BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2494

Length=141
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15609631|ref|NP_217010.1|  hypothetical protein Rv2494 [Mycoba...   277    4e-73
gi|289758626|ref|ZP_06518004.1|  conserved hypothetical protein [...   276    9e-73
gi|15842022|ref|NP_337059.1|  hypothetical protein MT2569 [Mycoba...   274    3e-72
gi|254232624|ref|ZP_04925951.1|  conserved hypothetical protein [...   251    3e-65
gi|225874392|ref|YP_002755851.1|  Mycobacterium tuberculosis PIN ...   111    3e-23
gi|15609667|ref|NP_217046.1|  hypothetical protein Rv2530c [Mycob...   110    8e-23
gi|121595342|ref|YP_987238.1|  PilT domain-containing protein [Ac...   106    1e-21
gi|262201135|ref|YP_003272343.1|  PIN domain-containing protein f...   105    2e-21
gi|206601848|gb|EDZ38331.1|  Hypothetical protein CGL2_11278040 [...  99.8    1e-19
gi|333815879|gb|AEG08546.1|  PIN domain protein family protein [S...  98.2    3e-19
gi|87123102|ref|ZP_01078953.1|  hypothetical protein RS9917_04565...  96.7    1e-18
gi|334319720|ref|YP_004556349.1|  PIN domain-containing protein f...  95.9    2e-18
gi|241518561|ref|YP_002979189.1|  PIN domain protein family prote...  95.1    3e-18
gi|330818818|ref|YP_004351035.1|  PilT domain-containing protein ...  94.0    6e-18
gi|294339103|emb|CAZ87457.1|  conserved hypothetical protein; put...  93.2    1e-17
gi|134291479|ref|YP_001115248.1|  PilT domain-containing protein ...  92.0    2e-17
gi|320109069|ref|YP_004184659.1|  PIN domain-containing protein f...  91.7    3e-17
gi|336115788|ref|YP_004570554.1|  hypothetical protein MLP_01370 ...  90.5    7e-17
gi|114331350|ref|YP_747572.1|  PilT domain-containing protein [Ni...  90.1    9e-17
gi|336120816|ref|YP_004575602.1|  hypothetical protein MLP_51850 ...  90.1    9e-17
gi|24214369|ref|NP_711850.1|  hypothetical protein LA_1669 [Lepto...  86.7    1e-15
gi|45657964|ref|YP_002050.1|  hypothetical protein LIC12116 [Lept...  86.3    2e-15
gi|344199817|ref|YP_004784143.1|  PIN domain-containing protein f...  86.3    2e-15
gi|289747139|ref|ZP_06506517.1|  conserved hypothetical protein [...  84.7    5e-15
gi|15610456|ref|NP_217837.1|  hypothetical protein Rv3320c [Mycob...  84.3    6e-15
gi|254420497|ref|ZP_05034221.1|  Mycobacterium tuberculosis PIN d...  84.3    6e-15
gi|340628304|ref|YP_004746756.1|  hypothetical protein MCAN_33461...  84.0    6e-15
gi|116624591|ref|YP_826747.1|  PilT domain-containing protein [Ca...  84.0    7e-15
gi|340358885|ref|ZP_08681388.1|  PIN family toxin-antitoxin syste...  83.6    9e-15
gi|240169388|ref|ZP_04748047.1|  hypothetical protein MkanA1_0874...  83.2    1e-14
gi|326772971|ref|ZP_08232255.1|  toxin-antitoxin system, toxin co...  80.9    6e-14
gi|15607757|ref|NP_215131.1|  hypothetical protein Rv0617 [Mycoba...  80.5    7e-14
gi|113953974|ref|YP_729372.1|  hypothetical protein sync_0135 [Sy...  80.1    1e-13
gi|269954934|ref|YP_003324723.1|  PIN domain-containing protein f...  79.0    2e-13
gi|256826277|ref|YP_003150237.1|  nucleic acid-binding protein [K...  74.3    5e-12
gi|304413692|ref|ZP_07395136.1|  PIN domain-containing addiction ...  73.2    1e-11
gi|87123276|ref|ZP_01079127.1|  hypothetical protein RS9917_05435...  70.5    7e-11
gi|336179654|ref|YP_004585029.1|  PIN domain-containing protein f...  67.8    5e-10
gi|317967919|ref|ZP_07969309.1|  hypothetical protein SCB02_00127...  67.4    6e-10
gi|124515583|gb|EAY57093.1|  conserved hypothetical protein [Lept...  62.0    3e-08
gi|227876599|ref|ZP_03994709.1|  conserved hypothetical protein [...  59.3    2e-07
gi|16264146|ref|NP_436938.1|  hypothetical protein SM_b20412 [Sin...  57.4    7e-07
gi|324997204|ref|ZP_08118316.1|  toxin [Pseudonocardia sp. P1]        55.8    2e-06
gi|225156269|ref|ZP_03724747.1|  conserved hypothetical protein [...  50.4    8e-05
gi|289749117|ref|ZP_06508495.1|  conserved hypothetical protein [...  50.4    9e-05
gi|160898241|ref|YP_001563823.1|  PilT domain-containing protein ...  48.9    2e-04
gi|16264145|ref|NP_436937.1|  hypothetical protein SM_b20411 [Sin...  47.0    8e-04
gi|218459869|ref|ZP_03499960.1|  hypothetical protein RetlK5_1036...  47.0    8e-04
gi|190895067|ref|YP_001985360.1|  hypothetical protein RHECIAT_PC...  46.2    0.001
gi|225155788|ref|ZP_03724275.1|  hypothetical protein ObacDRAFT_8...  45.1    0.004


>gi|15609631|ref|NP_217010.1| hypothetical protein Rv2494 [Mycobacterium tuberculosis H37Rv]
 gi|31793674|ref|NP_856167.1| hypothetical protein Mb2522 [Mycobacterium bovis AF2122/97]
 gi|121638376|ref|YP_978600.1| hypothetical protein BCG_2514 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 68 more sequence titles
 Length=141

 Score =  277 bits (709),  Expect = 4e-73, Method: Compositional matrix adjust.
 Identities = 140/141 (99%), Positives = 141/141 (100%), Gaps = 0/141 (0%)

Query  1    VALLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIG  60
            +ALLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIG
Sbjct  1    MALLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIG  60

Query  61   IADARRVLVALRAVGGHRFLADDVSLVDDDVPLIVGYRQVTDAHLLTLARRRGVRLVTFD  120
            IADARRVLVALRAVGGHRFLADDVSLVDDDVPLIVGYRQVTDAHLLTLARRRGVRLVTFD
Sbjct  61   IADARRVLVALRAVGGHRFLADDVSLVDDDVPLIVGYRQVTDAHLLTLARRRGVRLVTFD  120

Query  121  AGVFTLAQQRPKTPVELLTIL  141
            AGVFTLAQQRPKTPVELLTIL
Sbjct  121  AGVFTLAQQRPKTPVELLTIL  141


>gi|289758626|ref|ZP_06518004.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|294994398|ref|ZP_06800089.1| toxin [Mycobacterium tuberculosis 210]
 gi|289714190|gb|EFD78202.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|326904108|gb|EGE51041.1| toxin [Mycobacterium tuberculosis W-148]
 gi|339295377|gb|AEJ47488.1| hypothetical protein CCDC5079_2298 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339298997|gb|AEJ51107.1| hypothetical protein CCDC5180_2270 [Mycobacterium tuberculosis 
CCDC5180]
Length=141

 Score =  276 bits (705),  Expect = 9e-73, Method: Compositional matrix adjust.
 Identities = 139/141 (99%), Positives = 140/141 (99%), Gaps = 0/141 (0%)

Query  1    VALLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIG  60
            +ALLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVR STNPKVLPSAIG
Sbjct  1    MALLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRASTNPKVLPSAIG  60

Query  61   IADARRVLVALRAVGGHRFLADDVSLVDDDVPLIVGYRQVTDAHLLTLARRRGVRLVTFD  120
            IADARRVLVALRAVGGHRFLADDVSLVDDDVPLIVGYRQVTDAHLLTLARRRGVRLVTFD
Sbjct  61   IADARRVLVALRAVGGHRFLADDVSLVDDDVPLIVGYRQVTDAHLLTLARRRGVRLVTFD  120

