 Query 60 HGHDASEFTVGGGASGTW 77 A +GG ASG W Sbjct 77 GHGHAGAEAIGGSASGKW 94 >gi|382945697|gb|EIC69989.1| hypothetical protein S7W_06662 [Mycobacterium abscessus M94] Length=86 Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 38/78 (49%), Positives = 50/78 (65%), Gaps = 7/78 (8%) Query 7 FVGIPL---LLVVVLSVLI--WS--RKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGG 59 ++G+P+ L+ V VLI W+ +KGPHPATY +++ WTH PILWAA DE +G AHG Sbjct 9 YIGMPVWVALITPVAFVLIGLWTMRKKGPHPATYNMNDGWTHGPILWAAVDENIGDAHGH 68 Query 60 HGHDASEFTVGGGASGTW 77 A +GG ASG W Sbjct 69 GHGHAGAKAIGGSASGKW 86 >gi|169628658|ref|YP_001702307.1| hypothetical protein MAB_1568 [Mycobacterium abscessus ATCC 19977] gi|365869548|ref|ZP_09409095.1| hypothetical protein MMAS_14970 [Mycobacterium massiliense CCUG 48898] gi|169240625|emb|CAM61653.1| Conserved hypothetical protein [Mycobacterium abscessus] 36 more sequence titles Length=86 Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 38/78 (49%), Positives = 50/78 (65%), Gaps = 7/78 (8%) Query 7 FVGIPL---LLVVVLSVLI--WS--RKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGG 59 ++G+P+ L+ V VLI W+ +KGPHPATY +++ WTH PILWAA DE +G AHG Sbjct 9 YIGMPVWVALITPVAFVLIGLWTMRKKGPHPATYNMNDGWTHGPILWAAVDENIGDAHGH 68 Query 60 HGHDASEFTVGGGASGTW 77 A +GG ASG W Sbjct 69 GHGHAGAEAIGGSASGKW 86 >gi|375141188|ref|YP_005001837.1| hypothetical protein [Mycobacterium rhodesiae NBB3] gi|359821809|gb|AEV74622.1| hypothetical protein MycrhN_4118 [Mycobacterium rhodesiae NBB3] Length=65 Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 38/66 (58%), Positives = 44/66 (67%), Gaps = 3/66 (4%) Query 12 LLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGHGHDASEFTVGG 71 L+L+ + V+ RK PHPATYKLSE WTH PILWAA + + HG GH A TVGG Sbjct 3 LVLIFFIYVVGPKRKNPHPATYKLSEQWTHDPILWAADEP---ADHGHGGHGAHPVTVGG 59 Query 72 GASGTW 77 GASG W Sbjct 60 GASGKW 65 >gi|407984443|ref|ZP_11165061.1| hypothetical protein C731_3033 [Mycobacterium hassiacum DSM 44199] gi|407374030|gb|EKF23028.1| hypothetical protein C731_3033 [Mycobacterium hassiacum DSM 44199] Length=81 Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 36/79 (46%), Positives = 43/79 (55%), Gaps = 7/79 (8%) Query 3 IHLFFVGIPLLLVVVLSVLIW----SRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHG 58 IH +PL + ++L LI+ +RKGPH TY LSEPWTH PILWAA + Sbjct 6 IHTLVGAVPLGVTLILIFLIYGVGKNRKGPHEKTYNLSEPWTHGPILWAAEEPAAHGH-- 63 Query 59 GHGHDASEFTVGGGASGTW 77 H VGGGASG W Sbjct 64 -GAHGGDHQIVGGGASGKW 81 >gi|363420174|ref|ZP_09308268.1| membrane protein [Rhodococcus pyridinivorans AK37] gi|359735970|gb|EHK84921.1| membrane protein [Rhodococcus pyridinivorans AK37] Length=90 Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 39/87 (45%), Positives = 47/87 (55%), Gaps = 10/87 (11%) Query 1 MEIHLFFVGIPLLLVVV---LSVLIWSRKGPHPAT--YKLSEPWTHPPILWAATDEVV-- 53 +E L FVGIPLL+V+V LS ++ G P+ Y