BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2480c

Length=108
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|289750277|ref|ZP_06509655.1|  transposase [Mycobacterium tuber...   215    1e-54
gi|15607935|ref|NP_215310.1|  transposase IS6110 [Mycobacterium t...   215    2e-54
gi|294996954|ref|ZP_06802645.1|  transposase [Mycobacterium tuber...   213    6e-54
gi|339294737|gb|AEJ46848.1|  transposase [Mycobacterium tuberculo...   212    1e-53
gi|306809326|ref|ZP_07445994.1|  transposase [Mycobacterium tuber...   212    2e-53
gi|289758223|ref|ZP_06517601.1|  transposase [Mycobacterium tuber...   212    2e-53
gi|289760519|ref|ZP_06519897.1|  transposase [Mycobacterium tuber...   211    2e-53
gi|306776179|ref|ZP_07414516.1|  transposase [Mycobacterium tuber...   209    1e-52
gi|308374441|ref|ZP_07436061.2|  transposase [Mycobacterium tuber...   208    3e-52
gi|308371506|ref|ZP_07425169.2|  transposase [Mycobacterium tuber...   205    2e-51
gi|308406122|ref|ZP_07495202.2|  transposase [Mycobacterium tuber...   200    6e-50
gi|308371762|ref|ZP_07426151.2|  transposase [Mycobacterium tuber...   192    1e-47
gi|308370082|ref|ZP_07420236.2|  transposase [Mycobacterium tuber...   191    3e-47
gi|308232364|ref|ZP_07415839.2|  transposase [Mycobacterium tuber...   188    3e-46
gi|308375301|ref|ZP_07443478.2|  transposase [Mycobacterium tuber...   187    3e-46
gi|296165475|ref|ZP_06848008.1|  transposase IS6110 [Mycobacteriu...   183    8e-45
gi|308377136|ref|ZP_07441247.2|  transposase [Mycobacterium tuber...   182    2e-44
gi|254363366|ref|ZP_04979412.1|  hypothetical protein TBHG_00398 ...   179    1e-43
gi|308374097|ref|ZP_07434865.2|  transposase [Mycobacterium tuber...   178    2e-43
gi|308369294|ref|ZP_07417232.2|  transposase [Mycobacterium tuber...   177    5e-43
gi|308373994|ref|ZP_07434444.2|  transposase [Mycobacterium tuber...   171    4e-41
gi|308378918|ref|ZP_07484322.2|  transposase [Mycobacterium tuber...   169    1e-40
gi|258652727|ref|YP_003201883.1|  transposase IS3/IS911 family pr...   168    2e-40
gi|306972288|ref|ZP_07484949.1|  hypothetical protein TMJG_00196 ...   166    1e-39
gi|126434809|ref|YP_001070500.1|  transposase IS3/IS911 family pr...   155    1e-36
gi|298525257|ref|ZP_07012666.1|  conserved hypothetical protein [...   155    2e-36
gi|308377789|ref|ZP_07480423.2|  hypothetical protein TMIG_01918 ...   152    2e-35
gi|258651477|ref|YP_003200633.1|  transposase IS3/IS911 family pr...   150    5e-35
gi|290963355|ref|YP_003494537.1|  IS transposase [Streptomyces sc...   149    1e-34
gi|163839374|ref|YP_001623779.1|  IS994 [Renibacterium salmoninar...   148    2e-34
gi|163840115|ref|YP_001624520.1|  IS994 [Renibacterium salmoninar...   148    3e-34
gi|118468019|ref|YP_885130.1|  IS1137, transposase orfA [Mycobact...   147    5e-34
gi|163839731|ref|YP_001624136.1|  IS994 [Renibacterium salmoninar...   147    5e-34
gi|163840940|ref|YP_001625345.1|  IS994 [Renibacterium salmoninar...   147    6e-34
gi|163839701|ref|YP_001624106.1|  IS994 [Renibacterium salmoninar...   147    6e-34
gi|163839421|ref|YP_001623826.1|  IS994 [Renibacterium salmoninar...   147    6e-34
gi|167967011|ref|ZP_02549288.1|  transposase [Mycobacterium tuber...   147    7e-34
gi|308380056|ref|ZP_07488542.2|  transposase [Mycobacterium tuber...   147    8e-34
gi|163840540|ref|YP_001624945.1|  IS994 [Renibacterium salmoninar...   146    1e-33
gi|163840486|ref|YP_001624891.1|  IS994 [Renibacterium salmoninar...   146    1e-33
gi|163840374|ref|YP_001624779.1|  IS994 [Renibacterium salmoninar...   146    1e-33
gi|163838954|ref|YP_001623359.1|  IS994 [Renibacterium salmoninar...   145    2e-33
gi|163839897|ref|YP_001624302.1|  IS994 [Renibacterium salmoninar...   145    2e-33
gi|284989768|ref|YP_003408322.1|  transposase IS3/IS911 family pr...   145    3e-33
gi|163840457|ref|YP_001624862.1|  IS994 [Renibacterium salmoninar...   144    3e-33
gi|163840578|ref|YP_001624983.1|  IS994 [Renibacterium salmoninar...   144    3e-33
gi|145226038|ref|YP_001136692.1|  transposase IS3/IS911 family pr...   144    3e-33
gi|163842192|ref|YP_001626597.1|  IS994 [Renibacterium salmoninar...   144    4e-33
gi|163839868|ref|YP_001624273.1|  IS994 [Renibacterium salmoninar...   144    4e-33
gi|108802561|ref|YP_642757.1|  transposase IS3/IS911 [Mycobacteri...   144    6e-33


>gi|289750277|ref|ZP_06509655.1| transposase [Mycobacterium tuberculosis T92]
 gi|289690864|gb|EFD58293.1| transposase [Mycobacterium tuberculosis T92]
Length=120

 Score =  215 bits (548),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 108/108 (100%), Positives = 108/108 (100%), Gaps = 0/108 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD
Sbjct  13   MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  72

