BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2490c
Length=1660
Score E
Sequences producing significant alignments: (Bits) Value
gi|57116996|ref|YP_177887.1| PE-PGRS family protein [Mycobacteri... 2598 0.0
gi|15842017|ref|NP_337054.1| PE_PGRS family protein [Mycobacteri... 2598 0.0
gi|340627504|ref|YP_004745956.1| PE-PGRS family protein [Mycobac... 2570 0.0
gi|339298994|gb|AEJ51104.1| PE-PGRS family protein [Mycobacteriu... 2568 0.0
gi|31793670|ref|NP_856163.1| hypothetical protein Mb2518c [Mycob... 259 3e-66
gi|339632516|ref|YP_004724158.1| PE-PGRS family protein [Mycobac... 259 4e-66
gi|344220317|gb|AEN00948.1| PE-PGRS family protein [Mycobacteriu... 259 4e-66
gi|253798432|ref|YP_003031433.1| hypothetical protein TBMG_04024... 259 4e-66
gi|289553720|ref|ZP_06442930.1| LOW QUALITY PROTEIN: predicted p... 258 6e-66
gi|121638372|ref|YP_978596.1| PE-PGRS family protein [Mycobacter... 257 1e-65
gi|297732087|ref|ZP_06961205.1| PE-PGRS family protein [Mycobact... 256 3e-65
gi|294994403|ref|ZP_06800094.1| PE-PGRS family protein [Mycobact... 246 2e-62
gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobac... 138 7e-30
gi|183981221|ref|YP_001849512.1| PE-PGRS family protein [Mycobac... 137 1e-29
gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobact... 128 9e-27
gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobac... 128 1e-26
gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobac... 127 2e-26
gi|121637380|ref|YP_977603.1| PE-PGRS family protein [Mycobacter... 127 2e-26
gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacteri... 126 3e-26
gi|339298064|gb|AEJ50174.1| putative PE family protein [Mycobact... 125 6e-26
gi|183980462|ref|YP_001848753.1| PE-PGRS family protein [Mycobac... 124 2e-25
gi|121636496|ref|YP_976719.1| PE-PGRS family protein [Mycobacter... 123 3e-25
gi|148660347|ref|YP_001281870.1| PE-PGRS family protein [Mycobac... 123 4e-25
gi|31791760|ref|NP_854253.1| PE-PGRS family protein [Mycobacteri... 123 4e-25
gi|57116755|ref|YP_177739.1| PE-PGRS family protein [Mycobacteri... 123 4e-25
gi|57116865|ref|YP_177812.1| PE-PGRS family protein [Mycobacteri... 123 4e-25
gi|15839979|ref|NP_335016.1| PE_PGRS family protein [Mycobacteri... 123 4e-25
gi|253799501|ref|YP_003032502.1| hypothetical protein TBMG_02531... 122 5e-25
gi|148822669|ref|YP_001287423.1| PE-PGRS family protein [Mycobac... 122 8e-25
gi|15840909|ref|NP_335946.1| PE_PGRS family protein [Mycobacteri... 122 8e-25
gi|148661242|ref|YP_001282765.1| PE-PGRS family protein [Mycobac... 121 1e-24
gi|183980964|ref|YP_001849255.1| PE-PGRS family protein [Mycobac... 121 1e-24
gi|183982664|ref|YP_001850955.1| PE-PGRS family protein, PE_PGRS... 120 2e-24
gi|183981230|ref|YP_001849521.1| PE-PGRS family protein [Mycobac... 120 2e-24
gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobac... 120 3e-24
gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobac... 119 3e-24
gi|183981229|ref|YP_001849520.1| PE-PGRS family protein [Mycobac... 119 3e-24
gi|183985012|ref|YP_001853303.1| PE-PGRS family protein [Mycobac... 115 6e-23
gi|183981609|ref|YP_001849900.1| PE-PGRS family protein [Mycobac... 114 2e-22
gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobac... 113 3e-22
gi|183985312|ref|YP_001853603.1| PE-PGRS family protein [Mycobac... 110 2e-21
gi|340627501|ref|YP_004745953.1| PE-PGRS family protein [Mycobac... 107 2e-20
gi|340626464|ref|YP_004744916.1| PE-PGRS family protein [Mycobac... 107 2e-20
gi|183985330|ref|YP_001853621.1| PE-PGRS family protein [Mycobac... 107 2e-20
gi|339633355|ref|YP_004724997.1| PE-PGRS family protein [Mycobac... 105 8e-20
gi|339299780|gb|AEJ51890.1| hypothetical protein CCDC5180_3053 [... 105 9e-20
gi|340628328|ref|YP_004746780.1| pe_pgrs50 protein [Mycobacteriu... 104 1e-19
gi|121639272|ref|YP_979496.1| hypothetical protein BCG_3414c [My... 104 1e-19
gi|148824551|ref|YP_001289305.1| PE-PGRS family protein [Mycobac... 104 2e-19
gi|341603297|emb|CCC65975.1| PE_PGRS50 [Mycobacterium bovis BCG ... 103 2e-19
>gi|57116996|ref|YP_177887.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|148662325|ref|YP_001283848.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|7441223|pir||A70869 hypothetical glycine-rich protein Rv2490c - Mycobacterium tuberculosis
(strain H37RV)
gi|41353424|emb|CAE55496.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|148506477|gb|ABQ74286.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=1660
Score = 2598 bits (6734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1660/1660 (100%), Positives = 1660/1660 (100%), Gaps = 0/1660 (0%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
Query 121 GAHGTAPGQPGGAGGLLFGNGGNGAAGAVGQVGGAGGAAGLFGIGGAGGAGGAGAPGGTG 180
GAHGTAPGQPGGAGGLLFGNGGNGAAGAVGQVGGAGGAAGLFGIGGAGGAGGAGAPGGTG
Sbjct 121 GAHGTAPGQPGGAGGLLFGNGGNGAAGAVGQVGGAGGAAGLFGIGGAGGAGGAGAPGGTG 180
Query 181 GTGGWLAGGGGVGGMGGAGGGAGGAGGNAGLFGNGGAGGAGGAGGGAGGAGGNAGWFGHG 240
GTGGWLAGGGGVGGMGGAGGGAGGAGGNAGLFGNGGAGGAGGAGGGAGGAGGNAGWFGHG
Sbjct 181 GTGGWLAGGGGVGGMGGAGGGAGGAGGNAGLFGNGGAGGAGGAGGGAGGAGGNAGWFGHG 240
Query 241 GAGGVGGVGAAGANGATPGQDGAAGVAGSDDGAGGDGLAGSDGGDGGAGGVGGNGGRGGW 300
GAGGVGGVGAAGANGATPGQDGAAGVAGSDDGAGGDGLAGSDGGDGGAGGVGGNGGRGGW
Sbjct 241 GAGGVGGVGAAGANGATPGQDGAAGVAGSDDGAGGDGLAGSDGGDGGAGGVGGNGGRGGW 300
Query 301 LLGNGGAGGVGGVGGAGGAGAAGGAGGAGATGINGPAGISAAGGDGGAGGNGGAGGNGGV 360
LLGNGGAGGVGGVGGAGGAGAAGGAGGAGATGINGPAGISAAGGDGGAGGNGGAGGNGGV
Sbjct 301 LLGNGGAGGVGGVGGAGGAGAAGGAGGAGATGINGPAGISAAGGDGGAGGNGGAGGNGGV 360
Query 361 GGAGGAGGSAGLLGYVGRAGDGGAGGGGGLGGAPGDGGAGGNGGSWLAAGDGGAGGHGGD 420
GGAGGAGGSAGLLGYVGRAGDGGAGGGGGLGGAPGDGGAGGNGGSWLAAGDGGAGGHGGD
Sbjct 361 GGAGGAGGSAGLLGYVGRAGDGGAGGGGGLGGAPGDGGAGGNGGSWLAAGDGGAGGHGGD 420
Query 421 PGLGGAGGAGGASGGAGARAGANGLAAGNDGPVSGGNGGKGGNGAHAPVAGGHGGNGGAG 480
PGLGGAGGAGGASGGAGARAGANGLAAGNDGPVSGGNGGKGGNGAHAPVAGGHGGNGGAG
Sbjct 421 PGLGGAGGAGGASGGAGARAGANGLAAGNDGPVSGGNGGKGGNGAHAPVAGGHGGNGGAG 480
Query 481 GNGGLVGDGGAGGHGGDGAAGAGYADMTAIFLGSSGTPGEDGGNGGAGGAGGAGGAHAGD 540
GNGGLVGDGGAGGHGGDGAAGAGYADMTAIFLGSSGTPGEDGGNGGAGGAGGAGGAHAGD
Sbjct 481 GNGGLVGDGGAGGHGGDGAAGAGYADMTAIFLGSSGTPGEDGGNGGAGGAGGAGGAHAGD 540
Query 541 GGAGGAGGNGGAGGAGGNGAHGFNAVLVSDGGNGGDGGAGGRGGDGGAGGAGGDAPAGRA 600
GGAGGAGGNGGAGGAGGNGAHGFNAVLVSDGGNGGDGGAGGRGGDGGAGGAGGDAPAGRA
Sbjct 541 GGAGGAGGNGGAGGAGGNGAHGFNAVLVSDGGNGGDGGAGGRGGDGGAGGAGGDAPAGRA 600
Query 601 GSQGVGGDGGAGGAGGAPGNGGSGGRGDMAFKDGDGGAGGDGGDPGAGGKGGAGGAGATE 660
GSQGVGGDGGAGGAGGAPGNGGSGGRGDMAFKDGDGGAGGDGGDPGAGGKGGAGGAGATE
Sbjct 601 GSQGVGGDGGAGGAGGAPGNGGSGGRGDMAFKDGDGGAGGDGGDPGAGGKGGAGGAGATE 660
Query 661 GVTGATGATVHSGGNGGKGGNGADATVAGANGGKGGAGGNGGLVGDGGAGGDGGSGAAGA 720
GVTGATGATVHSGGNGGKGGNGADATVAGANGGKGGAGGNGGLVGDGGAGGDGGSGAAGA
Sbjct 661 GVTGATGATVHSGGNGGKGGNGADATVAGANGGKGGAGGNGGLVGDGGAGGDGGSGAAGA 720
Query 721 NGANVGEDGADGTLSGQPGEGSEANGGQGGVGGGGAGGAGGDGGAGSSALGSGGNGGRGD 780
NGANVGEDGADGTLSGQPGEGSEANGGQGGVGGGGAGGAGGDGGAGSSALGSGGNGGRGD
Sbjct 721 NGANVGEDGADGTLSGQPGEGSEANGGQGGVGGGGAGGAGGDGGAGSSALGSGGNGGRGD 780
Query 781 AGQAGGAGGAGGAGGAGGSVSGDGGPGGKGGAGGAGGAGASGGGGGKGASGADSAEAVGG 840
AGQAGGAGGAGGAGGAGGSVSGDGGPGGKGGAGGAGGAGASGGGGGKGASGADSAEAVGG
Sbjct 781 AGQAGGAGGAGGAGGAGGSVSGDGGPGGKGGAGGAGGAGASGGGGGKGASGADSAEAVGG 840
Query 841 AGGKGGDGGVGGVGGDGGPGGDGGAGGAAPAGQVGSHGVGGVGGDGGLGGAGGNGGDGGH 900
AGGKGGDGGVGGVGGDGGPGGDGGAGGAAPAGQVGSHGVGGVGGDGGLGGAGGNGGDGGH