L W H P+LW ATDE Sbjct 4 LETTLIFVGIPLLIVLVFGGLSFVLSKYPGSTPSDDPYTLDRKWEHGPLLWTATDESTHP 63 Query 54 -GSAHGGHGHDA--SEFTVGGGASGTW 77 H GHGH A S +GG ASG W Sbjct 64 WKYPHHGHGHAALTSAELIGGTASGKW 90 >gi|383308248|ref|YP_005361059.1| hypothetical protein MRGA327_15225 [Mycobacterium tuberculosis RGTB327] gi|380722201|gb|AFE17310.1| hypothetical protein MRGA327_15225 [Mycobacterium tuberculosis RGTB327] Length=62 Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 36/36 (100%), Positives = 36/36 (100%), Gaps = 0/36 (0%) Query 1 MEIHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLS 36 MEIHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLS Sbjct 1 MEIHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLS 36 >gi|382939080|gb|EIC63409.1| hypothetical protein OUW_19536 [Mycobacterium abscessus M93] Length=88 Score = 54.3 bits (129), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 37/80 (47%), Positives = 49/80 (62%), Gaps = 9/80 (11%) Query 7 FVGIPL---LLVVVLSVLI--WS--RKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGG 59 ++G+P+ L+ V VLI W+ +KGPHPATY +++ WTH PILWAA DE +G AHG Sbjct 9 YIGMPVWVALITPVAFVLIGLWTMRKKGPHPATYNMNDGWTHGPILWAAVDENIGDAHGH 68 Query 60 HGHDASEF--TVGGGASGTW 77 +GG ASG W Sbjct 69 GHGHGHAGAEAIGGSASGKW 88 >gi|54023283|ref|YP_117525.1| hypothetical protein nfa13160 [Nocardia farcinica IFM 10152] gi|54014791|dbj|BAD56161.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=90 Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 33/87 (38%), Positives = 51/87 (59%), Gaps = 10/87 (11%) Query 1 MEIHLFFVGIPLLLVVVLSVLIWSRK---GPHPATYKLSEPWTHPPILWAATDEVVG--- 54 +E L FVGIPL++ ++ L + K G P ++L + WTH P+LW+ATDEV G Sbjct 4 LETVLIFVGIPLVIYAAIAGLSFLGKPLPGEKPVHFELGQKWTHAPVLWSATDEVTGHGH 63 Query 55 ---SAHGGHGH-DASEFTVGGGASGTW 77 + HG H ++++ +GG ASG + Sbjct 64 HDTAPHGSHAAIESAQELIGGRASGKF 90 >gi|384565192|ref|ZP_10012296.1| hypothetical protein SacglDRAFT_01313 [Saccharomonospora glauca K62] gi|384521046|gb|EIE98241.1| hypothetical protein SacglDRAFT_01313 [Saccharomonospora glauca K62] Length=82 Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 28/79 (36%), Positives = 39/79 (50%), Gaps = 2/79 (2%) Query 1 MEIHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGH 60 +E L FV IPL + V +++ K Y+ + W +PP+ W+A E VG H G Sbjct 4 LETILVFVAIPLAVFVFFALVTLRSKFASRPRYRPGQAWDYPPVWWSANPEGVGRRHAGD 63 Query 61 GH--DASEFTVGGGASGTW 77 D + V GGASG W Sbjct 64 AEHGDTAPSKVRGGASGNW 82 >gi|354613364|ref|ZP_09031287.1| hypothetical protein SacpaDRAFT_0694 [Saccharomonospora paurometabolica YIM 90007] gi|353222304|gb|EHB86619.1| hypothetical protein SacpaDRAFT_0694 [Saccharomonospora paurometabolica YIM 90007] Length=92 Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 27/77 (36%), Positives = 36/77 (47%), Gaps = 1/77 (1%) Query 1 MEIHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGH 60 +E L FV