Query  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRPAR  108
            AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRPAR
Sbjct  73   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRPAR  120


>gi|15607935|ref|NP_215310.1| transposase IS6110 [Mycobacterium tuberculosis H37Rv]
 gi|15608510|ref|NP_215886.1| transposase [Mycobacterium tuberculosis H37Rv]
 gi|15608895|ref|NP_216273.1| putative transposase [Mycobacterium tuberculosis H37Rv]
 760 more sequence titles
 Length=108

 Score =  215 bits (547),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 108/108 (100%), Positives = 108/108 (100%), Gaps = 0/108 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD
Sbjct  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60

Query  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRPAR  108
            AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRPAR
Sbjct  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRPAR  108


>gi|294996954|ref|ZP_06802645.1| transposase [Mycobacterium tuberculosis 210]
Length=108

 Score =  213 bits (543),  Expect = 6e-54, Method: Compositional matrix adjust.
 Identities = 107/108 (99%), Positives = 108/108 (100%), Gaps = 0/108 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            MSGGSSRRYPP+LRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD
Sbjct  1    MSGGSSRRYPPKLRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60

Query  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRPAR  108
            AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRPAR
Sbjct  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRPAR  108


>gi|339294737|gb|AEJ46848.1| transposase [Mycobacterium tuberculosis CCDC5079]
Length=306

 Score =  212 bits (540),  Expect = 1e-53, Method: Compositional matrix adjust.
 Identities = 107/108 (99%), Positives = 108/108 (100%), Gaps = 0/108 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD
Sbjct  199  MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  258

Query  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRPAR  108
            AGARPGTTTEESAELKRLRRD+AELRRANAILKTASAFFAAELDRPAR
Sbjct  259  AGARPGTTTEESAELKRLRRDDAELRRANAILKTASAFFAAELDRPAR  306


 Score =  154 bits (388),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 76/76 (100%), Positives = 76/76 (100%), Gaps = 0/76 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD
Sbjct  105  MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  164

Query  61   AGARPGTTTEESAELK  76
            AGARPGTTTEESAELK
Sbjct  165  AGARPGTTTEESAELK  180


 Score =  145 bits (366),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 72/72 (100%), Positives = 72/72 (100%), Gaps = 0/72 (0%)

Query  5   SSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGAR  64
           SSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGAR
Sbjct  15  SSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGAR  74

Query  65  PGTTTEESAELK  76
           PGTTTEESAELK
Sbjct  75  PGTTTEESAELK  86


>gi|306809326|ref|ZP_07445994.1| transposase [Mycobacterium tuberculosis SUMu007]
 gi|307078752|ref|ZP_07487922.1| transposase [Mycobacterium tuberculosis SUMu011]
 gi|308344437|gb|EFP33288.1| transposase [Mycobacterium tuberculosis SUMu007]
 gi|308363379|gb|EFP52230.1| transposase [Mycobacterium tuberculosis SUMu011]
Length=106

 Score =  212 bits (539),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 106/106 (100%), Positives = 106/106 (100%), Gaps = 0/106 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD
Sbjct  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60

Query  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRP  106
            AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRP
Sbjct  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRP  106


>gi|289758223|ref|ZP_06517601.1| transposase [Mycobacterium tuberculosis T85]
 gi|289713787|gb|EFD77799.1| transposase [Mycobacterium tuberculosis T85]
Length=108

 Score =  212 bits (539),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 107/108 (99%), Positives = 107/108 (99%), Gaps = 0/108 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD
Sbjct  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60

Query  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRPAR  108
            AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDR AR
Sbjct  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRAAR  108


>gi|289760519|ref|ZP_06519897.1| transposase [Mycobacterium tuberculosis GM 1503]
 gi|289708025|gb|EFD72041.1| transposase [Mycobacterium tuberculosis GM 1503]
Length=108

 Score =  211 bits (538),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 107/108 (99%), Positives = 107/108 (99%), Gaps = 0/108 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD
Sbjct  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60

Query  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRPAR  108
            AGA PGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRPAR
Sbjct  61   AGAWPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRPAR  108


>gi|306776179|ref|ZP_07414516.1| transposase [Mycobacterium tuberculosis SUMu001]
 gi|306968028|ref|ZP_07480689.1| transposase [Mycobacterium tuberculosis SUMu009]
 gi|308215362|gb|EFO74761.1| transposase [Mycobacterium tuberculosis SUMu001]
 gi|308354319|gb|EFP43170.1| transposase [Mycobacterium tuberculosis SUMu009]
Length=105

 Score =  209 bits (532),  Expect = 1e-52, Method: Compositional matrix adjust.
 Identities = 105/105 (100%), Positives = 105/105 (100%), Gaps = 0/105 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD
Sbjct  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60

Query  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDR  105
            AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDR
Sbjct  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDR  105


>gi|308374441|ref|ZP_07436061.2| transposase [Mycobacterium tuberculosis SUMu006]
 gi|308341901|gb|EFP30752.1| transposase [Mycobacterium tuberculosis SUMu006]
Length=117

 Score =  208 bits (529),  Expect = 3e-52, Method: Compositional matrix adjust.
 Identities = 104/104 (100%), Positives = 104/104 (100%), Gaps = 0/104 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD
Sbjct  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60

Query  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELD  104
            AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELD
Sbjct  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELD  104


>gi|308371506|ref|ZP_07425169.2| transposase [Mycobacterium tuberculosis SUMu003]
 gi|308372951|ref|ZP_07430504.2| transposase [Mycobacterium tuberculosis SUMu005]
 gi|308328619|gb|EFP17470.1| transposase [Mycobacterium tuberculosis SUMu003]
 gi|308339344|gb|EFP28195.1| transposase [Mycobacterium tuberculosis SUMu005]
Length=103

 Score =  205 bits (521),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 103/103 (100%), Positives = 103/103 (100%), Gaps = 0/103 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD
Sbjct  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60