Sbjct 841 AGGKGGDGGVGGVGGDGGPGGDGGAGGAAPAGQVGSHGVGGVGGDGGLGGAGGNGGDGGH 900
Query 901 GSDGGDGGDGGDPGAGGLGGLGGDSGNGTRAASGVDASDHGPGSGGNGGNGGNGAQASVA 960
GSDGGDGGDGGDPGAGGLGGLGGDSGNGTRAASGVDASDHGPGSGGNGGNGGNGAQASVA
Sbjct 901 GSDGGDGGDGGDPGAGGLGGLGGDSGNGTRAASGVDASDHGPGSGGNGGNGGNGAQASVA 960
Query 961 GGAGGNGGDGGNAGRVGDGGAGGNGGDGAAGANGANSGAPGSDALALGQPGGNGGQGDAG 1020
GGAGGNGGDGGNAGRVGDGGAGGNGGDGAAGANGANSGAPGSDALALGQPGGNGGQGDAG
Sbjct 961 GGAGGNGGDGGNAGRVGDGGAGGNGGDGAAGANGANSGAPGSDALALGQPGGNGGQGDAG 1020
Query 1021 QAGGAGGAGGAGGAGGSVSGDGGAGGNGGAGGNGGVGASGGAGARGANGIDSIGGTGGAG 1080
QAGGAGGAGGAGGAGGSVSGDGGAGGNGGAGGNGGVGASGGAGARGANGIDSIGGTGGAG
Sbjct 1021 QAGGAGGAGGAGGAGGSVSGDGGAGGNGGAGGNGGVGASGGAGARGANGIDSIGGTGGAG 1080
Query 1081 GGGGDGGAGGVGGHGGDGGVGGAAPSGTVGSHGTGGVGGDGGLGGAGGVGGAGGNGGIGI 1140
GGGGDGGAGGVGGHGGDGGVGGAAPSGTVGSHGTGGVGGDGGLGGAGGVGGAGGNGGIGI
Sbjct 1081 GGGGDGGAGGVGGHGGDGGVGGAAPSGTVGSHGTGGVGGDGGLGGAGGVGGAGGNGGIGI 1140
Query 1141 TVGGAGGAGGNGGDPGAGGRGGLGGDSGNGTSAANGVDASKHGPLTGGDGGVGGNGAKAA 1200
TVGGAGGAGGNGGDPGAGGRGGLGGDSGNGTSAANGVDASKHGPLTGGDGGVGGNGAKAA
Sbjct 1141 TVGGAGGAGGNGGDPGAGGRGGLGGDSGNGTSAANGVDASKHGPLTGGDGGVGGNGAKAA 1200
Query 1201 AAGGDGGQGGDGGNAGLFGDGGAGGDGADGTAAEALGGDGGAGGAGGKGGDAGDIGDGGD 1260
AAGGDGGQGGDGGNAGLFGDGGAGGDGADGTAAEALGGDGGAGGAGGKGGDAGDIGDGGD
Sbjct 1201 AAGGDGGQGGDGGNAGLFGDGGAGGDGADGTAAEALGGDGGAGGAGGKGGDAGDIGDGGD 1260
Query 1261 GGKGGDGAHGALGGLTVAGGNGGAGGAGGAGGAGGAFLGDGGNGGAGGQGGAGRGGSPGG 1320
GGKGGDGAHGALGGLTVAGGNGGAGGAGGAGGAGGAFLGDGGNGGAGGQGGAGRGGSPGG
Sbjct 1261 GGKGGDGAHGALGGLTVAGGNGGAGGAGGAGGAGGAFLGDGGNGGAGGQGGAGRGGSPGG 1320
Query 1321 GGGVGGHGGAGGDAGMNGGGGTGGQGGNGAAGGAGWSPDSDLKGFDGFDGGSGGAGGDGG 1380
GGGVGGHGGAGGDAGMNGGGGTGGQGGNGAAGGAGWSPDSDLKGFDGFDGGSGGAGGDGG
Sbjct 1321 GGGVGGHGGAGGDAGMNGGGGTGGQGGNGAAGGAGWSPDSDLKGFDGFDGGSGGAGGDGG 1380
Query 1381 AGGAGGTQTGDGGDGGAGGLGGAGGVGGNGVDGFDINETTGRDGGDGGDGGYGGWGGAGG 1440
AGGAGGTQTGDGGDGGAGGLGGAGGVGGNGVDGFDINETTGRDGGDGGDGGYGGWGGAGG
Sbjct 1381 AGGAGGTQTGDGGDGGAGGLGGAGGVGGNGVDGFDINETTGRDGGDGGDGGYGGWGGAGG 1440
Query 1441 NGGAGGSAPAGEVGNRGVGGDGGDGGSGGDAGNGGLGGDGFTYLADFDGEPGGDGGDGGD 1500
NGGAGGSAPAGEVGNRGVGGDGGDGGSGGDAGNGGLGGDGFTYLADFDGEPGGDGGDGGD
Sbjct 1441 NGGAGGSAPAGEVGNRGVGGDGGDGGSGGDAGNGGLGGDGFTYLADFDGEPGGDGGDGGD 1500
Query 1501 GGWGRPGGQGGFGSTSGAHGKAGFGAPGGDGGDGGNGGHGGDGNGSFADAGDGGPGGNGG 1560
GGWGRPGGQGGFGSTSGAHGKAGFGAPGGDGGDGGNGGHGGDGNGSFADAGDGGPGGNGG
Sbjct 1501 GGWGRPGGQGGFGSTSGAHGKAGFGAPGGDGGDGGNGGHGGDGNGSFADAGDGGPGGNGG 1560
Query 1561 NGGLGGAGRDGGAPGGDGGDGGTGGSGGFGAPPPRSIGGGDGGDGGRGGDGGRGAGGLTS 1620
NGGLGGAGRDGGAPGGDGGDGGTGGSGGFGAPPPRSIGGGDGGDGGRGGDGGRGAGGLTS
Sbjct 1561 NGGLGGAGRDGGAPGGDGGDGGTGGSGGFGAPPPRSIGGGDGGDGGRGGDGGRGAGGLTS 1620
Query 1621 GGVGSSGESGGSGNGRGDPGSGGSGGEGGEGGPSISVNVT 1660
GGVGSSGESGGSGNGRGDPGSGGSGGEGGEGGPSISVNVT
Sbjct 1621 GGVGSSGESGGSGNGRGDPGSGGSGGEGGEGGPSISVNVT 1660
>gi|15842017|ref|NP_337054.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13882294|gb|AAK46868.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=1665
Score = 2598 bits (6733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1660/1660 (100%), Positives = 1660/1660 (100%), Gaps = 0/1660 (0%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ
Sbjct 6 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 65
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD
Sbjct 66 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 125
Query 121 GAHGTAPGQPGGAGGLLFGNGGNGAAGAVGQVGGAGGAAGLFGIGGAGGAGGAGAPGGTG 180
GAHGTAPGQPGGAGGLLFGNGGNGAAGAVGQVGGAGGAAGLFGIGGAGGAGGAGAPGGTG
Sbjct 126 GAHGTAPGQPGGAGGLLFGNGGNGAAGAVGQVGGAGGAAGLFGIGGAGGAGGAGAPGGTG 185
Query 181 GTGGWLAGGGGVGGMGGAGGGAGGAGGNAGLFGNGGAGGAGGAGGGAGGAGGNAGWFGHG 240
GTGGWLAGGGGVGGMGGAGGGAGGAGGNAGLFGNGGAGGAGGAGGGAGGAGGNAGWFGHG
Sbjct 186 GTGGWLAGGGGVGGMGGAGGGAGGAGGNAGLFGNGGAGGAGGAGGGAGGAGGNAGWFGHG 245
Query 241 GAGGVGGVGAAGANGATPGQDGAAGVAGSDDGAGGDGLAGSDGGDGGAGGVGGNGGRGGW 300
GAGGVGGVGAAGANGATPGQDGAAGVAGSDDGAGGDGLAGSDGGDGGAGGVGGNGGRGGW
Sbjct 246 GAGGVGGVGAAGANGATPGQDGAAGVAGSDDGAGGDGLAGSDGGDGGAGGVGGNGGRGGW 305
Query 301 LLGNGGAGGVGGVGGAGGAGAAGGAGGAGATGINGPAGISAAGGDGGAGGNGGAGGNGGV 360
LLGNGGAGGVGGVGGAGGAGAAGGAGGAGATGINGPAGISAAGGDGGAGGNGGAGGNGGV
Sbjct 306 LLGNGGAGGVGGVGGAGGAGAAGGAGGAGATGINGPAGISAAGGDGGAGGNGGAGGNGGV 365
Query 361 GGAGGAGGSAGLLGYVGRAGDGGAGGGGGLGGAPGDGGAGGNGGSWLAAGDGGAGGHGGD 420
GGAGGAGGSAGLLGYVGRAGDGGAGGGGGLGGAPGDGGAGGNGGSWLAAGDGGAGGHGGD
Sbjct 366 GGAGGAGGSAGLLGYVGRAGDGGAGGGGGLGGAPGDGGAGGNGGSWLAAGDGGAGGHGGD 425
Query 421 PGLGGAGGAGGASGGAGARAGANGLAAGNDGPVSGGNGGKGGNGAHAPVAGGHGGNGGAG 480
PGLGGAGGAGGASGGAGARAGANGLAAGNDGPVSGGNGGKGGNGAHAPVAGGHGGNGGAG
Sbjct 426 PGLGGAGGAGGASGGAGARAGANGLAAGNDGPVSGGNGGKGGNGAHAPVAGGHGGNGGAG 485
Query 481 GNGGLVGDGGAGGHGGDGAAGAGYADMTAIFLGSSGTPGEDGGNGGAGGAGGAGGAHAGD 540
GNGGLVGDGGAGGHGGDGAAGAGYADMTAIFLGSSGTPGEDGGNGGAGGAGGAGGAHAGD
Sbjct 486 GNGGLVGDGGAGGHGGDGAAGAGYADMTAIFLGSSGTPGEDGGNGGAGGAGGAGGAHAGD 545
Query 541 GGAGGAGGNGGAGGAGGNGAHGFNAVLVSDGGNGGDGGAGGRGGDGGAGGAGGDAPAGRA 600
GGAGGAGGNGGAGGAGGNGAHGFNAVLVSDGGNGGDGGAGGRGGDGGAGGAGGDAPAGRA
Sbjct 546 GGAGGAGGNGGAGGAGGNGAHGFNAVLVSDGGNGGDGGAGGRGGDGGAGGAGGDAPAGRA 605
Query 601 GSQGVGGDGGAGGAGGAPGNGGSGGRGDMAFKDGDGGAGGDGGDPGAGGKGGAGGAGATE 660
GSQGVGGDGGAGGAGGAPGNGGSGGRGDMAFKDGDGGAGGDGGDPGAGGKGGAGGAGATE
Sbjct 606 GSQGVGGDGGAGGAGGAPGNGGSGGRGDMAFKDGDGGAGGDGGDPGAGGKGGAGGAGATE 665
Query 661 GVTGATGATVHSGGNGGKGGNGADATVAGANGGKGGAGGNGGLVGDGGAGGDGGSGAAGA 720
GVTGATGATVHSGGNGGKGGNGADATVAGANGGKGGAGGNGGLVGDGGAGGDGGSGAAGA
Sbjct 666 GVTGATGATVHSGGNGGKGGNGADATVAGANGGKGGAGGNGGLVGDGGAGGDGGSGAAGA 725
Query 721 NGANVGEDGADGTLSGQPGEGSEANGGQGGVGGGGAGGAGGDGGAGSSALGSGGNGGRGD 780
NGANVGEDGADGTLSGQPGEGSEANGGQGGVGGGGAGGAGGDGGAGSSALGSGGNGGRGD
Sbjct 726 NGANVGEDGADGTLSGQPGEGSEANGGQGGVGGGGAGGAGGDGGAGSSALGSGGNGGRGD 785
Query 781 AGQAGGAGGAGGAGGAGGSVSGDGGPGGKGGAGGAGGAGASGGGGGKGASGADSAEAVGG 840
AGQAGGAGGAGGAGGAGGSVSGDGGPGGKGGAGGAGGAGASGGGGGKGASGADSAEAVGG
Sbjct 786 AGQAGGAGGAGGAGGAGGSVSGDGGPGGKGGAGGAGGAGASGGGGGKGASGADSAEAVGG 845
Query 841 AGGKGGDGGVGGVGGDGGPGGDGGAGGAAPAGQVGSHGVGGVGGDGGLGGAGGNGGDGGH 900
AGGKGGDGGVGGVGGDGGPGGDGGAGGAAPAGQVGSHGVGGVGGDGGLGGAGGNGGDGGH
Sbjct 846 AGGKGGDGGVGGVGGDGGPGGDGGAGGAAPAGQVGSHGVGGVGGDGGLGGAGGNGGDGGH 905
Query 901 GSDGGDGGDGGDPGAGGLGGLGGDSGNGTRAASGVDASDHGPGSGGNGGNGGNGAQASVA 960
GSDGGDGGDGGDPGAGGLGGLGGDSGNGTRAASGVDASDHGPGSGGNGGNGGNGAQASVA
Sbjct 906 GSDGGDGGDGGDPGAGGLGGLGGDSGNGTRAASGVDASDHGPGSGGNGGNGGNGAQASVA 965
Query 961 GGAGGNGGDGGNAGRVGDGGAGGNGGDGAAGANGANSGAPGSDALALGQPGGNGGQGDAG 1020
GGAGGNGGDGGNAGRVGDGGAGGNGGDGAAGANGANSGAPGSDALALGQPGGNGGQGDAG
Sbjct 966 GGAGGNGGDGGNAGRVGDGGAGGNGGDGAAGANGANSGAPGSDALALGQPGGNGGQGDAG 1025
Query 1021 QAGGAGGAGGAGGAGGSVSGDGGAGGNGGAGGNGGVGASGGAGARGANGIDSIGGTGGAG 1080
QAGGAGGAGGAGGAGGSVSGDGGAGGNGGAGGNGGVGASGGAGARGANGIDSIGGTGGAG
Sbjct 1026 QAGGAGGAGGAGGAGGSVSGDGGAGGNGGAGGNGGVGASGGAGARGANGIDSIGGTGGAG 1085
Query 1081 GGGGDGGAGGVGGHGGDGGVGGAAPSGTVGSHGTGGVGGDGGLGGAGGVGGAGGNGGIGI 1140
GGGGDGGAGGVGGHGGDGGVGGAAPSGTVGSHGTGGVGGDGGLGGAGGVGGAGGNGGIGI
Sbjct 1086 GGGGDGGAGGVGGHGGDGGVGGAAPSGTVGSHGTGGVGGDGGLGGAGGVGGAGGNGGIGI 1145
Query 1141 TVGGAGGAGGNGGDPGAGGRGGLGGDSGNGTSAANGVDASKHGPLTGGDGGVGGNGAKAA 1200
TVGGAGGAGGNGGDPGAGGRGGLGGDSGNGTSAANGVDASKHGPLTGGDGGVGGNGAKAA
Sbjct 1146 TVGGAGGAGGNGGDPGAGGRGGLGGDSGNGTSAANGVDASKHGPLTGGDGGVGGNGAKAA 1205
Query 1201 AAGGDGGQGGDGGNAGLFGDGGAGGDGADGTAAEALGGDGGAGGAGGKGGDAGDIGDGGD 1260
AAGGDGGQGGDGGNAGLFGDGGAGGDGADGTAAEALGGDGGAGGAGGKGGDAGDIGDGGD
Sbjct 1206 AAGGDGGQGGDGGNAGLFGDGGAGGDGADGTAAEALGGDGGAGGAGGKGGDAGDIGDGGD 1265
Query 1261 GGKGGDGAHGALGGLTVAGGNGGAGGAGGAGGAGGAFLGDGGNGGAGGQGGAGRGGSPGG 1320
GGKGGDGAHGALGGLTVAGGNGGAGGAGGAGGAGGAFLGDGGNGGAGGQGGAGRGGSPGG
Sbjct 1266 GGKGGDGAHGALGGLTVAGGNGGAGGAGGAGGAGGAFLGDGGNGGAGGQGGAGRGGSPGG 1325
Query 1321 GGGVGGHGGAGGDAGMNGGGGTGGQGGNGAAGGAGWSPDSDLKGFDGFDGGSGGAGGDGG 1380
GGGVGGHGGAGGDAGMNGGGGTGGQGGNGAAGGAGWSPDSDLKGFDGFDGGSGGAGGDGG
Sbjct 1326 GGGVGGHGGAGGDAGMNGGGGTGGQGGNGAAGGAGWSPDSDLKGFDGFDGGSGGAGGDGG 1385
Query 1381 AGGAGGTQTGDGGDGGAGGLGGAGGVGGNGVDGFDINETTGRDGGDGGDGGYGGWGGAGG 1440
AGGAGGTQTGDGGDGGAGGLGGAGGVGGNGVDGFDINETTGRDGGDGGDGGYGGWGGAGG
Sbjct 1386 AGGAGGTQTGDGGDGGAGGLGGAGGVGGNGVDGFDINETTGRDGGDGGDGGYGGWGGAGG 1445
Query 1441 NGGAGGSAPAGEVGNRGVGGDGGDGGSGGDAGNGGLGGDGFTYLADFDGEPGGDGGDGGD 1500
NGGAGGSAPAGEVGNRGVGGDGGDGGSGGDAGNGGLGGDGFTYLADFDGEPGGDGGDGGD
Sbjct 1446 NGGAGGSAPAGEVGNRGVGGDGGDGGSGGDAGNGGLGGDGFTYLADFDGEPGGDGGDGGD 1505
Query 1501 GGWGRPGGQGGFGSTSGAHGKAGFGAPGGDGGDGGNGGHGGDGNGSFADAGDGGPGGNGG 1560
GGWGRPGGQGGFGSTSGAHGKAGFGAPGGDGGDGGNGGHGGDGNGSFADAGDGGPGGNGG
Sbjct 1506 GGWGRPGGQGGFGSTSGAHGKAGFGAPGGDGGDGGNGGHGGDGNGSFADAGDGGPGGNGG 1565
Query 1561 NGGLGGAGRDGGAPGGDGGDGGTGGSGGFGAPPPRSIGGGDGGDGGRGGDGGRGAGGLTS 1620
NGGLGGAGRDGGAPGGDGGDGGTGGSGGFGAPPPRSIGGGDGGDGGRGGDGGRGAGGLTS
Sbjct 1566 NGGLGGAGRDGGAPGGDGGDGGTGGSGGFGAPPPRSIGGGDGGDGGRGGDGGRGAGGLTS 1625
Query 1621 GGVGSSGESGGSGNGRGDPGSGGSGGEGGEGGPSISVNVT 1660
GGVGSSGESGGSGNGRGDPGSGGSGGEGGEGGPSISVNVT
Sbjct 1626 GGVGSSGESGGSGNGRGDPGSGGSGGEGGEGGPSISVNVT 1665
>gi|340627504|ref|YP_004745956.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340005694|emb|CCC44860.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=1660
Score = 2570 bits (6661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1649/1660 (99%), Positives = 1651/1660 (99%), Gaps = 0/1660 (0%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMR VLGAVNAPTQTLLGRPLIGD
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRAVLGAVNAPTQTLLGRPLIGD 120
Query 121 GAHGTAPGQPGGAGGLLFGNGGNGAAGAVGQVGGAGGAAGLFGIGGAGGAGGAGAPGGTG 180
GAHGTAPGQPGGAGGLLFGNGGNGAAGAVGQVGGAGGAAGLFGIGGAGGAGGAGAPGGTG
Sbjct 121 GAHGTAPGQPGGAGGLLFGNGGNGAAGAVGQVGGAGGAAGLFGIGGAGGAGGAGAPGGTG 180
Query 181 GTGGWLAGGGGVGGMGGAGGGAGGAGGNAGLFGNGGAGGAGGAGGGAGGAGGNAGWFGHG 240
GTGGWLAGGGGVGGMGGAGGGAGGAGGNAGLFGNGGAGGAGGAGGGAGGAGGNAGWFGHG
Sbjct 181 GTGGWLAGGGGVGGMGGAGGGAGGAGGNAGLFGNGGAGGAGGAGGGAGGAGGNAGWFGHG 240
Query 241 GAGGVGGVGAAGANGATPGQDGAAGVAGSDDGAGGDGLAGSDGGDGGAGGVGGNGGRGGW 300
GAGGVGGVGAAGANGATPGQDGAAGVAG DGAGGDGLAGSDGGDGGAGGVGGNGGRGGW
Sbjct 241 GAGGVGGVGAAGANGATPGQDGAAGVAGVHDGAGGDGLAGSDGGDGGAGGVGGNGGRGGW 300
Query 301 LLGNGGAGGVGGVGGAGGAGAAGGAGGAGATGINGPAGISAAGGDGGAGGNGGAGGNGGV 360
LLGNGGAGGVGGVGGAGGAGAAGGAGGAGATGINGPAGISAAGGDGGAGGNGGAGGNGGV
Sbjct 301 LLGNGGAGGVGGVGGAGGAGAAGGAGGAGATGINGPAGISAAGGDGGAGGNGGAGGNGGV 360
Query 361 GGAGGAGGSAGLLGYVGRAGDGGAGGGGGLGGAPGDGGAGGNGGSWLAAGDGGAGGHGGD 420
GGAGGAGGSAGLLG+VGRAGDGGAGGGGGLGGAPGDGGAGGNGGSWL AGDGGAGGHGGD
Sbjct 361 GGAGGAGGSAGLLGHVGRAGDGGAGGGGGLGGAPGDGGAGGNGGSWLTAGDGGAGGHGGD 420
Query 421 PGLGGAGGAGGASGGAGARAGANGLAAGNDGPVSGGNGGKGGNGAHAPVAGGHGGNGGAG 480
PGLGGAGGAGGASGGAGARAGANGLAAGNDGPVSGGNGGKGGNGAHAPVAGGHGGNGGAG
Sbjct 421 PGLGGAGGAGGASGGAGARAGANGLAAGNDGPVSGGNGGKGGNGAHAPVAGGHGGNGGAG 480
Query 481 GNGGLVGDGGAGGHGGDGAAGAGYADMTAIFLGSSGTPGEDGGNGGAGGAGGAGGAHAGD 540
GNGGLVGDGGAGGHGGDGAAGAGYADMTAIF GSSGTPGEDGGNGGAGGAGGAGGAHAGD
Sbjct 481 GNGGLVGDGGAGGHGGDGAAGAGYADMTAIFPGSSGTPGEDGGNGGAGGAGGAGGAHAGD 540
Query 541 GGAGGAGGNGGAGGAGGNGAHGFNAVLVSDGGNGGDGGAGGRGGDGGAGGAGGDAPAGRA 600
GGAGGAGGNGGAGGAGGNGAHGFNAVLVSDGGNGGDGGAGGRGGDGGAGGAGGDAPAGRA
Sbjct 541 GGAGGAGGNGGAGGAGGNGAHGFNAVLVSDGGNGGDGGAGGRGGDGGAGGAGGDAPAGRA 600
Query 601 GSQGVGGDGGAGGAGGAPGNGGSGGRGDMAFKDGDGGAGGDGGDPGAGGKGGAGGAGATE 660
GSQGVGGDGGAGGAGGAPGNGGSGGRGDMAFKDGDGGAGGDGGDPGAGGKGGAGGAGATE
Sbjct 601 GSQGVGGDGGAGGAGGAPGNGGSGGRGDMAFKDGDGGAGGDGGDPGAGGKGGAGGAGATE 660
Query 661 GVTGATGATVHSGGNGGKGGNGADATVAGANGGKGGAGGNGGLVGDGGAGGDGGSGAAGA 720
GVTGATGATVHSGGNGGKGGNGADATVAGANGGKGGAGGNGGLVGDGGAGGDGGSGAAGA
Sbjct 661 GVTGATGATVHSGGNGGKGGNGADATVAGANGGKGGAGGNGGLVGDGGAGGDGGSGAAGA 720
Query 721 NGANVGEDGADGTLSGQPGEGSEANGGQGGVGGGGAGGAGGDGGAGSSALGSGGNGGRGD 780
NGANVGEDGADGTLSGQPGEGSEANGGQGGVGGGG GGAGGDGGAGSSALGSGGNGGRGD
Sbjct 721 NGANVGEDGADGTLSGQPGEGSEANGGQGGVGGGGTGGAGGDGGAGSSALGSGGNGGRGD 780
Query 781 AGQAGGAGGAGGAGGAGGSVSGDGGPGGKGGAGGAGGAGASGGGGGKGASGADSAEAVGG 840
AGQAGGAGGAGGAGGAGGSVSGDGGPGGKGGAGGAGGAGASGGGGGKGASGADSAEAVGG
Sbjct 781 AGQAGGAGGAGGAGGAGGSVSGDGGPGGKGGAGGAGGAGASGGGGGKGASGADSAEAVGG 840
Query 841 AGGKGGDGGVGGVGGDGGPGGDGGAGGAAPAGQVGSHGVGGVGGDGGLGGAGGNGGDGGH 900
AGGKGGDGG GGVGGDGGPGGDGGAGGAA AGQVGSHGVGGVGGDGGLGGAGGNGGDGGH
Sbjct 841 AGGKGGDGGDGGVGGDGGPGGDGGAGGAALAGQVGSHGVGGVGGDGGLGGAGGNGGDGGH 900
Query 901 GSDGGDGGDGGDPGAGGLGGLGGDSGNGTRAASGVDASDHGPGSGGNGGNGGNGAQASVA 960
GSDGGDGGDGGDPGAGGLGGLGGDSGNGTRAASGVDASDHGPGSGGNGGNGGNGAQASVA
Sbjct 901 GSDGGDGGDGGDPGAGGLGGLGGDSGNGTRAASGVDASDHGPGSGGNGGNGGNGAQASVA 960
Query 961 GGAGGNGGDGGNAGRVGDGGAGGNGGDGAAGANGANSGAPGSDALALGQPGGNGGQGDAG 1020
GGAGGNGGDGGNAGRVGDGGAGGNGGDGAAGANGANSGAPGSDALALGQPGGNGGQGDAG
Sbjct 961 GGAGGNGGDGGNAGRVGDGGAGGNGGDGAAGANGANSGAPGSDALALGQPGGNGGQGDAG 1020
Query 1021 QAGGAGGAGGAGGAGGSVSGDGGAGGNGGAGGNGGVGASGGAGARGANGIDSIGGTGGAG 1080
QAGGAGGAGGAGGAGGSVSGDGGAGGNGGAGGNGGVGASGGAGARGANGIDSIGGTGGAG
Sbjct 1021 QAGGAGGAGGAGGAGGSVSGDGGAGGNGGAGGNGGVGASGGAGARGANGIDSIGGTGGAG 1080
Query 1081 GGGGDGGAGGVGGHGGDGGVGGAAPSGTVGSHGTGGVGGDGGLGGAGGVGGAGGNGGIGI 1140
GGGGDGGAGGVGGHGGDGGVGGAAPSGTVGSHGTGGVGG GGLGGAGGVGGAGGNGGIGI
Sbjct 1081 GGGGDGGAGGVGGHGGDGGVGGAAPSGTVGSHGTGGVGGAGGLGGAGGVGGAGGNGGIGI 1140
Query 1141 TVGGAGGAGGNGGDPGAGGRGGLGGDSGNGTSAANGVDASKHGPLTGGDGGVGGNGAKAA 1200
TVGGAGGAGGNGGDPGAGGRGGLGGDSGNGTSAANGVDASKHGPLTGGDGGVGGNGAKAA
Sbjct 1141 TVGGAGGAGGNGGDPGAGGRGGLGGDSGNGTSAANGVDASKHGPLTGGDGGVGGNGAKAA 1200
Query 1201 AAGGDGGQGGDGGNAGLFGDGGAGGDGADGTAAEALGGDGGAGGAGGKGGDAGDIGDGGD 1260
AAGGDGGQGGDGGNAGLFGDGGAGGDGADGTAAEALGGDGGAGGAGGKGGDAGDIGDGGD
Sbjct 1201 AAGGDGGQGGDGGNAGLFGDGGAGGDGADGTAAEALGGDGGAGGAGGKGGDAGDIGDGGD 1260
Query 1261 GGKGGDGAHGALGGLTVAGGNGGAGGAGGAGGAGGAFLGDGGNGGAGGQGGAGRGGSPGG 1320
GGKGGDGAHGALGGLTVAGGNGGAGGAGGAGGAGGAFLGDGGNGGAGGQGGAGRGGSPGG
Sbjct 1261 GGKGGDGAHGALGGLTVAGGNGGAGGAGGAGGAGGAFLGDGGNGGAGGQGGAGRGGSPGG 1320
Query 1321 GGGVGGHGGAGGDAGMNGGGGTGGQGGNGAAGGAGWSPDSDLKGFDGFDGGSGGAGGDGG 1380
GGGVGGHGGAGGDAGMNGGGGTGGQGGNGAAGGAGWSPDSDLKGFDGFDGGSGGAGGDGG
Sbjct 1321 GGGVGGHGGAGGDAGMNGGGGTGGQGGNGAAGGAGWSPDSDLKGFDGFDGGSGGAGGDGG 1380
Query 1381 AGGAGGTQTGDGGDGGAGGLGGAGGVGGNGVDGFDINETTGRDGGDGGDGGYGGWGGAGG 1440
AGGAGGTQTGDGGDGGAGGLGGAGGVGGNGVDGFDINETTGRDGGDGGDGGYGGWGGAGG
Sbjct 1381 AGGAGGTQTGDGGDGGAGGLGGAGGVGGNGVDGFDINETTGRDGGDGGDGGYGGWGGAGG 1440
Query 1441 NGGAGGSAPAGEVGNRGVGGDGGDGGSGGDAGNGGLGGDGFTYLADFDGEPGGDGGDGGD 1500
NGGAGGSAPAGEVGNRGVGGDGGDGGSGGDAGNGGLGGDGFTYLADFDGEPGGDGGDGGD
Sbjct 1441 NGGAGGSAPAGEVGNRGVGGDGGDGGSGGDAGNGGLGGDGFTYLADFDGEPGGDGGDGGD 1500
Query 1501 GGWGRPGGQGGFGSTSGAHGKAGFGAPGGDGGDGGNGGHGGDGNGSFADAGDGGPGGNGG 1560
GGWGRPGGQGGFGSTSGAHGKAGFGAPGGDGGDGGNGGHGGDGNGSFADAGDGGPGGNGG
Sbjct 1501 GGWGRPGGQGGFGSTSGAHGKAGFGAPGGDGGDGGNGGHGGDGNGSFADAGDGGPGGNGG 1560
Query 1561 NGGLGGAGRDGGAPGGDGGDGGTGGSGGFGAPPPRSIGGGDGGDGGRGGDGGRGAGGLTS 1620
NGGLGGAGRDGGAPGGDGGDGGTGGSGGFGAPPPRS+GGGDGGDGGRGGDGGRGAGGLTS
Sbjct 1561 NGGLGGAGRDGGAPGGDGGDGGTGGSGGFGAPPPRSVGGGDGGDGGRGGDGGRGAGGLTS 1620
Query 1621 GGVGSSGESGGSGNGRGDPGSGGSGGEGGEGGPSISVNVT 1660