Query  121  AGVFTLAQQRPKTPVELLTIL  141
            AGVFTLAQQRPKTPVELLTIL
Sbjct  121  AGVFTLAQQRPKTPVELLTIL  141


>gi|15842022|ref|NP_337059.1| hypothetical protein MT2569 [Mycobacterium tuberculosis CDC1551]
 gi|254366798|ref|ZP_04982840.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|13882299|gb|AAK46873.1| hypothetical protein MT2569 [Mycobacterium tuberculosis CDC1551]
 gi|134152308|gb|EBA44353.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|323718902|gb|EGB28056.1| toxin protein [Mycobacterium tuberculosis CDC1551A]
Length=141

 Score =  274 bits (700),  Expect = 3e-72, Method: Compositional matrix adjust.
 Identities = 139/141 (99%), Positives = 140/141 (99%), Gaps = 0/141 (0%)

Query  1    VALLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIG  60
            +ALLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIG
Sbjct  1    MALLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIG  60

Query  61   IADARRVLVALRAVGGHRFLADDVSLVDDDVPLIVGYRQVTDAHLLTLARRRGVRLVTFD  120
            IADAR VLVALRAVGGHRFLADDVSLVDDDVPLIVGYRQVTDAHLLTLARRRGVRLVTFD
Sbjct  61   IADARPVLVALRAVGGHRFLADDVSLVDDDVPLIVGYRQVTDAHLLTLARRRGVRLVTFD  120

Query  121  AGVFTLAQQRPKTPVELLTIL  141
            AGVFTLAQQRPKTPVELLTIL
Sbjct  121  AGVFTLAQQRPKTPVELLTIL  141


>gi|254232624|ref|ZP_04925951.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|124601683|gb|EAY60693.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
Length=141

 Score =  251 bits (640),  Expect = 3e-65, Method: Compositional matrix adjust.
 Identities = 138/141 (98%), Positives = 140/141 (99%), Gaps = 0/141 (0%)

Query  1    VALLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIG  60
            +AL+DVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIG
Sbjct  1    MALIDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIG  60

Query  61   IADARRVLVALRAVGGHRFLADDVSLVDDDVPLIVGYRQVTDAHLLTLARRRGVRLVTFD  120
            IADAR VLVALRAVGGHRFLADDVSLVDDDVPLIVGYRQVTDAHLLTLARRRGVRLVTFD
Sbjct  61   IADARPVLVALRAVGGHRFLADDVSLVDDDVPLIVGYRQVTDAHLLTLARRRGVRLVTFD  120

Query  121  AGVFTLAQQRPKTPVELLTIL  141
            AGVFTLAQQRPKTPVELLTIL
Sbjct  121  AGVFTLAQQRPKTPVELLTIL  141


>gi|225874392|ref|YP_002755851.1| Mycobacterium tuberculosis PIN domain protein [Acidobacterium 
capsulatum ATCC 51196]
 gi|225792658|gb|ACO32748.1| Mycobacterium tuberculosis PIN domain protein [Acidobacterium 
capsulatum ATCC 51196]
Length=146

 Score =  111 bits (278),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 59/130 (46%), Positives = 81/130 (63%), Gaps = 5/130 (3%)

Query  1    VALLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIG  60
            V LLDVN LVA+ W SH+HH R ++WF+ ++  GWATCPLT+ GFVR+ +NP    SA+ 
Sbjct  3    VTLLDVNVLVAMFWPSHVHHVRAQQWFSEHSRHGWATCPLTQTGFVRIVSNPAFSKSAVT  62

Query  61   IADARRVLVALRAVGGHRFLADDVSLVDDDVPL----IVGYRQVTDAHLLTLARRRGVRL  116
              DA  VL        H F AD V  V++        ++G++QVTDA+L+ LA     RL
Sbjct  63   ARDAIHVLQENLKHRSHVFWADSVG-VNEAASFTHDRLIGHKQVTDAYLIGLAHHHQGRL  121

Query  117  VTFDAGVFTL  126
            +TFD G+ +L
Sbjct  122  LTFDRGLGSL  131


>gi|15609667|ref|NP_217046.1| hypothetical protein Rv2530c [Mycobacterium tuberculosis H37Rv]
 gi|15842064|ref|NP_337101.1| hypothetical protein MT2605 [Mycobacterium tuberculosis CDC1551]
 gi|31793711|ref|NP_856204.1| hypothetical protein Mb2559c [Mycobacterium bovis AF2122/97]
 81 more sequence titles
 Length=139

 Score =  110 bits (274),  Expect = 8e-23, Method: Compositional matrix adjust.
 Identities = 58/121 (48%), Positives = 78/121 (65%), Gaps = 3/121 (2%)

Query  2    ALLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGI  61
            ALLDVN L+AL W +H+HHA  + WFT  ++ GWAT P+TEAG+VR+S+N  V+  +   
Sbjct  3    ALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVSTTP  62

Query  62   ADARRVLVALRAVGGHRFLADDVSLV---DDDVPLIVGYRQVTDAHLLTLARRRGVRLVT  118
            A A   L A+ ++ GH F  DDV L+     D   +  +R+VTD HL+ LA R G RLVT
Sbjct  63   AIAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRLVT  122

Query  119  F  119
            F
Sbjct  123  F  123


>gi|121595342|ref|YP_987238.1| PilT domain-containing protein [Acidovorax sp. JS42]
 gi|120607422|gb|ABM43162.1| PIN domain family protein [Acidovorax sp. JS42]
Length=142

 Score =  106 bits (265),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 59/125 (48%), Positives = 77/125 (62%), Gaps = 4/125 (3%)

Query  2    ALLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGI  61
            ALLDVN L+AL   +HIHH R  +W   +   GWA+CPLT+ G +R+   P   P A+ +
Sbjct  3    ALLDVNVLIALLDAAHIHHQRASQWLEQSLHHGWASCPLTQNGCLRIMAQPAY-PQALPL  61

Query  62   ADARRVLVALRAVGGHRFLADDVSLVDDDV---PLIVGYRQVTDAHLLTLARRRGVRLVT  118
            A   + L    A   H F+ADD SL+D D    P ++G+RQVTDA+LL LA R G R V+
Sbjct  62   AAVAQRLGQAAATPAHLFIADDYSLLDADSLHWPQLLGHRQVTDAYLLGLAVRHGCRFVS  121

Query  119  FDAGV  123
            FDA V
Sbjct  122  FDARV  126


>gi|262201135|ref|YP_003272343.1| PIN domain-containing protein family protein [Gordonia bronchialis 
DSM 43247]
 gi|262084482|gb|ACY20450.1| PIN domain protein family protein [Gordonia bronchialis DSM 43247]
Length=144

 Score =  105 bits (262),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 60/123 (49%), Positives = 75/123 (61%), Gaps = 4/123 (3%)

Query  3    LLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGIA  62
            LLD+N LVAL+WD H+HH    E F       W+TCP+TEAG VRV      +   +  A
Sbjct  7    LLDINVLVALSWDQHVHHGVAHERFAQLTE--WSTCPVTEAGLVRVLMTESAVGRVVTGA  64

Query  63   DARRVLVALRAVGGHRFLADDVSLVDD--DVPLIVGYRQVTDAHLLTLARRRGVRLVTFD  120
            +A   L ALR V G  FL DD SL D   D+ +++G RQVTD HL+ LA R G +L TFD
Sbjct  65   EALGQLAALRTVTGWGFLHDDASLADSVIDLRVLMGRRQVTDLHLVNLAARNGRKLATFD  124

Query  121  AGV  123
            AG+
Sbjct  125  AGL  127


>gi|206601848|gb|EDZ38331.1| Hypothetical protein CGL2_11278040 [Leptospirillum sp. Group 
II '5-way CG']
Length=142

 Score = 99.8 bits (247),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 56/131 (43%), Positives = 76/131 (59%), Gaps = 4/131 (3%)

Query  2    ALLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGI  61
            +LLD+N L+AL    H+ H   REWF+ +AT GWA+CPLT+ G +R+ ++P   P+ I I
Sbjct  3    SLLDINVLIALLDSDHVSHHTAREWFSLHATDGWASCPLTQNGCMRIMSHPN-YPNPISI  61