IP+ + +++ K Y+ +PW HPP+ WAA E G H Sbjct 17 LETTLVFVAIPVAIYAFFALVTLRSKFASRPRYRPGQPWDHPPVWWAANPEGAGERHTEA 76 Query 61 GHDASEFTVGGGASGTW 77 G A T GGA G W Sbjct 77 GKSAPS-TARGGARGNW 92 >gi|226360515|ref|YP_002778293.1| hypothetical protein ROP_11010 [Rhodococcus opacus B4] gi|226239000|dbj|BAH49348.1| hypothetical protein [Rhodococcus opacus B4] Length=86 Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 33/83 (40%), Positives = 42/83 (51%), Gaps = 6/83 (7%) Query 1 MEIHLFFVGIPLLLVVVLSVLIWSRK---GPHPATYKLSEPWTHPPILWAATDEVV---G 54 +E L FVGIP L+ + + + K GP P + L E WTH P+LW+A DEV Sbjct 4 LETVLIFVGIPALITAFFAAMSFVGKKTPGPVPPAFHLGEEWTHAPVLWSAVDEVTTHGH 63 Query 55 SAHGGHGHDASEFTVGGGASGTW 77 H SE +GG ASG W Sbjct 64 HGGHHGAHAGSEDLIGGSASGKW 86 >gi|407279584|ref|ZP_11108054.1| membrane protein [Rhodococcus sp. P14] Length=87 Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 36/84 (43%), Positives = 44/84 (53%), Gaps = 7/84 (8%) Query 1 MEIHLFFVGIPLLLVV---VLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAH 57 +E L FV IP+ ++V V SV G PA YKL E W H P+LW+A DEV H Sbjct 4 LETTLIFVAIPVAIIVIFGVFSVFTKPIPGTRPAEYKLGEKWDHEPMLWSAVDEVTTHGH 63 Query 58 GGHGHD----ASEFTVGGGASGTW 77 G H+ A +GG ASG W Sbjct 64 HGGHHELVAGAPVDPIGGRASGKW 87 >gi|226307311|ref|YP_002767271.1| hypothetical protein RER_38240 [Rhodococcus erythropolis PR4] gi|229493134|ref|ZP_04386926.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|226186428|dbj|BAH34532.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] gi|229319865|gb|EEN85694.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=103 Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 33/84 (40%), Positives = 43/84 (52%), Gaps = 7/84 (8%) Query 1 MEIHLFFVGIPLLLVVVLSVLIWSRK---GPHPATYKLSEPWTHPPILWAATDEV-VGSA 56 +E+ L +VGIP L+ + + K GP P + L E W H P+LW+A DEV V Sbjct 20 LEVVLIYVGIPALITAFFAAASFLGKKTPGPVPPAFHLGESWDHAPVLWSAVDEVTVRGG 79 Query 57 HGGHGH---DASEFTVGGGASGTW 77 H G H S +GG ASG W Sbjct 80 HHGSAHAIEAGSADLIGGSASGKW 103 >gi|379707559|ref|YP_005262764.1| hypothetical protein NOCYR_1326 [Nocardia cyriacigeorgica GUH-2] gi|374845058|emb|CCF62122.1| conserved protein of unknown function [Nocardia cyriacigeorgica GUH-2] Length=85 Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 36/84 (43%), Positives = 47/84 (56%), Gaps = 11/84 (13%) Query 5 LFFVGIPLLLVVVLSVLIWSRK---GPHPATYKLSEPWTHPPILWAATDEVVGSAH---G 58 L FVGIPL++ V++ L + K G P Y LS+ WT P+LW+ATDEV H Sbjct 2 LIFVGIPLVIYGVIAGLSFLGKPLPGEKPVHYDLSKKWTSEPVLWSATDEVTVYGHHIAE 61 Query 59 GHGHDASEFT-----VGGGASGTW 77 HGH A+ T +GG ASG + Sbjct 62 SHGHHAAIETADAELIGGRASGRF 85 >gi|378586939|ref|ZP_09835494.1| hypothetical protein SazuN_19623 [Saccharomonospora azurea NA-128] gi|381165066|ref|ZP_09874296.1| hypothetical protein SacazDRAFT_04044 [Saccharomonospora azurea NA-128] gi|359740500|gb|EHK89341.1| hypothetical protein SZMC14600_00595 [Saccharomonospora azurea SZMC 14600] gi|379256971|gb|EHY90897.1| hypothetical protein SacazDRAFT_04044 [Saccharomonospora azurea NA-128] Length=82 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/79 (36%), Positives = 37/79 (47%), Gaps = 2/79 (2%) Query 1 MEIHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGH 60 +E L FV IPL + +++ K Y+ + W +PP+ WAA E VG H G Sbjct 4 LETILVFVAIPLAVYGFFALVTLRSKFASKPRYRPGQAWDYPPVWWAANPEGVGQRHAGD 63 Query 61 GH--DASEFTVGGGASGTW 77 D V GGASG W Sbjct 64 AEHGDGVPSKVRGGASGNW 82 >gi|407642909|ref|YP_006806668.1| hypothetical protein O3I_008655 [Nocardia brasiliensis ATCC 700358] gi|407305793|gb|AFT99693.1| hypothetical protein O3I_008655 [Nocardia brasiliensis ATCC 700358] Length=144 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/77 (41%), Positives = 42/77 (55%), Gaps = 7/77 (9%) Query 1 MEIHLFFVGIPLLL---VVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAH 57 +E L F GIPL++ + LS L G PA Y L + WT P+LW+ATDEV + H Sbjct 48 LETVLIFGGIPLVIYGAIAGLSYLGKPLAGEKPAHYDLGQQWTSAPVLWSATDEVTSAVH 107 Query 58 GGHGHDASEFTVGGGAS 74 H+ +E + GG A Sbjct 108 ----HERAEESHGGHAE 120 >gi|257055234|ref|YP_003133066.1| hypothetical protein Svir_11850 [Saccharomonospora viridis DSM 43017] gi|256585106|gb|ACU96239.1| hypothetical protein Svir_11850 [Saccharomonospora viridis DSM 43017] Length=81 Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 28/78 (36%), Positives = 37/78 (48%), Gaps = 1/78 (1%) Query 1 MEIHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHG-G 59 +E L FV IPL + S++ K Y+ + W +PP+ W A E VG H G Sbjct 4 LETILVFVAIPLAVYGFFSLVTLRSKFASRPRYRPGQAWDYPPVWWTANPEGVGQRHADG 63 Query 60 HGHDASEFTVGGGASGTW 77 + TV GGASG W Sbjct 64 ADEGTAPSTVRGGASGNW 81 >gi|384101112|ref|ZP_10002165.1| hypothetical protein W59_07090 [Rhodococcus imtechensis RKJ300] gi|356662390|gb|EHI42689.1| hypothetical protein OPAG_05613 [Rhodococcus opacus PD630] gi|383841418|gb|EID80699.1| hypothetical protein W59_07090 [Rhodococcus imtechensis RKJ300] Length=86 Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 32/83 (39%), Positives = 41/83 (50%), Gaps = 6/83 (7%) Query 1 MEIHLFFVGIPLLLVVVLSVLIWSRK---GPHPATYKLSEPWTHPPILWAATDEVV---G 54 +E L FVGIP L+ + + + K GP P + L E WTH P+LW+A DEV Sbjct 4 LETVLIFVGIPALITAFFAGMSFVGKKTPGPVPPAFHLGEEWTHAPVLWSAVDEVTTHGH 63 Query 55 SAHGGHGHDASEFTVGGGASGTW 77 H S +GG ASG W Sbjct 64 HGGHHGAHAGSADLIGGSASGKW 86 >gi|378816074|ref|ZP_09839006.1| hypothetical protein O3I_15214 [Nocardia brasiliensis ATCC 700358] gi|378593439|gb|EHY27285.1| hypothetical protein O3I_15214 [Nocardia brasiliensis ATCC 700358] Length=94 Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 30/73 (42%), Positives = 40/73 (55%), Gaps = 7/73 (9%) Query 5 LFFVGIPLLL---VVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGHG 61 L F GIPL++ + LS L G PA Y L + WT P+LW+ATDEV + H Sbjct 2 