GGVGSSGESGGSGNGRGDPGSGGSGGEGGEGGPSISVNVT
Sbjct 1621 GGVGSSGESGGSGNGRGDPGSGGSGGEGGEGGPSISVNVT 1660
>gi|339298994|gb|AEJ51104.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180]
Length=1657
Score = 2568 bits (6657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1646/1657 (99%), Positives = 1649/1657 (99%), Gaps = 0/1657 (0%)
Query 4 VIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQEYQ 63
+IATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQEYQ
Sbjct 1 MIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQEYQ 60
Query 64 ALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGDGAH 123
ALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGDGAH
Sbjct 61 ALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGDGAH 120
Query 124 GTAPGQPGGAGGLLFGNGGNGAAGAVGQVGGAGGAAGLFGIGGAGGAGGAGAPGGTGGTG 183
GTAPGQPGGAGGLLFGNGGNGAAGAVGQVGGAGGAAGLFGIGGAGGAGGAGAPGGTGGTG
Sbjct 121 GTAPGQPGGAGGLLFGNGGNGAAGAVGQVGGAGGAAGLFGIGGAGGAGGAGAPGGTGGTG 180
Query 184 GWLAGGGGVGGMGGAGGGAGGAGGNAGLFGNGGAGGAGGAGGGAGGAGGNAGWFGHGGAG 243
GWLAGGGGVGGMGGAGGGAGGAGGNAGLFGNGGAGGAGGAGGGAGGAGGNAGWFGHGGAG
Sbjct 181 GWLAGGGGVGGMGGAGGGAGGAGGNAGLFGNGGAGGAGGAGGGAGGAGGNAGWFGHGGAG 240
Query 244 GVGGVGAAGANGATPGQDGAAGVAGSDDGAGGDGLAGSDGGDGGAGGVGGNGGRGGWLLG 303
GVGGVGAAGANGATPGQDGAAGVAGSDDGAGGDGLAGSDGGDGGAGGVGGNGGRGGWLLG
Sbjct 241 GVGGVGAAGANGATPGQDGAAGVAGSDDGAGGDGLAGSDGGDGGAGGVGGNGGRGGWLLG 300
Query 304 NGGAGGVGGVGGAGGAGAAGGAGGAGATGINGPAGISAAGGDGGAGGNGGAGGNGGVGGA 363
NGGAGGVGGVGGAGG GAAGGAGGAGATGINGPAGISAAGGDGGAGGNGGAGGNGGVGGA
Sbjct 301 NGGAGGVGGVGGAGGTGAAGGAGGAGATGINGPAGISAAGGDGGAGGNGGAGGNGGVGGA 360
Query 364 GGAGGSAGLLGYVGRAGDGGAGGGGGLGGAPGDGGAGGNGGSWLAAGDGGAGGHGGDPGL 423
GGAGGSAGLLGYVGRAGDGGAGGGGGLGGAPGDGGAGGNGGSWLAAGDGGAGGHGGDPGL
Sbjct 361 GGAGGSAGLLGYVGRAGDGGAGGGGGLGGAPGDGGAGGNGGSWLAAGDGGAGGHGGDPGL 420
Query 424 GGAGGAGGASGGAGARAGANGLAAGNDGPVSGGNGGKGGNGAHAPVAGGHGGNGGAGGNG 483
GGAGGAGGASGGAGARAGANGLAAGNDGPVSGGNGGKGGNGAHAPVAGGHGGNGGAGGNG
Sbjct 421 GGAGGAGGASGGAGARAGANGLAAGNDGPVSGGNGGKGGNGAHAPVAGGHGGNGGAGGNG 480
Query 484 GLVGDGGAGGHGGDGAAGAGYADMTAIFLGSSGTPGEDGGNGGAGGAGGAGGAHAGDGGA 543
GLVGDGGAGGHGGDGAAGAGYADMTAIFLGSSGTPGEDGGNGGAGGAGGAGGAHAGDGGA
Sbjct 481 GLVGDGGAGGHGGDGAAGAGYADMTAIFLGSSGTPGEDGGNGGAGGAGGAGGAHAGDGGA 540
Query 544 GGAGGNGGAGGAGGNGAHGFNAVLVSDGGNGGDGGAGGRGGDGGAGGAGGDAPAGRAGSQ 603
GGAGGNGGAGGAGGNGAHGFNAVLVSDGGNGGDGGAGGRGGDGGAGGAGGDAPAGRAGSQ
Sbjct 541 GGAGGNGGAGGAGGNGAHGFNAVLVSDGGNGGDGGAGGRGGDGGAGGAGGDAPAGRAGSQ 600
Query 604 GVGGDGGAGGAGGAPGNGGSGGRGDMAFKDGDGGAGGDGGDPGAGGKGGAGGAGATEGVT 663
GVGGDGGAGGAGGAPGNGGSGGRGDMAFKDGDGGAGGDGGDPGAGGKGGAGGAGATEGVT
Sbjct 601 GVGGDGGAGGAGGAPGNGGSGGRGDMAFKDGDGGAGGDGGDPGAGGKGGAGGAGATEGVT 660
Query 664 GATGATVHSGGNGGKGGNGADATVAGANGGKGGAGGNGGLVGDGGAGGDGGSGAAGANGA 723
GATGATVHSGGNGGKGGNGADATVAGANGGKGGAGGNGGLVGDGGAGGDGGSGA GANGA
Sbjct 661 GATGATVHSGGNGGKGGNGADATVAGANGGKGGAGGNGGLVGDGGAGGDGGSGAGGANGA 720
Query 724 NVGEDGADGTLSGQPGEGSEANGGQGGVGGGGAGGAGGDGGAGSSALGSGGNGGRGDAGQ 783
NVGEDGADGTLSGQPGEGSEANGGQGGVGGGGAGGAGGDGGAGSSALGSGGNGGRGDAGQ
Sbjct 721 NVGEDGADGTLSGQPGEGSEANGGQGGVGGGGAGGAGGDGGAGSSALGSGGNGGRGDAGQ 780
Query 784 AGGAGGAGGAGGAGGSVSGDGGPGGKGGAGGAGGAGASGGGGGKGASGADSAEAVGGAGG 843
AGGAGGAGGAGGAGGSVSGDGGPGGKGGAGGAGGAGA GGGGGKGASGADSAEAVGGAGG
Sbjct 781 AGGAGGAGGAGGAGGSVSGDGGPGGKGGAGGAGGAGAGGGGGGKGASGADSAEAVGGAGG 840
Query 844 KGGDGGVGGVGGDGGPGGDGGAGGAAPAGQVGSHGVGGVGGDGGLGGAGGNGGDGGHGSD 903
KGGDGGVGGVGGDGGPGGDGGAGGAAPAGQVGSHGVGGVGGDGGLGGAGGNGGDGGHGSD
Sbjct 841 KGGDGGVGGVGGDGGPGGDGGAGGAAPAGQVGSHGVGGVGGDGGLGGAGGNGGDGGHGSD 900
Query 904 GGDGGDGGDPGAGGLGGLGGDSGNGTRAASGVDASDHGPGSGGNGGNGGNGAQASVAGGA 963
GGDGGDGGDPGAGGLGGLGGDSGNGTRAASGVDASDHGPGSGGNGGNGGNGAQASVAGGA
Sbjct 901 GGDGGDGGDPGAGGLGGLGGDSGNGTRAASGVDASDHGPGSGGNGGNGGNGAQASVAGGA 960
Query 964 GGNGGDGGNAGRVGDGGAGGNGGDGAAGANGANSGAPGSDALALGQPGGNGGQGDAGQAG 1023
GGNGGDGGNAGRVGDGGAGGNGGDGAAGANGANSGAPGSDALALGQPGGNGGQGDAGQAG
Sbjct 961 GGNGGDGGNAGRVGDGGAGGNGGDGAAGANGANSGAPGSDALALGQPGGNGGQGDAGQAG 1020
Query 1024 GAGGAGGAGGAGGSVSGDGGAGGNGGAGGNGGVGASGGAGARGANGIDSIGGTGGAGGGG 1083
GAGGAGGAGG GGS+SG GGAGGNGGAGGNGGVGASGGAGARGANGIDSIGGTGGAGGGG
Sbjct 1021 GAGGAGGAGGTGGSLSGAGGAGGNGGAGGNGGVGASGGAGARGANGIDSIGGTGGAGGGG 1080
Query 1084 GDGGAGGVGGHGGDGGVGGAAPSGTVGSHGTGGVGGDGGLGGAGGVGGAGGNGGIGITVG 1143
GDGGAGGVGGHGGDGGVGGAAPSGTVGSHGTGGVGGDGGLGGAGGVGGAGGNGGIGITVG
Sbjct 1081 GDGGAGGVGGHGGDGGVGGAAPSGTVGSHGTGGVGGDGGLGGAGGVGGAGGNGGIGITVG 1140
Query 1144 GAGGAGGNGGDPGAGGRGGLGGDSGNGTSAANGVDASKHGPLTGGDGGVGGNGAKAAAAG 1203
GAGGAGGNGGDPGAGGRGGLGGDSGNGTSAANGVDASKHGPLTGGDGG GGNGAKAA AG
Sbjct 1141 GAGGAGGNGGDPGAGGRGGLGGDSGNGTSAANGVDASKHGPLTGGDGGDGGNGAKAAGAG 1200
Query 1204 GDGGQGGDGGNAGLFGDGGAGGDGADGTAAEALGGDGGAGGAGGKGGDAGDIGDGGDGGK 1263
G+GGQGGDGGNAGLFGDGGAGGDGADGTAAEALGGDGGAGGAGGKGGDAGDIGDGGDGGK
Sbjct 1201 GNGGQGGDGGNAGLFGDGGAGGDGADGTAAEALGGDGGAGGAGGKGGDAGDIGDGGDGGK 1260
Query 1264 GGDGAHGALGGLTVAGGNGGAGGAGGAGGAGGAFLGDGGNGGAGGQGGAGRGGSPGGGGG 1323
GGDGAHGALGGLTVAGGNGGAGGAGGAGGAGGAFLGDGGNGGAGGQGGAGRGGSPGGGGG
Sbjct 1261 GGDGAHGALGGLTVAGGNGGAGGAGGAGGAGGAFLGDGGNGGAGGQGGAGRGGSPGGGGG 1320
Query 1324 VGGHGGAGGDAGMNGGGGTGGQGGNGAAGGAGWSPDSDLKGFDGFDGGSGGAGGDGGAGG 1383
VGGHGGAGGDAGMNGGGGTGGQGGNGAAGGAGWSPDSDLKGFDGFDGGSGGAGGDGGAGG
Sbjct 1321 VGGHGGAGGDAGMNGGGGTGGQGGNGAAGGAGWSPDSDLKGFDGFDGGSGGAGGDGGAGG 1380
Query 1384 AGGTQTGDGGDGGAGGLGGAGGVGGNGVDGFDINETTGRDGGDGGDGGYGGWGGAGGNGG 1443
AGGTQTGDGGDGGAG LGGAGGVGGNGVDGFDINETTGRDGGDGGDGGYGGWGGAGGNGG
Sbjct 1381 AGGTQTGDGGDGGAGDLGGAGGVGGNGVDGFDINETTGRDGGDGGDGGYGGWGGAGGNGG 1440
Query 1444 AGGSAPAGEVGNRGVGGDGGDGGSGGDAGNGGLGGDGFTYLADFDGEPGGDGGDGGDGGW 1503
AGGSAPAGEVGNRGVGGDGGDGGSGGDAGNGGLGGDGFTYLADFDGEPGGDGGDGGDGGW
Sbjct 1441 AGGSAPAGEVGNRGVGGDGGDGGSGGDAGNGGLGGDGFTYLADFDGEPGGDGGDGGDGGW 1500
Query 1504 GRPGGQGGFGSTSGAHGKAGFGAPGGDGGDGGNGGHGGDGNGSFADAGDGGPGGNGGNGG 1563
GRPGGQGGFGSTSGAHGKAGFGAPGGDGGDGGNGGHGGDGNGSFADAGDGGPGGNGGNGG
Sbjct 1501 GRPGGQGGFGSTSGAHGKAGFGAPGGDGGDGGNGGHGGDGNGSFADAGDGGPGGNGGNGG 1560
Query 1564 LGGAGRDGGAPGGDGGDGGTGGSGGFGAPPPRSIGGGDGGDGGRGGDGGRGAGGLTSGGV 1623
LGGAGRDGGAPGGDGGDGGTGGSGGFGAPPPRSIGGGDGGDGGRGGDGGRGAGGLTSGGV
Sbjct 1561 LGGAGRDGGAPGGDGGDGGTGGSGGFGAPPPRSIGGGDGGDGGRGGDGGRGAGGLTSGGV 1620
Query 1624 GSSGESGGSGNGRGDPGSGGSGGEGGEGGPSISVNVT 1660
GSSGESGGSGNGRGDPGSGGSGGEGGEGGPSISVNVT
Sbjct 1621 GSSGESGGSGNGRGDPGSGGSGGEGGEGGPSISVNVT 1657
>gi|31793670|ref|NP_856163.1| hypothetical protein Mb2518c [Mycobacterium bovis AF2122/97]
gi|31619263|emb|CAD97379.1| PE-PGRS FAMILY PROTEIN [FIRST PART] [Mycobacterium bovis AF2122/97]
Length=509
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
Query 121 GAHGT 125
GAHGT
Sbjct 121 GAHGT 125
>gi|339632516|ref|YP_004724158.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339331872|emb|CCC27575.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=1657
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
Query 121 GAHGT 125
GAHGT
Sbjct 121 GAHGT 125
>gi|344220317|gb|AEN00948.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=1644
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
Query 121 GAHGT 125
GAHGT
Sbjct 121 GAHGT 125
>gi|253798432|ref|YP_003031433.1| hypothetical protein TBMG_04024 [Mycobacterium tuberculosis KZN
1435]
gi|253319935|gb|ACT24538.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
1435]
gi|328458200|gb|AEB03623.1| hypothetical protein TBSG_01494 [Mycobacterium tuberculosis KZN
4207]
Length=1616
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
Query 121 GAHGT 125
GAHGT
Sbjct 121 GAHGT 125
>gi|289553720|ref|ZP_06442930.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis
KZN 605]
gi|289438352|gb|EFD20845.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis
KZN 605]
Length=1323
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ
Sbjct 6 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 65
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD
Sbjct 66 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 125
Query 121 GAHGT 125
GAHGT
Sbjct 126 GAHGT 130
>gi|121638372|ref|YP_978596.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224990866|ref|YP_002645553.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|121494020|emb|CAL72498.1| PE-PGRS family protein [first part] [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|224773979|dbj|BAH26785.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341602410|emb|CCC65086.1| PE-PGRS family protein [first part] [Mycobacterium bovis BCG
str. Moreau RDJ]
Length=475
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
Query 121 GAHGT 125
GAHGT
Sbjct 121 GAHGT 125
>gi|297732087|ref|ZP_06961205.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN R506]
Length=387
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ
Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD
Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
Query 121 GAHGT 125
GAHGT
Sbjct 121 GAHGT 125
>gi|294994403|ref|ZP_06800094.1| PE-PGRS family protein [Mycobacterium tuberculosis 210]
Length=710
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/122 (99%), Positives = 122/122 (100%), Gaps = 0/122 (0%)
Query 4 VIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQEYQ 63
+IATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQEYQ
Sbjct 1 MIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQEYQ 60
Query 64 ALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGDGAH 123
ALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGDGAH
Sbjct 61 ALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGDGAH 120
Query 124 GT 125
GT
Sbjct 121 GT 122
>gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|253319014|gb|ACT23617.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|328457295|gb|AEB02718.1| hypothetical protein TBSG_00589 [Mycobacterium tuberculosis KZN
4207]
gi|344218399|gb|AEM99029.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=1303
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 73/122 (60%), Positives = 88/122 (73%), Gaps = 3/122 (2%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
MS+VIATPEM+ TAA DLA+IGS ++AA+ AA +V+ A ADEVS +AALF HAQ
Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
EYQ +SAQ A FHD+FV TL+A A Y A E N + +L AVNAPTQ L GRPLIG+
Sbjct 60 EYQTVSAQVATFHDRFVQTLSATASSYVAAEAVNVE--QSLLAAVNAPTQALFGRPLIGN 117
Query 121 GA 122
GA
Sbjct 118 GA 119
>gi|183981221|ref|YP_001849512.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174547|gb|ACC39657.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1610
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/124 (59%), Positives = 95/124 (77%), Gaps = 0/124 (0%)
Query 3 YVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQEY 62
YV+A PE+++ AA DLA IGS + AA+A A PT V+AA ADEVS IA LF +A++Y
Sbjct 3 YVVAAPEILSVAASDLANIGSALQAANAAATTPTVSVLAAAADEVSEAIAELFGTYARDY 62
Query 63 QALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGDGA 122
QA+SAQAA FH +FV + A A WY+ATE+ANA+ ++ +LGAVNA T+ ++GRPLIG+GA
Sbjct 63 QAISAQAARFHAEFVQAVNADAEWYSATEVANASPLQTLLGAVNAQTEAMIGRPLIGNGA 122
Query 123 HGTA 126
GTA
Sbjct 123 DGTA 126
>gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobacterium tuberculosis CCDC5079]
Length=1330
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 73/122 (60%), Positives = 87/122 (72%), Gaps = 4/122 (3%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
MS VI TPE +A AA D+ARIGS + A++ AA TT V+AAGADEVSA IA LF +HA+
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGRP 116
EYQA+S Q AAFHD+F TL+AA Y + E NAA + VL A+NAPTQ LLGRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 117 LI 118
LI
Sbjct 122 LI 123
>gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340004656|emb|CCC43800.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=1006
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/122 (62%), Positives = 89/122 (73%), Gaps = 4/122 (3%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
MS VI TPE++A AA D+ARIGS AA++ AA TT V+AAGADEVSA IA LF +HA+
Sbjct 1 MSLVIVTPELVAAAASDVARIGSGFGAANSTAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGRP 116
EYQA+S Q AAFHD+FV TL+AA Y + E NAA + VL A+NAPTQ LLGRP
Sbjct 61 EYQAISTQVAAFHDRFVQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 117 LI 118
LI
Sbjct 121 LI 122
>gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339330873|emb|CCC26544.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=1389
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/122 (60%), Positives = 86/122 (71%), Gaps = 4/122 (3%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
MS VI PE +A AA D+ARIGS + A++ AA TT V+AAGADEVSA IA LF +HA+
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGRP 116
EYQA+S Q AAFHD+F TL+AA Y + E NAA + VL A+NAPTQ LLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 117 LI 118
LI
Sbjct 121 LI 122
>gi|121637380|ref|YP_977603.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224989855|ref|YP_002644542.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|121493027|emb|CAL71498.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224772968|dbj|BAH25774.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341601399|emb|CCC64072.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=1399
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/122 (60%), Positives = 86/122 (71%), Gaps = 4/122 (3%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
MS VI PE +A AA D+ARIGS + A++ AA TT V+AAGADEVSA IA LF +HA+
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGRP 116
EYQA+S Q AAFHD+F TL+AA Y + E NAA + VL A+NAPTQ LLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 117 LI 118
LI
Sbjct 121 LI 122
>gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31618234|emb|CAD96152.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=1408
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/122 (60%), Positives = 86/122 (71%), Gaps = 4/122 (3%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
MS VI PE +A AA D+ARIGS + A++ AA TT V+AAGADEVSA IA LF +HA+
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGRP 116
EYQA+S Q AAFHD+F TL+AA Y + E NAA + VL A+NAPTQ LLGRP
Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 117 LI 118
LI
Sbjct 121 LI 122
>gi|339298064|gb|AEJ50174.1| putative PE family protein [Mycobacterium tuberculosis CCDC5180]
Length=1330
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/122 (60%), Positives = 87/122 (72%), Gaps = 4/122 (3%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
MS VI TPE +A AA D+ARIGS + A++ AA TT V+AAGAD+VSA IA LF +HA+
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADDVSAAIATLFGSHAR 61
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGRP 116
EYQA+S Q AAFHD+F TL+AA Y + E NAA + VL A+NAPTQ LLGRP
Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121
Query 117 LI 118
LI
Sbjct 122 LI 123
>gi|183980462|ref|YP_001848753.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183173788|gb|ACC38898.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1134
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/125 (53%), Positives = 88/125 (71%), Gaps = 2/125 (1%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
M++V+ +PE MA+AA D+ RIG+ ++ +A AA PT V +A ADEVS IAALFS HA+
Sbjct 1 MTFVLVSPEAMASAAADIERIGALLTQGNAAAASPTINVASAAADEVSTAIAALFSQHAK 60
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
YQ L+A+ AA D+F T+ A+A Y + E NAA +LG +N PTQ LLGRPLIG+
Sbjct 61 TYQLLAAELAAIPDRFTKTVLASANSYASAEATNAA--DALLGVINTPTQALLGRPLIGN 118
Query 121 GAHGT 125
GA+GT
Sbjct 119 GANGT 123
>gi|121636496|ref|YP_976719.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|121492143|emb|CAL70608.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
Length=1303
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/122 (61%), Positives = 89/122 (73%), Gaps = 3/122 (2%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
MS+VIATPEM+ TAA DLA+IGS ++AA+ AA +V+ A ADEVS +AALF HAQ
Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
EYQ +SAQ A FHD+FV TL+AAA Y A E N + +L AVNAPTQ L GRPLIG+
Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVE--QSLLAAVNAPTQALFGRPLIGN 117
Query 121 GA 122
GA
Sbjct 118 GA 119
>gi|148660347|ref|YP_001281870.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|148504499|gb|ABQ72308.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=1306
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/122 (61%), Positives = 89/122 (73%), Gaps = 3/122 (2%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
MS+VIATPEM+ TAA DLA+IGS ++AA+ AA +V+ A ADEVS +AALF HAQ
Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
EYQ +SAQ A FHD+FV TL+AAA Y A E N + +L AVNAPTQ L GRPLIG+
Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVE--QSLLAAVNAPTQALFGRPLIGN 117
Query 121 GA 122
GA
Sbjct 118 GA 119
>gi|31791760|ref|NP_854253.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31617347|emb|CAD93455.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=1306
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/122 (61%), Positives = 89/122 (73%), Gaps = 3/122 (2%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
MS+VIATPEM+ TAA DLA+IGS ++AA+ AA +V+ A ADEVS +AALF HAQ
Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
EYQ +SAQ A FHD+FV TL+AAA Y A E N + +L AVNAPTQ L GRPLIG+
Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVE--QSLLAAVNAPTQALFGRPLIGN 117
Query 121 GA 122
GA
Sbjct 118 GA 119
>gi|57116755|ref|YP_177739.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|148821780|ref|YP_001286533.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|224988968|ref|YP_002643655.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
7 more sequence titles
Length=1306
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/122 (61%), Positives = 89/122 (73%), Gaps = 3/122 (2%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
MS+VIATPEM+ TAA DLA+IGS ++AA+ AA +V+ A ADEVS +AALF HAQ
Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
EYQ +SAQ A FHD+FV TL+AAA Y A E N + +L AVNAPTQ L GRPLIG+
Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVE--QSLLAAVNAPTQALFGRPLIGN 117
Query 121 GA 122
GA
Sbjct 118 GA 119
>gi|57116865|ref|YP_177812.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|7441217|pir||E70917 hypothetical glycine-rich protein Rv1450c - Mycobacterium tuberculosis
(strain H37RV)
gi|38490271|emb|CAE55390.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
Length=1329
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/131 (54%), Positives = 82/131 (63%), Gaps = 22/131 (16%)
Query 1 MSYVIATPEMMATAAFDLARIGSQV---------SAASAVAAMPTTEVVAAGADEVSAGI 51
MS VI PE +A AA D+ARIGS + S TT V+AAGADEVSA I
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGS---------TTSVLAAGADEVSAAI 51
Query 52 AALFSAHAQEYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNA 107
A LF +HA+EYQA+S Q AAFHD+F TL+AA Y + E NAA + VL A+NA
Sbjct 52 ATLFGSHAREYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNA 111
Query 108 PTQTLLGRPLI 118
PTQ LLGRPLI
Sbjct 112 PTQALLGRPLI 122
>gi|15839979|ref|NP_335016.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13880121|gb|AAK44830.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=1306
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/122 (61%), Positives = 89/122 (73%), Gaps = 3/122 (2%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
MS+VIATPEM+ TAA DLA+IGS ++AA+ AA +V+ A ADEVS +AALF HAQ
Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
EYQ +SAQ A FHD+FV TL+AAA Y A E N + +L AVNAPTQ L GRPLIG+
Sbjct 60 EYQTVSAQVATFHDRFVQTLSAAASSYVAAEAVNVE--QSLLAAVNAPTQALFGRPLIGN 117
Query 121 GA 122
GA
Sbjct 118 GA 119
>gi|253799501|ref|YP_003032502.1| hypothetical protein TBMG_02531 [Mycobacterium tuberculosis KZN
1435]
gi|253321004|gb|ACT25607.1| predicted protein [Mycobacterium tuberculosis KZN 1435]
gi|328459249|gb|AEB04672.1| hypothetical protein TBSG_02543 [Mycobacterium tuberculosis KZN
4207]
Length=1408
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/131 (55%), Positives = 83/131 (64%), Gaps = 22/131 (16%)
Query 1 MSYVIATPEMMATAAFDLARIGSQV---------SAASAVAAMPTTEVVAAGADEVSAGI 51
MS VI TPE +A AA D+ARIGS + S TT V+AAGADEVSA I
Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGAANAAAAGS---------TTSVLAAGADEVSAAI 52
Query 52 AALFSAHAQEYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNA 107
A LF +HA+EYQA+S Q AAFHD+F TL+AA Y + E NAA + VL A+NA
Sbjct 53 ATLFGSHAREYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNA 112
Query 108 PTQTLLGRPLI 118
PTQ LLGRPLI
Sbjct 113 PTQALLGRPLI 123
>gi|148822669|ref|YP_001287423.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|148721196|gb|ABR05821.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|344219280|gb|AEM99910.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=1407
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/131 (54%), Positives = 82/131 (63%), Gaps = 22/131 (16%)
Query 1 MSYVIATPEMMATAAFDLARIGSQV---------SAASAVAAMPTTEVVAAGADEVSAGI 51
MS VI PE +A AA D+ARIGS + S TT V+AAGADEVSA I
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGS---------TTSVLAAGADEVSAAI 51
Query 52 AALFSAHAQEYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNA 107
A LF +HA+EYQA+S Q AAFHD+F TL+AA Y + E NAA + VL A+NA
Sbjct 52 ATLFGSHAREYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNA 111
Query 108 PTQTLLGRPLI 118
PTQ LLGRPLI
Sbjct 112 PTQALLGRPLI 122
>gi|15840909|ref|NP_335946.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13881112|gb|AAK45760.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=1408
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/131 (54%), Positives = 82/131 (63%), Gaps = 22/131 (16%)
Query 1 MSYVIATPEMMATAAFDLARIGSQV---------SAASAVAAMPTTEVVAAGADEVSAGI 51
MS VI PE +A AA D+ARIGS + S TT V+AAGADEVSA I
Sbjct 2 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGS---------TTSVLAAGADEVSAAI 52
Query 52 AALFSAHAQEYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNA 107
A LF +HA+EYQA+S Q AAFHD+F TL+AA Y + E NAA + VL A+NA
Sbjct 53 ATLFGSHAREYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNA 112
Query 108 PTQTLLGRPLI 118
PTQ LLGRPLI
Sbjct 113 PTQALLGRPLI 123
>gi|148661242|ref|YP_001282765.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|148505394|gb|ABQ73203.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=1398
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/131 (54%), Positives = 82/131 (63%), Gaps = 22/131 (16%)