Query  62   ADARRVLVALRAVGGHRFLADDVSLVD---DDVPLIVGYRQVTDAHLLTLARRRGVRLVT  118
            +  R  L    +   H+F  DDVS +D    D   I G  Q+TD +LL LA R   R VT
Sbjct  62   SRIRERLSEAASSSLHQFWPDDVSFLDAGVADTARIHGPHQITDLYLLALAIRHKGRFVT  121

Query  119  FDAGVFTLAQQ  129
            FD  + T A Q
Sbjct  122  FDGSIVTSAVQ  132


>gi|333815879|gb|AEG08546.1| PIN domain protein family protein [Sinorhizobium meliloti BL225C]
Length=147

 Score = 98.2 bits (243),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 56/121 (47%), Positives = 71/121 (59%), Gaps = 3/121 (2%)

Query  3    LLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGIA  62
            LLDVN L+AL   SHI H    EWF +     WATCP+TE G +R+  NP+   S     
Sbjct  4    LLDVNVLIALIDPSHIGHDDAHEWFASIGQTAWATCPITENGVIRIVGNPEYPNSPGSPL  63

Query  63   DARRVLVALRAVGGHRFLADDVSLV--DDDVP-LIVGYRQVTDAHLLTLARRRGVRLVTF  119
             A  ++  LR++ GH F  DDVSLV   D +P  I+   QVTD +LL LA+ RG +L TF
Sbjct  64   PAMEIVAKLRSLPGHVFWPDDVSLVGSSDIIPSKILTSGQVTDTYLLALAKARGGKLATF  123

Query  120  D  120
            D
Sbjct  124  D  124


>gi|87123102|ref|ZP_01078953.1| hypothetical protein RS9917_04565 [Synechococcus sp. RS9917]
 gi|86168822|gb|EAQ70078.1| hypothetical protein RS9917_04565 [Synechococcus sp. RS9917]
Length=149

 Score = 96.7 bits (239),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 53/130 (41%), Positives = 75/130 (58%), Gaps = 3/130 (2%)

Query  1    VALLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIG  60
            +ALLDVN L+AL    H+HH     WF ANA+ GWATCPLT+   +R+ +NP+   S  G
Sbjct  5    IALLDVNVLIALLDPQHVHHEPAHRWFQANASYGWATCPLTQNALLRILSNPRYPNSPGG  64

Query  61   IADARRVLVALRAVGGHRFLADDVSLVDD---DVPLIVGYRQVTDAHLLTLARRRGVRLV  117
             A    +L  + +  GH F  D +S   D      L++ + Q+TD +LL LA  +G  L+
Sbjct  65   PASVMPLLQGMLSHPGHLFWPDLLSWSTDGELQAELLLHHGQITDTYLLALAVHQGGCLM  124

Query  118  TFDAGVFTLA  127
            +FDA + T A
Sbjct  125  SFDARLSTCA  134


>gi|334319720|ref|YP_004556349.1| PIN domain-containing protein family protein [Sinorhizobium meliloti 
AK83]
 gi|334097459|gb|AEG55469.1| PIN domain protein family protein [Sinorhizobium meliloti AK83]
Length=147

 Score = 95.9 bits (237),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 55/121 (46%), Positives = 70/121 (58%), Gaps = 3/121 (2%)

Query  3    LLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGIA  62
            LLDVN L+AL   SHI H    EWF +     WATCP+TE G +R+  NP+   S     
Sbjct  4    LLDVNVLIALIDPSHIGHDDAHEWFASIGQTTWATCPITENGVIRIVGNPEYPNSPGSPL  63

Query  63   DARRVLVALRAVGGHRFLADDVSLV--DDDVP-LIVGYRQVTDAHLLTLARRRGVRLVTF  119
                ++  LR++ GH F  DDVSLV   D +P  I+   QVTD +LL LA+ RG +L TF
Sbjct  64   PVMEIVAKLRSLPGHVFWPDDVSLVGSSDIIPSKILTSGQVTDTYLLALAKARGGKLATF  123

Query  120  D  120
            D
Sbjct  124  D  124


>gi|241518561|ref|YP_002979189.1| PIN domain protein family protein [Rhizobium leguminosarum bv. 
trifolii WSM1325]
 gi|240862974|gb|ACS60638.1| PIN domain protein family protein [Rhizobium leguminosarum bv. 
trifolii WSM1325]
Length=147

 Score = 95.1 bits (235),  Expect = 3e-18, Method: Compositional matrix adjust.
 Identities = 58/140 (42%), Positives = 77/140 (55%), Gaps = 3/140 (2%)

Query  3    LLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGIA  62
            LLDVN L+AL    H+ H    EWF A     WATCP+TE G +R+  NP+   S    +
Sbjct  4    LLDVNVLIALIDPGHVAHDDAHEWFAAIGQSAWATCPITENGVIRIVGNPQYPNSPGSPS  63

Query  63   DARRVLVALRAVGGHRFLADDVSLV--DDDVPL-IVGYRQVTDAHLLTLARRRGVRLVTF  119
                ++  LR++ GH F  DDVSLV   D  P  I+   QVTD +LL LA+ RG +L TF
Sbjct  64   LVMEIVRKLRSLPGHSFWPDDVSLVGSGDIAPAKILTSGQVTDTYLLALAKARGGQLATF  123

Query  120  DAGVFTLAQQRPKTPVELLT  139
            D  +   A  R  + + L+T
Sbjct  124  DRKLSAAAVTRGNSALHLIT  143


>gi|330818818|ref|YP_004351035.1| PilT domain-containing protein [Burkholderia gladioli BSR3]
 gi|327374360|gb|AEA65712.1| PilT domain-containing protein [Burkholderia gladioli BSR3]
Length=151

 Score = 94.0 bits (232),  Expect = 6e-18, Method: Compositional matrix adjust.
 Identities = 58/122 (48%), Positives = 72/122 (60%), Gaps = 5/122 (4%)

Query  3    LLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGIA  62
            LLDVN L+AL    H+ H    EWF + A   WATCPLTE G +R+  NP+  P+ +G  
Sbjct  12   LLDVNVLIALLDAGHVQHEAAHEWFGSAAHAAWATCPLTENGVLRIIGNPR-YPNTLGTP  70

Query  63   DARRVLVA-LRAVGGHRFLADDVSLVDD---DVPLIVGYRQVTDAHLLTLARRRGVRLVT  118
             A   LV  LRA  GH F  DD+SL++    DV  I+   QVTD +LL LAR  G +L T
Sbjct  71   AAVAPLVTQLRAHPGHTFWWDDLSLLNPEQVDVSRILATDQVTDTYLLALARVHGGKLAT  130

Query  119  FD  120
            FD
Sbjct  131  FD  132


>gi|294339103|emb|CAZ87457.1| conserved hypothetical protein; putative PIN domain [Thiomonas 
sp. 3As]
Length=143

 Score = 93.2 bits (230),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 49/121 (41%), Positives = 72/121 (60%), Gaps = 3/121 (2%)

Query  3    LLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGIA  62
            LLDVN L+AL   +H+ H     WF    +  WATCPLTE G +R+  +P+   +    A
Sbjct  5    LLDVNVLIALIDPAHVQHDAAHHWFAETGSASWATCPLTENGLLRIVGHPRYPNTPGTPA  64

Query  63   DARRVLVALRAVGGHRFLADDVSLVDDDVPL---IVGYRQVTDAHLLTLARRRGVRLVTF  119
                VL ALRA+ GH F  DD+SL++ ++ L   ++ + Q+TD++LL LAR    +L +F
Sbjct  65   TVAVVLQALRALPGHHFWPDDISLLNPELILTDRLLSHTQITDSYLLALARHHSGKLASF  124

Query  120  D  120
            D
Sbjct  125  D  125


>gi|134291479|ref|YP_001115248.1| PilT domain-containing protein [Burkholderia vietnamiensis G4]
 gi|134134668|gb|ABO58993.1| PIN domain family protein [Burkholderia vietnamiensis G4]
Length=144

 Score = 92.0 bits (227),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 51/121 (43%), Positives = 69/121 (58%), Gaps = 3/121 (2%)

Query  3    LLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGIA  62
            LLDVN L+AL   +H+ H     WF       WATCPLTE G +R+  NPK   + +  A
Sbjct  5    LLDVNVLIALLDPAHVQHEPAHAWFGRVGHSAWATCPLTENGVLRIIGNPKYPNTMVSPA  64

Query  63   DARRVLVALRAVGGHRFLADDVSLVDD---DVPLIVGYRQVTDAHLLTLARRRGVRLVTF  119
                ++V LR+  GH F +DDVSL+D+   D   ++   Q+TD +LL LAR    +L TF
Sbjct  65   SVAPLVVQLRSHAGHTFWSDDVSLLDEKHVDATRLLSSAQLTDTYLLALARAHKGKLATF  124

Query  120  D  120
            D
Sbjct  125  D  125


>gi|320109069|ref|YP_004184659.1| PIN domain-containing protein family protein [Terriglobus saanensis 
SP1PR4]
 gi|319927590|gb|ADV84665.1| PIN domain protein family protein [Terriglobus saanensis SP1PR4]
Length=147

 Score = 91.7 bits (226),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 59/139 (43%), Positives = 75/139 (54%), Gaps = 6/139 (4%)

Query  3    LLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGIA  62
            LLDVN  VAL  + H HH  +  WF   + L WA CP TEAGF+R +T P+  P  I + 
Sbjct  9    LLDVNVFVALLSEDHTHHQLVTAWFNTPSLL-WAICPFTEAGFLRNATAPR--PGQITMT  65

Query  63   DARRVLVALRAVGGHRFL---ADDVSLVDDDVPLIVGYRQVTDAHLLTLARRRGVRLVTF  119
            +A  VL  +  V G+ +L   AD  SL       + G +QVTDA+LL LA R  + LVT 
Sbjct  66   EATAVLARMAQVPGYHYLPITADWRSLCSPFSTRLYGTKQVTDAYLLGLAVREDLVLVTM  125

Query  120  DAGVFTLAQQRPKTPVELL  138
            D G+  LA       V LL
Sbjct  126  DKGILHLAGNEYSAHVLLL  144


>gi|336115788|ref|YP_004570554.1| hypothetical protein MLP_01370 [Microlunatus phosphovorus NM-1]
 gi|334683566|dbj|BAK33151.1| hypothetical protein MLP_01370 [Microlunatus phosphovorus NM-1]
Length=139

 Score = 90.5 bits (223),  Expect = 7e-17, Method: Compositional matrix adjust.
 Identities = 53/123 (44%), Positives = 71/123 (58%), Gaps = 4/123 (3%)

Query  3    LLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGIA  62
            LLDVN L+AL+WD H+HH    + F    T  W TCP TEAG VR+    +V+   +  +
Sbjct  2    LLDVNVLLALSWDQHVHHEIAHQRFAELDT--WNTCPTTEAGLVRLLLTEQVVGRKVIGS  59

Query  63   DARRVLVALRAVGGHRFLADDVSLVDD--DVPLIVGYRQVTDAHLLTLARRRGVRLVTFD  120
            +A   L A+R V G  FL D  SL +   D  +++G RQVTD  L+ LA     +L TFD
Sbjct  60   EALGQLAAMRGVSGWGFLPDSGSLAEPVIDTRVLMGRRQVTDLQLVNLAASNNTKLATFD  119

Query  121  AGV  123
            AG+
Sbjct  120  AGL  122


>gi|114331350|ref|YP_747572.1| PilT domain-containing protein [Nitrosomonas eutropha C91]
 gi|114308364|gb|ABI59607.1| PIN domain family protein [Nitrosomonas eutropha C91]
Length=142

 Score = 90.1 bits (222),  Expect = 9e-17, Method: Compositional matrix adjust.
 Identities = 50/123 (41%), Positives = 70/123 (57%), Gaps = 4/123 (3%)

Query  2    ALLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGI  61
            ALLDVN L+AL    H+HH R  +W       GWA+CPLT+ G +R+ T P   P A+ +
Sbjct  3    ALLDVNVLIALLDAGHVHHVRASQWLEQEIIHGWASCPLTQNGCLRIMTQP-AYPEALSL  61

Query  62   ADARRVLVALRAVGGHRFLADDVSLVDDDV---PLIVGYRQVTDAHLLTLARRRGVRLVT  118
            A     L    A   H F+ADD SL+D +      ++G+ Q+ D++LL LA R   R V+
Sbjct  62   AAVASRLAQAIAHPTHAFVADDYSLLDAEQVNWQQMLGHWQIIDSYLLGLAVRHHCRFVS  121

Query  119  FDA  121
            FD+
Sbjct  122  FDS  124


>gi|336120816|ref|YP_004575602.1| hypothetical protein MLP_51850 [Microlunatus phosphovorus NM-1]
 gi|334688614|dbj|BAK38199.1| hypothetical protein MLP_51850 [Microlunatus phosphovorus NM-1]
Length=148

 Score = 90.1 bits (222),  Expect = 9e-17, Method: Compositional matrix adjust.
 Identities = 53/120 (45%), Positives = 73/120 (61%), Gaps = 4/120 (3%)

Query  3    LLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGIA  62
            L DVN LVAL   +H+HH + + WFT+     +AT P+TE+GF+R++ NP V      + 
Sbjct  13   LPDVNLLVALLHPAHVHHLQAQAWFTS--VERFATTPITESGFIRMALNPAVAGQVTSLD  70

Query  63   DARRVLVALRAVGGHRFLADDVSLVDDDVPLI--VGYRQVTDAHLLTLARRRGVRLVTFD  120
            DA   L ++RA     ++ADD SL    + L+  VG+RQVTD HL+ LA     RLVTFD
Sbjct  71   DAMSSLNSVRADKRVEYVADDTSLALPTIDLVGLVGFRQVTDFHLVNLAACHSARLVTFD  130


>gi|24214369|ref|NP_711850.1| hypothetical protein LA_1669 [Leptospira interrogans serovar 
Lai str. 56601]
 gi|24195304|gb|AAN48868.1| hypothetical protein LA_1669 [Leptospira interrogans serovar 
Lai str. 56601]
Length=144

 Score = 86.7 bits (213),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 46/139 (34%), Positives = 76/139 (55%), Gaps = 3/139 (2%)

Query  3    LLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGIA  62
            LLDVN L++L   +H+ H +  +WF   A  GWATCP+T+   VR+ ++     +  G+ 
Sbjct  4    LLDVNVLISLCDSNHVFHEKAWKWFDRKAKNGWATCPITQNALVRIMSHSSYPGNPGGVE  63

Query  63   DARRVLVALRAVGGHRFLADDVSLVDDDVPL---IVGYRQVTDAHLLTLARRRGVRLVTF  119
                +L +L  V GH+F+ D++S+      L    V  +Q+TD +LL L+    V+  TF
Sbjct  64   VVSAILHSLLKVKGHQFIPDNISINSSLFYLNIVSVSSKQITDVYLLALSVHHKVKFATF  123

Query  120  DAGVFTLAQQRPKTPVELL  138
            D+ +   +  R K  +EL+
Sbjct  124  DSKIPYDSVDRGKEHLELI  142


>gi|45657964|ref|YP_002050.1| hypothetical protein LIC12116 [Leptospira interrogans serovar 
Copenhageni str. Fiocruz L1-130]
 gi|45601205|gb|AAS70687.1| conserved hypothetical protein [Leptospira interrogans serovar 
Copenhageni str. Fiocruz L1-130]
Length=144

 Score = 86.3 bits (212),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 46/139 (34%), Positives = 76/139 (55%), Gaps = 3/139 (2%)

Query  3    LLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGIA  62
            LLDVN L++L   +H+ H +  +WF   A  GWATCP+T+   VR+ ++     +  G+ 
Sbjct  4    LLDVNVLISLCDSNHVFHEKAWKWFDRKARNGWATCPITQNALVRIMSHSSYPGNPGGVE  63