Query  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAEL  103
            AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAEL
Sbjct  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAEL  103


>gi|308406122|ref|ZP_07495202.2| transposase [Mycobacterium tuberculosis SUMu012]
 gi|308364456|gb|EFP53307.1| transposase [Mycobacterium tuberculosis SUMu012]
Length=100

 Score =  200 bits (508),  Expect = 6e-50, Method: Compositional matrix adjust.
 Identities = 100/100 (100%), Positives = 100/100 (100%), Gaps = 0/100 (0%)

Query  1   MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
           MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD
Sbjct  1   MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60

Query  61  AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFA  100
           AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFA
Sbjct  61  AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFA  100


>gi|308371762|ref|ZP_07426151.2| transposase [Mycobacterium tuberculosis SUMu004]
 gi|308335576|gb|EFP24427.1| transposase [Mycobacterium tuberculosis SUMu004]
Length=97

 Score =  192 bits (489),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 97/97 (100%), Positives = 97/97 (100%), Gaps = 0/97 (0%)

Query  1   MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
           MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD
Sbjct  1   MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60

Query  61  AGARPGTTTEESAELKRLRRDNAELRRANAILKTASA  97
           AGARPGTTTEESAELKRLRRDNAELRRANAILKTASA
Sbjct  61  AGARPGTTTEESAELKRLRRDNAELRRANAILKTASA  97


>gi|308370082|ref|ZP_07420236.2| transposase [Mycobacterium tuberculosis SUMu002]
 gi|308325379|gb|EFP14230.1| transposase [Mycobacterium tuberculosis SUMu002]
Length=96

 Score =  191 bits (485),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 96/96 (100%), Positives = 96/96 (100%), Gaps = 0/96 (0%)

Query  1   MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
           MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD
Sbjct  1   MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60

Query  61  AGARPGTTTEESAELKRLRRDNAELRRANAILKTAS  96
           AGARPGTTTEESAELKRLRRDNAELRRANAILKTAS
Sbjct  61  AGARPGTTTEESAELKRLRRDNAELRRANAILKTAS  96


>gi|308232364|ref|ZP_07415839.2| transposase [Mycobacterium tuberculosis SUMu001]
 gi|308374448|ref|ZP_07436087.2| transposase [Mycobacterium tuberculosis SUMu006]
 gi|308214212|gb|EFO73611.1| transposase [Mycobacterium tuberculosis SUMu001]
 gi|308341877|gb|EFP30728.1| transposase [Mycobacterium tuberculosis SUMu006]
Length=94

 Score =  188 bits (477),  Expect = 3e-46, Method: Compositional matrix adjust.
 Identities = 94/94 (100%), Positives = 94/94 (100%), Gaps = 0/94 (0%)

Query  1   MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
           MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD
Sbjct  1   MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60

Query  61  AGARPGTTTEESAELKRLRRDNAELRRANAILKT  94
           AGARPGTTTEESAELKRLRRDNAELRRANAILKT
Sbjct  61  AGARPGTTTEESAELKRLRRDNAELRRANAILKT  94


>gi|308375301|ref|ZP_07443478.2| transposase [Mycobacterium tuberculosis SUMu007]
 gi|308346820|gb|EFP35671.1| transposase [Mycobacterium tuberculosis SUMu007]
Length=96

 Score =  187 bits (476),  Expect = 3e-46, Method: Compositional matrix adjust.
 Identities = 95/96 (99%), Positives = 96/96 (100%), Gaps = 0/96 (0%)

Query  13   LRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGARPGTTTEES  72
            +RERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGARPGTTTEES
Sbjct  1    MRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGARPGTTTEES  60

Query  73   AELKRLRRDNAELRRANAILKTASAFFAAELDRPAR  108
            AELKRLRRDNAELRRANAILKTASAFFAAELDRPAR
Sbjct  61   AELKRLRRDNAELRRANAILKTASAFFAAELDRPAR  96


>gi|296165475|ref|ZP_06848008.1| transposase IS6110 [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295899166|gb|EFG78639.1| transposase IS6110 [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=108

 Score =  183 bits (464),  Expect = 8e-45, Method: Compositional matrix adjust.
 Identities = 90/107 (85%), Positives = 98/107 (92%), Gaps = 0/107 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            MSG +S+RYPPELRERAVRMV EI  QH+SEWAAI EVARLLGVG AETVRKWVRQAQ+D
Sbjct  1    MSGSTSKRYPPELRERAVRMVVEISDQHESEWAAICEVARLLGVGTAETVRKWVRQAQID  60

Query  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRPA  107
            AG+RPGT +EESAELK+LRR+ AELRRANAILKTASAFF AELDRPA
Sbjct  61   AGSRPGTASEESAELKKLRREVAELRRANAILKTASAFFVAELDRPA  107


>gi|308377136|ref|ZP_07441247.2| transposase [Mycobacterium tuberculosis SUMu008]
 gi|308377703|ref|ZP_07668574.1| transposase [Mycobacterium tuberculosis SUMu009]
 gi|308378274|ref|ZP_07482087.2| transposase [Mycobacterium tuberculosis SUMu009]
 7 more sequence titles
 Length=91

 Score =  182 bits (461),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 91/91 (100%), Positives = 91/91 (100%), Gaps = 0/91 (0%)

Query  1   MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
           MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD
Sbjct  1   MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60

Query  61  AGARPGTTTEESAELKRLRRDNAELRRANAI  91
           AGARPGTTTEESAELKRLRRDNAELRRANAI
Sbjct  61  AGARPGTTTEESAELKRLRRDNAELRRANAI  91


>gi|254363366|ref|ZP_04979412.1| hypothetical protein TBHG_00398 [Mycobacterium tuberculosis str. 
Haarlem]
 gi|134148880|gb|EBA40925.1| hypothetical protein TBHG_00398 [Mycobacterium tuberculosis str. 
Haarlem]
Length=91