Query 1 MSYVIATPEMMATAAFDLARIGSQV---------SAASAVAAMPTTEVVAAGADEVSAGI 51
MS VI PE +A AA D+ARIGS + S TT V+AAGADEVSA I
Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGS---------TTSVLAAGADEVSAAI 51
Query 52 AALFSAHAQEYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNA 107
A LF +HA+EYQA+S Q AAFHD+F TL+AA Y + E NAA + VL A+NA
Sbjct 52 ATLFGSHAREYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNA 111
Query 108 PTQTLLGRPLI 118
PTQ LLGRPLI
Sbjct 112 PTQALLGRPLI 122
>gi|183980964|ref|YP_001849255.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174290|gb|ACC39400.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1425
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/122 (55%), Positives = 83/122 (69%), Gaps = 2/122 (1%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
MS+ + P+M+ AA DLA+IG+ + S AA TT ++ A ADEVSA IA+LF HA
Sbjct 1 MSFTVVEPQMLTAAAADLAKIGAAIDTVSTAAAASTTNLLPAAADEVSAAIASLFGTHAL 60
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
YQA+ AQAA FHD FV L+ AA Y ATE+AN + +LG +NAPTQ L GRPLIG+
Sbjct 61 AYQAIGAQAATFHDGFVQALSRAASRYAATEVANVE--QNLLGLINAPTQALFGRPLIGN 118
Query 121 GA 122
GA
Sbjct 119 GA 120
>gi|183982664|ref|YP_001850955.1| PE-PGRS family protein, PE_PGRS50 [Mycobacterium marinum M]
gi|183175990|gb|ACC41100.1| PE-PGRS family protein, PE_PGRS50 [Mycobacterium marinum M]
Length=2118
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/132 (57%), Positives = 92/132 (70%), Gaps = 7/132 (5%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
MS V +PE++A AA DLARIGS + AA+A AA PTT V++A ADEVS IA LF HA
Sbjct 1 MSLVTVSPELVAGAASDLARIGSSLGAANAAAAGPTTTVLSAAADEVSVAIATLFGTHAA 60
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVV-------LGAVNAPTQTLL 113
EYQ+LSA+ AAFH+QFV TLT+ A Y +TE NA+ + + L A+NAPTQ+ L
Sbjct 61 EYQSLSARMAAFHEQFVQTLTSGAGIYVSTEATNASFISALQLAEQNALNAINAPTQSWL 120
Query 114 GRPLIGDGAHGT 125
GRPLIG+G T
Sbjct 121 GRPLIGNGVDAT 132
>gi|183981230|ref|YP_001849521.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174556|gb|ACC39666.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=963
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/125 (55%), Positives = 86/125 (69%), Gaps = 6/125 (4%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
M++V+ PEM+ AA DLA IGS ++ A+ A PT E++AAG DEVS IA+LFS HA
Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAAPTAELLAAGTDEVSEAIASLFSGHAL 60
Query 61 EYQALSAQAAAFHDQFVHTLTA---AARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPL 117
+YQ+L A+ AFHDQFV LTA Y++ E A A ++ +L VNAPTQ LLGRPL
Sbjct 61 DYQSLGARMTAFHDQFVAALTAGGGL---YSSAEAAAATPLQDLLNVVNAPTQALLGRPL 117
Query 118 IGDGA 122
IGDGA
Sbjct 118 IGDGA 122
>gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183175442|gb|ACC40552.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1386
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/127 (56%), Positives = 86/127 (68%), Gaps = 14/127 (11%)
Query 1 MSYV-IATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHA 59
MS+V +A PEM+A AA DL R+GS +SAA+ AA TT ++AAGADEVSA IAALF HA
Sbjct 1 MSFVGVA-PEMVAVAASDLERLGSTISAANVAAAGSTTTILAAGADEVSAVIAALFGTHA 59
Query 60 QEYQALSAQAAAFHDQFVHTLT----AAARWYTATEIANAAAMRVV----LGAVNAPTQT 111
EYQA+S Q + FH+QFV TLT A Y+A E+ N ++ V L VNAPTQ
Sbjct 60 LEYQAISTQLSVFHEQFVQTLTNGVGA----YSAAELVNVLPLQNVEQDLLNLVNAPTQA 115
Query 112 LLGRPLI 118
L GRPLI
Sbjct 116 LFGRPLI 122
>gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174786|gb|ACC39896.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1483
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/121 (61%), Positives = 89/121 (74%), Gaps = 2/121 (1%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
MS+V PEM+A A DLA IGS +SAA+A A TT+VV A ADEVSA IAALF +HA+
Sbjct 1 MSFVNVAPEMVAAAVEDLAGIGSSISAANAAAVALTTDVVPAAADEVSAAIAALFGSHAR 60
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
EYQA+SAQ+AAFH++ V TL + A Y TE+ANA + +L AVN PTQ LGRPLIG+
Sbjct 61 EYQAISAQSAAFHERLVQTLRSGASAYLGTELANAQ--QNLLNAVNGPTQAWLGRPLIGN 118
Query 121 G 121
G
Sbjct 119 G 119
>gi|183981229|ref|YP_001849520.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174555|gb|ACC39665.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=946
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/126 (57%), Positives = 89/126 (71%), Gaps = 8/126 (6%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAA-SAVAAMPTTEVVAAGADEVSAGIAALFSAHA 59
M++V+ PEM+ AA DLA IGS ++ A +AVAA PT E++AAG DEVS IA+LFS HA
Sbjct 1 MAFVLVAPEMVTAAASDLANIGSAINTANTAVAA-PTAELLAAGTDEVSEAIASLFSGHA 59
Query 60 QEYQALSAQAAAFHDQFVHTLTA---AARWYTATEIANAAAMRVVLGAVNAPTQTLLGRP 116
+YQ+L A+ AFHDQFV LTA Y++ E A A ++ +L VNAPTQ LLGRP
Sbjct 60 LDYQSLGARMTAFHDQFVAALTAGGGL---YSSAEAAAATPLQDLLNVVNAPTQALLGRP 116
Query 117 LIGDGA 122
LIGDGA
Sbjct 117 LIGDGA 122
>gi|183985012|ref|YP_001853303.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183178338|gb|ACC43448.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1451
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/137 (52%), Positives = 86/137 (63%), Gaps = 26/137 (18%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
MSY+IA PE+M +AA DLA I S +SAA+ AA+PTT+++AAGADEVSA IAALF AHAQ
Sbjct 1 MSYLIAAPELMQSAAADLAGIESALSAANVSAAVPTTQILAAGADEVSAAIAALFGAHAQ 60
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIAN-------------AAAMRVVLGAVNA 107
YQAL + AFH +FV L N A ++ + VNA
Sbjct 61 AYQALGSHVTAFHQEFVQAL-------------NSGAASYANAEAASIAPLQALYDLVNA 107
Query 108 PTQTLLGRPLIGDGAHG 124
PTQ LLGRPLIG+GA+G
Sbjct 108 PTQALLGRPLIGNGANG 124
>gi|183981609|ref|YP_001849900.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174935|gb|ACC40045.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=3634
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/130 (57%), Positives = 96/130 (74%), Gaps = 8/130 (6%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
MSY+ +PE++++AA +LA IGS VSAA+A AA+ TTE++AAG+DEVS IAALF A+
Sbjct 1 MSYMSISPEIVSSAAGELANIGSTVSAANAAAAVATTELLAAGSDEVSTRIAALFGANGV 60
Query 61 EYQALSAQAAAFHDQFVHTL---TAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPL 117
EYQA+SAQ A+FHD+FV L T++ W AT + + +L AVNAP QTLLGRPL
Sbjct 61 EYQAISAQIASFHDRFVAALNTGTSSYVWAEATNVE-----QNLLNAVNAPVQTLLGRPL 115
Query 118 IGDGAHGTAP 127
IG+GA+ T P
Sbjct 116 IGNGANATTP 125
>gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183175440|gb|ACC40550.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1397
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/122 (60%), Positives = 87/122 (72%), Gaps = 2/122 (1%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
MS+V TPEM+ AA DL+ I S ++ A++VAA TT V+ A ADEVSA IAALF HAQ
Sbjct 1 MSFVSVTPEMVVAAASDLSGINSAIAQANSVAAAATTTVLPAAADEVSAAIAALFGTHAQ 60
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
+YQA+SA+ AAFHD+FV +L A Y E ANA + +LG VNAPTQ L GRPLIGD
Sbjct 61 QYQAISAELAAFHDRFVQSLNTGAGSYLRAEAANAE--QGLLGLVNAPTQALFGRPLIGD 118
Query 121 GA 122
GA
Sbjct 119 GA 120
>gi|183985312|ref|YP_001853603.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183178638|gb|ACC43748.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=846
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/129 (54%), Positives = 92/129 (72%), Gaps = 5/129 (3%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAA-GADEVSAGIAALFSAHA 59
MSYV A+PE++ AA +++ IGS + A+A AA PTT +++A GADEVSA + A+F HA
Sbjct 1 MSYVFASPEVLNAAAAEVSTIGSSLQTANASAAAPTTALLSALGADEVSAAVTAMFGNHA 60