LIFGGIPLVIYGAIAGLSYLGKPLAGEKPAHYDLGQQWTSAPVLWSATDEVTSAVH---- 57 Query 62 HDASEFTVGGGAS 74 H+ +E + GG A Sbjct 58 HERAEESHGGHAE 70 >gi|383828284|ref|ZP_09983373.1| hypothetical protein SacxiDRAFT_0760 [Saccharomonospora xinjiangensis XJ-54] gi|383460937|gb|EID53027.1| hypothetical protein SacxiDRAFT_0760 [Saccharomonospora xinjiangensis XJ-54] Length=91 Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 29/79 (37%), Positives = 40/79 (51%), Gaps = 3/79 (3%) Query 1 MEIHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVG--SAHG 58 +E L FV IPL + +++ K Y+ + W +PP+ W A E G +A Sbjct 14 LETILVFVAIPLAVYGFFALVTLRSKFASRPRYRPGQAWDYPPVWWTANPEGAGQHTADS 73 Query 59 GHGHDASEFTVGGGASGTW 77 GHG DA+ V GGASG W Sbjct 74 GHG-DAAPSKVRGGASGNW 91 >gi|375099709|ref|ZP_09745972.1| hypothetical protein SaccyDRAFT_1413 [Saccharomonospora cyanea NA-134] gi|374660441|gb|EHR60319.1| hypothetical protein SaccyDRAFT_1413 [Saccharomonospora cyanea NA-134] Length=82 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/79 (35%), Positives = 36/79 (46%), Gaps = 2/79 (2%) Query 1 MEIHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGH 60 +E L FV IPL + +++ K Y+ + W +PP+ W A E VG H Sbjct 4 LETILVFVAIPLAVYGFFALVTLRSKFASRPRYRPGQAWDYPPVWWTANPEGVGQRHADD 63 Query 61 GH--DASEFTVGGGASGTW 77 DA V GGASG W Sbjct 64 AEHGDAVPAKVRGGASGNW 82 >gi|388823724|gb|EIM46289.1| hypothetical protein WSS_17475 [Rhodococcus opacus M213] Length=80 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/79 (40%), Positives = 39/79 (50%), Gaps = 6/79 (7%) Query 5 LFFVGIPLLLVVVLSVLIWSRK---GPHPATYKLSEPWTHPPILWAATDEVV---GSAHG 58 L FVGIP L+ + + + K GP P + L E WTH P+LW+A DEV Sbjct 2 LIFVGIPALITAFFAGMSFVGKKTPGPVPPAFHLGEEWTHAPVLWSAVDEVTTHGHHGGH 61 Query 59 GHGHDASEFTVGGGASGTW 77 H S +GG ASG W Sbjct 62 HGAHAGSADLIGGSASGKW 80 >gi|111018394|ref|YP_701366.1| hypothetical protein RHA1_ro01386 [Rhodococcus jostii RHA1] gi|397730736|ref|ZP_10497492.1| hypothetical protein JVH1_1907 [Rhodococcus sp. JVH1] gi|110817924|gb|ABG93208.1| conserved hypothetical protein [Rhodococcus jostii RHA1] gi|396933358|gb|EJJ00512.1| hypothetical protein JVH1_1907 [Rhodococcus sp. JVH1] Length=86 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/83 (41%), Positives = 43/83 (52%), Gaps = 6/83 (7%) Query 1 MEIHLFFVGIPLLLVVVLSVLIWSRK---GPHPATYKLSEPWTHPPILWAATDEVVGSAH 57 +E L FVGIP L+ + + + K GP P + L E WTH P+LW+A DEV H Sbjct 4 LETVLIFVGIPALITAFFAGMSFVGKKTPGPVPPAFHLGEEWTHAPVLWSAVDEVTTHGH 63 Query 58 GGHGHD---ASEFTVGGGASGTW 77 G H S +GG ASG W Sbjct 64 HGGHHGVHAGSADLIGGSASGKW 86 Lambda K H 0.320 0.139 0.475 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 180016973418 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Oct 14, 2012 4:13 PM Number of letters in database: 7,218,481,314 Number of sequences in database: 21,062,489 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40