 Score =  179 bits (455),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 90/91 (99%), Positives = 91/91 (100%), Gaps = 0/91 (0%)

Query  18   VRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGARPGTTTEESAELKR  77
            +RMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGARPGTTTEESAELKR
Sbjct  1    MRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGARPGTTTEESAELKR  60

Query  78   LRRDNAELRRANAILKTASAFFAAELDRPAR  108
            LRRDNAELRRANAILKTASAFFAAELDRPAR
Sbjct  61   LRRDNAELRRANAILKTASAFFAAELDRPAR  91


>gi|308374097|ref|ZP_07434865.2| transposase [Mycobacterium tuberculosis SUMu006]
 gi|308343057|gb|EFP31908.1| transposase [Mycobacterium tuberculosis SUMu006]
Length=90

 Score =  178 bits (451),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 89/90 (99%), Positives = 89/90 (99%), Gaps = 0/90 (0%)

Query  1   MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
           MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD
Sbjct  1   MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60

Query  61  AGARPGTTTEESAELKRLRRDNAELRRANA  90
           AGARPGTTTEESAELKRLRRDNAELRRAN 
Sbjct  61  AGARPGTTTEESAELKRLRRDNAELRRANG  90


>gi|308369294|ref|ZP_07417232.2| transposase [Mycobacterium tuberculosis SUMu002]
 gi|308370226|ref|ZP_07666891.1| transposase [Mycobacterium tuberculosis SUMu002]
 gi|308371573|ref|ZP_07425372.2| hypothetical protein TMDG_01537 [Mycobacterium tuberculosis SUMu004]
 29 more sequence titles
 Length=89

 Score =  177 bits (448),  Expect = 5e-43, Method: Compositional matrix adjust.
 Identities = 89/89 (100%), Positives = 89/89 (100%), Gaps = 0/89 (0%)

Query  20   MVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGARPGTTTEESAELKRLR  79
            MVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGARPGTTTEESAELKRLR
Sbjct  1    MVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGARPGTTTEESAELKRLR  60

Query  80   RDNAELRRANAILKTASAFFAAELDRPAR  108
            RDNAELRRANAILKTASAFFAAELDRPAR
Sbjct  61   RDNAELRRANAILKTASAFFAAELDRPAR  89


>gi|308373994|ref|ZP_07434444.2| transposase [Mycobacterium tuberculosis SUMu006]
 gi|308343313|gb|EFP32164.1| transposase [Mycobacterium tuberculosis SUMu006]
Length=85

 Score =  171 bits (433),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 85/85 (100%), Positives = 85/85 (100%), Gaps = 0/85 (0%)

Query  1   MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
           MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD
Sbjct  1   MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60

Query  61  AGARPGTTTEESAELKRLRRDNAEL  85
           AGARPGTTTEESAELKRLRRDNAEL
Sbjct  61  AGARPGTTTEESAELKRLRRDNAEL  85


>gi|308378918|ref|ZP_07484322.2| transposase [Mycobacterium tuberculosis SUMu010]
 gi|308358805|gb|EFP47656.1| transposase [Mycobacterium tuberculosis SUMu010]
Length=97

 Score =  169 bits (427),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 85/87 (98%), Positives = 86/87 (99%), Gaps = 0/87 (0%)

Query  13  LRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGARPGTTTEES  72
           +RERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGARPGTTTEES
Sbjct  1   MRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGARPGTTTEES  60

Query  73  AELKRLRRDNAELRRANAILKTASAFF  99
           AELKRLRRDNAELRRANAILKTASAF 
Sbjct  61  AELKRLRRDNAELRRANAILKTASAFV  87


>gi|258652727|ref|YP_003201883.1| transposase IS3/IS911 family protein [Nakamurella multipartita 
DSM 44233]
 gi|258653640|ref|YP_003202796.1| transposase IS3/IS911 family protein [Nakamurella multipartita 
DSM 44233]
 gi|258653757|ref|YP_003202913.1| transposase IS3/IS911 family protein [Nakamurella multipartita 
DSM 44233]
 gi|258555952|gb|ACV78894.1| transposase IS3/IS911 family protein [Nakamurella multipartita 
DSM 44233]
 gi|258556865|gb|ACV79807.1| transposase IS3/IS911 family protein [Nakamurella multipartita 
DSM 44233]
 gi|258556982|gb|ACV79924.1| transposase IS3/IS911 family protein [Nakamurella multipartita 
DSM 44233]
Length=108

 Score =  168 bits (426),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 83/107 (78%), Positives = 96/107 (90%), Gaps = 0/107 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            M G S+RRYP EL++RAVRMVAEI G+H+SEWAA+S VA LLGVG AETVRKWVRQA+VD
Sbjct  1    MPGDSTRRYPLELKQRAVRMVAEIAGEHESEWAAMSRVAELLGVGTAETVRKWVRQAEVD  60

Query  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRPA  107
             G R GT++EESAEL+RLRR+NAEL+RANAILK ASAFFAAELDRP+
Sbjct  61   TGTRVGTSSEESAELRRLRRENAELKRANAILKAASAFFAAELDRPS  107


>gi|306972288|ref|ZP_07484949.1| hypothetical protein TMJG_00196 [Mycobacterium tuberculosis SUMu010]
 gi|308358239|gb|EFP47090.1| hypothetical protein TMJG_00196 [Mycobacterium tuberculosis SUMu010]
Length=108

 Score =  166 bits (419),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 86/88 (98%), Positives = 86/88 (98%), Gaps = 1/88 (1%)

Query  20   MVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGARPGTTTEESAELKRLR  79
            MVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGARPGTTTEESAELKRLR
Sbjct  1    MVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGARPGTTTEESAELKRLR  60

Query  80   RDNAELRRANAILKTASAFFAAELDRPA  107
            RDNAELRRANAILKTASAFFAAE  RPA
Sbjct  61   RDNAELRRANAILKTASAFFAAEA-RPA  87


>gi|126434809|ref|YP_001070500.1| transposase IS3/IS911 family protein [Mycobacterium sp. JLS]
 gi|126234609|gb|ABN98009.1| transposase IS3/IS911 family protein [Mycobacterium sp. JLS]
Length=89

 Score =  155 bits (393),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 76/87 (88%), Positives = 83/87 (96%), Gaps = 0/87 (0%)

Query  20   MVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGARPGTTTEESAELKRLR  79
            MVAEI  QH+SEWAA+ EVARLLG+G AETVRKWVRQA+VDAGARPGTTTEESAELK+LR
Sbjct  1    MVAEISDQHESEWAAMGEVARLLGIGTAETVRKWVRQAEVDAGARPGTTTEESAELKKLR  60

Query  80   RDNAELRRANAILKTASAFFAAELDRP  106
            R+NAEL+RANAILKTASAFFAAELDRP
Sbjct  61   RENAELKRANAILKTASAFFAAELDRP  87


>gi|298525257|ref|ZP_07012666.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|298495051|gb|EFI30345.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=92

 Score =  155 bits (391),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 77/78 (99%), Positives = 77/78 (99%), Gaps = 0/78 (0%)

Query  1   MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
           MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD
Sbjct  1   MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60

Query  61  AGARPGTTTEESAELKRL  78
           AGARPGTTTEESAELK L
Sbjct  61  AGARPGTTTEESAELKAL  78


>gi|308377789|ref|ZP_07480423.2| hypothetical protein TMIG_01918 [Mycobacterium tuberculosis SUMu009]
 gi|308354592|gb|EFP43443.1| hypothetical protein TMIG_01918 [Mycobacterium tuberculosis SUMu009]
Length=75

 Score =  152 bits (383),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 75/75 (100%), Positives = 75/75 (100%), Gaps = 0/75 (0%)

Query  1   MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
           MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD
Sbjct  1   MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60

Query  61  AGARPGTTTEESAEL  75
           AGARPGTTTEESAEL
Sbjct  61  AGARPGTTTEESAEL  75


>gi|258651477|ref|YP_003200633.1| transposase IS3/IS911 family protein [Nakamurella multipartita 
DSM 44233]
 gi|258554702|gb|ACV77644.1| transposase IS3/IS911 family protein [Nakamurella multipartita 
DSM 44233]
Length=111

 Score =  150 bits (379),  Expect = 5e-35, Method: Compositional matrix adjust.
 Identities = 74/99 (75%), Positives = 87/99 (88%), Gaps = 0/99 (0%)

Query  1   MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
           M G S+RRYP EL++RAVRMVAEI G+H+SEWAA+S VA LLGVG AETVRKWVRQA+VD
Sbjct  1   MPGDSTRRYPLELKQRAVRMVAEIAGEHESEWAAMSRVAELLGVGTAETVRKWVRQAEVD  60

Query  61  AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFF  99
            G R GT++EESAEL+RLRR+NAEL+RANAILK ASA+ 
Sbjct  61  TGTRVGTSSEESAELRRLRRENAELKRANAILKAASAYV  99


>gi|290963355|ref|YP_003494537.1| IS transposase [Streptomyces scabiei 87.22]
 gi|260652881|emb|CBG76016.1| putative IS transposase [Streptomyces scabiei 87.22]
Length=108

 Score =  149 bits (377),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 69/99 (70%), Positives = 87/99 (88%), Gaps = 0/99 (0%)

Query  8    RYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGARPGT  67
            +YP ELR+RAVRMVAE+R ++D+EW+A+  VA  LG+G  ET+RKWVRQ Q+DAG RPGT
Sbjct  6    QYPLELRKRAVRMVAEVRPEYDTEWSAMKAVASKLGIGTTETLRKWVRQDQIDAGTRPGT  65

Query  68   TTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRP  106
            TT+ESAELKRL+++NAEL+RAN ILK A++FFAAELDRP
Sbjct  66   TTDESAELKRLKKENAELKRANDILKAAASFFAAELDRP  104


>gi|163839374|ref|YP_001623779.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|163841183|ref|YP_001625588.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|163841201|ref|YP_001625606.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|162952850|gb|ABY22365.1| OrfA [Renibacterium salmoninarum ATCC 33209]
 gi|162954659|gb|ABY24174.1| OrfA [Renibacterium salmoninarum ATCC 33209]
 gi|162954677|gb|ABY24192.1| OrfA [Renibacterium salmoninarum ATCC 33209]
Length=121

 Score =  148 bits (374),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 74/105 (71%), Positives = 90/105 (86%), Gaps = 1/105 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            M+G ++ RYP EL++RAVRMVAE+ G   SEWAA+ +VA+LLGVG  ETVRKWVRQA++D
Sbjct  1    MAGKTTTRYPQELKDRAVRMVAEMEGA-SSEWAAMQKVAQLLGVGVPETVRKWVRQAEID  59

Query  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDR  105
             G R GTT+ ESAELKRLRR+NAEL+RANAIL++ASAFFA ELDR
Sbjct  60   VGTRTGTTSTESAELKRLRRENAELKRANAILRSASAFFAVELDR  104


>gi|163840115|ref|YP_001624520.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|162953591|gb|ABY23106.1| OrfA [Renibacterium salmoninarum ATCC 33209]
Length=121

 Score =  148 bits (373),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 74/105 (71%), Positives = 90/105 (86%), Gaps = 1/105 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            M+G ++ RYP EL++RAVRMVAE+ G   SEWAA+ +VA+LLGVG  ETVRKWVRQA++D
Sbjct  1    MAGKTTTRYPQELKDRAVRMVAEMEGA-SSEWAAMQKVAQLLGVGVPETVRKWVRQAEID  59

Query  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDR  105
             G R GTT+ ESAELKRLRR+NAEL+RANAIL++ASAFFA ELDR
Sbjct  60   VGTRTGTTSTESAELKRLRRENAELKRANAILRSASAFFAVELDR  104


>gi|118468019|ref|YP_885130.1| IS1137, transposase orfA [Mycobacterium smegmatis str. MC2 155]
 gi|118470833|ref|YP_887011.1| IS1137, transposase orfA [Mycobacterium smegmatis str. MC2 155]
 gi|118169306|gb|ABK70202.1| IS1137, transposase orfA [Mycobacterium smegmatis str. MC2 155]
 gi|118172120|gb|ABK73016.1| IS1137, transposase orfA [Mycobacterium smegmatis str. MC2 155]
Length=108

 Score =  147 bits (371),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 73/108 (68%), Positives = 89/108 (83%), Gaps = 0/108 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            M   SSRRYP EL+ RAV+MVA++R +  SEW A+  VA LLGVG AETVRKWVRQA++D
Sbjct  1    MGSKSSRRYPDELKVRAVQMVADLRSETVSEWEAMGRVADLLGVGTAETVRKWVRQAEID  60

Query  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRPAR  108
            AG+R G T+EES  L++LRR+NAEL+RANAILK AS FFAAELDRP++
Sbjct  61   AGSRAGQTSEESEVLRKLRRENAELKRANAILKAASVFFAAELDRPSQ  108


>gi|163839731|ref|YP_001624136.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|162953207|gb|ABY22722.1| OrfA [Renibacterium salmoninarum ATCC 33209]
Length=187

 Score =  147 bits (371),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 74/105 (71%), Positives = 90/105 (86%), Gaps = 1/105 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            M+G ++ RYP EL++RAVRMVAE+ G   SEWAA+ +VA+LLGVG  ETVRKWVRQA++D
Sbjct  1    MAGKTTTRYPQELKDRAVRMVAEMEGA-SSEWAAMQKVAQLLGVGVPETVRKWVRQAEID  59

Query  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDR  105
             G R GTT+ ESAELKRLRR+NAEL+RANAIL++ASAFFA ELDR
Sbjct  60   VGTRTGTTSTESAELKRLRRENAELKRANAILRSASAFFAVELDR  104


>gi|163840940|ref|YP_001625345.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|162954416|gb|ABY23931.1| OrfA [Renibacterium salmoninarum ATCC 33209]
Length=121

 Score =  147 bits (371),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 73/105 (70%), Positives = 89/105 (85%), Gaps = 1/105 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            M+G ++ RYP EL++RAVRMVAE+ G   SEWAA+ +VA+LLGVG  ETVRKWVRQA++D
Sbjct  1    MAGKTTTRYPQELKDRAVRMVAEMEGA-SSEWAAMQKVAQLLGVGVPETVRKWVRQAEID  59

Query  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDR  105
             G R GTT+ ESAELKRLRR+N EL+RANAIL++ASAFFA ELDR
Sbjct  60   VGTRTGTTSTESAELKRLRRENTELKRANAILRSASAFFAVELDR  104


>gi|163839701|ref|YP_001624106.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|163839841|ref|YP_001624246.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|163840018|ref|YP_001624423.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 31 more sequence titles
 Length=121

 Score =  147 bits (371),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 73/105 (70%), Positives = 89/105 (85%), Gaps = 1/105 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            M+G ++ RYP EL++R VRMVAE+ G   SEWAA+ +VA+LLGVG  ETVRKWVRQA++D
Sbjct  1    MAGKTTTRYPQELKDRTVRMVAEMEGA-SSEWAAMQKVAQLLGVGVPETVRKWVRQAEID  59

Query  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDR  105
             G R GTT+ ESAELKRLRR+NAEL+RANAIL++ASAFFA ELDR
Sbjct  60   VGTRTGTTSTESAELKRLRRENAELKRANAILRSASAFFAVELDR  104


>gi|163839421|ref|YP_001623826.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|162952897|gb|ABY22412.1| OrfA [Renibacterium salmoninarum ATCC 33209]
Length=121

 Score =  147 bits (370),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 73/105 (70%), Positives = 89/105 (85%), Gaps = 1/105 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            M+G ++ RYP EL++R VRMVAE+ G   SEWAA+ +VA+LLGVG  ETVRKWVRQA++D
Sbjct  1    MAGKTTTRYPQELKDRTVRMVAEMEGA-SSEWAAMQKVAQLLGVGVPETVRKWVRQAEID  59

Query  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDR  105
             G R GTT+ ESAELKRLRR+NAEL+RANAIL++ASAFFA ELDR
Sbjct  60   VGTRTGTTSTESAELKRLRRENAELKRANAILRSASAFFAVELDR  104


>gi|167967011|ref|ZP_02549288.1| transposase [Mycobacterium tuberculosis H37Ra]
Length=97

 Score =  147 bits (370),  Expect = 7e-34, Method: Compositional matrix adjust.
 Identities = 74/80 (93%), Positives = 74/80 (93%), Gaps = 0/80 (0%)

Query  20  MVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGARPGTTTEESAELKRLR  79
           MVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGARPGTTTEESAELKRLR
Sbjct  1   MVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGARPGTTTEESAELKRLR  60

Query  80  RDNAELRRANAILKTASAFF  99
           RDNAELRRANAIL     F 
Sbjct  61  RDNAELRRANAILIDRVGFL  80


>gi|308380056|ref|ZP_07488542.2| transposase [Mycobacterium tuberculosis SUMu011]
 gi|308362754|gb|EFP51605.1| transposase [Mycobacterium tuberculosis SUMu011]
Length=73

 Score =  147 bits (370),  Expect = 8e-34, Method: Compositional matrix adjust.
 Identities = 72/73 (99%), Positives = 72/73 (99%), Gaps = 0/73 (0%)

Query  1   MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
           MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQ QVD
Sbjct  1   MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQVQVD  60

Query  61  AGARPGTTTEESA  73
           AGARPGTTTEESA
Sbjct  61  AGARPGTTTEESA  73


>gi|163840540|ref|YP_001624945.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|162954016|gb|ABY23531.1| OrfA [Renibacterium salmoninarum ATCC 33209]
Length=121

 Score =  146 bits (368),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 73/105 (70%), Positives = 89/105 (85%), Gaps = 1/105 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            M+G ++ RYP EL++R VRMVAE+ G   S WAA+ +VA+LLGVG  ETVRKWVRQA++D
Sbjct  1    MAGKTTTRYPQELKDRTVRMVAEMEGA-SSAWAAMQKVAQLLGVGVPETVRKWVRQAEID  59

Query  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDR  105
             G R GTT+ ESAELKRLRR+NAEL+RANAIL++ASAFFAAELDR
Sbjct  60   VGTRTGTTSTESAELKRLRRENAELKRANAILRSASAFFAAELDR  104


>gi|163840486|ref|YP_001624891.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|163840878|ref|YP_001625283.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|163840973|ref|YP_001625378.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|162953962|gb|ABY23477.1| OrfA [Renibacterium salmoninarum ATCC 33209]
 gi|162954354|gb|ABY23869.1| OrfA [Renibacterium salmoninarum ATCC 33209]
 gi|162954449|gb|ABY23964.1| OrfA [Renibacterium salmoninarum ATCC 33209]
Length=121

 Score =  146 bits (368),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 73/105 (70%), Positives = 89/105 (85%), Gaps = 1/105 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            M+G ++ RYP EL++RAVRMVAE+ G   S WAA+ +VA+LLGVG  ETVRKWVRQA++D
Sbjct  1    MAGKTTTRYPQELKDRAVRMVAEMEGA-SSAWAAMQKVAQLLGVGVPETVRKWVRQAEID  59

Query  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDR  105
             G R GTT+ ESAELKRLRR+NAEL+RANAIL++ASAFFA ELDR
Sbjct  60   VGTRTGTTSTESAELKRLRRENAELKRANAILRSASAFFAVELDR  104


>gi|163840374|ref|YP_001624779.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|163840379|ref|YP_001624784.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|162953850|gb|ABY23365.1| OrfA [Renibacterium salmoninarum ATCC 33209]
 gi|162953855|gb|ABY23370.1| OrfA [Renibacterium salmoninarum ATCC 33209]
Length=121

 Score =  146 bits (368),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 72/105 (69%), Positives = 88/105 (84%), Gaps = 1/105 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            M+G ++ RYP EL++R VRMVAE+ G   SEWAA+ +VA+LLGVG  ETVRKWVRQA++D
Sbjct  1    MAGKTTTRYPQELKDRTVRMVAEMEGA-SSEWAAMQKVAQLLGVGVPETVRKWVRQAEID  59

Query  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDR  105
             G R GTT+ ESAELKRLRR+N EL+RANAIL++ASAFFA ELDR
Sbjct  60   VGTRTGTTSTESAELKRLRRENTELKRANAILRSASAFFAVELDR  104


>gi|163838954|ref|YP_001623359.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|163839194|ref|YP_001623599.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|163839337|ref|YP_001623742.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 15 more sequence titles
 Length=121

 Score =  145 bits (367),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 72/105 (69%), Positives = 88/105 (84%), Gaps = 1/105 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            M+G ++ RYP EL++  VRMVAE+ G   SEWAA+ +VA+LLGVG  ETVRKWVRQA++D
Sbjct  1    MAGKTTTRYPQELKDHTVRMVAEMEGA-SSEWAAMQKVAQLLGVGVPETVRKWVRQAEID  59

Query  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDR  105
             G R GTT+ ESAELKRLRR+NAEL+RANAIL++ASAFFA ELDR
Sbjct  60   VGTRTGTTSTESAELKRLRRENAELKRANAILRSASAFFAVELDR  104


>gi|163839897|ref|YP_001624302.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|163841334|ref|YP_001625739.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|163842165|ref|YP_001626570.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|162953373|gb|ABY22888.1| OrfA [Renibacterium salmoninarum ATCC 33209]
 gi|162954810|gb|ABY24325.1| OrfB [Renibacterium salmoninarum ATCC 33209]
 gi|162955641|gb|ABY25156.1| OrfA [Renibacterium salmoninarum ATCC 33209]
Length=121

 Score =  145 bits (366),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 73/105 (70%), Positives = 89/105 (85%), Gaps = 1/105 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            M+G ++ RYP EL++RAVRMVAE+ G   SEWAA+ +VA+LLGVG  ETVRKWVRQA++D
Sbjct  1    MAGKTTTRYPQELKDRAVRMVAEMEGA-SSEWAAMQKVAQLLGVGVPETVRKWVRQAEID  59

Query  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDR  105
             G R GTT+ ESAELKRLRR+NAEL+RANAIL++ASAF A ELDR
Sbjct  60   VGTRTGTTSTESAELKRLRRENAELKRANAILRSASAFVAVELDR  104


>gi|284989768|ref|YP_003408322.1| transposase IS3/IS911 family protein [Geodermatophilus obscurus 
DSM 43160]
 gi|284063013|gb|ADB73951.1| transposase IS3/IS911 family protein [Geodermatophilus obscurus 
DSM 43160]
Length=109

 Score =  145 bits (365),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 72/105 (69%), Positives = 85/105 (81%), Gaps = 0/105 (0%)

Query  4    GSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGA  63
            G   +YPPELRERAVR+VAE R  HDSEW A+  VA+ LG+G  ETVRKWVR+A+VDAGA
Sbjct  3    GRHGQYPPELRERAVRLVAECRADHDSEWDAMRSVAQKLGIGTTETVRKWVRRAEVDAGA  62

Query  64   RPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRPAR  108
            RPG T+EESAEL+RL+ +  ELRRAN IL+ A+ FFAAELDRP R
Sbjct  63   RPGVTSEESAELRRLKAEVKELRRANEILRAAAGFFAAELDRPHR  107


>gi|163840457|ref|YP_001624862.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|163841958|ref|YP_001626363.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|162953933|gb|ABY23448.1| OrfA [Renibacterium salmoninarum ATCC 33209]
 gi|162955434|gb|ABY24949.1| OrfA [Renibacterium salmoninarum ATCC 33209]
Length=121

 Score =  144 bits (364),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 72/105 (69%), Positives = 88/105 (84%), Gaps = 1/105 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            M+G ++ RYP EL++R VRMVAE+ G   S WAA+ +VA+LLGVG  ETVRKWVRQA++D
Sbjct  1    MAGKTTTRYPQELKDRTVRMVAEMEGA-SSAWAAMQKVAQLLGVGVPETVRKWVRQAEID  59

Query  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDR  105
             G R GTT+ ESAELKRLRR+NAEL+RANAIL++ASAFFA ELDR
Sbjct  60   VGTRTGTTSTESAELKRLRRENAELKRANAILRSASAFFAVELDR  104


>gi|163840578|ref|YP_001624983.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|162954054|gb|ABY23569.1| OrfA [Renibacterium salmoninarum ATCC 33209]
Length=121

 Score =  144 bits (364),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 72/105 (69%), Positives = 88/105 (84%), Gaps = 1/105 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            M+G ++ RYP EL++  VRMVAE+ G   S WAA+ +VA+LLGVG  ETVRKWVRQA++D
Sbjct  1    MAGKTTTRYPQELKDHTVRMVAEMEGA-SSAWAAMQKVAQLLGVGVPETVRKWVRQAEID  59

Query  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDR  105
             G R GTT+ ESAELKRLRR+NAEL+RANAIL++ASAFFAAELDR
Sbjct  60   VGTRTGTTSTESAELKRLRRENAELKRANAILRSASAFFAAELDR  104


>gi|145226038|ref|YP_001136692.1| transposase IS3/IS911 family protein [Mycobacterium gilvum PYR-GCK]
 gi|315441607|ref|YP_004074484.1| Transposase [Mycobacterium sp. Spyr1]
 gi|315443625|ref|YP_004076504.1| transposase [Mycobacterium sp. Spyr1]
 9 more sequence titles
 Length=108

 Score =  144 bits (364),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 72/108 (67%), Positives = 87/108 (81%), Gaps = 0/108 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            M   SS+RYP EL+ RAV+MVA++R    SEW A+  VA LLGVG AETVRKWVRQA++D
Sbjct  1    MGTKSSKRYPDELKARAVQMVADLRSDTVSEWEAMGRVADLLGVGTAETVRKWVRQAEID  60

Query  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRPAR  108
            AG R G T+EES  L++LRR+NAEL+RANAILK AS FFAAELDRP++
Sbjct  61   AGDRAGQTSEESEVLRKLRRENAELKRANAILKAASVFFAAELDRPSQ  108


>gi|163842192|ref|YP_001626597.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|162955668|gb|ABY25183.1| OrfA [Renibacterium salmoninarum ATCC 33209]
Length=121

 Score =  144 bits (364),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 71/105 (68%), Positives = 87/105 (83%), Gaps = 1/105 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            M+G ++ RYP EL++  V MVAE+ G   SEWAA+ +VA+LLGVG  ETVRKWVRQA++D
Sbjct  1    MAGKTTTRYPQELKDHTVHMVAEMEGA-SSEWAAMQKVAQLLGVGVPETVRKWVRQAEID  59

Query  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDR  105
             G R GTT+ ESAELKRLRR+NAEL+RANAIL++ASAFFA ELDR
Sbjct  60   VGTRTGTTSTESAELKRLRRENAELKRANAILRSASAFFAVELDR  104


>gi|163839868|ref|YP_001624273.1| IS994 [Renibacterium salmoninarum ATCC 33209]
 gi|162953344|gb|ABY22859.1| OrfA [Renibacterium salmoninarum ATCC 33209]
Length=121

 Score =  144 bits (363),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 72/105 (69%), Positives = 88/105 (84%), Gaps = 1/105 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            M+G ++ RYP EL++R VRMVAE+ G   SEWAA+ +VA+LLGVG  ETVRKWVRQA++D
Sbjct  1    MAGKTTTRYPQELKDRTVRMVAEMEGA-SSEWAAMQKVAQLLGVGVPETVRKWVRQAEID  59

Query  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDR  105
             G R GTT+ ESAELKRLRR+NAEL+RANAIL++ASAF A ELDR
Sbjct  60   VGTRTGTTSTESAELKRLRRENAELKRANAILRSASAFVAVELDR  104


>gi|108802561|ref|YP_642757.1| transposase IS3/IS911 [Mycobacterium sp. MCS]
 gi|119855386|ref|YP_935989.1| transposase IS3/IS911 family protein [Mycobacterium sp. KMS]
 gi|108772980|gb|ABG11701.1| transposase IS3/IS911 [Mycobacterium sp. MCS]
 gi|119698103|gb|ABL95174.1| transposase IS3/IS911 family protein [Mycobacterium sp. KMS]
Length=108

 Score =  144 bits (362),  Expect = 6e-33, Method: Compositional matrix adjust.
 Identities = 72/108 (67%), Positives = 85/108 (79%), Gaps = 0/108 (0%)

Query  1    MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVD  60
            M   SSRRYP EL+ RAV+MV ++R    SEW A+  VA LLGVG AETVRKWVRQA++D
Sbjct  1    MGSKSSRRYPVELKARAVQMVVDLRSDTVSEWEAMGRVADLLGVGTAETVRKWVRQAEID  60

Query  61   AGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRPAR  108
            AG R G T+EES  L++LRR+NAEL+RANAILK AS FFAAELDRP +
Sbjct  61   AGGRAGQTSEESEVLRKLRRENAELKRANAILKAASVFFAAELDRPCQ  108



Lambda     K      H
   0.317    0.128    0.366 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 129996839040


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40