Query 60 QEYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGR 115
Q YQA+S QAA FHD+FV LTA A Y++ E + AA ++ +L VNAPTQ LLGR
Sbjct 61 QAYQAVSTQAAEFHDRFVAALTAGADAYSSAEASTAATLQSLPQDLLNVVNAPTQALLGR 120
Query 116 PLIGDGAHG 124
LIG+GA+G
Sbjct 121 ALIGNGANG 129
>gi|340627501|ref|YP_004745953.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340005691|emb|CCC44857.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=1302
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/126 (70%), Positives = 101/126 (81%), Gaps = 3/126 (2%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
+S VIATP+++A AA DLA IGSQ+SAA A AA+PTTEVVAA ADEVSA IA +F AHA+
Sbjct 9 VSLVIATPQLLAAAAVDLASIGSQLSAAHAAAALPTTEVVAAAADEVSAAIAGVFGAHAR 68
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120
EYQALS Q A FH++FV LTAAA WY TE AAA R +LGAVNAPT+ LLGRPLIG+
Sbjct 69 EYQALSGQVAVFHERFVQALTAAAGWYAGTE---AAAERSLLGAVNAPTEALLGRPLIGN 125
Query 121 GAHGTA 126
GA GTA
Sbjct 126 GADGTA 131
>gi|340626464|ref|YP_004744916.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340004654|emb|CCC43798.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=1408
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/122 (62%), Positives = 88/122 (73%), Gaps = 4/122 (3%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
MS VI TPE +A AA D+ARIGS AA+A AA TT V+AAGADEVSA IA LF ++A+
Sbjct 1 MSLVIVTPESVAAAASDVARIGSGFGAANAAAAGSTTSVLAAGADEVSAAIALLFGSYAR 60
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGRP 116
EYQA+S Q AAFHD+FV TL+AA Y + E NAA + VL A+NAPTQ LLGRP
Sbjct 61 EYQAISTQVAAFHDRFVQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120
Query 117 LI 118
LI
Sbjct 121 LI 122
>gi|183985330|ref|YP_001853621.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183178656|gb|ACC43766.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=2001
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/126 (55%), Positives = 86/126 (69%), Gaps = 4/126 (3%)
Query 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60
MSYVIATP+M+A AA DL IGS + AA++ A TT ++AA DEVS IA+LFSA AQ
Sbjct 1 MSYVIATPDMLAAAASDLTNIGSTLGAANSAALARTTGLLAAAEDEVSTAIASLFSASAQ 60
Query 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGRP 116
EYQ +S +AA H +FVH+LT A Y A E NA+ ++ VL A+NAP+Q L RP
Sbjct 61 EYQMVSTRAAHLHAEFVHSLTRAGAAYAAAEAVNASPLQTLEQNVLAAINAPSQALTARP 120
Query 117 LIGDGA 122
L GDGA
Sbjct 121 LFGDGA 126
>gi|339633355|ref|YP_004724997.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339332711|emb|CCC28429.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=1916
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/136 (57%), Positives = 90/136 (67%), Gaps = 21/136 (15%)
Query 1 MSYVIATPEMM-ATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHA 59
MS ++A PE++ A AA DL IG +SAA+A AA PTT+V+AA DEVSA IAALF HA
Sbjct 3 MSLMVA-PELVAAAAA-DLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
Query 60 QEYQALSAQAAAFHDQFVHTLTAA-----------ARWYTATEIANAAAMRVVLGAVNAP 108
QEYQALSA+ A FH+QFV +LTAA A A E + VLGA+NAP
Sbjct 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALE-------QQVLGAINAP 113
Query 109 TQTLLGRPLIGDGAHG 124
TQ LGRPLIGDG HG
Sbjct 114 TQLWLGRPLIGDGVHG 129
>gi|339299780|gb|AEJ51890.1| hypothetical protein CCDC5180_3053 [Mycobacterium tuberculosis
CCDC5180]
Length=1562
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/136 (57%), Positives = 90/136 (67%), Gaps = 21/136 (15%)
Query 1 MSYVIATPEMM-ATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHA 59
MS ++A PE++ A AA DL IG +SAA+A AA PTT+V+AA DEVSA IAALF HA
Sbjct 1 MSLMVA-PELVAAAAA-DLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 58
Query 60 QEYQALSAQAAAFHDQFVHTLTAA-----------ARWYTATEIANAAAMRVVLGAVNAP 108
QEYQALSA+ A FH+QFV +LTAA A A E + VLGA+NAP
Sbjct 59 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALE-------QQVLGAINAP 111
Query 109 TQTLLGRPLIGDGAHG 124
TQ LGRPLIGDG HG
Sbjct 112 TQLWLGRPLIGDGVHG 127
>gi|340628328|ref|YP_004746780.1| pe_pgrs50 protein [Mycobacterium canettii CIPT 140010059]
gi|340006518|emb|CCC45702.1| pe_pgrs50 protein [Mycobacterium canettii CIPT 140010059]
Length=2008
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/136 (57%), Positives = 90/136 (67%), Gaps = 21/136 (15%)
Query 1 MSYVIATPEMM-ATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHA 59
MS ++A PE++ A AA DL IG +SAA+A AA PTT+V+AA DEVSA IAALF HA
Sbjct 3 MSLMVA-PELVAAAAA-DLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
Query 60 QEYQALSAQAAAFHDQFVHTLTAA-----------ARWYTATEIANAAAMRVVLGAVNAP 108
QEYQALSA+ A FH+QFV +LTAA A A E + VLGA+NAP
Sbjct 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALE-------QQVLGAINAP 113
Query 109 TQTLLGRPLIGDGAHG 124
TQ LGRPLIGDG HG
Sbjct 114 TQLWLGRPLIGDGVHG 129
>gi|121639272|ref|YP_979496.1| hypothetical protein BCG_3414c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224991769|ref|YP_002646458.1| hypothetical protein JTY_3414 [Mycobacterium bovis BCG str. Tokyo
172]
gi|121494920|emb|CAL73403.1| PE_PGRS50 [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224774884|dbj|BAH27690.1| hypothetical protein JTY_3414 [Mycobacterium bovis BCG str. Tokyo
172]
Length=1876
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/136 (57%), Positives = 90/136 (67%), Gaps = 21/136 (15%)
Query 1 MSYVIATPEMM-ATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHA 59
MS ++A PE++ A AA DL IG +SAA+A AA PTT+V+AA DEVSA IAALF HA
Sbjct 3 MSLMVA-PELVAAAAA-DLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
Query 60 QEYQALSAQAAAFHDQFVHTLTAA-----------ARWYTATEIANAAAMRVVLGAVNAP 108
QEYQALSA+ A FH+QFV +LTAA A A E + VLGA+NAP
Sbjct 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALE-------QQVLGAINAP 113
Query 109 TQTLLGRPLIGDGAHG 124
TQ LGRPLIGDG HG
Sbjct 114 TQLWLGRPLIGDGVHG 129
>gi|148824551|ref|YP_001289305.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|148723078|gb|ABR07703.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
Length=1570
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/136 (57%), Positives = 90/136 (67%), Gaps = 21/136 (15%)
Query 1 MSYVIATPEMM-ATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHA 59
MS ++A PE++ A AA DL IG +SAA+A AA PTT+V+AA DEVSA IAALF HA
Sbjct 3 MSLMVA-PELVAAAAA-DLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
Query 60 QEYQALSAQAAAFHDQFVHTLTAA-----------ARWYTATEIANAAAMRVVLGAVNAP 108
QEYQALSA+ A FH+QFV +LTAA A A E + VLGA+NAP
Sbjct 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALE-------QQVLGAINAP 113
Query 109 TQTLLGRPLIGDGAHG 124
TQ LGRPLIGDG HG
Sbjct 114 TQLWLGRPLIGDGVHG 129
>gi|341603297|emb|CCC65975.1| PE_PGRS50 [Mycobacterium bovis BCG str. Moreau RDJ]
Length=1876
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/136 (57%), Positives = 90/136 (67%), Gaps = 21/136 (15%)
Query 1 MSYVIATPEMM-ATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHA 59
MS ++A PE++ A AA DL IG +SAA+A AA PTT+V+AA DEVSA IAALF HA
Sbjct 3 MSLMVA-PELVAAAAA-DLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHA 60
Query 60 QEYQALSAQAAAFHDQFVHTLTAA-----------ARWYTATEIANAAAMRVVLGAVNAP 108
QEYQALSA+ A FH+QFV +LTAA A A E + VLGA+NAP
Sbjct 61 QEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALE-------QQVLGAINAP 113
Query 109 TQTLLGRPLIGDGAHG 124
TQ LGRPLIGDG HG
Sbjct 114 TQLWLGRPLIGDGVHG 129
Lambda K H
0.306 0.143 0.446
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 4329018710496
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40