Query  63   DARRVLVALRAVGGHRFLADDVSLVDDDVPL---IVGYRQVTDAHLLTLARRRGVRLVTF  119
                +L +L  V GH+F+ D++S+      L    V  +Q+TD +LL L+    V+  TF
Sbjct  64   VVSAILHSLLKVKGHQFIPDNISINSSLFYLNIVSVSSKQITDVYLLALSVHHKVKFATF  123

Query  120  DAGVFTLAQQRPKTPVELL  138
            D+ +   +  R K  +EL+
Sbjct  124  DSKIPYDSVDRGKEHLELI  142


>gi|344199817|ref|YP_004784143.1| PIN domain-containing protein family protein [Acidithiobacillus 
ferrivorans SS3]
 gi|343775261|gb|AEM47817.1| PIN domain protein family protein [Acidithiobacillus ferrivorans 
SS3]
Length=142

 Score = 86.3 bits (212),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 54/129 (42%), Positives = 73/129 (57%), Gaps = 5/129 (3%)

Query  3    LLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGIA  62
            LLDVN L+AL    H+ H    EWF A+    WATCPLTE G +R+  +P+  P++ G  
Sbjct  4    LLDVNVLIALIDPMHVQHDMAHEWFAAHGQPAWATCPLTENGVLRIVGHPR-YPNSPGTP  62

Query  63   DARRVLV-ALRAVGGHRFLADDVSLVD---DDVPLIVGYRQVTDAHLLTLARRRGVRLVT  118
             A   L+  LRA  GH F  DD+SL+D    D   ++   Q+TD++LL LA     +L T
Sbjct  63   AAVAPLIQGLRASPGHVFWPDDISLLDVDHIDASRLLTSGQITDSYLLALACAHEGQLAT  122

Query  119  FDAGVFTLA  127
            FD  + T A
Sbjct  123  FDHRLVTNA  131


>gi|289747139|ref|ZP_06506517.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289687667|gb|EFD55155.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
Length=202

 Score = 84.7 bits (208),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 52/125 (42%), Positives = 68/125 (55%), Gaps = 4/125 (3%)

Query  2    ALLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGI  61
            ALLDVN L+AL    H+ H R R W T     GWA+C +T+ GFVRV + P+  PS I +
Sbjct  3    ALLDVNVLLALLDRDHVDHERARAWITGQIERGWASCAITQNGFVRVISQPR-YPSPISV  61

Query  62   ADARRVLVALRAVGGHRFLADDVSLVDD---DVPLIVGYRQVTDAHLLTLARRRGVRLVT  118
            A A  +L        H F +  VS++D    D   +   +QVTDA+LL LA     R VT
Sbjct  62   AHAIDLLARATHTRYHEFWSCTVSILDSKVIDRSRLHSPKQVTDAYLLALAVAHDGRFVT  121

Query  119  FDAGV  123
            FD  +
Sbjct  122  FDQSI  126


>gi|15610456|ref|NP_217837.1| hypothetical protein Rv3320c [Mycobacterium tuberculosis H37Rv]
 gi|15842912|ref|NP_337949.1| hypothetical protein MT3421 [Mycobacterium tuberculosis CDC1551]
 gi|31794501|ref|NP_856994.1| hypothetical protein Mb3349c [Mycobacterium bovis AF2122/97]
 77 more sequence titles
 Length=142

 Score = 84.3 bits (207),  Expect = 6e-15, Method: Compositional matrix adjust.
 Identities = 52/125 (42%), Positives = 68/125 (55%), Gaps = 4/125 (3%)

Query  2    ALLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGI  61
            ALLDVN L+AL    H+ H R R W T     GWA+C +T+ GFVRV + P+  PS I +
Sbjct  3    ALLDVNVLLALLDRDHVDHERARAWITGQIERGWASCAITQNGFVRVISQPR-YPSPISV  61

Query  62   ADARRVLVALRAVGGHRFLADDVSLVDD---DVPLIVGYRQVTDAHLLTLARRRGVRLVT  118
            A A  +L        H F +  VS++D    D   +   +QVTDA+LL LA     R VT
Sbjct  62   AHAIDLLARATHTRYHEFWSCTVSILDSKVIDRSRLHSPKQVTDAYLLALAVAHDGRFVT  121

Query  119  FDAGV  123
            FD  +
Sbjct  122  FDQSI  126


>gi|254420497|ref|ZP_05034221.1| Mycobacterium tuberculosis PIN domain family [Brevundimonas sp. 
BAL3]
 gi|196186674|gb|EDX81650.1| Mycobacterium tuberculosis PIN domain family [Brevundimonas sp. 
BAL3]
Length=145

 Score = 84.3 bits (207),  Expect = 6e-15, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 63/121 (53%), Gaps = 3/121 (2%)

Query  3    LLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGIA  62
            LLDVN L+AL    H+ H     WF   A   WATCP+TE G VR+  N +        +
Sbjct  4    LLDVNVLIALVDPRHVFHDTANGWFQREAAGSWATCPITENGLVRIVGNSRYRNPVGPPS  63

Query  63   DARRVLVALRAVGGHRFLADDVSLVDD---DVPLIVGYRQVTDAHLLTLARRRGVRLVTF  119
            +  R+L  LR + GH F  D +SL DD   D   +    Q+TDA+LL LA   G RL T 
Sbjct  64   EIVRILELLRDMAGHVFWPDAISLADDRLFDPSALTTPEQITDAYLLALAVSNGGRLATL  123

Query  120  D  120
            D
Sbjct  124  D  124


>gi|340628304|ref|YP_004746756.1| hypothetical protein MCAN_33461 [Mycobacterium canettii CIPT 
140010059]
 gi|340006494|emb|CCC45677.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=142

 Score = 84.0 bits (206),  Expect = 6e-15, Method: Compositional matrix adjust.
 Identities = 52/125 (42%), Positives = 68/125 (55%), Gaps = 4/125 (3%)

Query  2    ALLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGI  61
            ALLDVN L+AL    H+ H R R W T     GWA+C +T+ GFVRV + P+  PS I +
Sbjct  3    ALLDVNVLLALLDRDHVDHERARAWITGQIERGWASCAITQNGFVRVISQPR-YPSPISV  61

Query  62   ADARRVLVALRAVGGHRFLADDVSLVDDDV---PLIVGYRQVTDAHLLTLARRRGVRLVT  118
            A A  +L        H F +  VS++D  V     +   +QVTDA+LL LA     R VT
Sbjct  62   AHAIDLLARATHTRYHEFWSCTVSILDSKVIDRSRLHSPKQVTDAYLLALAVAHDGRFVT  121

Query  119  FDAGV  123
            FD  +
Sbjct  122  FDQAI  126


>gi|116624591|ref|YP_826747.1| PilT domain-containing protein [Candidatus Solibacter usitatus 
Ellin6076]
 gi|116227753|gb|ABJ86462.1| PIN domain family protein [Candidatus Solibacter usitatus Ellin6076]
Length=147

 Score = 84.0 bits (206),  Expect = 7e-15, Method: Compositional matrix adjust.
 Identities = 50/126 (40%), Positives = 68/126 (54%), Gaps = 3/126 (2%)

Query  1    VALLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIG  60
            +ALLDVN L+AL   +HI H     WF  N   GWATCP+T  G VR+ ++P        
Sbjct  3    IALLDVNVLIALFDPAHIDHVEAHRWFGLNRKRGWATCPITINGCVRILSSPGYPGINAS  62

Query  61   IADARRVLVALRAVGGHRFLADDVSLVDDDV---PLIVGYRQVTDAHLLTLARRRGVRLV  117
             A+    + A  A   H F  D VSL+D+ +    +I G++ +TD +LL LA R   RL 
Sbjct  63   PAEITARMQASFANVDHHFWPDSVSLLDEALFRPSMITGHKNITDVYLLGLAVRNHGRLA  122

Query  118  TFDAGV  123
            TFD  +
Sbjct  123  TFDQSI  128


>gi|340358885|ref|ZP_08681388.1| PIN family toxin-antitoxin system [Actinomyces sp. oral taxon 
448 str. F0400]
 gi|339885631|gb|EGQ75340.1| PIN family toxin-antitoxin system [Actinomyces sp. oral taxon 
448 str. F0400]
Length=148

 Score = 83.6 bits (205),  Expect = 9e-15, Method: Compositional matrix adjust.
 Identities = 48/123 (40%), Positives = 66/123 (54%), Gaps = 4/123 (3%)

Query  3    LLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGIA  62
            LLDVN ++AL+  +H HH     WF       WATCP+TE+ + R+  N  V    +G++
Sbjct  10   LLDVNVMLALSLANHAHHRVATSWFEDVG--AWATCPITESAYCRLLLNSHVTGFELGVS  67

Query  63   DARRVLVALRAVGGHRFLADDVSLVDD--DVPLIVGYRQVTDAHLLTLARRRGVRLVTFD  120
            +    L    +V GH  + D  SL     DV  +VG RQ+TD HL+ LA R G  L T D
Sbjct  68   EVFDALRTFCSVSGHELIEDSASLTAPAIDVSGLVGRRQITDFHLVDLAARSGALLATLD  127

Query  121  AGV  123
            A +
Sbjct  128  ARI  130


>gi|240169388|ref|ZP_04748047.1| hypothetical protein MkanA1_08748 [Mycobacterium kansasii ATCC 
12478]
Length=133

 Score = 83.2 bits (204),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 51/126 (41%), Positives = 70/126 (56%), Gaps = 6/126 (4%)

Query  1    VALLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIG  60
            +ALLD N L+AL    H+HH     W +A    G+ATCP+T+   VR        P+A+ 
Sbjct  2    IALLDSNVLIALVVAEHVHHDVAAAWLSARDN-GFATCPITQGSLVRFLMRTG-QPAAV-  58

Query  61   IADARRVLVALRAVGGHRFLADDVSLVDDDVPLIVGYRQVTDAHLLTLARRRGVRLVTFD  120
               AR V+ A+     H F  D VS  D ++  +VG+RQVTDA+L  LAR R  +L T D
Sbjct  59   ---AREVVGAVETAKRHEFWPDSVSFADVEIGGVVGHRQVTDAYLAQLARSRNGQLATLD  115

Query  121  AGVFTL  126
            +G+  L
Sbjct  116  SGLAHL  121


>gi|326772971|ref|ZP_08232255.1| toxin-antitoxin system, toxin component, PIN family [Actinomyces 
viscosus C505]
 gi|326637603|gb|EGE38505.1| toxin-antitoxin system, toxin component, PIN family [Actinomyces 
viscosus C505]
Length=146

 Score = 80.9 bits (198),  Expect = 6e-14, Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 72/140 (52%), Gaps = 4/140 (2%)

Query  3    LLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGIA  62
            LLDVN LVAL+  +H HH  +  WF  +    WATC +T+A ++R+  NP+V    I  A
Sbjct  9    LLDVNVLVALSLPNHAHHEVVSAWF--DGVDQWATCSITQAAYLRLLMNPRVTGFEIAAA  66

Query  63   DARRVLVALRAVGGHRFLADDVSLVDDDVPL--IVGYRQVTDAHLLTLARRRGVRLVTFD  120
            D    L  L ++  H FL DD    +  +    + G +QVTD HL+ LA R    L T D
Sbjct  67   DVLSGLGGLTSLDDHVFLVDDAPPAEPSISFSRLKGPKQVTDLHLVDLAARHNAVLATMD  126

Query  121  AGVFTLAQQRPKTPVELLTI  140
              +      + +  +EL+ +
Sbjct  127  GRMAQALMSQDRRHIELIPL  146


>gi|15607757|ref|NP_215131.1| hypothetical protein Rv0617 [Mycobacterium tuberculosis H37Rv]
 gi|15840020|ref|NP_335057.1| hypothetical protein MT0646 [Mycobacterium tuberculosis CDC1551]
 gi|31791800|ref|NP_854293.1| hypothetical protein Mb0634 [Mycobacterium bovis AF2122/97]
 79 more sequence titles
 Length=133

 Score = 80.5 bits (197),  Expect = 7e-14, Method: Compositional matrix adjust.
 Identities = 49/124 (40%), Positives = 69/124 (56%), Gaps = 6/124 (4%)

Query  3    LLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGIA  62
            LLD N L+AL    H+HH    +W  A+ T G+ATCP+T+   VR      ++ S    A
Sbjct  4    LLDANVLIALVVAEHVHHDAAADWLMASDT-GFATCPMTQGSLVRF-----LVRSGQSAA  57

Query  63   DARRVLVALRAVGGHRFLADDVSLVDDDVPLIVGYRQVTDAHLLTLARRRGVRLVTFDAG  122
             AR V+ A++    H F  D +S    +V  +VG+RQVTDA+L  LAR    +L T D+G
Sbjct  58   AARDVVSAVQCTSRHEFWPDALSFAGVEVAGVVGHRQVTDAYLAQLARSHDGQLATLDSG  117

Query  123  VFTL  126
            +  L
Sbjct  118  LAHL  121


>gi|113953974|ref|YP_729372.1| hypothetical protein sync_0135 [Synechococcus sp. CC9311]
 gi|113881325|gb|ABI46283.1| Mycobacterium tuberculosis PIN domain family subfamily [Synechococcus 
sp. CC9311]
Length=148

 Score = 80.1 bits (196),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 49/123 (40%), Positives = 64/123 (53%), Gaps = 3/123 (2%)

Query  1    VALLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIG  60
            +ALLDVN L+AL    H+HH     WF A+   GWATCPLT+   +R+  NP+   S  G
Sbjct  5    IALLDVNVLIALIDPQHVHHEPSHRWFQAHGGDGWATCPLTQNALLRILGNPRYPNSPGG  64

Query  61   IADARRVLVALRAVGGHRFLADDVSLVDDDV---PLIVGYRQVTDAHLLTLARRRGVRLV  117
             A     L  L A   H F  D +S     V     ++ + Q+TD +LL LA     RLV
Sbjct  65   PAVVMSFLQELLAHPAHVFWPDALSWQATGVFEAEALLHHGQITDTYLLGLAVHHQGRLV  124

Query  118  TFD  120
            +FD
Sbjct  125  SFD  127


>gi|269954934|ref|YP_003324723.1| PIN domain-containing protein family protein [Xylanimonas cellulosilytica 
DSM 15894]
 gi|269303615|gb|ACZ29165.1| PIN domain protein family protein [Xylanimonas cellulosilytica 
DSM 15894]
Length=141

 Score = 79.0 bits (193),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 55/141 (40%), Positives = 75/141 (54%), Gaps = 10/141 (7%)

Query  3    LLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGIA  62
            L DVN L+AL ++ H+HH     W        +AT  LTEAGFVRVS NP ++       
Sbjct  5    LPDVNVLIALHFEDHVHHVPAMSWLRKGGQ--FATTALTEAGFVRVSMNPAIVGEPFSGV  62

Query  63   DARRVLVALRAVGGH---RFLADDVSLVDDDVP--LIVGYRQVTDAHLLTLARRRGVRLV  117
            +A   L ALR + GH    F ADD SL        ++ G++Q TD HLL LA  R   LV
Sbjct  63   EA---LEALRRLRGHTRATFWADDTSLATSPFADRVLSGHKQTTDLHLLNLAASRDGVLV  119

Query  118  TFDAGVFTLAQQRPKTPVELL  138
            TFD+ +    +Q  +  +++L
Sbjct  120  TFDSKLGAPLRQAERRHLDVL  140


>gi|256826277|ref|YP_003150237.1| nucleic acid-binding protein [Kytococcus sedentarius DSM 20547]
 gi|256689670|gb|ACV07472.1| predicted nucleic acid-binding protein, contains PIN domain [Kytococcus 
sedentarius DSM 20547]
Length=147

 Score = 74.3 bits (181),  Expect = 5e-12, Method: Compositional matrix adjust.
 Identities = 49/126 (39%), Positives = 65/126 (52%), Gaps = 3/126 (2%)

Query  2    ALLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGI  61
            ALLDVN L+AL    H  H     W     + GWATC  T+ GF+RV + P   PS I +
Sbjct  9    ALLDVNTLIALLDIDHRDHEAAHRWAEERLSNGWATCATTQMGFLRVISQPG-YPSPITV  67

