BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2479c

Length=328
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15609304|ref|NP_216683.1|  transposase [Mycobacterium tubercul...   673    0.0   
gi|15609786|ref|NP_217165.1|  transposase IS6110 [Mycobacterium t...   672    0.0   
gi|15607936|ref|NP_215311.1|  transposase IS6110 [Mycobacterium t...   640    0.0   
gi|15608509|ref|NP_215885.1|  transposase [Mycobacterium tubercul...   602    3e-170
gi|340626763|ref|YP_004745215.1|  putative transposase [Mycobacte...   600    1e-169
gi|339295026|gb|AEJ47137.1|  transposase IS6110 [Mycobacterium tu...   600    1e-169
gi|15839786|ref|NP_334823.1|  IS6110, transposase [Mycobacterium ...   600    1e-169
gi|340628163|ref|YP_004746615.1|  putative transposase [Mycobacte...   600    1e-169
gi|148662490|ref|YP_001284013.1|  IS6110 transposase [Mycobacteri...   599    2e-169
gi|289448475|ref|ZP_06438219.1|  transposase [Mycobacterium tuber...   599    2e-169
gi|339295661|gb|AEJ47772.1|  transposase IS6110 [Mycobacterium tu...   598    3e-169
gi|339296154|gb|AEJ48265.1|  transposase IS6110 [Mycobacterium tu...   598    4e-169
gi|339295256|gb|AEJ47367.1|  transposase IS6110 [Mycobacterium tu...   597    6e-169
gi|289443509|ref|ZP_06433253.1|  transposase [Mycobacterium tuber...   597    6e-169
gi|339294707|gb|AEJ46818.1|  transposase IS6110 [Mycobacterium tu...   597    7e-169
gi|339294127|gb|AEJ46238.1|  transposase IS6110 [Mycobacterium tu...   593    2e-167
gi|289442243|ref|ZP_06431987.1|  transposase [Mycobacterium tuber...   587    6e-166
gi|326903092|gb|EGE50025.1|  transposase [Mycobacterium tuberculo...   578    4e-163
gi|298526285|ref|ZP_07013694.1|  conserved hypothetical protein [...   570    1e-160
gi|31793990|ref|NP_856483.1|  transposase [Mycobacterium bovis AF...   568    5e-160
gi|323718586|gb|EGB27751.1|  transposase [Mycobacterium tuberculo...   566    2e-159
gi|289759146|ref|ZP_06518524.1|  transposase [Mycobacterium tuber...   565    2e-159
gi|289570120|ref|ZP_06450347.1|  transposase [Mycobacterium tuber...   556    2e-156
gi|326903628|gb|EGE50561.1|  integrase [Mycobacterium tuberculosi...   526    1e-147
gi|340627301|ref|YP_004745753.1|  putative transposase for insert...   512    3e-143
gi|340628312|ref|YP_004746764.1|  is6110, transposase [Mycobacter...   504    7e-141
gi|126434808|ref|YP_001070499.1|  integrase catalytic subunit [My...   493    2e-137
gi|289761914|ref|ZP_06521292.1|  conserved hypothetical protein [...   475    4e-132
gi|339299467|gb|AEJ51577.1|  transposase IS6110 [Mycobacterium tu...   468    5e-130
gi|326902443|gb|EGE49376.1|  transposase [Mycobacterium tuberculo...   453    2e-125
gi|298525252|ref|ZP_07012661.1|  conserved hypothetical protein [...   437    1e-120
gi|289758224|ref|ZP_06517602.1|  transposase [Mycobacterium tuber...   436    3e-120
gi|289761475|ref|ZP_06520853.1|  transposase [Mycobacterium tuber...   401    6e-110
gi|258652726|ref|YP_003201882.1|  Integrase catalytic subunit [Na...   396    2e-108
gi|254233938|ref|ZP_04927263.1|  hypothetical protein TBCG_03270 ...   390    1e-106
gi|166836367|gb|ABY90415.1|  TnpA [Mycobacterium smegmatis]            385    6e-105
gi|163839898|ref|YP_001624303.1|  IS994 [Renibacterium salmoninar...   384    8e-105
gi|163840515|ref|YP_001624920.1|  IS994 [Renibacterium salmoninar...   384    2e-104
gi|163839350|ref|YP_001623755.1|  IS994 [Renibacterium salmoninar...   383    2e-104
gi|163839336|ref|YP_001623741.1|  IS994 [Renibacterium salmoninar...   382    3e-104
gi|163841496|ref|YP_001625901.1|  IS994 [Renibacterium salmoninar...   382    5e-104
gi|163841333|ref|YP_001625738.1|  IS994 [Renibacterium salmoninar...   382    5e-104
gi|163841612|ref|YP_001626017.1|  IS994 [Renibacterium salmoninar...   381    7e-104
gi|163840941|ref|YP_001625346.1|  IS994 [Renibacterium salmoninar...   381    8e-104
gi|163840656|ref|YP_001625061.1|  IS994 [Renibacterium salmoninar...   381    9e-104
gi|163840353|ref|YP_001624758.1|  IS994 [Renibacterium salmoninar...   381    1e-103
gi|163841184|ref|YP_001625589.1|  IS994 [Renibacterium salmoninar...   381    1e-103
gi|163839133|ref|YP_001623538.1|  IS994 [Renibacterium salmoninar...   380    1e-103
gi|163840017|ref|YP_001624422.1|  IS994 [Renibacterium salmoninar...   380    1e-103
gi|163839700|ref|YP_001624105.1|  IS994 [Renibacterium salmoninar...   380    1e-103


>gi|15609304|ref|NP_216683.1| transposase [Mycobacterium tuberculosis H37Rv]
 gi|15609616|ref|NP_216995.1| transposase [Mycobacterium tuberculosis H37Rv]
 gi|15610611|ref|NP_217992.1| transposase IS6110 [Mycobacterium tuberculosis H37Rv]
 8 more sequence titles
 Length=346

 Score =  673 bits (1736),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 328/328 (100%), Positives = 328/328 (100%), Gaps = 0/328 (0%)

Query  1    KDRVGFLRGRARPASTLITRFIADHQGHREGPDGLRWGVESICTQLTELGVPIAPSTYYD  60
            KDRVGFLRGRARPASTLITRFIADHQGHREGPDGLRWGVESICTQLTELGVPIAPSTYYD
Sbjct  19   KDRVGFLRGRARPASTLITRFIADHQGHREGPDGLRWGVESICTQLTELGVPIAPSTYYD  78

Query  61   HINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVARCTVERLMTKLG  120
            HINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVARCTVERLMTKLG
Sbjct  79   HINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVARCTVERLMTKLG  138

Query  121  LSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTD  180
            LSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTD
Sbjct  139  LSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTD  198

Query  181  AYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSIRFSER  240
            AYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSIRFSER
Sbjct  199  AYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSIRFSER  258

Query  241  LAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELATARWVDWFNHR  300
            LAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELATARWVDWFNHR
Sbjct  259  LAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELATARWVDWFNHR  318

Query  301  RLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            RLYQYCGDVPPVELEAAYYAQRQRPAAG
Sbjct  319  RLYQYCGDVPPVELEAAYYAQRQRPAAG  346


>gi|15609786|ref|NP_217165.1| transposase IS6110 [Mycobacterium tuberculosis H37Rv]
 gi|3242268|emb|CAB02367.1| PROBABLE TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT IS6110 [Mycobacterium 
tuberculosis H37Rv]
Length=328

 Score =  672 bits (1733),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 328/328 (100%), Positives = 328/328 (100%), Gaps = 0/328 (0%)

Query  1    KDRVGFLRGRARPASTLITRFIADHQGHREGPDGLRWGVESICTQLTELGVPIAPSTYYD  60
            KDRVGFLRGRARPASTLITRFIADHQGHREGPDGLRWGVESICTQLTELGVPIAPSTYYD
Sbjct  1    KDRVGFLRGRARPASTLITRFIADHQGHREGPDGLRWGVESICTQLTELGVPIAPSTYYD  60

Query  61   HINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVARCTVERLMTKLG  120
            HINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVARCTVERLMTKLG
Sbjct  61   HINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVARCTVERLMTKLG  120

Query  121  LSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTD  180
            LSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTD
Sbjct  121  LSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTD  180

Query  181  AYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSIRFSER  240
            AYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSIRFSER
Sbjct  181  AYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSIRFSER  240

Query  241  LAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELATARWVDWFNHR  300
            LAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELATARWVDWFNHR
Sbjct  241  LAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELATARWVDWFNHR  300

Query  301  RLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            RLYQYCGDVPPVELEAAYYAQRQRPAAG
Sbjct  301  RLYQYCGDVPPVELEAAYYAQRQRPAAG  328


