BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2506 Length=215 Score E Sequences producing significant alignments: (Bits) Value gi|15842034|ref|NP_337071.1| TetR family transcriptional regulat... 424 4e-117 gi|15609643|ref|NP_217022.1| TetR family transcriptional regulat... 422 2e-116 gi|254232635|ref|ZP_04925962.1| hypothetical protein TBCG_02446 ... 421 5e-116 gi|306793987|ref|ZP_07432289.1| transcriptional regulator, tetR-... 419 1e-115 gi|289570666|ref|ZP_06450893.1| transcriptional regulator, tetR-... 395 2e-108 gi|308379223|ref|ZP_07485551.2| transcriptional regulator, tetR-... 379 2e-103 gi|308369736|ref|ZP_07418882.2| transcriptional regulator, tetR-... 376 1e-102 gi|240171588|ref|ZP_04750247.1| putative transcriptional regulat... 360 9e-98 gi|183983828|ref|YP_001852119.1| putative regulatory protein [My... 336 2e-90 gi|296170425|ref|ZP_06852013.1| TetR family transcriptional regu... 335 3e-90 gi|118619028|ref|YP_907360.1| putative regulatory protein [Mycob... 334 5e-90 gi|254823122|ref|ZP_05228123.1| hypothetical protein MintA_24550... 333 7e-90 gi|254774495|ref|ZP_05216011.1| hypothetical protein MaviaA2_074... 330 1e-88 gi|41408413|ref|NP_961249.1| hypothetical protein MAP2315 [Mycob... 327 7e-88 gi|342857894|ref|ZP_08714550.1| TetR family transcriptional regu... 311 3e-83 gi|118462743|ref|YP_880901.1| TetR family transcriptional regula... 311 6e-83 gi|333990039|ref|YP_004522653.1| regulatory protein [Mycobacteri... 295 2e-78 gi|126436214|ref|YP_001071905.1| TetR family transcriptional reg... 285 3e-75 gi|108800598|ref|YP_640795.1| TetR family transcriptional regula... 285 4e-75 gi|145223138|ref|YP_001133816.1| TetR family transcriptional reg... 273 1e-71 gi|118472914|ref|YP_888978.1| TetR family transcriptional regula... 271 6e-71 gi|120405046|ref|YP_954875.1| TetR family transcriptional regula... 268 3e-70 gi|226305318|ref|YP_002765276.1| TetR family transcriptional reg... 246 2e-63 gi|111023057|ref|YP_706029.1| TetR family transcriptional regula... 239 2e-61 gi|226365560|ref|YP_002783343.1| TetR family transcriptional reg... 237 1e-60 gi|333922017|ref|YP_004495598.1| putative TetR family transcript... 229 2e-58 gi|312140937|ref|YP_004008273.1| tetr family transcriptional reg... 226 2e-57 gi|325675425|ref|ZP_08155109.1| TetR family transcriptional regu... 226 3e-57 gi|54027010|ref|YP_121252.1| putative transcriptional regulator ... 203 2e-50 gi|309812420|ref|ZP_07706175.1| transcriptional regulator, TetR ... 197 7e-49 gi|331699875|ref|YP_004336114.1| regulatory protein TetR [Pseudo... 192 2e-47 gi|169631615|ref|YP_001705264.1| TetR family transcriptional reg... 187 1e-45 gi|88855169|ref|ZP_01129834.1| hypothetical protein A20C1_04786 ... 184 6e-45 gi|111222574|ref|YP_713368.1| TetR family transcriptional regula... 184 8e-45 gi|312199560|ref|YP_004019621.1| TetR family transcriptional reg... 181 4e-44 gi|116669945|ref|YP_830878.1| TetR family transcriptional regula... 179 3e-43 gi|320010675|gb|ADW05525.1| regulatory protein TetR [Streptomyce... 178 5e-43 gi|220912172|ref|YP_002487481.1| TetR family transcriptional reg... 174 6e-42 gi|325962777|ref|YP_004240683.1| TetR family transcriptional reg... 174 8e-42 gi|325000907|ref|ZP_08122019.1| TetR family transcriptional regu... 173 1e-41 gi|182438553|ref|YP_001826272.1| TetR family transcriptional reg... 172 2e-41 gi|163839307|ref|YP_001623712.1| TetR family transcriptional reg... 171 4e-41 gi|239987889|ref|ZP_04708553.1| TetR family transcriptional regu... 171 4e-41 gi|290960186|ref|YP_003491368.1| TetR family transcriptional reg... 171 6e-41 gi|344999846|ref|YP_004802700.1| TetR family transcriptional reg... 171 9e-41 gi|345015342|ref|YP_004817696.1| regulatory protein TetR [Strept... 170 1e-40 gi|289771485|ref|ZP_06530863.1| TetR family transcriptional regu... 170 1e-40 gi|302545218|ref|ZP_07297560.1| TetR family transcriptional regu... 170 2e-40 gi|302560532|ref|ZP_07312874.1| TetR family transcriptional regu... 169 2e-40 gi|297160331|gb|ADI10043.1| TetR family transcriptional regulato... 169 3e-40 >gi|15842034|ref|NP_337071.1| TetR family transcriptional regulator [Mycobacterium tuberculosis CDC1551] gi|13882312|gb|AAK46885.1| transcriptional regulator, TetR family [Mycobacterium tuberculosis CDC1551] Length=231 Score = 424 bits (1091), Expect = 4e-117, Method: Compositional matrix adjust. Identities = 215/215 (100%), Positives = 215/215 (100%), Gaps = 0/215 (0%) Query 1 VTASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGP 60 VTASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGP Sbjct 17 VTASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGP 76 Query 61 AIYRHFPNKESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLI 120 AIYRHFPNKESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLI Sbjct 77 AIYRHFPNKESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLI 136 Query 121 RIQDRDLAHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTP 180 RIQDRDLAHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTP Sbjct 137 RIQDRDLAHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTP 196 Query 181 HSMKAADSKPARTVRARAVLRAMTVAALSAADRCL 215 HSMKAADSKPARTVRARAVLRAMTVAALSAADRCL Sbjct 197 HSMKAADSKPARTVRARAVLRAMTVAALSAADRCL 231 >gi|15609643|ref|NP_217022.1| TetR family transcriptional regulator [Mycobacterium tuberculosis H37Rv] gi|31793686|ref|NP_856179.1| TetR family transcriptional regulator [Mycobacterium bovis AF2122/97] gi|121638388|ref|YP_978612.1| TetR family transcriptional regulator [Mycobacterium bovis BCG str. Pasteur 1173P2] 52 more sequence titles Length=215 Score = 422 bits (1085), