BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2504c
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609641|ref|NP_217020.1| succinyl-CoA:3-ketoacid-coenzyme A ... 504 6e-141
gi|306780543|ref|ZP_07418880.1| succinyl-CoA:3-ketoacid-coenzyme... 503 1e-140
gi|289575209|ref|ZP_06455436.1| succinyl-CoA:3-ketoacid-coenzyme... 499 1e-139
gi|183983826|ref|YP_001852117.1| succinyl-CoA:3-ketoacid-coenzym... 451 4e-125
gi|240171586|ref|ZP_04750245.1| succinyl-CoA:3-ketoacid-coenzyme... 449 2e-124
gi|118619026|ref|YP_907358.1| succinyl-CoA:3-ketoacid-coenzyme a... 448 4e-124
gi|296170426|ref|ZP_06852014.1| succinyl-CoA:3-ketoacid-coenzyme... 433 1e-119
gi|333990041|ref|YP_004522655.1| succinyl-CoA:3-ketoacid-coenzym... 416 1e-114
gi|288918824|ref|ZP_06413169.1| 3-oxoacid CoA-transferase, A sub... 398 4e-109
gi|325675676|ref|ZP_08155360.1| succinyl-CoA:3-ketoacid-coenzyme... 388 5e-106
gi|312140694|ref|YP_004008030.1| 3-oxoadipate CoA-transferase sc... 387 6e-106
gi|158316067|ref|YP_001508575.1| 3-oxoacid CoA-transferase subun... 384 6e-105
gi|229488553|ref|ZP_04382419.1| succinyl-CoA:3-ketoacid-coenzyme... 380 7e-104
gi|111018344|ref|YP_701316.1| 3-oxoacid CoA-transferase alpha su... 380 1e-103
gi|226360464|ref|YP_002778242.1| 3-oxoadipate CoA-transferase al... 380 1e-103
gi|226308772|ref|YP_002768732.1| 3-oxoadipate CoA-transferase al... 379 2e-103
gi|312197454|ref|YP_004017515.1| 3-oxoacid CoA-transferase, A su... 365 3e-99
gi|111222565|ref|YP_713359.1| succinyl-CoA:3-ketoacid-coenzyme A... 365 3e-99
gi|331696556|ref|YP_004332795.1| 3-oxoacid CoA-transferase subun... 363 2e-98
gi|325962781|ref|YP_004240687.1| 3-oxoacid CoA-transferase, subu... 358 4e-97
gi|220912176|ref|YP_002487485.1| 3-oxoacid CoA-transferase subun... 357 7e-97
gi|312141729|ref|YP_004009065.1| 3-oxoacid CoA-transferase subun... 356 2e-96
gi|163839311|ref|YP_001623716.1| 3-ketoacid-CoA transferase, alp... 353 1e-95
gi|324998744|ref|ZP_08119856.1| 3-oxoadipate CoA-transferase sco... 353 1e-95
gi|119962865|ref|YP_947298.1| 3-oxoacid CoA-transferase, A subun... 347 9e-94
gi|290963332|ref|YP_003494514.1| 3-oxoacid CoA-transferase subun... 345 3e-93
gi|226305324|ref|YP_002765282.1| succinyl-CoA--3-ketoacid CoA-tr... 345 3e-93
gi|229490572|ref|ZP_04384410.1| acetate CoA-transferase subunit ... 344 6e-93
gi|5209337|gb|AAD40812.1|AF109386_1 succinyl CoA:3-oxoadipate Co... 343 2e-92
gi|302555472|ref|ZP_07307814.1| succinyl CoA:3-oxoadipate CoA tr... 342 2e-92
gi|291435863|ref|ZP_06575253.1| succinyl CoA:3-oxoadipate CoA tr... 342 3e-92
gi|29828242|ref|NP_822876.1| 3-oxoacid CoA-transferase subunit A... 340 9e-92
gi|116669949|ref|YP_830882.1| 3-oxoacid CoA-transferase subunit ... 340 2e-91
gi|111020767|ref|YP_703739.1| 3-oxoacid CoA-transferase alpha su... 339 2e-91
gi|345003702|ref|YP_004806556.1| 3-oxoacid CoA-transferase subun... 338 3e-91
gi|257054769|ref|YP_003132601.1| 3-oxoacid CoA-transferase, A su... 338 6e-91
gi|84498127|ref|ZP_00996924.1| putative 3-oxoadipate CoA-transfe... 337 7e-91
gi|297203774|ref|ZP_06921171.1| succinyl CoA:3-oxoadipate CoA tr... 337 7e-91
gi|317124407|ref|YP_004098519.1| 3-oxoacid CoA-transferase, subu... 337 8e-91
gi|291442080|ref|ZP_06581470.1| 3-oxoadipate CoA-transferase sub... 337 9e-91
gi|229490114|ref|ZP_04383962.1| acetate CoA-transferase subunit ... 337 1e-90
gi|226304698|ref|YP_002764656.1| succinyl-CoA--3-ketoacid CoA-tr... 337 1e-90
gi|329937066|ref|ZP_08286695.1| 3-oxoadipate CoA-transferase sub... 336 2e-90
gi|269126577|ref|YP_003299947.1| 3-oxoacid CoA-transferase subun... 335 3e-90
gi|111221929|ref|YP_712723.1| acetyl-CoA:acetoacetyl-CoA transfe... 335 4e-90
gi|120405843|ref|YP_955672.1| 3-oxoacid CoA-transferase subunit ... 334 5e-90
gi|126348273|emb|CAJ89994.1| putative 3-oxoacid CoA-transferase ... 334 6e-90
gi|294632355|ref|ZP_06710915.1| succinyl-CoA:3-ketoacid-coenzyme... 334 7e-90
gi|325673011|ref|ZP_08152705.1| succinyl-CoA:3-ketoacid-coenzyme... 332 2e-89
gi|226363174|ref|YP_002780956.1| succinyl-CoA--3-ketoacid CoA-tr... 330 9e-89
>gi|15609641|ref|NP_217020.1| succinyl-CoA:3-ketoacid-coenzyme A transferase subunit alpha
ScoA [Mycobacterium tuberculosis H37Rv]
gi|15842032|ref|NP_337069.1| succinyl-CoA:3-ketoacid-coenzyme A transferase, A subunit [Mycobacterium
tuberculosis CDC1551]
gi|31793684|ref|NP_856177.1| succinyl-CoA:3-ketoacid-coenzyme A transferase subunit alpha
ScoA [Mycobacterium bovis AF2122/97]
60 more sequence titles
Length=248
Score = 504 bits (1297), Expect = 6e-141, Method: Compositional matrix adjust.
Identities = 248/248 (100%), Positives = 248/248 (100%), Gaps = 0/248 (0%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG
Sbjct 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP
Sbjct 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH
Sbjct 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK 240
GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK
Sbjct 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK 240
Query 241 IERETVRQ 248
IERETVRQ
Sbjct 241 IERETVRQ 248
>gi|306780543|ref|ZP_07418880.1| succinyl-CoA:3-ketoacid-coenzyme A transferase alpha subunit
scoA [Mycobacterium tuberculosis SUMu002]
gi|306785304|ref|ZP_07423626.1| succinyl-CoA:3-ketoacid-coenzyme A transferase alpha subunit
scoA [Mycobacterium tuberculosis SUMu003]
gi|306789658|ref|ZP_07427980.1| succinyl-CoA:3-ketoacid-coenzyme A transferase alpha subunit
scoA [Mycobacterium tuberculosis SUMu004]
13 more sequence titles
Length=248
Score = 503 bits (1294), Expect = 1e-140, Method: Compositional matrix adjust.
Identities = 247/248 (99%), Positives = 248/248 (100%), Gaps = 0/248 (0%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG
Sbjct 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP
Sbjct 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH
Sbjct 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK 240
GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHR+VHVPNPAKK
Sbjct 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRMVHVPNPAKK 240
Query 241 IERETVRQ 248
IERETVRQ
Sbjct 241 IERETVRQ 248
>gi|289575209|ref|ZP_06455436.1| succinyl-CoA:3-ketoacid-coenzyme A transferase alpha subunit
scoA [Mycobacterium tuberculosis K85]
gi|339632530|ref|YP_004724172.1| succinyl-CoA:3-ketoacid-coenzyme A transferase subunit alpha
[Mycobacterium africanum GM041182]
gi|289539640|gb|EFD44218.1| succinyl-CoA:3-ketoacid-coenzyme A transferase alpha subunit
scoA [Mycobacterium tuberculosis K85]
gi|339331886|emb|CCC27589.1| putative succinyl-CoA:3-ketoacid-coenzyme A transferase (alpha
subunit) SCOA (3-oxo acid:CoA transferase) [Mycobacterium
africanum GM041182]
Length=248
Score = 499 bits (1286), Expect = 1e-139, Method: Compositional matrix adjust.
Identities = 247/248 (99%), Positives = 247/248 (99%), Gaps = 0/248 (0%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG
Sbjct 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP
Sbjct 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH
Sbjct 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK 240
GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVH VVHVPNPAKK
Sbjct 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHWVVHVPNPAKK 240
Query 241 IERETVRQ 248
IERETVRQ
Sbjct 241 IERETVRQ 248
>gi|183983826|ref|YP_001852117.1| succinyl-CoA:3-ketoacid-coenzyme A transferase (alpha subunit)
ScoA [Mycobacterium marinum M]
gi|183177152|gb|ACC42262.1| succinyl-CoA:3-ketoacid-coenzyme A transferase (alpha subunit)
ScoA [Mycobacterium marinum M]
Length=248
Score = 451 bits (1160), Expect = 4e-125, Method: Compositional matrix adjust.
Identities = 226/247 (92%), Positives = 238/247 (97%), Gaps = 0/247 (0%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
MDKVVAT AEAVADI +G+SLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCG+DGVG
Sbjct 1 MDKVVATVAEAVADITDGASLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGVDGVG 60
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LG+LLQHKRIRRTVSSYVGENKEFARQFL+GELEVELTPQGTLAERLRAGGMGIP FYTP
Sbjct 61 LGVLLQHKRIRRTVSSYVGENKEFARQFLSGELEVELTPQGTLAERLRAGGMGIPGFYTP 120
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGTQ+ADGGLPWRYDASG VAVVSP KETREFDG TYVLERGIRTDFALVHAW+GDRH
Sbjct 121 AGVGTQIADGGLPWRYDASGAVAVVSPPKETREFDGATYVLERGIRTDFALVHAWKGDRH 180
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK 240
GNL+YR++AANFNPECA AGRITIAEVEHLVEPGEIDPATVHTPGVFV RVVHVPNP K+
Sbjct 181 GNLLYRYSAANFNPECAPAGRITIAEVEHLVEPGEIDPATVHTPGVFVQRVVHVPNPIKR 240
Query 241 IERETVR 247
IE+ETVR
Sbjct 241 IEKETVR 247
>gi|240171586|ref|ZP_04750245.1| succinyl-CoA:3-ketoacid-coenzyme A transferase (alpha subunit)
ScoA [Mycobacterium kansasii ATCC 12478]
Length=247
Score = 449 bits (1155), Expect = 2e-124, Method: Compositional matrix adjust.
Identities = 226/247 (92%), Positives = 239/247 (97%), Gaps = 0/247 (0%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
MDKVVATAAEAVADI +GSSLAVGGFGLCGIP+ALI+ALVDSGVTDLETVSNNCGIDGVG
Sbjct 1 MDKVVATAAEAVADITDGSSLAVGGFGLCGIPDALISALVDSGVTDLETVSNNCGIDGVG 60
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LG+LL+HKRIRRT+SSYVGEN+EFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP
Sbjct 61 LGVLLEHKRIRRTISSYVGENREFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGTQ+ADGGLPWRYDAS VAVVSP KETREFDGVTYVLERGIRTDFALVHAW+GDRH
Sbjct 121 AGVGTQIADGGLPWRYDASAAVAVVSPPKETREFDGVTYVLERGIRTDFALVHAWKGDRH 180
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK 240
GNL+YR+AAANFNPECA AGRITIAEVEHLVEPGEIDPA VHTPGVFV RVVHVPNP K+
Sbjct 181 GNLVYRYAAANFNPECAPAGRITIAEVEHLVEPGEIDPAMVHTPGVFVQRVVHVPNPTKR 240
Query 241 IERETVR 247
IE+ETVR
Sbjct 241 IEKETVR 247
>gi|118619026|ref|YP_907358.1| succinyl-CoA:3-ketoacid-coenzyme a transferase (alpha subunit)
ScoA [Mycobacterium ulcerans Agy99]
gi|118571136|gb|ABL05887.1| succinyl-CoA:3-ketoacid-coenzyme a transferase (alpha subunit)
ScoA [Mycobacterium ulcerans Agy99]
Length=248
Score = 448 bits (1152), Expect = 4e-124, Method: Compositional matrix adjust.
Identities = 225/247 (92%), Positives = 237/247 (96%), Gaps = 0/247 (0%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
MDKVVAT AEAVADI +G+SLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCG+DGVG
Sbjct 1 MDKVVATVAEAVADITDGASLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGVDGVG 60
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LG+LLQHKRIRRTVSSYVGENKEFARQFL+GELEVELTPQGTLAERLRAGGMGIP FYTP
Sbjct 61 LGVLLQHKRIRRTVSSYVGENKEFARQFLSGELEVELTPQGTLAERLRAGGMGIPGFYTP 120
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGTQ+ADGGLPWRYDASG VAVVSP KETREFDG TYVLERGIRTDFALVHAW+GDRH
Sbjct 121 AGVGTQIADGGLPWRYDASGAVAVVSPPKETREFDGATYVLERGIRTDFALVHAWKGDRH 180
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK 240
GNL+YR++AANFNPECA AGRITIAEVEHLVEPGEI PATVHTPGVFV RVVHVPNP K+
Sbjct 181 GNLLYRYSAANFNPECAPAGRITIAEVEHLVEPGEIGPATVHTPGVFVQRVVHVPNPIKR 240
Query 241 IERETVR 247
IE+ETVR
Sbjct 241 IEKETVR 247
>gi|296170426|ref|ZP_06852014.1| succinyl-CoA:3-ketoacid-coenzyme A transferase [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295894897|gb|EFG74618.1| succinyl-CoA:3-ketoacid-coenzyme A transferase [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length=247
Score = 433 bits (1113), Expect = 1e-119, Method: Compositional matrix adjust.
Identities = 211/246 (86%), Positives = 227/246 (93%), Gaps = 0/246 (0%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
MDKVVATAAEA+ADI +GSSLAVGGFG CGIPEALIAALV++GV DLETVSNNCG +GVG
Sbjct 1 MDKVVATAAEAIADITDGSSLAVGGFGFCGIPEALIAALVNTGVRDLETVSNNCGGNGVG 60
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
L LL+HKRIRR V+SYVG+NKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP
Sbjct 61 LVHLLEHKRIRRAVASYVGDNKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGT VA+GGLPWRYDASG VAVVSP KETR+FDGVTYVLER IRTDFALVHAW+GDRH
Sbjct 121 AGVGTAVANGGLPWRYDASGAVAVVSPPKETRDFDGVTYVLERAIRTDFALVHAWKGDRH 180
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK 240
GNL+YR AAANFNP+CA AGR+TIAEVEHLVEPGEIDPA VHTPGVFV RVVH P+P K
Sbjct 181 GNLVYRRAAANFNPDCAQAGRVTIAEVEHLVEPGEIDPAAVHTPGVFVQRVVHAPDPVKP 240
Query 241 IERETV 246
IE+ TV
Sbjct 241 IEKVTV 246
>gi|333990041|ref|YP_004522655.1| succinyl-CoA:3-ketoacid-coenzyme A transferase (alpha subunit)
ScoA [Mycobacterium sp. JDM601]
gi|333486009|gb|AEF35401.1| succinyl-CoA:3-ketoacid-coenzyme A transferase (alpha subunit)
ScoA [Mycobacterium sp. JDM601]
Length=249
Score = 416 bits (1070), Expect = 1e-114, Method: Compositional matrix adjust.
Identities = 211/247 (86%), Positives = 230/247 (94%), Gaps = 0/247 (0%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
MDKVVATAA AVAD+ +G+SLAVGGFGLCGIPEALI A++ GVTDLETVSNNCG+DG+G
Sbjct 3 MDKVVATAAAAVADVTDGASLAVGGFGLCGIPEALINAVLQLGVTDLETVSNNCGVDGIG 62
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LG+LL+HKRIRRTVSSYVGENKEFARQFL+GELEVELTPQGTLAERLRAGG GIPAFYTP
Sbjct 63 LGVLLEHKRIRRTVSSYVGENKEFARQFLSGELEVELTPQGTLAERLRAGGAGIPAFYTP 122
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
GVGTQVADGGLPWRYD +GGVAV SP KETR+FDG TYVLER IRTDFALVHAW+GDRH
Sbjct 123 TGVGTQVADGGLPWRYDGAGGVAVASPRKETRDFDGRTYVLERAIRTDFALVHAWKGDRH 182
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK 240
GNL+YR AAANFNP+CA+AGRITIA+VEHLVEPGEI PA VHTPG+ VHRVVHVPNP K+
Sbjct 183 GNLVYREAAANFNPDCAAAGRITIAQVEHLVEPGEICPAEVHTPGIHVHRVVHVPNPEKR 242
Query 241 IERETVR 247
IERETVR
Sbjct 243 IERETVR 249
>gi|288918824|ref|ZP_06413169.1| 3-oxoacid CoA-transferase, A subunit [Frankia sp. EUN1f]
gi|288349786|gb|EFC84018.1| 3-oxoacid CoA-transferase, A subunit [Frankia sp. EUN1f]
Length=247
Score = 398 bits (1022), Expect = 4e-109, Method: Compositional matrix adjust.
Identities = 194/246 (79%), Positives = 213/246 (87%), Gaps = 0/246 (0%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
MDKVV +AA AVAD+ +G+SLAVGGFGLCGIP LI AL+D+G DLETVSNNCG+D G
Sbjct 1 MDKVVPSAALAVADVPDGASLAVGGFGLCGIPSGLIRALLDAGPKDLETVSNNCGVDDWG 60
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LGLLL+ RIRRT SYVGENKEF RQFLAGELEVEL PQGTLAERLRAGG GIPAFYTP
Sbjct 61 LGLLLRAGRIRRTTGSYVGENKEFERQFLAGELEVELVPQGTLAERLRAGGAGIPAFYTP 120
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGTQVADGGLPW YD SGGVAV SP KETREFDG +YVLERGI DFA VHAW+GDRH
Sbjct 121 AGVGTQVADGGLPWLYDGSGGVAVASPPKETREFDGRSYVLERGIVCDFAFVHAWKGDRH 180
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK 240
GNL+YR +AANFNP CA+AGR+TIAEVE LVEPGE+DPA VHTPG+FV RVVHVP+ K+
Sbjct 181 GNLVYRASAANFNPLCATAGRVTIAEVEELVEPGELDPAQVHTPGIFVQRVVHVPDTQKR 240
Query 241 IERETV 246
IE+ TV
Sbjct 241 IEKRTV 246
>gi|325675676|ref|ZP_08155360.1| succinyl-CoA:3-ketoacid-coenzyme A transferase [Rhodococcus equi
ATCC 33707]
gi|325553647|gb|EGD23325.1| succinyl-CoA:3-ketoacid-coenzyme A transferase [Rhodococcus equi
ATCC 33707]
Length=253
Score = 388 bits (996), Expect = 5e-106, Method: Compositional matrix adjust.
Identities = 185/247 (75%), Positives = 214/247 (87%), Gaps = 0/247 (0%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
MDKV+ATAAEAVAD+ +G+++AVGGFGL G+PE LI AL+D G TDLETVSNNCG DG G
Sbjct 6 MDKVIATAAEAVADVPDGATIAVGGFGLVGVPEILIGALLDQGATDLETVSNNCGTDGFG 65
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LG+LL+ RIRRT+SSYVG+NKEFARQ+L+GELEVELTPQGTLAERLRAGG GIPAF+TP
Sbjct 66 LGVLLEKGRIRRTISSYVGDNKEFARQYLSGELEVELTPQGTLAERLRAGGAGIPAFFTP 125
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGTQVA+GGLP RYD +GGVAV SP KETREFDG TYV+ERGI D+ALVHAW+GDRH
Sbjct 126 AGVGTQVAEGGLPRRYDGNGGVAVASPVKETREFDGTTYVMERGIAADYALVHAWKGDRH 185
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK 240
GNL+YR +A NFNP A++GRITIA+VEHLVEPGE+DP +HTPG+ V RVVHV
Sbjct 186 GNLVYRRSARNFNPPAAASGRITIAQVEHLVEPGELDPDQIHTPGIHVQRVVHVGKVNVG 245
Query 241 IERETVR 247
IE+ TVR
Sbjct 246 IEKRTVR 252
>gi|312140694|ref|YP_004008030.1| 3-oxoadipate CoA-transferase scoa [Rhodococcus equi 103S]
gi|311890033|emb|CBH49351.1| 3-oxoadipate CoA-transferase ScoA [Rhodococcus equi 103S]
Length=253
Score = 387 bits (995), Expect = 6e-106, Method: Compositional matrix adjust.
Identities = 185/247 (75%), Positives = 214/247 (87%), Gaps = 0/247 (0%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
MDKV+ATAAEAVAD+ +G+++AVGGFGL G+PE LI AL+D G TDLETVSNNCG DG G
Sbjct 6 MDKVIATAAEAVADVPDGATIAVGGFGLVGVPEILIGALLDQGATDLETVSNNCGTDGFG 65
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LG+LL+ RIRRT+SSYVG+NKEFARQ+L+GELEVELTPQGTLAERLRAGG GIPAF+TP
Sbjct 66 LGVLLEKGRIRRTISSYVGDNKEFARQYLSGELEVELTPQGTLAERLRAGGAGIPAFFTP 125
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGTQVA+GGLP RYD +GGVAV SP KETREFDG TYV+ERGI D+ALVHAW+GDRH
Sbjct 126 AGVGTQVAEGGLPRRYDGNGGVAVASPVKETREFDGTTYVMERGIAADYALVHAWKGDRH 185
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK 240
GNL+YR +A NFNP A++GRITIA+VEHLVEPGE+DP +HTPG+ V RVVHV
Sbjct 186 GNLVYRRSARNFNPPAAASGRITIAQVEHLVEPGELDPDQIHTPGIHVQRVVHVGKVDVG 245
Query 241 IERETVR 247
IE+ TVR
Sbjct 246 IEKRTVR 252
>gi|158316067|ref|YP_001508575.1| 3-oxoacid CoA-transferase subunit A [Frankia sp. EAN1pec]
gi|158111472|gb|ABW13669.1| 3-oxoacid CoA-transferase, A subunit [Frankia sp. EAN1pec]
Length=250
Score = 384 bits (986), Expect = 6e-105, Method: Compositional matrix adjust.
Identities = 188/246 (77%), Positives = 208/246 (85%), Gaps = 0/246 (0%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
+DKVV A AVADI +G+SLAVGGFGLCGIP LI AL+ +G DLETVSNNCG+D G
Sbjct 4 LDKVVPNAELAVADIPDGASLAVGGFGLCGIPSGLIRALLAAGPKDLETVSNNCGVDDWG 63
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LGLLL+ RIRRT SYVGENKEF RQFL+GELEVEL PQGTLAERLRAGG GIPAFYTP
Sbjct 64 LGLLLRAGRIRRTTGSYVGENKEFERQFLSGELEVELVPQGTLAERLRAGGAGIPAFYTP 123
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGTQVA+GGLPW YD SGG+AV SP KETR FD TYVLERGI DFALVHAW+GDRH
Sbjct 124 AGVGTQVAEGGLPWLYDGSGGIAVASPPKETRVFDDRTYVLERGIVCDFALVHAWKGDRH 183
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK 240
GNL+YR +AANFNP CA+AGR+TIAEVE LVEPGE+DPA VHTPG+FV RVVH P+ K+
Sbjct 184 GNLVYRASAANFNPLCATAGRVTIAEVEELVEPGELDPAQVHTPGIFVQRVVHAPDTEKR 243
Query 241 IERETV 246
IE+ TV
Sbjct 244 IEKRTV 249
>gi|229488553|ref|ZP_04382419.1| succinyl-CoA:3-ketoacid-coenzyme A transferase 1, precursor [Rhodococcus
erythropolis SK121]
gi|229324057|gb|EEN89812.1| succinyl-CoA:3-ketoacid-coenzyme A transferase 1, precursor [Rhodococcus
erythropolis SK121]
Length=252
Score = 380 bits (977), Expect = 7e-104, Method: Compositional matrix adjust.
Identities = 183/247 (75%), Positives = 210/247 (86%), Gaps = 0/247 (0%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
MDKV+ TAAEAVAD+ +G ++AVGGFGL G+PE LI AL++ G T LETVSNNCG DG G
Sbjct 5 MDKVIPTAAEAVADVPDGVTIAVGGFGLVGVPEILIDALLEQGATSLETVSNNCGTDGFG 64
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LG+LL+ RIRRTVSSYVG NKEFARQ+L+GELEVELTPQGTLAER+RAGG GIPAF+TP
Sbjct 65 LGVLLEKGRIRRTVSSYVGSNKEFARQYLSGELEVELTPQGTLAERMRAGGAGIPAFFTP 124
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGTQVADGGLP RYD SGG+AV SP KETR+FDGVTYV+ERGI D+ALVHAW+GDRH
Sbjct 125 AGVGTQVADGGLPLRYDGSGGIAVASPPKETRDFDGVTYVMERGIVADYALVHAWKGDRH 184
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK 240
GNL+YR + NFNP A++GRITIA+VEHLVEPGE+DPA +HTPG+ V RVVHV
Sbjct 185 GNLVYRASTQNFNPAAATSGRITIAQVEHLVEPGELDPAEIHTPGIHVQRVVHVGPVTVG 244
Query 241 IERETVR 247
IE TVR
Sbjct 245 IENRTVR 251
>gi|111018344|ref|YP_701316.1| 3-oxoacid CoA-transferase alpha subunit [Rhodococcus jostii RHA1]
gi|86611388|gb|ABD14379.1| succinyl CoA:3-oxoadipate CoA transferase alpha subunit [Rhodococcus
sp. DK17]
gi|110817874|gb|ABG93158.1| probable 3-oxoacid CoA-transferase alpha subunit [Rhodococcus
jostii RHA1]
Length=249
Score = 380 bits (975), Expect = 1e-103, Method: Compositional matrix adjust.
Identities = 187/247 (76%), Positives = 206/247 (84%), Gaps = 0/247 (0%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
++KV ATAAEAVAD+ +G+SLAVGGFGL GIP LI AL+ G TDLETVSNNCG DG G
Sbjct 2 VNKVFATAAEAVADVPDGASLAVGGFGLVGIPSVLIDALLAQGATDLETVSNNCGTDGFG 61
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LGLLL+ RIRRT+SSYVG NKEFARQ+L+GELEVELTPQGTLAER+RAGG GIPAFYTP
Sbjct 62 LGLLLEQHRIRRTISSYVGANKEFARQYLSGELEVELTPQGTLAERMRAGGAGIPAFYTP 121
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGTQVADGGLP RYD GG+AV S KETREFDG +VLER IRTDFALVHAW+GDR
Sbjct 122 AGVGTQVADGGLPIRYDGQGGIAVASKPKETREFDGEAFVLERAIRTDFALVHAWKGDRL 181
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK 240
GNL+YR A NFNP+ A AGRITIA+VE+LVEPGEIDPA VHTPG+FV RVV V
Sbjct 182 GNLVYRETARNFNPDAAGAGRITIAQVEYLVEPGEIDPAEVHTPGIFVQRVVEVGKQETG 241
Query 241 IERETVR 247
IE TVR
Sbjct 242 IENRTVR 248
>gi|226360464|ref|YP_002778242.1| 3-oxoadipate CoA-transferase alpha subunit [Rhodococcus opacus
B4]
gi|226238949|dbj|BAH49297.1| putative 3-oxoadipate CoA-transferase alpha subunit [Rhodococcus
opacus B4]
Length=249
Score = 380 bits (975), Expect = 1e-103, Method: Compositional matrix adjust.
Identities = 187/247 (76%), Positives = 206/247 (84%), Gaps = 0/247 (0%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
++KV ATAAEAVAD+ +G+SLAVGGFGL GIP LI AL+ G TDLETVSNNCG DG G
Sbjct 2 VNKVFATAAEAVADVPDGASLAVGGFGLVGIPSVLIDALLAQGATDLETVSNNCGTDGFG 61
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LGLLL+ RIRRT+SSYVG NKEFARQ+L+GELEVELTPQGTLAER+RAGG GIPAFYTP
Sbjct 62 LGLLLEQHRIRRTISSYVGANKEFARQYLSGELEVELTPQGTLAERMRAGGAGIPAFYTP 121
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGTQVADGGLP RYD GG+AV S KETREFDG +VLER IRTDFALVHAW+GDR
Sbjct 122 AGVGTQVADGGLPIRYDGKGGIAVASKPKETREFDGEAFVLERAIRTDFALVHAWKGDRL 181
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK 240
GNL+YR A NFNP+ A AGRITIA+VE+LVEPGEIDPA VHTPG+FV RVV V
Sbjct 182 GNLVYRETARNFNPDAAGAGRITIAQVEYLVEPGEIDPAEVHTPGIFVQRVVEVGKQETG 241
Query 241 IERETVR 247
IE TVR
Sbjct 242 IENRTVR 248
>gi|226308772|ref|YP_002768732.1| 3-oxoadipate CoA-transferase alpha subunit [Rhodococcus erythropolis
PR4]
gi|226187889|dbj|BAH35993.1| probable 3-oxoadipate CoA-transferase alpha subunit [Rhodococcus
erythropolis PR4]
Length=248
Score = 379 bits (973), Expect = 2e-103, Method: Compositional matrix adjust.
Identities = 182/247 (74%), Positives = 210/247 (86%), Gaps = 0/247 (0%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
MDKV+ TAAEAVAD+ +G ++AVGGFGL G+PE LI AL++ G T LETVSNNCG DG G
Sbjct 1 MDKVIPTAAEAVADVPDGVTIAVGGFGLVGVPEILIDALLEQGATSLETVSNNCGTDGFG 60
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LG+LL+ RIRRTVSSYVG NKEFARQ+L+GELEVELTPQGTLAER+RAGG GIPAF+TP
Sbjct 61 LGVLLEKGRIRRTVSSYVGSNKEFARQYLSGELEVELTPQGTLAERMRAGGAGIPAFFTP 120
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGTQVADGGLP RYD +GG+AV SP KETR+FDGVTYV+ERGI D+ALVHAW+GDRH
Sbjct 121 AGVGTQVADGGLPLRYDGNGGIAVASPPKETRDFDGVTYVMERGIVADYALVHAWKGDRH 180
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK 240
GNL+YR + NFNP A++GRITIA+VEHLVEPGE+DPA +HTPG+ V RVVHV
Sbjct 181 GNLVYRASTQNFNPAAATSGRITIAQVEHLVEPGELDPAEIHTPGIHVQRVVHVGPVTVG 240
Query 241 IERETVR 247
IE TVR
Sbjct 241 IENRTVR 247
>gi|312197454|ref|YP_004017515.1| 3-oxoacid CoA-transferase, A subunit [Frankia sp. EuI1c]
gi|311228790|gb|ADP81645.1| 3-oxoacid CoA-transferase, A subunit [Frankia sp. EuI1c]
Length=248
Score = 365 bits (938), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 185/246 (76%), Positives = 211/246 (86%), Gaps = 0/246 (0%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
MDKVVA AA+AVADI +G+SLAVGGFGLCGIP LI AL ++GV+ L+TVSNNCG+DG G
Sbjct 1 MDKVVAAAADAVADIGDGASLAVGGFGLCGIPSVLIDALHEAGVSGLKTVSNNCGVDGWG 60
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LG+LL+ +I RT SYVGENKEF RQFLAGELEVEL PQGTLAERLRAGG GIPAFYTP
Sbjct 61 LGVLLRAGKIARTTGSYVGENKEFERQFLAGELEVELVPQGTLAERLRAGGAGIPAFYTP 120
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGTQ+ADGGLP RYD GGVA+ S KETR FDGV YVLER I TDFALVHAW+GDRH
Sbjct 121 AGVGTQIADGGLPLRYDGKGGVALASEPKETRAFDGVDYVLERAIVTDFALVHAWKGDRH 180
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK 240
GNL+Y+ +AANFNP CA+AG++TIAEVE LVEPGE+DPA +HTPG+FV RVVH P+ K+
Sbjct 181 GNLVYKESAANFNPLCAAAGKVTIAEVEELVEPGELDPAEIHTPGIFVQRVVHAPDVVKR 240
Query 241 IERETV 246
IE+ TV
Sbjct 241 IEKRTV 246
>gi|111222565|ref|YP_713359.1| succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A [Frankia
alni ACN14a]
gi|111150097|emb|CAJ61792.1| succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (Succinyl
CoA:3-oxoacid CoA-transferase) (OXCT A) [Frankia alni
ACN14a]
Length=278
Score = 365 bits (937), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 186/246 (76%), Positives = 210/246 (86%), Gaps = 0/246 (0%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
+DKVVA+AA AVADI +G+SLAVGGFGLCGIP LI AL+ +GV +LETVSNNCG+D G
Sbjct 31 VDKVVASAALAVADIPDGASLAVGGFGLCGIPSVLIDALLAAGVRELETVSNNCGVDDWG 90
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LGLLL+ RIRRT SYVGENKEF RQFLAGELEVEL PQGTLAERLRAGG GIPAFYTP
Sbjct 91 LGLLLRAGRIRRTTGSYVGENKEFERQFLAGELEVELVPQGTLAERLRAGGAGIPAFYTP 150
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGTQVA+GG+P R+DASG VA+ SP KETR FDG YVLERGI D+ LVHAW+GDRH
Sbjct 151 AGVGTQVAEGGVPLRHDASGRVALASPPKETRVFDGTEYVLERGIVCDYGLVHAWRGDRH 210
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK 240
GNL+YR +AANFNP CA+AGR+TIAEVE LVEPGE+DP +HTPG+ V RVVH P+P K+
Sbjct 211 GNLIYRASAANFNPLCAAAGRVTIAEVEELVEPGELDPDQIHTPGILVQRVVHAPDPEKR 270
Query 241 IERETV 246
IER TV
Sbjct 271 IERRTV 276
>gi|331696556|ref|YP_004332795.1| 3-oxoacid CoA-transferase subunit A [Pseudonocardia dioxanivorans
CB1190]
gi|326951245|gb|AEA24942.1| 3-oxoacid CoA-transferase, A subunit [Pseudonocardia dioxanivorans
CB1190]
Length=256
Score = 363 bits (931), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 186/247 (76%), Positives = 209/247 (85%), Gaps = 0/247 (0%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
+DKVVATAAEAVADI +G+SLAVGGFG+ G+P L+AAL++ G TDLETVSNN G+DG G
Sbjct 2 IDKVVATAAEAVADIPDGASLAVGGFGMSGVPVTLVAALLEQGATDLETVSNNLGVDGFG 61
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LG LL RIRRT+ SYVG NKEFARQ+LAGE+EVELTPQGTLAERLRAGG GIPAFYTP
Sbjct 62 LGTLLAAGRIRRTIGSYVGNNKEFARQYLAGEVEVELTPQGTLAERLRAGGAGIPAFYTP 121
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGT VADGGLPWRY G VAV SPAKETREFDG TYVLE I TDFALVHAW+GDRH
Sbjct 122 AGVGTLVADGGLPWRYAPDGSVAVRSPAKETREFDGTTYVLEHAIVTDFALVHAWKGDRH 181
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK 240
GNL+YR ++ NFNP+CA+AGRITIAEVEHLVEPGE+DP +HTPG+FV RVV K+
Sbjct 182 GNLVYRRSSRNFNPDCATAGRITIAEVEHLVEPGELDPDEIHTPGIFVQRVVDAAGVEKQ 241
Query 241 IERETVR 247
IE T+R
Sbjct 242 IEFRTMR 248
>gi|325962781|ref|YP_004240687.1| 3-oxoacid CoA-transferase, subunit alpha [Arthrobacter phenanthrenivorans
Sphe3]
gi|323468868|gb|ADX72553.1| 3-oxoacid CoA-transferase, A subunit [Arthrobacter phenanthrenivorans
Sphe3]
Length=262
Score = 358 bits (919), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 176/246 (72%), Positives = 201/246 (82%), Gaps = 0/246 (0%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
+DKVVA+A EAVADI +G+SLAVGGFGLCGIP LI AL +G +DLETVSNNCG+D G
Sbjct 2 IDKVVASADEAVADIPDGASLAVGGFGLCGIPVTLIDALHRAGTSDLETVSNNCGVDDWG 61
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LG+LL+ RIRRT+SSYVGENKEFARQ+LAGELEV LTPQGTLAE+LRAGG GIPAFYT
Sbjct 62 LGILLRDGRIRRTISSYVGENKEFARQYLAGELEVVLTPQGTLAEKLRAGGAGIPAFYTK 121
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGTQV+DGGLP +YDA GG+A+ S KE R F GV YVLE + DF LVHAW+GDRH
Sbjct 122 AGVGTQVSDGGLPQKYDAEGGIAIASAPKEVRAFAGVDYVLEESLIPDFGLVHAWKGDRH 181
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK 240
GNL++ A NFNP CA AGRITIAEVE LVEPGE+DP +HTPG+FV RVV N K+
Sbjct 182 GNLVFHATAMNFNPLCAMAGRITIAEVEELVEPGELDPEHIHTPGIFVQRVVLAANAEKR 241
Query 241 IERETV 246
IE+ TV
Sbjct 242 IEKRTV 247
>gi|220912176|ref|YP_002487485.1| 3-oxoacid CoA-transferase subunit alpha [Arthrobacter chlorophenolicus
A6]
gi|219859054|gb|ACL39396.1| 3-oxoacid CoA-transferase, A subunit [Arthrobacter chlorophenolicus
A6]
Length=255
Score = 357 bits (917), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 176/246 (72%), Positives = 201/246 (82%), Gaps = 0/246 (0%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
+DKVVA+A EAVADI +GSSLAVGGFGLCGIP LI AL +G + LETVSNNCG+D G
Sbjct 2 IDKVVASADEAVADIPDGSSLAVGGFGLCGIPVTLIDALHRAGTSGLETVSNNCGVDDWG 61
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LG+LL+ RIRRT+SSYVGENKEFARQ+LAGELEV LTPQGTLAE+LRAGG GIPAFYT
Sbjct 62 LGILLRDGRIRRTISSYVGENKEFARQYLAGELEVVLTPQGTLAEKLRAGGAGIPAFYTK 121
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGTQV+DGGLP +YDA GG+AV S KE R F GV YVLE + DF LVHAW+GDRH
Sbjct 122 AGVGTQVSDGGLPQKYDADGGIAVASAPKEVRPFGGVDYVLEEALTPDFGLVHAWKGDRH 181
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK 240
GNL++ A NFNP CA AGR+TIAEVE LVEPGE+DP +HTPG+FV RVV P+ K+
Sbjct 182 GNLVFHATAMNFNPLCAMAGRVTIAEVEELVEPGELDPEHIHTPGIFVQRVVLAPDAEKR 241
Query 241 IERETV 246
IE+ TV
Sbjct 242 IEKRTV 247
>gi|312141729|ref|YP_004009065.1| 3-oxoacid CoA-transferase subunit a [Rhodococcus equi 103S]
gi|311891068|emb|CBH50387.1| 3-oxoacid CoA-transferase subunit A [Rhodococcus equi 103S]
Length=248
Score = 356 bits (913), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 178/246 (73%), Positives = 196/246 (80%), Gaps = 0/246 (0%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
M KV ATAAEAVADIA+GSSLAVGGFGLCGIP ALI L + GV+ LE SNNCG+D G
Sbjct 1 MSKVYATAAEAVADIADGSSLAVGGFGLCGIPSALIGGLAERGVSGLEVFSNNCGVDDWG 60
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LG+LL +IRR +SYVGENKEFARQ+L+GELEVELTPQGTLAER+RAGG GIPAFYTP
Sbjct 61 LGILLSAGQIRRVTASYVGENKEFARQYLSGELEVELTPQGTLAERMRAGGAGIPAFYTP 120
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGT V++GGLPWRY A G VAV SPAKETREF G TYVLE I DFALVHA GD
Sbjct 121 AGVGTPVSEGGLPWRYAADGSVAVASPAKETREFGGKTYVLEESIIADFALVHAEIGDTE 180
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK 240
GNL++ A NFNP A AGRITIA+VE LVEPGE+DPA VH PGVFV RVVH K+
Sbjct 181 GNLVFNKTAMNFNPLAAMAGRITIAQVEKLVEPGELDPAQVHLPGVFVQRVVHAGQQDKR 240
Query 241 IERETV 246
IE+ TV
Sbjct 241 IEKRTV 246
>gi|163839311|ref|YP_001623716.1| 3-ketoacid-CoA transferase, alpha subunit [Renibacterium salmoninarum
ATCC 33209]
gi|162952787|gb|ABY22302.1| 3-ketoacid-CoA transferase, alpha subunit [Renibacterium salmoninarum
ATCC 33209]
Length=271
Score = 353 bits (907), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 175/250 (70%), Positives = 202/250 (81%), Gaps = 4/250 (1%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
+DK V TAAEAVADI +G+SLAVGGFGLCGIP ALI AL G TDLETVSNNCG+D G
Sbjct 2 IDKTVPTAAEAVADIPDGASLAVGGFGLCGIPVALIDALHKQGSTDLETVSNNCGVDDWG 61
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LG+LL +RIRRTVSSYVGENKEFARQ+L+GELEV LTPQGTLAE+LRAGG GIPAF+T
Sbjct 62 LGILLNDRRIRRTVSSYVGENKEFARQYLSGELEVVLTPQGTLAEKLRAGGAGIPAFFTT 121
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGTQVA+GGLP +YD G VA+ S AKE REF+G YVLE + DFALVHA +GDRH
Sbjct 122 AGVGTQVAEGGLPQKYDGEGNVAIASSAKEVREFNGAEYVLEDSLTPDFALVHAAKGDRH 181
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVP----N 236
GNL++ A NFNP CA AG+ITIAEVE LVEPGE+DP +H PG+F+ R+VHVP +
Sbjct 182 GNLVFHATAMNFNPLCAMAGKITIAEVEELVEPGELDPEHIHLPGIFIQRLVHVPAGSAH 241
Query 237 PAKKIERETV 246
K+IE+ TV
Sbjct 242 AEKRIEKRTV 251
>gi|324998744|ref|ZP_08119856.1| 3-oxoadipate CoA-transferase scoa [Pseudonocardia sp. P1]
Length=248
Score = 353 bits (906), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 179/246 (73%), Positives = 206/246 (84%), Gaps = 0/246 (0%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
MDKVVA+AA+AVADI +G+SLAVGGFG+ G+P LIAAL++ G TDLET+SNN G+DG G
Sbjct 1 MDKVVASAADAVADIGDGASLAVGGFGMSGVPTVLIAALLEQGATDLETISNNLGVDGFG 60
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LG LL RIRRT+ SYVG NKEFARQ+L GELE+ELTPQGTLAERLRAGG GIPAFYTP
Sbjct 61 LGTLLSAGRIRRTIGSYVGNNKEFARQYLGGELELELTPQGTLAERLRAGGAGIPAFYTP 120
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGT VADGGLPWRY G VAV+SP KE REFDGV+YVLER + DF LVHAW+GDRH
Sbjct 121 AGVGTLVADGGLPWRYAPDGSVAVMSPEKEVREFDGVSYVLERALTPDFGLVHAWKGDRH 180
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK 240
GNL++R +A NFNP+ A+AGR+TIA+VEHLVEPGEIDP VHTPG+ V RV+HVP K
Sbjct 181 GNLVFRRSARNFNPDAAAAGRVTIAQVEHLVEPGEIDPDHVHTPGIHVQRVLHVPGVEKP 240
Query 241 IERETV 246
+E TV
Sbjct 241 VEFRTV 246
>gi|119962865|ref|YP_947298.1| 3-oxoacid CoA-transferase, A subunit [Arthrobacter aurescens
TC1]
gi|119949724|gb|ABM08635.1| 3-oxoacid CoA-transferase, A subunit [Arthrobacter aurescens
TC1]
Length=272
Score = 347 bits (890), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 170/246 (70%), Positives = 196/246 (80%), Gaps = 0/246 (0%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
+DKVVA+AAEAV DI +G+SLAVGGFGLCGIP +LI AL G DLETVSNNCG+D G
Sbjct 2 IDKVVASAAEAVKDIPDGASLAVGGFGLCGIPVSLIEALHSQGTADLETVSNNCGVDDWG 61
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LG+LL+ RIRRT+SSYVGENKEFARQ+LAGELEV LTPQGTLAE+LRAGG GIPAFYT
Sbjct 62 LGILLKDGRIRRTISSYVGENKEFARQYLAGELEVVLTPQGTLAEKLRAGGAGIPAFYTK 121
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGTQV++GGLP +YDA G VA+ S KE R F+ YVLE + DF LVHAW+GDRH
Sbjct 122 AGVGTQVSEGGLPQKYDAEGNVALASSPKEVRTFNDADYVLEESLTPDFGLVHAWKGDRH 181
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK 240
GNL++ A NFNP CA A R TIAEVE LVEPGE+DP +HTPG+FV RVV + K+
Sbjct 182 GNLVFHATAMNFNPLCAMAARTTIAEVEELVEPGELDPEHIHTPGIFVQRVVVATSHEKR 241
Query 241 IERETV 246
IE+ TV
Sbjct 242 IEKRTV 247
>gi|290963332|ref|YP_003494514.1| 3-oxoacid CoA-transferase subunit A [Streptomyces scabiei 87.22]
gi|260652858|emb|CBG75993.1| putative 3-oxoacid CoA-transferase subunit A [Streptomyces scabiei
87.22]
Length=251
Score = 345 bits (886), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 176/250 (71%), Positives = 200/250 (80%), Gaps = 3/250 (1%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
M+KV A+A EAVADI +G+SLAVGGFGL GIPE +I AL + G T LE VSNNCG+D G
Sbjct 1 MNKVSASAEEAVADICDGASLAVGGFGLSGIPETVIRALHEQGATGLEVVSNNCGVDDRG 60
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LG+LL RI R SYVGENKEFAR++L+GELEVEL PQGTLAERLRAGG GIPAFYTP
Sbjct 61 LGILLAAGRIARVTGSYVGENKEFARRYLSGELEVELVPQGTLAERLRAGGAGIPAFYTP 120
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGTQVADGGLPWRY A G VAV SP KETR+F G +VLE I TDFALV AW+GDRH
Sbjct 121 AGVGTQVADGGLPWRYAADGSVAVASPPKETRDFRGRPHVLEHAITTDFALVRAWRGDRH 180
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHV-PNPA- 238
GNL++R A+ANFNP A AGRIT+AEVE LV+PGE+DP +H PGVFV RVV + P A
Sbjct 181 GNLVFRKASANFNPLAAMAGRITVAEVEQLVDPGELDPGEIHLPGVFVQRVVPLTPEQAA 240
Query 239 -KKIERETVR 247
K+IE+ TVR
Sbjct 241 DKQIEKRTVR 250
>gi|226305324|ref|YP_002765282.1| succinyl-CoA--3-ketoacid CoA-transferase alpha subunit [Rhodococcus
erythropolis PR4]
gi|226184439|dbj|BAH32543.1| probable succinyl-CoA--3-ketoacid CoA-transferase alpha subunit
[Rhodococcus erythropolis PR4]
Length=251
Score = 345 bits (886), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 175/246 (72%), Positives = 193/246 (79%), Gaps = 0/246 (0%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
M KVV TAAEAVADIA+GS LAVGGFGLCGIP+ALIAA+ D TDLE SNNCG+D G
Sbjct 1 MSKVVNTAAEAVADIASGSRLAVGGFGLCGIPDALIAAIADGDATDLEVFSNNCGVDDYG 60
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LG+LL RI R +SYVGENKEFARQ+LAGELEVELTPQGTLAERLRAGG GIPAFYTP
Sbjct 61 LGILLGAHRIARVTASYVGENKEFARQYLAGELEVELTPQGTLAERLRAGGTGIPAFYTP 120
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGT +A+GGLPWRY+ G +AV SP K T F G TYVLE I DFALVHA GD
Sbjct 121 AGVGTPIAEGGLPWRYNPDGSIAVASPPKATAVFGGRTYVLEEAITADFALVHADYGDTE 180
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK 240
GNL++ A NFNP A AGRITIA+VE+LVEPG+IDPA VH PGVFV RVVH K+
Sbjct 181 GNLVFNKTAMNFNPLAAMAGRITIAQVENLVEPGDIDPAHVHLPGVFVARVVHTGPQEKR 240
Query 241 IERETV 246
IE+ TV
Sbjct 241 IEKRTV 246
>gi|229490572|ref|ZP_04384410.1| acetate CoA-transferase subunit alpha [Rhodococcus erythropolis
SK121]
gi|229322392|gb|EEN88175.1| acetate CoA-transferase subunit alpha [Rhodococcus erythropolis
SK121]
Length=251
Score = 344 bits (883), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 174/246 (71%), Positives = 193/246 (79%), Gaps = 0/246 (0%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
M KVV TAAEAVADIA+GS LAVGGFGLCGIP+ALIAA+ D TDLE SNNCG+D G
Sbjct 1 MSKVVNTAAEAVADIASGSRLAVGGFGLCGIPDALIAAIADGDATDLEVFSNNCGVDDYG 60
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LG+LL RI R +SYVGENKEFARQ+LAGELEVELTPQGTLAERLRAGG GIPAFYTP
Sbjct 61 LGILLGAHRIARVTASYVGENKEFARQYLAGELEVELTPQGTLAERLRAGGTGIPAFYTP 120
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGT +A+GGLPWRY+ G +AV SP K + F G TYVLE I DFALVHA GD
Sbjct 121 AGVGTPIAEGGLPWRYNPDGSIAVASPPKASAVFGGRTYVLEEAITADFALVHADYGDTE 180
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK 240
GNL++ A NFNP A AGRITIA+VE+LVEPG+IDPA VH PGVFV RVVH K+
Sbjct 181 GNLVFNKTAMNFNPLAAMAGRITIAQVENLVEPGDIDPAHVHLPGVFVARVVHTGPQEKR 240
Query 241 IERETV 246
IE+ TV
Sbjct 241 IEKRTV 246
>gi|5209337|gb|AAD40812.1|AF109386_1 succinyl CoA:3-oxoadipate CoA transferase alpha subunit [Streptomyces
sp. 2065]
Length=251
Score = 343 bits (879), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 173/249 (70%), Positives = 195/249 (79%), Gaps = 3/249 (1%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
MDKVVATA EAVAD+ +G++LAVGGFGL G+P LI AL + GV L VSNNCG G
Sbjct 1 MDKVVATADEAVADVPDGATLAVGGFGLSGVPNVLIQALFERGVGSLGVVSNNCGAMESG 60
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
L +LL RI R SY+G NKEFARQ+LAGELEVE+ PQGTLAERLRAGG GIPAFYTP
Sbjct 61 LAVLLSAGRIARVTGSYIGANKEFARQYLAGELEVEMIPQGTLAERLRAGGAGIPAFYTP 120
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGTQVA+GGLPWRYD SGGV + SPAKE REFDG YVLERGIRTDFALV A +GDRH
Sbjct 121 AGVGTQVAEGGLPWRYDGSGGVTLASPAKEVREFDGTEYVLERGIRTDFALVRAAKGDRH 180
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHV-PNPA- 238
GNL++ + NFNP A AG++TIAEVE LVEPGEIDP VH PG+FV RVV + P A
Sbjct 181 GNLVFNKSTRNFNPLAAMAGKVTIAEVEELVEPGEIDPDAVHLPGIFVQRVVALTPRQAA 240
Query 239 -KKIERETV 246
K+IE+ TV
Sbjct 241 DKRIEQRTV 249
>gi|302555472|ref|ZP_07307814.1| succinyl CoA:3-oxoadipate CoA transferase alpha subunit [Streptomyces
viridochromogenes DSM 40736]
gi|302473090|gb|EFL36183.1| succinyl CoA:3-oxoadipate CoA transferase alpha subunit [Streptomyces
viridochromogenes DSM 40736]
Length=251
Score = 342 bits (878), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 174/250 (70%), Positives = 196/250 (79%), Gaps = 3/250 (1%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
MDKVVATA EAVAD+ +G+SLAVGGFGL G+P LI AL + GVT + VSNNCG G
Sbjct 1 MDKVVATALEAVADVPDGASLAVGGFGLSGVPNVLIQALHERGVTGVSVVSNNCGAMESG 60
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
L +LL RI R SY+G NKEFARQ+LAGELEVEL PQGTLAERLRAGG GIPAFYTP
Sbjct 61 LAVLLAAGRIARVTGSYIGANKEFARQYLAGELEVELIPQGTLAERLRAGGAGIPAFYTP 120
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGTQVA+GGLPWRYD GGVA+ SP KE REFDG YVLERGIRTDFALV A +GDRH
Sbjct 121 AGVGTQVAEGGLPWRYDGQGGVALASPPKEVREFDGTPYVLERGIRTDFALVRAAKGDRH 180
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHV-PNPA- 238
GNL++ ++ NFNP A AGR+TIAEVE LVEPG IDP VH PG+FV RV+ + P A
Sbjct 181 GNLVFNKSSRNFNPLAAMAGRVTIAEVEELVEPGAIDPDAVHLPGIFVQRVLALTPQQAA 240
Query 239 -KKIERETVR 247
K+IE+ TVR
Sbjct 241 DKQIEQRTVR 250
>gi|291435863|ref|ZP_06575253.1| succinyl CoA:3-oxoadipate CoA transferase alpha subunit [Streptomyces
ghanaensis ATCC 14672]
gi|291338758|gb|EFE65714.1| succinyl CoA:3-oxoadipate CoA transferase alpha subunit [Streptomyces
ghanaensis ATCC 14672]
Length=251
Score = 342 bits (877), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 175/249 (71%), Positives = 197/249 (80%), Gaps = 3/249 (1%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
MDKVVA+A EAVAD+ +G+SLAVGGFGL G+P+ LI AL + GV L VSNNCG G
Sbjct 1 MDKVVASAGEAVADVPDGASLAVGGFGLSGVPDVLIRALHERGVGGLSVVSNNCGALESG 60
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
L +LL RI R SY+G NKEFARQ+LAGELEVEL PQGTLAERLRAGG GIPAFYTP
Sbjct 61 LAVLLAAGRIARVTGSYIGANKEFARQYLAGELEVELIPQGTLAERLRAGGAGIPAFYTP 120
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGTQVA+GGLPWRYD +GGVA+ SPAKE R FDGV YVLERGIRTD+ALV A +GDRH
Sbjct 121 AGVGTQVAEGGLPWRYDGNGGVALASPAKEVRTFDGVEYVLERGIRTDYALVRAARGDRH 180
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHV-PNPA- 238
GNL++ ++ NFNP A AGR+TIAEVE LVEPG +DP VH PGVFV RVV + P A
Sbjct 181 GNLVFNKSSRNFNPLAAMAGRVTIAEVEELVEPGAVDPDAVHLPGVFVQRVVALTPGQAA 240
Query 239 -KKIERETV 246
KKIER TV
Sbjct 241 DKKIERRTV 249
>gi|29828242|ref|NP_822876.1| 3-oxoacid CoA-transferase subunit A [Streptomyces avermitilis
MA-4680]
gi|29605344|dbj|BAC69411.1| putative 3-oxoadipate succinyl-CoA transferase alpha subunit
[Streptomyces avermitilis MA-4680]
Length=260
Score = 340 bits (873), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 171/249 (69%), Positives = 192/249 (78%), Gaps = 3/249 (1%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
MDKVVATA EAVAD+ +G++LAVGGFGL G+P LI AL + GV L VSNNCG G
Sbjct 1 MDKVVATALEAVADVPDGATLAVGGFGLSGVPNVLIQALYERGVAGLGVVSNNCGAMESG 60
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
L +LL RI R SY+G NKEFARQ+LAGELEVE+ PQGTLAERLRAGG GIPAFYTP
Sbjct 61 LAVLLAAGRIARVTGSYIGANKEFARQYLAGELEVEMIPQGTLAERLRAGGAGIPAFYTP 120
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGTQVADGGLPWRYD SGGVA+ SP KE REFDG YVLE GIRTDFALV A +GDRH
Sbjct 121 AGVGTQVADGGLPWRYDGSGGVALASPPKEVREFDGTEYVLEHGIRTDFALVRAAKGDRH 180
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVP---NP 237
GNL++ +A NFNP A AGR+TIAEVE LVEPG +DP VH PG+FV RV+ +
Sbjct 181 GNLVFNKSARNFNPLAAMAGRVTIAEVEELVEPGGLDPDAVHVPGIFVQRVIALSPEQTN 240
Query 238 AKKIERETV 246
AK IE+ TV
Sbjct 241 AKMIEKRTV 249
>gi|116669949|ref|YP_830882.1| 3-oxoacid CoA-transferase subunit A [Arthrobacter sp. FB24]
gi|116610058|gb|ABK02782.1| 3-oxoacid CoA-transferase, A subunit [Arthrobacter sp. FB24]
Length=274
Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 174/246 (71%), Positives = 198/246 (81%), Gaps = 0/246 (0%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
+DKVVA+A AVADI +G+SLAVGGFGLCGIP ALI AL G T LETVSNNCG+D G
Sbjct 2 IDKVVASAEAAVADIPDGASLAVGGFGLCGIPVALIDALHRHGTTGLETVSNNCGVDDWG 61
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LG+LL+ RIRRT+SSYVGENKEFARQ+L+GELEV LTPQGTLAE+LRAGG GIPAFYTP
Sbjct 62 LGILLKDGRIRRTISSYVGENKEFARQYLSGELEVVLTPQGTLAEKLRAGGAGIPAFYTP 121
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGTQV+DGGLP +YDA G +A+ S KE R F+G YVLE + DF LVHAW+GDRH
Sbjct 122 AGVGTQVSDGGLPQKYDADGTIAIASAPKEVRTFNGADYVLEESLTPDFGLVHAWKGDRH 181
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK 240
GNL++ A NFNP CA AGRITIAEVE LVEPGE+DP VH PG+FV RVV P K+
Sbjct 182 GNLVFHATAMNFNPLCAMAGRITIAEVEELVEPGELDPEHVHVPGIFVQRVVLAPRGEKR 241
Query 241 IERETV 246
IE+ TV
Sbjct 242 IEKRTV 247
>gi|111020767|ref|YP_703739.1| 3-oxoacid CoA-transferase alpha subunit [Rhodococcus jostii RHA1]
gi|110820297|gb|ABG95581.1| 3-oxoacid CoA-transferase alpha subunit [Rhodococcus jostii RHA1]
Length=252
Score = 339 bits (870), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 168/244 (69%), Positives = 189/244 (78%), Gaps = 0/244 (0%)
Query 3 KVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVGLG 62
KV +AAEAVADI +G+SLAVGGFGLCGIP+ LIAA+ TDLE SNNCG+DG GLG
Sbjct 4 KVFGSAAEAVADITSGASLAVGGFGLCGIPDELIAAIAAGDATDLEVFSNNCGVDGHGLG 63
Query 63 LLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTPAG 122
+LL H RIRR +SYVGENKEFARQ+L GELEVELTPQGTLAE+LRAGG GIPAF+TPAG
Sbjct 64 ILLAHSRIRRVTASYVGENKEFARQYLTGELEVELTPQGTLAEKLRAGGAGIPAFFTPAG 123
Query 123 VGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRHGN 182
VGT V+DGGLPWRY A G VAV SP KE REF G YVLE I DFALVHA GD GN
Sbjct 124 VGTPVSDGGLPWRYAADGSVAVASPPKEIREFAGRQYVLEESITADFALVHARIGDAEGN 183
Query 183 LMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKKIE 242
L++ AA NFNP A A R+ IA+VE LVEPG +DPA VH PG+FV R+VH K+IE
Sbjct 184 LVFAKAAGNFNPLAAMASRVCIAQVEQLVEPGVLDPARVHLPGIFVDRIVHTGTQDKQIE 243
Query 243 RETV 246
+ TV
Sbjct 244 KRTV 247
>gi|345003702|ref|YP_004806556.1| 3-oxoacid CoA-transferase subunit A [Streptomyces sp. SirexAA-E]
gi|344319328|gb|AEN14016.1| 3-oxoacid CoA-transferase, A subunit [Streptomyces sp. SirexAA-E]
Length=250
Score = 338 bits (868), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 173/250 (70%), Positives = 199/250 (80%), Gaps = 3/250 (1%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
MDKVV +AAEAV DI G++LAVGGFGLCGIP LI A++ SG L+ VSNN G+D G
Sbjct 1 MDKVVPSAAEAVEDIGRGATLAVGGFGLCGIPAVLIDAVLRSGADRLQVVSNNAGVDDWG 60
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LGLLL RIRR V+SYVGENKEFARQ+LAGELEVELTPQGTLAERLRAGG GIPAF+T
Sbjct 61 LGLLLAAGRIRRIVASYVGENKEFARQYLAGELEVELTPQGTLAERLRAGGSGIPAFFTA 120
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
GVGTQVA+GGLPW+YD +GGV + SPAK+T+EFDG TYVLE + D ALV A +GDRH
Sbjct 121 TGVGTQVAEGGLPWKYDGAGGVEIASPAKQTQEFDGGTYVLEHAVVADAALVRAARGDRH 180
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHV-PNPA- 238
GNL++ AA NFNP A AGRI +AEVE LVEPGE+DP VH PGV+VHRVV + P A
Sbjct 181 GNLVFDKAARNFNPLAAMAGRICVAEVEELVEPGELDPDQVHLPGVYVHRVVALSPEQAA 240
Query 239 -KKIERETVR 247
K+IE+ TVR
Sbjct 241 DKRIEKRTVR 250
>gi|257054769|ref|YP_003132601.1| 3-oxoacid CoA-transferase, A subunit [Saccharomonospora viridis
DSM 43017]
gi|256584641|gb|ACU95774.1| 3-oxoacid CoA-transferase, A subunit [Saccharomonospora viridis
DSM 43017]
Length=255
Score = 338 bits (866), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 168/235 (72%), Positives = 185/235 (79%), Gaps = 0/235 (0%)
Query 14 DIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVGLGLLLQHKRIRRT 73
DI +G+SLAVGGFGLCGIP+ LIAA+ + TDLE SNNCG+DG GLG+LL+ RIRR
Sbjct 15 DIPSGASLAVGGFGLCGIPDTLIAAIAEGEATDLEVFSNNCGVDGHGLGVLLEAGRIRRI 74
Query 74 VSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTPAGVGTQVADGGLP 133
+SYVGENKEFARQ+LAGELEVELTPQGTLAERLRAGG GIPAFYTPAGVGT V DGGLP
Sbjct 75 TASYVGENKEFARQYLAGELEVELTPQGTLAERLRAGGAGIPAFYTPAGVGTPVGDGGLP 134
Query 134 WRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRHGNLMYRHAAANFN 193
WRYDA G VAV SP KE R F+G Y+LE I DFALVHA GD GNL++ A NFN
Sbjct 135 WRYDAEGNVAVASPPKEVRVFNGKRYLLEEAIVADFALVHAEIGDTQGNLVFNKTAMNFN 194
Query 194 PECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKKIERETVRQ 248
P A AGRITIAEVE LVEPGE+DPA VH PGVFV R+VH K IE+ TVRQ
Sbjct 195 PLAAMAGRITIAEVERLVEPGELDPAQVHLPGVFVQRIVHTGPQNKLIEKRTVRQ 249
>gi|84498127|ref|ZP_00996924.1| putative 3-oxoadipate CoA-transferase subunit A [Janibacter sp.
HTCC2649]
gi|84381627|gb|EAP97510.1| putative 3-oxoadipate CoA-transferase subunit A [Janibacter sp.
HTCC2649]
Length=259
Score = 337 bits (865), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 169/253 (67%), Positives = 199/253 (79%), Gaps = 7/253 (2%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
MDKVV++AA A+ D+ +G+SLAVGGFGLCGIP LIA L GV DLE SNNCG+D G
Sbjct 1 MDKVVSSAAAALEDVRDGASLAVGGFGLCGIPSVLIAELHAKGVRDLEVFSNNCGVDDWG 60
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LG+LL +K+IRR VSSYVGENKEFARQ+L GELEVELTPQGTLAERLRAGG GI AF+TP
Sbjct 61 LGILLGNKQIRRMVSSYVGENKEFARQYLQGELEVELTPQGTLAERLRAGGAGIAAFFTP 120
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREF----DGVTYVLERGIRTDFALVHAWQ 176
GVG+QVADGGLPWRY A G VA+ SP KETR F + T+VLE GI DF LV AW+
Sbjct 121 TGVGSQVADGGLPWRYAADGTVALASPPKETRTFGLGGEERTFVLEEGIAADFGLVRAWK 180
Query 177 GDRHGNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHV-P 235
GDRHGNL++ ++ NFNP CA +GR+TIAEVE LVEPGE+DP +H PG++V RVV + P
Sbjct 181 GDRHGNLIFNKSSRNFNPLCAMSGRVTIAEVEELVEPGELDPDQIHLPGIYVQRVVPLTP 240
Query 236 NPA--KKIERETV 246
A K+IE+ TV
Sbjct 241 EQAQDKRIEKRTV 253
>gi|297203774|ref|ZP_06921171.1| succinyl CoA:3-oxoadipate CoA transferase alpha subunit [Streptomyces
sviceus ATCC 29083]
gi|197711824|gb|EDY55858.1| succinyl CoA:3-oxoadipate CoA transferase alpha subunit [Streptomyces
sviceus ATCC 29083]
Length=253
Score = 337 bits (865), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 172/249 (70%), Positives = 191/249 (77%), Gaps = 3/249 (1%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
MDKVVATA EAVAD+ G+SLAVGGFGL G+P LI AL + G L VSNNCG G
Sbjct 3 MDKVVATAREAVADVPEGASLAVGGFGLSGVPNVLIQALYEQGTGALSVVSNNCGAMESG 62
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
L +LL RI R SY+G NKEFARQ+LAGELEVE+ PQGTLAERLRAGG GIPAF+TP
Sbjct 63 LAVLLAAGRIARVTGSYIGANKEFARQYLAGELEVEMIPQGTLAERLRAGGAGIPAFFTP 122
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGTQVADGGLPWRYD GGVAV SP KE REFDG YVLE GIRTDFALV A +GDRH
Sbjct 123 AGVGTQVADGGLPWRYDGHGGVAVASPPKEVREFDGTEYVLEHGIRTDFALVRAARGDRH 182
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHV-PNPA- 238
GNL++ + NFNP A AGR+TIAEVE LVEPGEIDP VH PG+FV RV+ + P A
Sbjct 183 GNLVFNKSTRNFNPLAAMAGRVTIAEVEELVEPGEIDPDAVHLPGIFVQRVIALTPEQAR 242
Query 239 -KKIERETV 246
K+IE+ TV
Sbjct 243 DKRIEQRTV 251
>gi|317124407|ref|YP_004098519.1| 3-oxoacid CoA-transferase, subunit alpha [Intrasporangium calvum
DSM 43043]
gi|315588495|gb|ADU47792.1| 3-oxoacid CoA-transferase, A subunit [Intrasporangium calvum
DSM 43043]
Length=269
Score = 337 bits (865), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 167/254 (66%), Positives = 203/254 (80%), Gaps = 7/254 (2%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
MDKVV+T EA+A I++G SLAVGGFGLCGIP LIAA+ D+G+ DLE +SNNCG+D G
Sbjct 1 MDKVVSTPQEAIAGISDGMSLAVGGFGLCGIPSVLIAAIHDAGIQDLEAISNNCGVDDWG 60
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LG+LL+ KRIRR V+SYVGENKEF RQ+L GELEVELTPQGTLAERLRAGG+GIPAF+T
Sbjct 61 LGILLKDKRIRRMVASYVGENKEFERQYLHGELEVELTPQGTLAERLRAGGVGIPAFFTI 120
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREF--DG--VTYVLERGIRTDFALVHAWQ 176
G GTQVA+GGLPW+YDA G V + SP K+T++F DG T+VLE IR D+AL+ A +
Sbjct 121 TGAGTQVAEGGLPWKYDADGNVVLASPPKQTQDFEVDGETKTFVLEEAIRADYALIRAAK 180
Query 177 GDRHGNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHV-P 235
GDRHGNL++ +A NFNP CA +G++ IAEVE LVEPGE+ P VH PG+FVHRV+ + P
Sbjct 181 GDRHGNLVFNQSARNFNPLCAMSGKVAIAEVEQLVEPGELHPDEVHLPGIFVHRVLPLSP 240
Query 236 NPA--KKIERETVR 247
A K+IER TVR
Sbjct 241 EQAAEKRIERRTVR 254
>gi|291442080|ref|ZP_06581470.1| 3-oxoadipate CoA-transferase subunit A [Streptomyces ghanaensis
ATCC 14672]
gi|291344975|gb|EFE71931.1| 3-oxoadipate CoA-transferase subunit A [Streptomyces ghanaensis
ATCC 14672]
Length=252
Score = 337 bits (864), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 173/248 (70%), Positives = 195/248 (79%), Gaps = 3/248 (1%)
Query 2 DKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVGL 61
DKVVA+A EAVAD+ +G+SLAVGGFGL G+P+ LI AL + GV L VSNNCG GL
Sbjct 3 DKVVASAGEAVADVPDGASLAVGGFGLSGVPDVLIRALHERGVGGLSVVSNNCGALESGL 62
Query 62 GLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTPA 121
+LL RI R SY+G NKEFARQ+LAGELEVEL PQGTLAERLRAGG GIPAFYTPA
Sbjct 63 AVLLAAGRIARVTGSYIGANKEFARQYLAGELEVELIPQGTLAERLRAGGAGIPAFYTPA 122
Query 122 GVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRHG 181
GVGTQVA+GGLPWRYD +GGVA+ SP KE R FDG+ YVLERGIRTD+ALV A +GDRHG
Sbjct 123 GVGTQVAEGGLPWRYDGTGGVALASPPKEVRTFDGMQYVLERGIRTDYALVRAARGDRHG 182
Query 182 NLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHV-PNPA-- 238
NL++ ++ NFNP A AGR+TIAEVE LVEPG IDP VH PGVFV RVV + P A
Sbjct 183 NLVFNKSSRNFNPLAAMAGRVTIAEVEELVEPGAIDPDAVHLPGVFVQRVVALTPGQAAD 242
Query 239 KKIERETV 246
KKIER TV
Sbjct 243 KKIERRTV 250
>gi|229490114|ref|ZP_04383962.1| acetate CoA-transferase subunit alpha [Rhodococcus erythropolis
SK121]
gi|229322990|gb|EEN88763.1| acetate CoA-transferase subunit alpha [Rhodococcus erythropolis
SK121]
Length=263
Score = 337 bits (863), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 164/244 (68%), Positives = 191/244 (79%), Gaps = 0/244 (0%)
Query 3 KVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVGLG 62
KV +AA+AVADI +G++LAVGGFGLCGIP+ LI A+ + TDLE SNNCG+D GLG
Sbjct 12 KVYESAADAVADIVDGATLAVGGFGLCGIPDVLIDAIAATSATDLEVFSNNCGVDDHGLG 71
Query 63 LLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTPAG 122
+LL RIRR +SYVGENKEFARQ+LAGELEVELTPQGTLAERLRAGG GIPAF+TPAG
Sbjct 72 ILLSAGRIRRVTASYVGENKEFARQYLAGELEVELTPQGTLAERLRAGGTGIPAFFTPAG 131
Query 123 VGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRHGN 182
VG+ ++DGG+PWRYDA G +A+ SP KETR F YV+E I D+ALVHA GD GN
Sbjct 132 VGSPISDGGMPWRYDADGSIAIASPPKETRVFGTKRYVMEEAINADYALVHAVLGDTDGN 191
Query 183 LMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKKIE 242
L++ A NFNP A AGRITIA+VE LVEPGEIDPA+VH PGVFV RVVH K+IE
Sbjct 192 LVFDKTAMNFNPLAAMAGRITIAQVERLVEPGEIDPASVHLPGVFVQRVVHTGPQNKRIE 251
Query 243 RETV 246
+ TV
Sbjct 252 KRTV 255
>gi|226304698|ref|YP_002764656.1| succinyl-CoA--3-ketoacid CoA-transferase alpha subunit [Rhodococcus
erythropolis PR4]
gi|226183813|dbj|BAH31917.1| probable succinyl-CoA--3-ketoacid CoA-transferase alpha subunit
[Rhodococcus erythropolis PR4]
Length=255
Score = 337 bits (863), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 162/244 (67%), Positives = 191/244 (79%), Gaps = 0/244 (0%)
Query 3 KVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVGLG 62
KV +AA+AVADI +G++LAVGGFGLCGIP+ LI A+ + TDLE SNNCG+D GLG
Sbjct 4 KVYESAADAVADIVDGATLAVGGFGLCGIPDVLIDAIAATSATDLEVFSNNCGVDDHGLG 63
Query 63 LLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTPAG 122
+LL RIRR +SYVGENKEFARQ+LAGELEVELTPQGTLAERLRAGG GIPAF+TPAG
Sbjct 64 ILLSAGRIRRVTASYVGENKEFARQYLAGELEVELTPQGTLAERLRAGGTGIPAFFTPAG 123
Query 123 VGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRHGN 182
VG+ ++DGG+PWRYDA G +A+ SP KETR F YV+E I D+ALVHA GD GN
Sbjct 124 VGSPISDGGMPWRYDADGSIAIASPPKETRVFGTKRYVMEEAINADYALVHAVLGDTEGN 183
Query 183 LMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKKIE 242
L++ A NFNP A AGR+TIA+VE LVEPGEIDPA+VH PGVFV R+VH K+IE
Sbjct 184 LVFDKTAMNFNPLAAMAGRVTIAQVERLVEPGEIDPASVHLPGVFVQRIVHTGPQNKRIE 243
Query 243 RETV 246
+ TV
Sbjct 244 KRTV 247
>gi|329937066|ref|ZP_08286695.1| 3-oxoadipate CoA-transferase subunit A [Streptomyces griseoaurantiacus
M045]
gi|329303673|gb|EGG47558.1| 3-oxoadipate CoA-transferase subunit A [Streptomyces griseoaurantiacus
M045]
Length=251
Score = 336 bits (862), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 172/249 (70%), Positives = 194/249 (78%), Gaps = 3/249 (1%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
MDKV+ATAAEAVADI G+SLAVGGFGL G+P LI AL + GV L VSNNCG G
Sbjct 1 MDKVIATAAEAVADIPPGASLAVGGFGLAGVPNVLIQALYERGVGGLSVVSNNCGAMESG 60
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
L +LL RI R SY+G NKEFARQ+LAGELE+EL PQGTLAERLRAGG GIPAFYTP
Sbjct 61 LAVLLAAGRIARVTGSYIGANKEFARQYLAGELELELIPQGTLAERLRAGGAGIPAFYTP 120
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGTQVA+GGLPWRYD GGVA+ SP KE REF+G YVLERGIRTDFALV A +GDRH
Sbjct 121 AGVGTQVAEGGLPWRYDGEGGVALASPPKEVREFEGGRYVLERGIRTDFALVRAARGDRH 180
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHV-PNPA- 238
GNL++ ++ NFNP A AG++ IAEVE LVEPG+IDP VH PGVFV RVV + P A
Sbjct 181 GNLVFSKSSRNFNPLAAMAGKVAIAEVEELVEPGDIDPDAVHLPGVFVRRVVALTPEQAA 240
Query 239 -KKIERETV 246
K+IE+ TV
Sbjct 241 DKRIEKRTV 249
>gi|269126577|ref|YP_003299947.1| 3-oxoacid CoA-transferase subunit A [Thermomonospora curvata
DSM 43183]
gi|268311535|gb|ACY97909.1| 3-oxoacid CoA-transferase, A subunit [Thermomonospora curvata
DSM 43183]
Length=252
Score = 335 bits (860), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 176/250 (71%), Positives = 192/250 (77%), Gaps = 3/250 (1%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
MDKVVATA EAVADI +G+S+AVGGFGL G+P LI AL + GV L VSNNCG G
Sbjct 1 MDKVVATAREAVADIGDGASVAVGGFGLSGVPNVLIEALHERGVRGLHVVSNNCGAMDSG 60
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
L +LL +I R SY+G NKEFAR++LAGE+E EL PQGTLAERLRAGG GIPAFYTP
Sbjct 61 LAVLLAAGQIARVTGSYIGTNKEFARRYLAGEVEFELIPQGTLAERLRAGGCGIPAFYTP 120
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGTQVADGGLPWRYD GGVAV SP KETREFDGV VLER I TDFALV A +GDRH
Sbjct 121 AGVGTQVADGGLPWRYDGRGGVAVASPPKETREFDGVECVLERAITTDFALVRAAKGDRH 180
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHV-PNPA- 238
GNL++ AA NFNP A AGRI IAEVE LVEPG IDP VH PG+FV RVV + P A
Sbjct 181 GNLVFAKAARNFNPLAAMAGRIAIAEVEQLVEPGRIDPDQVHLPGIFVQRVVALTPEQAA 240
Query 239 -KKIERETVR 247
KKIER TVR
Sbjct 241 DKKIERRTVR 250
>gi|111221929|ref|YP_712723.1| acetyl-CoA:acetoacetyl-CoA transferase subunit alpha [Frankia
alni ACN14a]
gi|111149461|emb|CAJ61152.1| acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit [Frankia
alni ACN14a]
Length=250
Score = 335 bits (859), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 175/247 (71%), Positives = 194/247 (79%), Gaps = 0/247 (0%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
MDK +A EA+ADIA+G+SLAVGGFGLCGIP LI AL+ G TDLETVSNNCG+DG G
Sbjct 1 MDKTCGSADEAIADIADGASLAVGGFGLCGIPHVLIQALLARGTTDLETVSNNCGVDGAG 60
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LGLLL RIRRT SYVGENKEFARQ+L GELE+EL PQGTLAERLRAGG GIPAF+TP
Sbjct 61 LGLLLAAGRIRRTTGSYVGENKEFARQYLGGELELELCPQGTLAERLRAGGSGIPAFFTP 120
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGT VADGGLPWRY +G VAV SPAKETR F YVLE GI TDFALV A GDRH
Sbjct 121 AGVGTAVADGGLPWRYTPAGDVAVASPAKETRRFGDREYVLEHGITTDFALVRAAVGDRH 180
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK 240
GNL+Y +A NFNP CA AGRIT+AEVE LVEPG++ VHTPG+FV RV+ V K
Sbjct 181 GNLVYARSAQNFNPLCAMAGRITVAEVERLVEPGDLPAEQVHTPGIFVQRVIEVGPDGKG 240
Query 241 IERETVR 247
IE+ +R
Sbjct 241 IEKRMIR 247
>gi|120405843|ref|YP_955672.1| 3-oxoacid CoA-transferase subunit A [Mycobacterium vanbaalenii
PYR-1]
gi|119958661|gb|ABM15666.1| 3-oxoacid CoA-transferase, A subunit [Mycobacterium vanbaalenii
PYR-1]
Length=254
Score = 334 bits (857), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 169/246 (69%), Positives = 188/246 (77%), Gaps = 0/246 (0%)
Query 2 DKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVGL 61
KV +AA AV+DIA G++LAVGGFGLCGIP+ALI A+ S TDLE SNNCG+D GL
Sbjct 3 SKVYDSAAAAVSDIATGATLAVGGFGLCGIPDALIEAVAASSTTDLEVFSNNCGVDDHGL 62
Query 62 GLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTPA 121
G+LL RIRR +SYVGENKEFARQ+LAGELEVELTPQGTLAERLRAGG GIPAF+TPA
Sbjct 63 GVLLSLGRIRRVTASYVGENKEFARQYLAGELEVELTPQGTLAERLRAGGTGIPAFFTPA 122
Query 122 GVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRHG 181
GVGT VADGG+PWRY A G VA+ SP KETR F YVLE I DFALVHA GD G
Sbjct 123 GVGTPVADGGMPWRYAADGSVAIASPPKETRVFGEKRYVLEEAIIADFALVHARLGDTDG 182
Query 182 NLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKKI 241
NL++ A NFNP A AGRITIA+VE LVEPG I+P VH PGVFV RVVH K+I
Sbjct 183 NLVFEKTAMNFNPLAAMAGRITIAQVEELVEPGAIEPGRVHLPGVFVQRVVHTGPQTKRI 242
Query 242 ERETVR 247
E+ TVR
Sbjct 243 EKRTVR 248
>gi|126348273|emb|CAJ89994.1| putative 3-oxoacid CoA-transferase subunit A [Streptomyces ambofaciens
ATCC 23877]
Length=251
Score = 334 bits (857), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 169/249 (68%), Positives = 195/249 (79%), Gaps = 3/249 (1%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
M+KV A A EAVADI +G+SLAVGGFGL G+PE LI AL + G + LE VSNNCG+DG G
Sbjct 1 MNKVRAGAVEAVADIPDGASLAVGGFGLSGVPEVLIRALYERGTSGLEVVSNNCGVDGRG 60
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LG+LL RI R SYVGENKEFARQ+L+GELEVELTPQGTLAERLRAGG GIPAFYTP
Sbjct 61 LGVLLAAGRIARVTGSYVGENKEFARQYLSGELEVELTPQGTLAERLRAGGAGIPAFYTP 120
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVG+QVA+GGLPWRY G VAV SP KETR+F G +VLE GI TDFALV AW+GD H
Sbjct 121 AGVGSQVANGGLPWRYAPDGTVAVTSPPKETRDFAGRAHVLEHGITTDFALVRAWRGDHH 180
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHV---PNP 237
GNL++R AAANFNP A AGR+T+AEVE LVEPG + P +H PG++V RVV +
Sbjct 181 GNLVFRRAAANFNPLAAMAGRVTVAEVEELVEPGALHPDEIHLPGIYVQRVVALTAGQAA 240
Query 238 AKKIERETV 246
K+IE+ TV
Sbjct 241 DKQIEKRTV 249
>gi|294632355|ref|ZP_06710915.1| succinyl-CoA:3-ketoacid-coenzyme A transferase, A subunit [Streptomyces
sp. e14]
gi|292835688|gb|EFF94037.1| succinyl-CoA:3-ketoacid-coenzyme A transferase, A subunit [Streptomyces
sp. e14]
Length=261
Score = 334 bits (857), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 169/246 (69%), Positives = 189/246 (77%), Gaps = 3/246 (1%)
Query 4 VVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVGLGL 63
+VATAAEAVAD+ +G+SLAVGGFGL G+P LI AL + G L VSNNCG GL +
Sbjct 1 MVATAAEAVADVPDGASLAVGGFGLSGVPNVLIQALYERGTGSLSVVSNNCGALDSGLAV 60
Query 64 LLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTPAGV 123
LL RI R SY+G NKEFARQ+LAGELEVEL PQGTLAERLRAGG GIPAFYTPAGV
Sbjct 61 LLAAGRIARVTGSYIGANKEFARQYLAGELEVELIPQGTLAERLRAGGAGIPAFYTPAGV 120
Query 124 GTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRHGNL 183
GTQVADGGLPWRYD SGGVA+ SP KE R FDGV YVLERGIRTDFALV A +GDRHGNL
Sbjct 121 GTQVADGGLPWRYDGSGGVALASPPKEVRAFDGVEYVLERGIRTDFALVRAARGDRHGNL 180
Query 184 MYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPA---KK 240
++ + NFNP A AG++TIAEVE LVEPG IDP VH PG+FV RVV + K+
Sbjct 181 VFNRSTRNFNPLAAMAGKVTIAEVEELVEPGGIDPDAVHLPGIFVQRVVALTAEQAADKR 240
Query 241 IERETV 246
IE+ TV
Sbjct 241 IEKRTV 246
>gi|325673011|ref|ZP_08152705.1| succinyl-CoA:3-ketoacid-coenzyme A transferase [Rhodococcus equi
ATCC 33707]
gi|325556264|gb|EGD25932.1| succinyl-CoA:3-ketoacid-coenzyme A transferase [Rhodococcus equi
ATCC 33707]
Length=248
Score = 332 bits (852), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 176/246 (72%), Positives = 196/246 (80%), Gaps = 0/246 (0%)
Query 1 MDKVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVG 60
M KV ATAA+AVADIA+GSSLAVGGFGLCGIP ALI L + GV+ LE SNNCG+D G
Sbjct 1 MSKVYATAADAVADIADGSSLAVGGFGLCGIPSALIGGLAERGVSGLEVFSNNCGVDDWG 60
Query 61 LGLLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTP 120
LG+LL +IRR +SYVGENKEFARQ+L+GELEVELTPQGTLAER+RAGG GIPAFYTP
Sbjct 61 LGILLSAGQIRRVTASYVGENKEFARQYLSGELEVELTPQGTLAERMRAGGAGIPAFYTP 120
Query 121 AGVGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRH 180
AGVGT V++GGLPWRY A G VAV SPAKETREF G TYVLE I DFALVHA GD
Sbjct 121 AGVGTPVSEGGLPWRYAADGSVAVASPAKETREFGGKTYVLEESIVADFALVHAEIGDTE 180
Query 181 GNLMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKK 240
GNL++ A NFNP A AGR+TIA+VE LVEPGE+DPA VH PGVFV RVVH K+
Sbjct 181 GNLVFNKTAMNFNPLAAMAGRVTIAQVEKLVEPGELDPAQVHLPGVFVQRVVHAGQQDKR 240
Query 241 IERETV 246
IE+ TV
Sbjct 241 IEKRTV 246
>gi|226363174|ref|YP_002780956.1| succinyl-CoA--3-ketoacid CoA-transferase alpha subunit [Rhodococcus
opacus B4]
gi|226241663|dbj|BAH52011.1| succinyl-CoA--3-ketoacid CoA-transferase alpha subunit [Rhodococcus
opacus B4]
Length=255
Score = 330 bits (847), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 163/244 (67%), Positives = 192/244 (79%), Gaps = 0/244 (0%)
Query 3 KVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVGLG 62
+V T EAVAD+++G+++AVGGFGLCGIP++LI AL DSGV +LE SNNCG+D GLG
Sbjct 4 RVFDTPEEAVADVSDGATIAVGGFGLCGIPDSLIRALADSGVGNLEVFSNNCGVDDHGLG 63
Query 63 LLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTPAG 122
+LL ++IRR +SYVGENKEFARQ+L+GELEVELTPQGTLAERLRAGG GIPAF+TPAG
Sbjct 64 ILLSARQIRRVTASYVGENKEFARQYLSGELEVELTPQGTLAERLRAGGAGIPAFFTPAG 123
Query 123 VGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRHGN 182
VG+ VADGGLPWRY A G VA+ SPAKETR+F YVLE GI DFALVHA +GD GN
Sbjct 124 VGSPVADGGLPWRYAADGSVALASPAKETRQFGDKRYVLELGITADFALVHALRGDTAGN 183
Query 183 LMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKKIE 242
L++ A NFNP A AG+ITIA+VE LV G IDPA VH PGVFV R+V K+IE
Sbjct 184 LVFDKTALNFNPLAAMAGKITIAQVEELVPAGTIDPAQVHLPGVFVQRIVETGPQNKRIE 243
Query 243 RETV 246
+ TV
Sbjct 244 KRTV 247
Lambda K H
0.318 0.136 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 352647919680
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40