>gi|15607936|ref|NP_215311.1| transposase IS6110 [Mycobacterium tuberculosis H37Rv]
 gi|15609243|ref|NP_216622.1| transposase [Mycobacterium tuberculosis H37Rv]
 gi|15609416|ref|NP_216795.1| transposase [Mycobacterium tuberculosis H37Rv]
 15 more sequence titles
 Length=312

 Score =  640 bits (1652),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 312/312 (100%), Positives = 312/312 (100%), Gaps = 0/312 (0%)

Query  17   LITRFIADHQGHREGPDGLRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGEL  76
            LITRFIADHQGHREGPDGLRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGEL
Sbjct  1    LITRFIADHQGHREGPDGLRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGEL  60

Query  77   KEHISRVHAANYGVYGARKVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIAD  136
            KEHISRVHAANYGVYGARKVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIAD
Sbjct  61   KEHISRVHAANYGVYGARKVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIAD  120

Query  137  PATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMA  196
            PATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMA
Sbjct  121  PATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMA  180

Query  197  TSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSS  256
            TSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSS
Sbjct  181  TSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSS  240

Query  257  YDNALAETINGLYKTELIKPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEA  316
            YDNALAETINGLYKTELIKPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEA
Sbjct  241  YDNALAETINGLYKTELIKPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEA  300

Query  317  AYYAQRQRPAAG  328
            AYYAQRQRPAAG
Sbjct  301  AYYAQRQRPAAG  312


>gi|15608509|ref|NP_215885.1| transposase [Mycobacterium tuberculosis H37Rv]
 gi|15608894|ref|NP_216272.1| putative transposase [Mycobacterium tuberculosis H37Rv]
 gi|15608902|ref|NP_216280.1| putative transposase [Mycobacterium tuberculosis H37Rv]
 453 more sequence titles
 Length=294

 Score =  602 bits (1551),  Expect = 3e-170, Method: Compositional matrix adjust.
 Identities = 293/294 (99%), Positives = 294/294 (100%), Gaps = 0/294 (0%)

Query  35   LRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  94
            +RWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR
Sbjct  1    MRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  60

Query  95   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  154
            KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA
Sbjct  61   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  120

Query  155  PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  214
            PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE
Sbjct  121  PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  180

Query  215  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  274
            GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI
Sbjct  181  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  240

Query  275  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG
Sbjct  241  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  294


>gi|340626763|ref|YP_004745215.1| putative transposase [Mycobacterium canettii CIPT 140010059]
 gi|340004953|emb|CCC44101.1| putative transposase [Mycobacterium canettii CIPT 140010059]
Length=294

 Score =  600 bits (1546),  Expect = 1e-169, Method: Compositional matrix adjust.
 Identities = 292/294 (99%), Positives = 293/294 (99%), Gaps = 0/294 (0%)

Query  35   LRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  94
            +RWGVESICTQLTELGVPI PSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR
Sbjct  1    MRWGVESICTQLTELGVPITPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  60

Query  95   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  154
            KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA
Sbjct  61   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  120

Query  155  PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  214
            PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE
Sbjct  121  PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  180

Query  215  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  274
            GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI
Sbjct  181  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  240

Query  275  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG
Sbjct  241  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  294


>gi|339295026|gb|AEJ47137.1| transposase IS6110 [Mycobacterium tuberculosis CCDC5079]
Length=294

 Score =  600 bits (1546),  Expect = 1e-169, Method: Compositional matrix adjust.
 Identities = 292/294 (99%), Positives = 293/294 (99%), Gaps = 0/294 (0%)

Query  35   LRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  94
            +RWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR
Sbjct  1    MRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  60

Query  95   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  154
            KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADP TARPADLVQRRFGPPA
Sbjct  61   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPVTARPADLVQRRFGPPA  120

Query  155  PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  214
            PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE
Sbjct  121  PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  180

Query  215  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  274
            GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI
Sbjct  181  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  240

Query  275  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG
Sbjct  241  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  294


>gi|15839786|ref|NP_334823.1| IS6110, transposase [Mycobacterium tuberculosis CDC1551]
 gi|15841225|ref|NP_336262.1| IS6110, transposase [Mycobacterium tuberculosis CDC1551]
 gi|15842578|ref|NP_337615.1| IS6110, transposase [Mycobacterium tuberculosis CDC1551]
 gi|6249525|emb|CAB60074.1| IS6110 transposase [Mycobacterium tuberculosis H37Ra]
 gi|6523393|emb|CAB62397.1| IS6110 transposase [Mycobacterium tuberculosis H37Ra]
 gi|13879916|gb|AAK44637.1| IS6110, transposase [Mycobacterium tuberculosis CDC1551]
 gi|13881449|gb|AAK46076.1| IS6110, transposase [Mycobacterium tuberculosis CDC1551]
 gi|13882891|gb|AAK47429.1| IS6110, transposase [Mycobacterium tuberculosis CDC1551]
Length=294

 Score =  600 bits (1546),  Expect = 1e-169, Method: Compositional matrix adjust.
 Identities = 292/294 (99%), Positives = 293/294 (99%), Gaps = 0/294 (0%)

Query  35   LRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  94
            +RWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR
Sbjct  1    MRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  60

Query  95   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  154
            KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA
Sbjct  61   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  120

Query  155  PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  214
            PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE
Sbjct  121  PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  180

Query  215  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  274
             VLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI
Sbjct  181  SVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  240

Query  275  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG
Sbjct  241  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  294


>gi|340628163|ref|YP_004746615.1| putative transposase [Mycobacterium canettii CIPT 140010059]
 gi|340006353|emb|CCC45533.1| putative transposase [Mycobacterium canettii CIPT 140010059]
Length=294

 Score =  600 bits (1546),  Expect = 1e-169, Method: Compositional matrix adjust.
 Identities = 292/293 (99%), Positives = 293/293 (100%), Gaps = 0/293 (0%)

Query  35   LRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  94
            +RWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR
Sbjct  1    MRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  60

Query  95   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  154
            KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA
Sbjct  61   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  120

Query  155  PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  214
            PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE
Sbjct  121  PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  180

Query  215  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  274
            GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI
Sbjct  181  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  240

Query  275  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAA  327
            KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAA
Sbjct  241  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAA  293


>gi|148662490|ref|YP_001284013.1| IS6110 transposase [Mycobacterium tuberculosis H37Ra]
 gi|148506642|gb|ABQ74451.1| IS6110 transposase [Mycobacterium tuberculosis H37Ra]
Length=294

 Score =  599 bits (1545),  Expect = 2e-169, Method: Compositional matrix adjust.
 Identities = 292/294 (99%), Positives = 293/294 (99%), Gaps = 0/294 (0%)

Query  35   LRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  94
            +RWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR
Sbjct  1    MRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  60

Query  95   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  154
            KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA
Sbjct  61   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  120

Query  155  PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  214
            PNRLWVADLTYVSTWAGFAYV FVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE
Sbjct  121  PNRLWVADLTYVSTWAGFAYVGFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  180

Query  215  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  274
            GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI
Sbjct  181  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  240

Query  275  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG
Sbjct  241  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  294


>gi|289448475|ref|ZP_06438219.1| transposase [Mycobacterium tuberculosis CPHL_A]
 gi|289421433|gb|EFD18634.1| transposase [Mycobacterium tuberculosis CPHL_A]
Length=294

 Score =  599 bits (1545),  Expect = 2e-169, Method: Compositional matrix adjust.
 Identities = 292/294 (99%), Positives = 294/294 (100%), Gaps = 0/294 (0%)

Query  35   LRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  94
            +RWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR
Sbjct  1    MRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  60

Query  95   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  154
            KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA
Sbjct  61   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  120

Query  155  PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  214
            PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE
Sbjct  121  PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  180

Query  215  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  274
            GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYD+ALAETINGLYKTELI
Sbjct  181  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDDALAETINGLYKTELI  240

Query  275  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG
Sbjct  241  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  294


>gi|339295661|gb|AEJ47772.1| transposase IS6110 [Mycobacterium tuberculosis CCDC5079]
Length=294

 Score =  598 bits (1542),  Expect = 3e-169, Method: Compositional matrix adjust.
 Identities = 292/294 (99%), Positives = 293/294 (99%), Gaps = 0/294 (0%)

Query  35   LRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  94
            +RWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR
Sbjct  1    MRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  60

Query  95   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  154
            KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA
Sbjct  61   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  120

Query  155  PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  214
            PNRLWVADLTYVSTWAGFAYVAFVT AYARRILGWRVASTMATSMVLDAIEQAIWTRQQE
Sbjct  121  PNRLWVADLTYVSTWAGFAYVAFVTGAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  180

Query  215  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  274
            GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI
Sbjct  181  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  240

Query  275  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG
Sbjct  241  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  294


>gi|339296154|gb|AEJ48265.1| transposase IS6110 [Mycobacterium tuberculosis CCDC5079]
Length=294

 Score =  598 bits (1542),  Expect = 4e-169, Method: Compositional matrix adjust.
 Identities = 292/294 (99%), Positives = 293/294 (99%), Gaps = 0/294 (0%)

Query  35   LRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  94
            +RWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR
Sbjct  1    MRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  60

Query  95   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  154
            KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA
Sbjct  61   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  120

Query  155  PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  214
            PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE
Sbjct  121  PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  180

Query  215  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  274
            GVLDLKDVIHHTDRGS YTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI
Sbjct  181  GVLDLKDVIHHTDRGSLYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  240

Query  275  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG
Sbjct  241  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  294


>gi|339295256|gb|AEJ47367.1| transposase IS6110 [Mycobacterium tuberculosis CCDC5079]
Length=294

 Score =  597 bits (1540),  Expect = 6e-169, Method: Compositional matrix adjust.
 Identities = 291/294 (99%), Positives = 292/294 (99%), Gaps = 0/294 (0%)

Query  35   LRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  94
            +RWGVESICTQLTELGVP APSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR
Sbjct  1    MRWGVESICTQLTELGVPTAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  60

Query  95   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  154
            KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA
Sbjct  61   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  120

Query  155  PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  214
            PNRLWVADLTYVSTWAGFAYVA VTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE
Sbjct  121  PNRLWVADLTYVSTWAGFAYVALVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  180

Query  215  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  274
            GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI
Sbjct  181  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  240

Query  275  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG
Sbjct  241  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  294


>gi|289443509|ref|ZP_06433253.1| transposase [Mycobacterium tuberculosis T46]
 gi|289416428|gb|EFD13668.1| transposase [Mycobacterium tuberculosis T46]
Length=294

 Score =  597 bits (1540),  Expect = 6e-169, Method: Compositional matrix adjust.
 Identities = 292/294 (99%), Positives = 293/294 (99%), Gaps = 0/294 (0%)

Query  35   LRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  94
            +RWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR
Sbjct  1    MRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  60

Query  95   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  154
            KVWLTLNREGIEVAR TVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA
Sbjct  61   KVWLTLNREGIEVARYTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  120

Query  155  PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  214
            PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE
Sbjct  121  PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  180

Query  215  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  274
            GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI
Sbjct  181  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  240

Query  275  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG
Sbjct  241  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  294


>gi|339294707|gb|AEJ46818.1| transposase IS6110 [Mycobacterium tuberculosis CCDC5079]
Length=294

 Score =  597 bits (1540),  Expect = 7e-169, Method: Compositional matrix adjust.
 Identities = 292/294 (99%), Positives = 293/294 (99%), Gaps = 0/294 (0%)

Query  35   LRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  94
            +RWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR
Sbjct  1    MRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  60

Query  95   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  154
            KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA
Sbjct  61   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  120

Query  155  PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  214
            PNRL VADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE
Sbjct  121  PNRLGVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  180

Query  215  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  274
            GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI
Sbjct  181  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  240

Query  275  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG
Sbjct  241  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  294


>gi|339294127|gb|AEJ46238.1| transposase IS6110 [Mycobacterium tuberculosis CCDC5079]
Length=294

 Score =  593 bits (1528),  Expect = 2e-167, Method: Compositional matrix adjust.
 Identities = 289/294 (99%), Positives = 291/294 (99%), Gaps = 0/294 (0%)

Query  35   LRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  94
            +RWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR
Sbjct  1    MRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  60

Query  95   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  154
            KVWLTLNR+GIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA
Sbjct  61   KVWLTLNRDGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  120

Query  155  PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  214
            PNRLWVADLTYVST AG AYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE
Sbjct  121  PNRLWVADLTYVSTLAGLAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  180

Query  215  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  274
            GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNAL ETINGLYKTELI
Sbjct  181  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALVETINGLYKTELI  240

Query  275  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG
Sbjct  241  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  294


>gi|289442243|ref|ZP_06431987.1| transposase [Mycobacterium tuberculosis T46]
 gi|289415162|gb|EFD12402.1| transposase [Mycobacterium tuberculosis T46]
Length=294

 Score =  587 bits (1514),  Expect = 6e-166, Method: Compositional matrix adjust.
 Identities = 288/294 (98%), Positives = 289/294 (99%), Gaps = 0/294 (0%)

Query  35   LRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  94
            +RWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR
Sbjct  1    MRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  60

Query  95   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  154
            KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA
Sbjct  61   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  120

Query  155  PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  214
            PNRLWVADLTYVSTW G    AFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE
Sbjct  121  PNRLWVADLTYVSTWQGSPTWAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  180

Query  215  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  274
            GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI
Sbjct  181  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  240

Query  275  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG
Sbjct  241  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  294


>gi|326903092|gb|EGE50025.1| transposase [Mycobacterium tuberculosis W-148]
Length=283

 Score =  578 bits (1490),  Expect = 4e-163, Method: Compositional matrix adjust.
 Identities = 282/283 (99%), Positives = 283/283 (100%), Gaps = 0/283 (0%)

Query  46   LTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGI  105
            +TELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGI
Sbjct  1    MTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGI  60

Query  106  EVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTY  165
            EVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTY
Sbjct  61   EVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTY  120

Query  166  VSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHH  225
            VSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHH
Sbjct  121  VSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHH  180

Query  226  TDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIED  285
            TDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIED
Sbjct  181  TDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIED  240

Query  286  VELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            VELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG
Sbjct  241  VELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  283


>gi|298526285|ref|ZP_07013694.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|298496079|gb|EFI31373.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=293

 Score =  570 bits (1468),  Expect = 1e-160, Method: Compositional matrix adjust.
 Identities = 283/294 (97%), Positives = 285/294 (97%), Gaps = 1/294 (0%)

Query  35   LRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  94
            +RWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR
Sbjct  1    MRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  60

Query  95   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  154
            KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA
Sbjct  61   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  120

Query  155  PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  214
            PNRLWVADLTYVST        +V DAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE
Sbjct  121  PNRLWVADLTYVSTSPRLLAGGWV-DAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  179

Query  215  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  274
            GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI
Sbjct  180  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  239

Query  275  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG
Sbjct  240  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  293


>gi|31793990|ref|NP_856483.1| transposase [Mycobacterium bovis AF2122/97]
 gi|121638693|ref|YP_978917.1| putative transposase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148822539|ref|YP_001287293.1| transposase [Mycobacterium tuberculosis F11]
 37 more sequence titles
 Length=278

 Score =  568 bits (1463),  Expect = 5e-160, Method: Compositional matrix adjust.
 Identities = 277/278 (99%), Positives = 278/278 (100%), Gaps = 0/278 (0%)

Query  51   VPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVARC  110
            +PIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVARC
Sbjct  1    MPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVARC  60

Query  111  TVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWA  170
            TVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWA
Sbjct  61   TVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWA  120

Query  171  GFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGS  230
            GFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGS
Sbjct  121  GFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGS  180

Query  231  QYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELAT  290
            QYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELAT
Sbjct  181  QYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELAT  240

Query  291  ARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            ARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG
Sbjct  241  ARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  278


>gi|323718586|gb|EGB27751.1| transposase [Mycobacterium tuberculosis CDC1551A]
Length=278

 Score =  566 bits (1459),  Expect = 2e-159, Method: Compositional matrix adjust.
 Identities = 276/278 (99%), Positives = 277/278 (99%), Gaps = 0/278 (0%)

Query  51   VPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVARC  110
            +PIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVARC
Sbjct  1    MPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVARC  60

Query  111  TVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWA  170
            TVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWA
Sbjct  61   TVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWA  120

Query  171  GFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGS  230
            GFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE VLDLKDVIHHTDRGS
Sbjct  121  GFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQESVLDLKDVIHHTDRGS  180

Query  231  QYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELAT  290
            QYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELAT
Sbjct  181  QYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELAT  240

Query  291  ARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            ARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG
Sbjct  241  ARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  278


>gi|289759146|ref|ZP_06518524.1| transposase [Mycobacterium tuberculosis T85]
 gi|289714710|gb|EFD78722.1| transposase [Mycobacterium tuberculosis T85]
Length=276

 Score =  565 bits (1457),  Expect = 2e-159, Method: Compositional matrix adjust.
 Identities = 275/276 (99%), Positives = 276/276 (100%), Gaps = 0/276 (0%)

Query  35   LRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  94
            +RWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR
Sbjct  1    MRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  60

Query  95   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  154
            KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA
Sbjct  61   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  120

Query  155  PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  214
            PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE
Sbjct  121  PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  180

Query  215  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  274
            GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI
Sbjct  181  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  240

Query  275  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVP  310
            KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVP
Sbjct  241  KPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVP  276


>gi|289570120|ref|ZP_06450347.1| transposase [Mycobacterium tuberculosis T17]
 gi|289543874|gb|EFD47522.1| transposase [Mycobacterium tuberculosis T17]
Length=292

 Score =  556 bits (1432),  Expect = 2e-156, Method: Compositional matrix adjust.
 Identities = 273/279 (98%), Positives = 273/279 (98%), Gaps = 0/279 (0%)

Query  50   GVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVAR  109
            G    P  YYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVAR
Sbjct  14   GCADRPIDYYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVAR  73

Query  110  CTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTW  169
            CTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTW
Sbjct  74   CTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTW  133

Query  170  AGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRG  229
            AGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRG
Sbjct  134  AGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRG  193

Query  230  SQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELA  289
            SQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELA
Sbjct  194  SQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELA  253

Query  290  TARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            TARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG
Sbjct  254  TARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  292


>gi|326903628|gb|EGE50561.1| integrase [Mycobacterium tuberculosis W-148]
Length=258

 Score =  526 bits (1356),  Expect = 1e-147, Method: Compositional matrix adjust.
 Identities = 257/258 (99%), Positives = 258/258 (100%), Gaps = 0/258 (0%)

Query  71   LRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKAR  130
            +RDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKAR
Sbjct  1    MRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKAR  60

Query  131  RTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWR  190
            RTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWR
Sbjct  61   RTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWR  120

Query  191  VASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSV  250
            VASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSV
Sbjct  121  VASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSV  180

Query  251  GAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVP  310
            GAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVP
Sbjct  181  GAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVP  240

Query  311  PVELEAAYYAQRQRPAAG  328
            PVELEAAYYAQRQRPAAG
Sbjct  241  PVELEAAYYAQRQRPAAG  258


>gi|340627301|ref|YP_004745753.1| putative transposase for insertion sequence element IS986/IS6110 
[Mycobacterium canettii CIPT 140010059]
 gi|340005491|emb|CCC44651.1| putative transposase for insertion sequence element IS986/IS6110 
[Mycobacterium canettii CIPT 140010059]
Length=255

 Score =  512 bits (1318),  Expect = 3e-143, Method: Compositional matrix adjust.
 Identities = 250/252 (99%), Positives = 250/252 (99%), Gaps = 0/252 (0%)

Query  77   KEHISRVHAANYGVYGARKVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIAD  136
              HISRVHAANYGVYGARKVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIAD
Sbjct  4    SSHISRVHAANYGVYGARKVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIAD  63

Query  137  PATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMA  196
            PATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMA
Sbjct  64   PATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMA  123

Query  197  TSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSS  256
            TSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSS
Sbjct  124  TSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSS  183

Query  257  YDNALAETINGLYKTELIKPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEA  316
            YDNALAETINGLYKTELIKPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEA
Sbjct  184  YDNALAETINGLYKTELIKPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEA  243

Query  317  AYYAQRQRPAAG  328
            AYYAQRQRPAAG
Sbjct  244  AYYAQRQRPAAG  255


>gi|340628312|ref|YP_004746764.1| is6110, transposase [Mycobacterium canettii CIPT 140010059]
 gi|340006502|emb|CCC45685.1| is6110, transposase [Mycobacterium canettii CIPT 140010059]
Length=430

 Score =  504 bits (1298),  Expect = 7e-141, Method: Compositional matrix adjust.
 Identities = 247/248 (99%), Positives = 248/248 (100%), Gaps = 0/248 (0%)

Query  35   LRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  94
            +RWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR
Sbjct  1    MRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGAR  60

Query  95   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  154
            KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA
Sbjct  61   KVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPA  120

Query  155  PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  214
            PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE
Sbjct  121  PNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQE  180

Query  215  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  274
            GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI
Sbjct  181  GVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELI  240

Query  275  KPGKPWRS  282
            KPGKPWRS
Sbjct  241  KPGKPWRS  248


>gi|126434808|ref|YP_001070499.1| integrase catalytic subunit [Mycobacterium sp. JLS]
 gi|126234608|gb|ABN98008.1| Integrase, catalytic region [Mycobacterium sp. JLS]
Length=278

 Score =  493 bits (1268),  Expect = 2e-137, Method: Compositional matrix adjust.
 Identities = 238/275 (87%), Positives = 251/275 (92%), Gaps = 0/275 (0%)

Query  53   IAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVARCTV  112
            IAPSTYY+H+ REPSRRE+RD  LK  + RVH ANYGVYGARKVWL LNREGIEVARCTV
Sbjct  3    IAPSTYYEHLEREPSRREVRDEALKADVHRVHGANYGVYGARKVWLALNREGIEVARCTV  62

Query  113  ERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGF  172
            ERLM +LGL G  RGKA  TTIADP   RPADLV RRFGP APNRLWVADLTYVSTW+GF
Sbjct  63   ERLMAELGLRGAVRGKATTTTIADPGAVRPADLVGRRFGPVAPNRLWVADLTYVSTWSGF  122

Query  173  AYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQY  232
            AYVAFVTDAYARRILGWRVASTMAT+MVLD+IEQAIWTRQ EG +DLKDV+HHTDRGSQY
Sbjct  123  AYVAFVTDAYARRILGWRVASTMATTMVLDSIEQAIWTRQGEGEVDLKDVVHHTDRGSQY  182

Query  233  TSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELATAR  292
            TSIRF+ERLAEA IQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWR+IEDVELATAR
Sbjct  183  TSIRFTERLAEARIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRTIEDVELATAR  242

Query  293  WVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAA  327
            WVDWFNHRRLY+YCGDVPP ELEAAYYAQR RPAA
Sbjct  243  WVDWFNHRRLYEYCGDVPPAELEAAYYAQRSRPAA  277


>gi|289761914|ref|ZP_06521292.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289709420|gb|EFD73436.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
Length=233

 Score =  475 bits (1223),  Expect = 4e-132, Method: Compositional matrix adjust.
 Identities = 232/233 (99%), Positives = 233/233 (100%), Gaps = 0/233 (0%)

Query  96   VWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAP  155
            +WLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAP
Sbjct  1    MWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAP  60

Query  156  NRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEG  215
            NRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEG
Sbjct  61   NRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEG  120

Query  216  VLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIK  275
            VLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIK
Sbjct  121  VLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIK  180

Query  276  PGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            PGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG
Sbjct  181  PGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  233


>gi|339299467|gb|AEJ51577.1| transposase IS6110 [Mycobacterium tuberculosis CCDC5180]
Length=232

 Score =  468 bits (1205),  Expect = 5e-130, Method: Compositional matrix adjust.
 Identities = 229/230 (99%), Positives = 229/230 (99%), Gaps = 0/230 (0%)

Query  99   TLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRL  158
             LNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRL
Sbjct  3    NLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRL  62

Query  159  WVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLD  218
            WVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLD
Sbjct  63   WVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLD  122

Query  219  LKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGK  278
            LKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGK
Sbjct  123  LKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGK  182

Query  279  PWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            PWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG
Sbjct  183  PWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  232


>gi|326902443|gb|EGE49376.1| transposase [Mycobacterium tuberculosis W-148]
Length=222

 Score =  453 bits (1165),  Expect = 2e-125, Method: Compositional matrix adjust.
 Identities = 221/222 (99%), Positives = 222/222 (100%), Gaps = 0/222 (0%)

Query  107  VARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYV  166
            +ARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYV
Sbjct  1    MARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYV  60

Query  167  STWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHT  226
            STWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHT
Sbjct  61   STWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHT  120

Query  227  DRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDV  286
            DRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDV
Sbjct  121  DRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDV  180

Query  287  ELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            ELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG
Sbjct  181  ELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  222


>gi|298525252|ref|ZP_07012661.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|298495046|gb|EFI30340.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=214

 Score =  437 bits (1124),  Expect = 1e-120, Method: Compositional matrix adjust.
 Identities = 213/214 (99%), Positives = 214/214 (100%), Gaps = 0/214 (0%)

Query  115  LMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAY  174
            +MTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAY
Sbjct  1    MMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAY  60

Query  175  VAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTS  234
            VAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTS
Sbjct  61   VAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTS  120

Query  235  IRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELATARWV  294
            IRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELATARWV
Sbjct  121  IRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELATARWV  180

Query  295  DWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            DWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG
Sbjct  181  DWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  214


>gi|289758224|ref|ZP_06517602.1| transposase [Mycobacterium tuberculosis T85]
 gi|289713788|gb|EFD77800.1| transposase [Mycobacterium tuberculosis T85]
 gi|326905760|gb|EGE52693.1| integrase [Mycobacterium tuberculosis W-148]
Length=213

 Score =  436 bits (1120),  Expect = 3e-120, Method: Compositional matrix adjust.
 Identities = 213/213 (100%), Positives = 213/213 (100%), Gaps = 0/213 (0%)

Query  116  MTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYV  175
            MTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYV
Sbjct  1    MTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYV  60

Query  176  AFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSI  235
            AFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSI
Sbjct  61   AFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSI  120

Query  236  RFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELATARWVD  295
            RFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELATARWVD
Sbjct  121  RFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELATARWVD  180

Query  296  WFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            WFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG
Sbjct  181  WFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  213


>gi|289761475|ref|ZP_06520853.1| transposase [Mycobacterium tuberculosis GM 1503]
 gi|289708981|gb|EFD72997.1| transposase [Mycobacterium tuberculosis GM 1503]
Length=196

 Score =  401 bits (1031),  Expect = 6e-110, Method: Compositional matrix adjust.
 Identities = 195/196 (99%), Positives = 195/196 (99%), Gaps = 0/196 (0%)

Query  133  TIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVA  192
            TIADP TARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVA
Sbjct  1    TIADPTTARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVA  60

Query  193  STMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGA  252
            STMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGA
Sbjct  61   STMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGA  120

Query  253  VGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPV  312
            VGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPV
Sbjct  121  VGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPV  180

Query  313  ELEAAYYAQRQRPAAG  328
            ELEAAYYAQRQRPAAG
Sbjct  181  ELEAAYYAQRQRPAAG  196


>gi|258652726|ref|YP_003201882.1| Integrase catalytic subunit [Nakamurella multipartita DSM 44233]
 gi|258653641|ref|YP_003202797.1| Integrase catalytic subunit [Nakamurella multipartita DSM 44233]
 gi|258653758|ref|YP_003202914.1| Integrase catalytic subunit [Nakamurella multipartita DSM 44233]
 gi|258555951|gb|ACV78893.1| Integrase catalytic region [Nakamurella multipartita DSM 44233]
 gi|258556866|gb|ACV79808.1| Integrase catalytic region [Nakamurella multipartita DSM 44233]
 gi|258556983|gb|ACV79925.1| Integrase catalytic region [Nakamurella multipartita DSM 44233]
Length=301

 Score =  396 bits (1018),  Expect = 2e-108, Method: Compositional matrix adjust.
 Identities = 199/299 (67%), Positives = 232/299 (78%), Gaps = 6/299 (2%)

Query  35   LRWGVESICTQLTE-LGVPIAPSTYYDHINREPSRR--ELRDGELKEHISRVHAAN-YGV  90
            +RWGVE IC  L+E LG+ IAPSTYY+H  R    R   +RD  L E I RVH  N +G 
Sbjct  1    MRWGVEPICKVLSEHLGLRIAPSTYYEHAARPAQTRPAAVRDAALLEQIRRVHTENNHGT  60

Query  91   YGARKVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRF  150
            YGARKVWL LNREG+ VARCTVERLM   GL G  RGK +RTT+ADP   RPADLVQRRF
Sbjct  61   YGARKVWLQLNREGVSVARCTVERLMRSAGLVGVRRGKIKRTTVADPGAQRPADLVQRRF  120

Query  151  GPPAPNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWT  210
            G   P+RLWVAD+TYVSTW+G+ YVA VTDAYARRILGWRVA+TM T +VLDA+EQAIWT
Sbjct  121  GALVPDRLWVADITYVSTWSGWVYVALVTDAYARRILGWRVATTMTTQLVLDALEQAIWT  180

Query  211  RQQEGVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYK  270
            RQ+     ++ V+ H+DRGSQYTSIR+SERLAE GI  SVG+VG SYDNALAETINGLYK
Sbjct  181  RQRAD-RTVEHVVAHSDRGSQYTSIRYSERLAEVGIAASVGSVGDSYDNALAETINGLYK  239

Query  271  TELIKPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYA-QRQRPAAG  328
             E+I+   PWRSI+ VE ATA W+DW+NHRRL++YCGD+PP ELE A+YA  R +  AG
Sbjct  240  AEVIRHRGPWRSIDSVEFATAEWIDWYNHRRLHEYCGDIPPAELEDAFYAHHRAQQTAG  298


>gi|254233938|ref|ZP_04927263.1| hypothetical protein TBCG_03270 [Mycobacterium tuberculosis C]
 gi|124599467|gb|EAY58571.1| hypothetical protein TBCG_03270 [Mycobacterium tuberculosis C]
Length=194

 Score =  390 bits (1002),  Expect = 1e-106, Method: Compositional matrix adjust.
 Identities = 189/191 (99%), Positives = 190/191 (99%), Gaps = 0/191 (0%)

Query  138  ATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMAT  197
            +TARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMAT
Sbjct  4    STARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMAT  63

Query  198  SMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSY  257
            SMVLDAIEQAIWTRQQE VLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSY
Sbjct  64   SMVLDAIEQAIWTRQQESVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSY  123

Query  258  DNALAETINGLYKTELIKPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAA  317
            DNALAETINGLYKTELIKPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAA
Sbjct  124  DNALAETINGLYKTELIKPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAA  183

Query  318  YYAQRQRPAAG  328
            YYAQRQRPAAG
Sbjct  184  YYAQRQRPAAG  194


>gi|166836367|gb|ABY90415.1| TnpA [Mycobacterium smegmatis]
Length=288

 Score =  385 bits (988),  Expect = 6e-105, Method: Compositional matrix adjust.
 Identities = 181/267 (68%), Positives = 212/267 (80%), Gaps = 2/267 (0%)

Query  55   PSTYYDHINR--EPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVARCTV  112
            P TYYD   R  +PS+R++R+ ELK  I+RVH  NY VYGARKVWL   REG+EVARCTV
Sbjct  8    PHTYYDACARRSQPSKRQVREEELKVEIARVHRENYAVYGARKVWLQCRREGVEVARCTV  67

Query  113  ERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGF  172
            ERLM +LGL G  RGK +RTTIADP  ARP DLV R F P APN LWVAD TYVSTW+G+
Sbjct  68   ERLMAELGLHGARRGKVKRTTIADPQAARPDDLVGRHFSPNAPNMLWVADFTYVSTWSGW  127

Query  173  AYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQY  232
             YVAFV DAYARRI+GWR A+TM + +V+DAIE AIWTR ++G+ DL  +IHH DRGSQY
Sbjct  128  VYVAFVIDAYARRIVGWRTATTMTSQLVVDAIEHAIWTRGRDGITDLTGLIHHNDRGSQY  187

Query  233  TSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELATAR  292
            TSI F++RL EAGI  S+GA G+SYDNALAETINGLYKTELIK   PWR+++ VE+AT  
Sbjct  188  TSIAFTDRLLEAGIDASIGATGNSYDNALAETINGLYKTELIKAQGPWRTVDQVEVATLE  247

Query  293  WVDWFNHRRLYQYCGDVPPVELEAAYY  319
            WVDWFNHRR+Y+YCGD+PP E E  YY
Sbjct  248  WVDWFNHRRIYEYCGDMPPAECEGLYY  274


>gi|163839898|ref|YP_001624303.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|162953374|gb|ABY22889.1| OrfB [Renibacterium salmoninarum ATCC 33209]
Length=296

 Score =  384 bits (987),  Expect = 8e-105, Method: Compositional matrix adjust.
 Identities = 181/279 (65%), Positives = 220/279 (79%), Gaps = 1/279 (0%)

Query  50   GVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVAR  109
            GV  APSTYY+ +++  S RE RD  LK  I +V+AANYGVYG RKVWL +NREG+ VAR
Sbjct  14   GVKTAPSTYYEWVDKTRSHREQRDEVLKPVIQKVYAANYGVYGTRKVWLAMNREGVPVAR  73

Query  110  CTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTW  169
            CTVERLM  LG+ G  RGK +RTTI D   AR  DLV+R F P AP+RLWVAD TYVSTW
Sbjct  74   CTVERLMGLLGIQGAVRGKVKRTTIKDSKAARAKDLVRRDFTPTAPDRLWVADFTYVSTW  133

Query  170  AGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRG  229
            +G+ YVAFV DAY+RRILGW  +++M T +VL+A+ QAIW+R++ G  ++  VIHH D G
Sbjct  134  SGWVYVAFVIDAYSRRILGWSASASMNTVLVLNAVNQAIWSRERAGA-EISGVIHHHDAG  192

Query  230  SQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELA  289
            +QY S+ F+ERLA+AGI+PS+G+VG SYDN LAETINGLYKTELIKPGKPWR++E+VE+ 
Sbjct  193  AQYASLAFTERLAQAGIRPSIGSVGDSYDNVLAETINGLYKTELIKPGKPWRTLEEVEIG  252

Query  290  TARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            TA WVDW+NHRRLYQYCGD+PPVELE  YY   Q  AA 
Sbjct  253  TAEWVDWYNHRRLYQYCGDIPPVELENHYYNHYQSTAAA  291


>gi|163840515|ref|YP_001624920.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|162953991|gb|ABY23506.1| OrfB [Renibacterium salmoninarum ATCC 33209]
Length=296

 Score =  384 bits (985),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 181/279 (65%), Positives = 220/279 (79%), Gaps = 1/279 (0%)

Query  50   GVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVAR  109
            GV  APSTYY+ +++  S RE RD  LK  I +V+AANYGVYG RKVWL +NREG+ VAR
Sbjct  14   GVKTAPSTYYEWVDKTRSHREQRDEVLKPVIQKVYAANYGVYGTRKVWLAMNREGVPVAR  73

Query  110  CTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTW  169
            CTVERLM  LG+ G  RGK +RTTI D   AR  DLV+R F P AP+RLWV D TYVSTW
Sbjct  74   CTVERLMGLLGIQGAVRGKVKRTTIKDSKAARAKDLVRRDFTPTAPDRLWVDDFTYVSTW  133

Query  170  AGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRG  229
            +G+ YVAFV DAY+RRILGW  +++M T +VL+A+ QAIW+R++ G  ++  VIHH D G
Sbjct  134  SGWVYVAFVIDAYSRRILGWSASASMNTVLVLNAVNQAIWSRERAGA-EISGVIHHHDAG  192

Query  230  SQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELA  289
            +QY S+ F+ERLA+AGI+PS+G+VG SYDNALAETINGLYKTELIKPGKPWR++E+VE+ 
Sbjct  193  AQYASLAFTERLAQAGIRPSIGSVGDSYDNALAETINGLYKTELIKPGKPWRTLEEVEIG  252

Query  290  TARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            TA WVDW+NHRRLYQYCGD+PPVELE  YY   Q  AA 
Sbjct  253  TAEWVDWYNHRRLYQYCGDIPPVELENHYYNHYQSTAAA  291


>gi|163839350|ref|YP_001623755.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|163839387|ref|YP_001623792.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|163841846|ref|YP_001626251.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|162952826|gb|ABY22341.1| OrfB [Renibacterium salmoninarum ATCC 33209]
 gi|162952863|gb|ABY22378.1| OrfB [Renibacterium salmoninarum ATCC 33209]
 gi|162955322|gb|ABY24837.1| OrfB [Renibacterium salmoninarum ATCC 33209]
Length=296

 Score =  383 bits (983),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 180/279 (65%), Positives = 219/279 (79%), Gaps = 1/279 (0%)

Query  50   GVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVAR  109
            GV   PSTYY+ +++  S RE RD  LK  I +V+AANYGVYG RKVWL +NREG+ VAR
Sbjct  14   GVKTTPSTYYEWVDKTRSHREQRDEVLKPVIQKVYAANYGVYGTRKVWLAMNREGVPVAR  73

Query  110  CTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTW  169
            CTVERLM  LG+ G  RGK +RTTI D   AR  DLV+R F P AP+RLWVAD TYVSTW
Sbjct  74   CTVERLMGLLGIQGAVRGKVKRTTIKDSKAARAKDLVRRDFTPTAPDRLWVADFTYVSTW  133

Query  170  AGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRG  229
            +G+ YVAFV DAY+RRILGW  +++M T +VL+A+ QAIW+R++ G  ++  VIHH D G
Sbjct  134  SGWVYVAFVIDAYSRRILGWSASASMNTVLVLNAVNQAIWSRERAGA-EISGVIHHHDAG  192

Query  230  SQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELA  289
            +QY S+ F+ERLA+AGI+PS+G+VG SYDN LAETINGLYKTELIKPGKPWR++E+VE+ 
Sbjct  193  AQYASLAFTERLAQAGIRPSIGSVGDSYDNVLAETINGLYKTELIKPGKPWRTLEEVEIG  252

Query  290  TARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            TA WVDW+NHRRLYQYCGD+PPVELE  YY   Q  AA 
Sbjct  253  TAEWVDWYNHRRLYQYCGDIPPVELENHYYNHYQSTAAA  291


>gi|163839336|ref|YP_001623741.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|162952812|gb|ABY22327.1| OrfB [Renibacterium salmoninarum ATCC 33209]
Length=296

 Score =  382 bits (982),  Expect = 3e-104, Method: Compositional matrix adjust.
 Identities = 180/279 (65%), Positives = 219/279 (79%), Gaps = 1/279 (0%)

Query  50   GVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVAR  109
            GV   PSTYY+ +++  S RE RD  LK  I +V+AANYGVYG RKVWL +NREG+ VAR
Sbjct  14   GVKTTPSTYYEWVDKTRSHREQRDEVLKPVIQKVYAANYGVYGTRKVWLAMNREGVPVAR  73

Query  110  CTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTW  169
            CTVERLM  LG+ G  RGK +RTTI D   AR  DLV+R F P AP+RLWVAD TYVSTW
Sbjct  74   CTVERLMGLLGIQGAVRGKVKRTTIKDSKAARAKDLVRRDFTPTAPDRLWVADFTYVSTW  133

Query  170  AGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRG  229
            +G+ YVAFV DAY+RRILGW  +++M T +VL+A+ QAIW+R++ G  ++  VIHH D G
Sbjct  134  SGWVYVAFVIDAYSRRILGWSASASMNTVLVLNAVNQAIWSRERAGA-EISGVIHHHDAG  192

Query  230  SQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELA  289
            +QY S+ F+ERLA+AGI+PS+G+VG SYDNALAETINGLYKTELIKPGKPWR++E+VE+ 
Sbjct  193  AQYASLAFTERLAQAGIRPSIGSVGDSYDNALAETINGLYKTELIKPGKPWRTLEEVEIG  252

Query  290  TARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            TA W DW+NHRRLYQYCGD+PPVELE  YY   Q  AA 
Sbjct  253  TAEWADWYNHRRLYQYCGDIPPVELENHYYNHYQSTAAA  291


>gi|163841496|ref|YP_001625901.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|162954972|gb|ABY24487.1| OrfB [Renibacterium salmoninarum ATCC 33209]
Length=296

 Score =  382 bits (981),  Expect = 5e-104, Method: Compositional matrix adjust.
 Identities = 180/279 (65%), Positives = 219/279 (79%), Gaps = 1/279 (0%)

Query  50   GVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVAR  109
            GV   PSTYY+ +++  S RE RD  LK  I +V+AANYGVYG RKVWL +NREG+ VAR
Sbjct  14   GVKTTPSTYYEWVDKTRSHREQRDEVLKPVIQKVYAANYGVYGTRKVWLAMNREGVPVAR  73

Query  110  CTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTW  169
            CTVERLM  LG+ G  RGK +RTTI D   AR  DLV+R F P AP+RLWV D TYVSTW
Sbjct  74   CTVERLMGLLGIQGAVRGKVKRTTIKDSKAARAKDLVRRDFTPTAPDRLWVDDFTYVSTW  133

Query  170  AGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRG  229
            +G+ YVAFV DAY+RRILGW  +++M T +VL+A+ QAIW+R++ G  ++  VIHH D G
Sbjct  134  SGWVYVAFVIDAYSRRILGWSASASMNTVLVLNAVNQAIWSRERAGA-EISGVIHHHDAG  192

Query  230  SQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELA  289
            +QY S+ F+ERLA+AGI+PS+G+VG SYDNALAETINGLYKTELIKPGKPWR++E+VE+ 
Sbjct  193  AQYASLAFTERLAQAGIRPSIGSVGDSYDNALAETINGLYKTELIKPGKPWRTLEEVEIG  252

Query  290  TARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            TA WVDW+NHRRLYQYCGD+PPVELE  YY   Q  AA 
Sbjct  253  TAEWVDWYNHRRLYQYCGDIPPVELENHYYNHYQSTAAA  291


>gi|163841333|ref|YP_001625738.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|162954809|gb|ABY24324.1| OrfA [Renibacterium salmoninarum ATCC 33209]
Length=296

 Score =  382 bits (981),  Expect = 5e-104, Method: Compositional matrix adjust.
 Identities = 180/279 (65%), Positives = 219/279 (79%), Gaps = 1/279 (0%)

Query  50   GVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVAR  109
            GV  APSTYY+ +++  S RE RD  LK  I +V+AANYGVYG RKVWL +NREG+ VAR
Sbjct  14   GVKTAPSTYYEWVDKTRSHREQRDEVLKPVIQKVYAANYGVYGTRKVWLAMNREGVPVAR  73

Query  110  CTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTW  169
            CTVERLM  LG+ G  RGK +RTTI D   AR  DLV+R F P AP+RLWV D TYVSTW
Sbjct  74   CTVERLMGLLGIQGAVRGKVKRTTIKDSKAARAKDLVRRDFTPTAPDRLWVDDFTYVSTW  133

Query  170  AGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRG  229
            +G+ YVAFV DAY+RRILGW  +++M T +VL+A+ QAIW+R++ G  ++  VIHH D G
Sbjct  134  SGWVYVAFVIDAYSRRILGWSASASMNTVLVLNAVNQAIWSRERAGA-EISGVIHHHDAG  192

Query  230  SQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELA  289
            +QY S+ F+ERLA+ GI+PS+G+VG SYDNALAETINGLYKTELIKPGKPWR++E+VE+ 
Sbjct  193  AQYASLAFTERLAQTGIRPSIGSVGDSYDNALAETINGLYKTELIKPGKPWRTLEEVEIG  252

Query  290  TARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            TA WVDW+NHRRLYQYCGD+PPVELE  YY   Q  AA 
Sbjct  253  TAEWVDWYNHRRLYQYCGDIPPVELENHYYNHYQSTAAA  291


>gi|163841612|ref|YP_001626017.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|162955088|gb|ABY24603.1| OrfB [Renibacterium salmoninarum ATCC 33209]
Length=296

 Score =  381 bits (979),  Expect = 7e-104, Method: Compositional matrix adjust.
 Identities = 180/279 (65%), Positives = 218/279 (79%), Gaps = 1/279 (0%)

Query  50   GVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVAR  109
            GV   PSTYY+ +++  S RE RD  LK  I +V+AANYGVYG RKVWL +NREG+ VAR
Sbjct  14   GVKTTPSTYYEWVDKTRSHREQRDEVLKPVIQKVYAANYGVYGTRKVWLAMNREGVPVAR  73

Query  110  CTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTW  169
            CTVERLM  LG+ G  RGK +RTTI D   AR  DLV+R F P AP+RLWV D TYVSTW
Sbjct  74   CTVERLMGLLGIQGAVRGKVKRTTIKDSKAARAKDLVRRDFTPTAPDRLWVDDFTYVSTW  133

Query  170  AGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRG  229
            +G+ YVAFV DAY+RRILGW  +++M T +VL+A+ QAIW+R++ G  ++  VIHH D G
Sbjct  134  SGWVYVAFVIDAYSRRILGWSASASMNTVLVLNAVNQAIWSRERAGA-EISGVIHHHDAG  192

Query  230  SQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELA  289
            +QY S+ F+ERLA+AGI+PS+G+VG SYDNALAETINGLYKTELIKPGKPWR+IE+VE+ 
Sbjct  193  AQYASLAFTERLAQAGIRPSIGSVGDSYDNALAETINGLYKTELIKPGKPWRTIEEVEIG  252

Query  290  TARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            TA W DW+NHRRLYQYCGD+PPVELE  YY   Q  AA 
Sbjct  253  TAEWADWYNHRRLYQYCGDIPPVELENHYYNHYQSTAAA  291


>gi|163840941|ref|YP_001625346.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|162954417|gb|ABY23932.1| OrfB [Renibacterium salmoninarum ATCC 33209]
Length=296

 Score =  381 bits (979),  Expect = 8e-104, Method: Compositional matrix adjust.
 Identities = 179/279 (65%), Positives = 219/279 (79%), Gaps = 1/279 (0%)

Query  50   GVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVAR  109
            GV   PSTYY+ +++  S RE RD  LK  I +V+AANYGV+G RKVWL +NREG+ VAR
Sbjct  14   GVKTTPSTYYEWVDKTRSHREQRDEVLKPVIQKVYAANYGVHGTRKVWLAMNREGVPVAR  73

Query  110  CTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTW  169
            CTVERLM  LG+ G  RGK +RTTI D   AR  DLV+R F P AP+RLWVAD TYVSTW
Sbjct  74   CTVERLMGLLGIQGAVRGKVKRTTIKDSKAARAKDLVRRDFTPTAPDRLWVADFTYVSTW  133

Query  170  AGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRG  229
            +G+ YVAFV DAY+RRILGW  +++M T +VL+A+ QAIW+R++ G  ++  VIHH D G
Sbjct  134  SGWVYVAFVIDAYSRRILGWSASASMNTVLVLNAVNQAIWSRERAGA-EISGVIHHHDAG  192

Query  230  SQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELA  289
            +QY S+ F+ERLA+AGI+PS+G+VG SYDN LAETINGLYKTELIKPGKPWR++E+VE+ 
Sbjct  193  AQYASLAFTERLAQAGIRPSIGSVGDSYDNVLAETINGLYKTELIKPGKPWRTLEEVEIG  252

Query  290  TARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            TA WVDW+NHRRLYQYCGD+PPVELE  YY   Q  AA 
Sbjct  253  TAEWVDWYNHRRLYQYCGDIPPVELENHYYNHYQSTAAA  291


>gi|163840656|ref|YP_001625061.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|162954132|gb|ABY23647.1| OrfB [Renibacterium salmoninarum ATCC 33209]
Length=296

 Score =  381 bits (978),  Expect = 9e-104, Method: Compositional matrix adjust.
 Identities = 179/279 (65%), Positives = 218/279 (79%), Gaps = 1/279 (0%)

Query  50   GVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVAR  109
            GV   PSTYY+ +++  S RE RD  LK  I +V+AANYGVYG RKVWL +NREG+ VAR
Sbjct  14   GVKTTPSTYYEWVDKTRSHREQRDEVLKPVIQKVYAANYGVYGTRKVWLAMNREGVPVAR  73

Query  110  CTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTW  169
            CTVERLM  LG+ G  RGK +RTTI D   AR  DLV+R F P AP+RLWVAD TYVSTW
Sbjct  74   CTVERLMGLLGIQGAVRGKVKRTTIKDSKAARAKDLVRRDFTPTAPDRLWVADFTYVSTW  133

Query  170  AGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRG  229
            +G+ YVAFV DAY+RRILGW  +++M T +VL+A+ QAIW+R++ G  ++  VIHH D G
Sbjct  134  SGWVYVAFVIDAYSRRILGWSASASMNTVLVLNAVNQAIWSRERAGA-EISGVIHHHDAG  192

Query  230  SQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELA  289
            +QY S+ F+ERLA+ GI+PS+G+VG SYDNALAETINGLYKTELIKPGKPWR++E+VE+ 
Sbjct  193  AQYASLAFTERLAQTGIRPSIGSVGDSYDNALAETINGLYKTELIKPGKPWRTLEEVEIG  252

Query  290  TARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            TA W DW+NHRRLYQYCGD+PPVELE  YY   Q  AA 
Sbjct  253  TAEWADWYNHRRLYQYCGDIPPVELENHYYNHYQSTAAA  291


>gi|163840353|ref|YP_001624758.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|163840877|ref|YP_001625282.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|163841202|ref|YP_001625607.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|162953829|gb|ABY23344.1| OrfB [Renibacterium salmoninarum ATCC 33209]
 gi|162954353|gb|ABY23868.1| OrfB [Renibacterium salmoninarum ATCC 33209]
 gi|162954678|gb|ABY24193.1| OrfB [Renibacterium salmoninarum ATCC 33209]
Length=296

 Score =  381 bits (978),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 179/279 (65%), Positives = 218/279 (79%), Gaps = 1/279 (0%)

Query  50   GVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVAR  109
            GV   PSTYY+ +++  S RE RD  LK  I +V+AANYGVYG RKVWL +NREG+ VAR
Sbjct  14   GVKTTPSTYYEWVDKTRSHREQRDEVLKPVIQKVYAANYGVYGTRKVWLAMNREGVPVAR  73

Query  110  CTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTW  169
            CTVERLM  LG+ G  RGK +RTTI D   AR  DLV+R F P AP+RLWV D TYVSTW
Sbjct  74   CTVERLMGLLGIQGAVRGKVKRTTIKDSKAARAKDLVRRDFTPTAPDRLWVDDFTYVSTW  133

Query  170  AGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRG  229
            +G+ YVAFV DAY+RRILGW  +++M T +VL+A+ QAIW+R++ G  ++  VIHH D G
Sbjct  134  SGWVYVAFVIDAYSRRILGWSASASMNTVLVLNAVNQAIWSRERAGA-EISGVIHHHDAG  192

Query  230  SQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELA  289
            +QY S+ F+ERLA+AGI+PS+G+VG SYDN LAETINGLYKTELIKPGKPWR++E+VE+ 
Sbjct  193  AQYASLAFTERLAQAGIRPSIGSVGDSYDNVLAETINGLYKTELIKPGKPWRTLEEVEIG  252

Query  290  TARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            TA WVDW+NHRRLYQYCGD+PPVELE  YY   Q  AA 
Sbjct  253  TAEWVDWYNHRRLYQYCGDIPPVELENHYYNHYQSTAAA  291


>gi|163841184|ref|YP_001625589.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|163842116|ref|YP_001626521.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|162954660|gb|ABY24175.1| OrfB [Renibacterium salmoninarum ATCC 33209]
 gi|162955592|gb|ABY25107.1| OrfB [Renibacterium salmoninarum ATCC 33209]
Length=296

 Score =  381 bits (978),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 179/279 (65%), Positives = 218/279 (79%), Gaps = 1/279 (0%)

Query  50   GVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVAR  109
            GV   PSTYY+ +++  S RE RD  LK  I +V+AANYGVYG RKVWL +NREG+ VAR
Sbjct  14   GVKTTPSTYYEWVDKTRSHREQRDEVLKPVIQKVYAANYGVYGTRKVWLAMNREGVPVAR  73

Query  110  CTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTW  169
            CTVERLM  LG+ G  RGK +RTTI D   AR  DLV+R F P AP+RLWVAD TYVSTW
Sbjct  74   CTVERLMGLLGIQGAVRGKVKRTTIKDSKAARAKDLVRRDFTPTAPDRLWVADFTYVSTW  133

Query  170  AGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRG  229
            +G+ YVAFV DAY+RRILGW  +++M T +VL+A+ QAIW+R++ G  ++  VIHH D G
Sbjct  134  SGWVYVAFVIDAYSRRILGWSASASMNTVLVLNAVNQAIWSRERAGA-EISGVIHHHDAG  192

Query  230  SQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELA  289
            +QY S+ F+ERLA+AGI+PS+G+VG SYDN LAETINGLYKTELIKPGKPWR++E+VE+ 
Sbjct  193  AQYASLAFTERLAQAGIRPSIGSVGDSYDNVLAETINGLYKTELIKPGKPWRTLEEVEIG  252

Query  290  TARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            TA W DW+NHRRLYQYCGD+PPVELE  YY   Q  AA 
Sbjct  253  TAEWADWYNHRRLYQYCGDIPPVELENHYYNHYQSTAAA  291


>gi|163839133|ref|YP_001623538.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|163839373|ref|YP_001623778.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|163839733|ref|YP_001624138.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|162952609|gb|ABY22124.1| OrfB [Renibacterium salmoninarum ATCC 33209]
 gi|162952849|gb|ABY22364.1| OrfB [Renibacterium salmoninarum ATCC 33209]
 gi|162953209|gb|ABY22724.1| OrfB [Renibacterium salmoninarum ATCC 33209]
Length=296

 Score =  380 bits (977),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 179/279 (65%), Positives = 219/279 (79%), Gaps = 1/279 (0%)

Query  50   GVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVAR  109
            GV   PSTYY+ +++  S RE RD  LK  I +V+AANYGV+G RKVWL +NREG+ VAR
Sbjct  14   GVKTTPSTYYEWVDKTRSHREQRDEVLKPVIQKVYAANYGVHGTRKVWLAMNREGVPVAR  73

Query  110  CTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTW  169
            CTVERLM  LG+ G  RGK +RTTI D   AR  DLV+R F P AP+RLWVAD TYVSTW
Sbjct  74   CTVERLMGLLGIQGAVRGKVKRTTIKDSKAARAKDLVRRDFTPTAPDRLWVADFTYVSTW  133

Query  170  AGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRG  229
            +G+ YVAFV DAY+RRILGW  +++M T +VL+A+ QAIW+R++ G  ++  VIHH D G
Sbjct  134  SGWVYVAFVIDAYSRRILGWSASASMNTVLVLNAVNQAIWSRERAGA-EISGVIHHHDAG  192

Query  230  SQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELA  289
            +QY S+ F+ERLA+AGI+PS+G+VG SYDNALAETINGLYKTELIKPGKPWR++E+VE+ 
Sbjct  193  AQYASLAFTERLAQAGIRPSIGSVGDSYDNALAETINGLYKTELIKPGKPWRTLEEVEIG  252

Query  290  TARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            TA W DW+NHRRLYQYCGD+PPVELE  YY   Q  AA 
Sbjct  253  TAEWADWYNHRRLYQYCGDIPPVELENHYYNHYQSTAAA  291


>gi|163840017|ref|YP_001624422.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|162953493|gb|ABY23008.1| OrfB [Renibacterium salmoninarum ATCC 33209]
Length=296

 Score =  380 bits (977),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 179/279 (65%), Positives = 218/279 (79%), Gaps = 1/279 (0%)

Query  50   GVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVAR  109
            GV   PSTYY+ +++  S RE RD  LK  I +V+AANYGVYG RKVWL +NREG+ VAR
Sbjct  14   GVKTTPSTYYEWVDKTRSHREQRDEVLKPVIQKVYAANYGVYGTRKVWLAMNREGVPVAR  73

Query  110  CTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTW  169
            CTVERLM  LG+ G  RGK +RTTI D   AR  DLV+R F P AP+RLWV D TYVSTW
Sbjct  74   CTVERLMGLLGIQGAVRGKVKRTTIKDSKAARAKDLVRRDFTPTAPDRLWVDDFTYVSTW  133

Query  170  AGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRG  229
            +G+ YVAFV DAY+RRILGW  +++M T +VL+A+ QAIW+R++ G  ++  VIHH D G
Sbjct  134  SGWVYVAFVIDAYSRRILGWSASASMNTVLVLNAVNQAIWSRERAGA-EISGVIHHHDAG  192

Query  230  SQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELA  289
            +QY S+ F+ERLA+ GI+PS+G+VG SYDNALAETINGLYKTELIKPGKPWR++E+VE+ 
Sbjct  193  AQYASLAFTERLAQTGIRPSIGSVGDSYDNALAETINGLYKTELIKPGKPWRTLEEVEIG  252

Query  290  TARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            TA WVDW+NHRRLYQYCGD+PPVELE  YY   Q  AA 
Sbjct  253  TAEWVDWYNHRRLYQYCGDIPPVELENHYYNHYQSTAAA  291


>gi|163839700|ref|YP_001624105.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|163840041|ref|YP_001624446.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|163840855|ref|YP_001625260.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 13 more sequence titles
 Length=296

 Score =  380 bits (977),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 179/279 (65%), Positives = 218/279 (79%), Gaps = 1/279 (0%)

Query  50   GVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVAR  109
            GV   PSTYY+ +++  S RE RD  LK  I +V+AANYGVYG RKVWL +NREG+ VAR
Sbjct  14   GVKTTPSTYYEWVDKTRSHREQRDEVLKPVIQKVYAANYGVYGTRKVWLAMNREGVPVAR  73

Query  110  CTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTW  169
            CTVERLM  LG+ G  RGK +RTTI D   AR  DLV+R F P AP+RLWV D TYVSTW
Sbjct  74   CTVERLMGLLGIQGAVRGKVKRTTIKDSKAARAKDLVRRDFTPTAPDRLWVDDFTYVSTW  133

Query  170  AGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRG  229
            +G+ YVAFV DAY+RRILGW  +++M T +VL+A+ QAIW+R++ G  ++  VIHH D G
Sbjct  134  SGWVYVAFVIDAYSRRILGWSASASMNTVLVLNAVNQAIWSRERAGA-EISGVIHHHDAG  192

Query  230  SQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELA  289
            +QY S+ F+ERLA+AGI+PS+G+VG SYDNALAETINGLYKTELIKPGKPWR++E+VE+ 
Sbjct  193  AQYASLAFTERLAQAGIRPSIGSVGDSYDNALAETINGLYKTELIKPGKPWRTLEEVEIG  252

Query  290  TARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG  328
            TA W DW+NHRRLYQYCGD+PPVELE  YY   Q  AA 
Sbjct  253  TAEWADWYNHRRLYQYCGDIPPVELENHYYNHYQSTAAA  291



Lambda     K      H
   0.320    0.135    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 580492275184


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40