Query  62   ADARRVLVALRAVGGHRFLADDVSLVDDDVPL--IVGYRQVTDAHLLTLARRRGVRLVTF  119
             +A R+L        H + + +       V L  I G+RQ+TDA+LL LA  +   LVTF
Sbjct  68   DEAGRLLRRATDHPSHEYWSSEPQPCAGSVSLDVITGHRQITDAYLLALAVHQNGCLVTF  127

Query  120  DAGVFT  125
            D  + T
Sbjct  128  DRRITT  133


>gi|304413692|ref|ZP_07395136.1| PIN domain-containing addiction module [Candidatus Regiella insecticola 
LSR1]
 gi|304283783|gb|EFL92177.1| PIN domain-containing addiction module [Candidatus Regiella insecticola 
LSR1]
Length=147

 Score = 73.2 bits (178),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 45/123 (37%), Positives = 65/123 (53%), Gaps = 4/123 (3%)

Query  1    VALLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIG  60
            + LLDVN L+AL   +HI H     WF       WATCPLT+ G +R+  + +   S   
Sbjct  2    IFLLDVNVLIALVDPAHIQHDAAHTWFEKQGQ-DWATCPLTQNGVLRIVGHGRYPNSPGT  60

Query  61   IADARRVLVALRAVGGHRFLADDVSLVDD---DVPLIVGYRQVTDAHLLTLARRRGVRLV  117
             A    ++  L ++ GH F  DD+SL+D    D   ++   Q+TD++LL LA     +L 
Sbjct  61   PAAVAELMTTLCSLPGHCFWPDDISLLDTEKLDATRLLTSAQLTDSYLLALACAHNGQLA  120

Query  118  TFD  120
            TFD
Sbjct  121  TFD  123


>gi|87123276|ref|ZP_01079127.1| hypothetical protein RS9917_05435 [Synechococcus sp. RS9917]
 gi|86168996|gb|EAQ70252.1| hypothetical protein RS9917_05435 [Synechococcus sp. RS9917]
Length=143

 Score = 70.5 bits (171),  Expect = 7e-11, Method: Compositional matrix adjust.
 Identities = 42/122 (35%), Positives = 67/122 (55%), Gaps = 4/122 (3%)

Query  2    ALLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGI  61
            ALLD+N ++AL    H  H+   +W + +A  GWA+CP+++ G +R+ + P    +    
Sbjct  3    ALLDINVIIALLDGQHSLHSTASQWLSHHAAAGWASCPISQNGVIRIMSQPSYPNAQPPA  62

Query  62   ADARRVLVALRAVGGHRFLADDVSLVDD---DVPLIVGYRQVTDAHLLTLARRRGVRLVT  118
            A A R+  A R    H+F    +SL+D        ++G RQ+TDA+LL +A      LV+
Sbjct  63   AIASRLAEACRH-PSHQFWGGALSLLDPRHLKWHCLLGPRQITDAYLLAVAVANDGCLVS  121

Query  119  FD  120
            FD
Sbjct  122  FD  123


>gi|336179654|ref|YP_004585029.1| PIN domain-containing protein family protein [Frankia symbiont 
of Datisca glomerata]
 gi|334860634|gb|AEH11108.1| PIN domain protein family protein [Frankia symbiont of Datisca 
glomerata]
Length=131

 Score = 67.8 bits (164),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 43/124 (35%), Positives = 61/124 (50%), Gaps = 6/124 (4%)

Query  3    LLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGIA  62
            LLD N L+ L    H+HH     W    A   +ATCP+TE   VR+     ++       
Sbjct  4    LLDANVLITLIVTDHVHHDAAEAWLAGTAGR-FATCPITEGSLVRL-----LIREGQSAQ  57

Query  63   DARRVLVALRAVGGHRFLADDVSLVDDDVPLIVGYRQVTDAHLLTLARRRGVRLVTFDAG  122
             A  V+ A+     H F  D+VS     +  ++G+RQVTDA+L  LAR    RL +F+ G
Sbjct  58   TATAVVSAIAGDSRHEFWPDEVSYSAVSMTGVIGHRQVTDAYLAYLARTHNGRLASFNQG  117

Query  123  VFTL  126
            +  L
Sbjct  118  LAKL  121


>gi|317967919|ref|ZP_07969309.1| hypothetical protein SCB02_00127 [Synechococcus sp. CB0205]
Length=144

 Score = 67.4 bits (163),  Expect = 6e-10, Method: Compositional matrix adjust.
 Identities = 42/123 (35%), Positives = 57/123 (47%), Gaps = 3/123 (2%)

Query  1    VALLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIG  60
             ALLDVN L+AL    H+HH     WF       WA+C +T+   +R+  NP+   S   
Sbjct  5    TALLDVNVLIALLDPHHVHHELCHGWFADRGAAPWASCAMTQNAVLRILGNPRYPISPGP  64

Query  61   IADARRVLVALRAVGGHRFLADDVSLVDDDV---PLIVGYRQVTDAHLLTLARRRGVRLV  117
                   L +L    GH F   + SL+         ++ Y Q+TD +LL LAR  G  L 
Sbjct  65   PPTIAPHLDSLVEHPGHEFWDSNPSLLSQGFIARSALIDYAQITDLYLLALARHHGGTLA  124

Query  118  TFD  120
            T D
Sbjct  125  TLD  127


>gi|124515583|gb|EAY57093.1| conserved hypothetical protein [Leptospirillum rubarum]
Length=193

 Score = 62.0 bits (149),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 39/116 (34%), Positives = 62/116 (54%), Gaps = 4/116 (3%)

Query  2    ALLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGI  61
            +LLD+N L+ L    H+ H+  RE  + +AT GW++CPLT+ G + + + P   P  I +
Sbjct  71   SLLDINVLIVLLDSDHVFHSASREGLSLHATDGWSSCPLTDNGCMCIMSCPND-PDTIPV  129

Query  62   ADARRVLVALRAVGGHRFLADDVSLVDDDVPLIV---GYRQVTDAHLLTLARRRGV  114
            +  R  L    +   H+F  +DV  +D  V +     G RQ+TD   L+ + RR V
Sbjct  130  SRIRDRLSEAASGPPHQFWPEDVHFLDAGVAVASRTHGPRQITDLSWLSPSGRRDV  185


>gi|227876599|ref|ZP_03994709.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
 gi|227842800|gb|EEJ52999.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
Length=130

 Score = 59.3 bits (142),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 38/121 (32%), Positives = 59/121 (49%), Gaps = 7/121 (5%)

Query  3    LLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGIA  62
            L+D NAL+A    +H HH  +  WF    T+   TCP+TE    R      ++ +    +
Sbjct  5    LIDANALIAFNISTHQHHDVVLRWFAQADTV--LTCPITEGALFRF-----IIRNHFDFS  57

Query  63   DARRVLVALRAVGGHRFLADDVSLVDDDVPLIVGYRQVTDAHLLTLARRRGVRLVTFDAG  122
             A ++L    A+   + + DD+   D +   + G+RQVTD +L  LA      L TFD G
Sbjct  58   VACQLLTDFCAIPKVQRIPDDLHYDDANWTGVRGFRQVTDVYLAELALHHDALLATFDQG  117

Query  123  V  123
            +
Sbjct  118  I  118


>gi|16264146|ref|NP_436938.1| hypothetical protein SM_b20412 [Sinorhizobium meliloti 1021]
 gi|15140271|emb|CAC48798.1| CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti 1021]
Length=54

 Score = 57.4 bits (137),  Expect = 7e-07, Method: Compositional matrix adjust.
 Identities = 26/51 (51%), Positives = 32/51 (63%), Gaps = 0/51 (0%)

Query  3   LLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPK  53
           LLDVN L+AL   SHI H    EWF +     WATCP+TE G +R+  NP+
Sbjct  4   LLDVNVLIALIDPSHIGHDDAHEWFASIGQTAWATCPITENGVIRIVGNPE  54


>gi|324997204|ref|ZP_08118316.1| toxin [Pseudonocardia sp. P1]
Length=141

 Score = 55.8 bits (133),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 43/122 (36%), Positives = 56/122 (46%), Gaps = 8/122 (6%)

Query  3    LLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGIA  62
            LLD N L+AL    H HH R   W        +A CP+ E   VR        PS     
Sbjct  5    LLDANVLIALTVTEHEHHDRASAW--GARIERFALCPVVEGALVRFLVRAGETPST----  58

Query  63   DARRVLVALRAVGGHRFLADDVSLVDDDVPLIVGYRQVTDAHLLTL-ARRRGVRLVTFDA  121
             A  +L A+ A+ G  F  D +S  D  +  + G+RQVTDA+L +L A   G    T D 
Sbjct  59   -ATGLLRAVHALPGCEFWPDSLSFADARLGHVGGHRQVTDAYLTSLVAAVPGASPATLDE  117

Query  122  GV  123
            G+
Sbjct  118  GL  119


>gi|225156269|ref|ZP_03724747.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]
 gi|224803001|gb|EEG21246.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]
Length=131

 Score = 50.4 bits (119),  Expect = 8e-05, Method: Compositional matrix adjust.
 Identities = 42/122 (35%), Positives = 60/122 (50%), Gaps = 9/122 (7%)

Query  3    LLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGIA  62
            LLDVN L+A     H  H  +  W          TC + E GF+R+S +   L     +A
Sbjct  4    LLDVNGLIAWRHTQHPKHVSLHAWAVRTGFKHMGTCAIVELGFLRISMSHYQL----TLA  59

Query  63   DARRVLVALRAVGGHRFLADDVSLVDDDVPL-IVGYRQVTDAHLLTLARRRGVRLVTFDA  121
            DAR+ L  +R + G  ++AD  S     +PL      + TDA+L  LA   G++L TFD 
Sbjct  60   DARKALADIRKLTG-GYIADCPS---PALPLWATTAARTTDAYLCQLATAHGLQLATFDT  115

Query  122  GV  123
            G+
Sbjct  116  GI  117


>gi|289749117|ref|ZP_06508495.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289689704|gb|EFD57133.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=116

 Score = 50.4 bits (119),  Expect = 9e-05, Method: Compositional matrix adjust.
 Identities = 32/88 (37%), Positives = 47/88 (54%), Gaps = 5/88 (5%)

Query  39   PLTEAGFVRVSTNPKVLPSAIGIADARRVLVALRAVGGHRFLADDVSLVDDDVPLIVGYR  98
            P+T+   VR      ++ S    A AR V+ A++    H F  D +S    +V  +VG+R
Sbjct  22   PMTQGSLVRF-----LVRSGQSAAAARDVVSAVQCTSRHEFWPDALSFAGVEVAGVVGHR  76

Query  99   QVTDAHLLTLARRRGVRLVTFDAGVFTL  126
            QVTDA+L  LAR    +L T D+G+  L
Sbjct  77   QVTDAYLAQLARSHDGQLATLDSGLAHL  104


>gi|160898241|ref|YP_001563823.1| PilT domain-containing protein [Delftia acidovorans SPH-1]
 gi|160363825|gb|ABX35438.1| PIN domain protein family protein [Delftia acidovorans SPH-1]
Length=145

 Score = 48.9 bits (115),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 44/134 (33%), Positives = 63/134 (48%), Gaps = 26/134 (19%)

Query  5    DVNALVALAWDSHIHHARIREWFT---ANATLG--WATCPLTEAGFVRVSTNPKVLPSAI  59
            DVN LVA +   H HH+  R+W     A+A+ G      P+  A F+R+ T+PK+  +  
Sbjct  4    DVNLLVAASRSDHPHHSVARDWLEQAMADASQGVLLKLQPMVVASFLRLVTHPKIFVNPT  63

Query  60   GIADARRVLVALRAVGG------------HRFLADDVSLVDDDVPLIVGYRQVTDAHLLT  107
             +A+A R + AL A  G             R L  D +L  +DVP         DA L  
Sbjct  64   PMAEALRFIDALLASPGVEQAVLGAEWPALRQLCADKALAANDVP---------DAWLAA  114

Query  108  LARRRGVRLVTFDA  121
             A  +G  +V+FDA
Sbjct  115  AAIHQGEHVVSFDA  128


>gi|16264145|ref|NP_436937.1| hypothetical protein SM_b20411 [Sinorhizobium meliloti 1021]
 gi|15140270|emb|CAC48797.1| CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti 1021]
Length=82

 Score = 47.0 bits (110),  Expect = 8e-04, Method: Compositional matrix adjust.
 Identities = 30/76 (40%), Positives = 44/76 (58%), Gaps = 3/76 (3%)

Query  66   RVLVALRAVGGHRFLADDVSLV--DDDVP-LIVGYRQVTDAHLLTLARRRGVRLVTFDAG  122
             ++  LR++ GH F  DDVSLV   D +P  I+   QVTD +LL LA+ RG +L TFD  
Sbjct  2    EIVAKLRSLPGHVFWPDDVSLVGSSDIIPSKILTSGQVTDTYLLALAKARGGKLATFDRK  61

Query  123  VFTLAQQRPKTPVELL  138
            +   A  +  + + L+
Sbjct  62   LSAAAVTKGNSALHLI  77


>gi|218459869|ref|ZP_03499960.1| hypothetical protein RetlK5_10369 [Rhizobium etli Kim 5]
Length=100

 Score = 47.0 bits (110),  Expect = 8e-04, Method: Compositional matrix adjust.
 Identities = 33/77 (43%), Positives = 43/77 (56%), Gaps = 3/77 (3%)

Query  47   RVSTNPKVLPSAIGIADARRVLVALRAVGGHRFLADDVSLVD--DDVPL-IVGYRQVTDA  103
            R+  +PK   S    A    ++  LR++ GH F  DDVSLV   D  P  I+   QVTD 
Sbjct  1    RIVGHPKYPNSPGSPALVMEIVRKLRSLPGHSFWPDDVSLVGSGDIAPTKILTPGQVTDT  60

Query  104  HLLTLARRRGVRLVTFD  120
            +LL LA+ RG +L TFD
Sbjct  61   YLLALAKARGGQLATFD  77


>gi|190895067|ref|YP_001985360.1| hypothetical protein RHECIAT_PC0000733 [Rhizobium etli CIAT 652]
 gi|190700728|gb|ACE94810.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length=82

 Score = 46.2 bits (108),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 31/77 (41%), Positives = 44/77 (58%), Gaps = 3/77 (3%)

Query  66   RVLVALRAVGGHRFLADDVSLVD--DDVPL-IVGYRQVTDAHLLTLARRRGVRLVTFDAG  122
             ++  LR++ GH F  DDVSLV   D  P  I+   QVTD +LL LA+  G +L TFD  
Sbjct  2    EIVRKLRSLPGHSFWPDDVSLVGSGDIAPTKILTSGQVTDTYLLALAKAHGGQLATFDRK  61

Query  123  VFTLAQQRPKTPVELLT  139
            +   A  R  + ++L+T
Sbjct  62   LSAAAVTRGNSALQLIT  78


>gi|225155788|ref|ZP_03724275.1| hypothetical protein ObacDRAFT_8771 [Opitutaceae bacterium TAV2]
 gi|224803440|gb|EEG21676.1| hypothetical protein ObacDRAFT_8771 [Opitutaceae bacterium TAV2]
Length=139

 Score = 45.1 bits (105),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 38/129 (30%), Positives = 56/129 (44%), Gaps = 12/129 (9%)

Query  3    LLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGIA  62
            LLD +A +A     H ++  +R W       GW     T    VR+  NP V+   +   
Sbjct  4    LLDNDAFLAAICLGHPNNKTVRAWLDQAKPSGWGITAETYLAAVRLMMNPAVMQQHV---  60

Query  63   DARRVLVALRAV-----GGH--RFLADDVSLVDDDVPLIVGYRQVTDAHLLTLARRRGVR  115
              R+V  AL AV     G H  R +    +     +    G++QV D  L+ +AR+ G +
Sbjct  61   --RKVDQALDAVDAELSGKHPGRIVYASENPNRTMLAKAQGHKQVMDIWLVQIARQEGCK  118

Query  116  LVTFDAGVF  124
            L T DAG  
Sbjct  119  LATNDAGTL  127



Lambda     K      H
   0.326    0.139    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 130347035928


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40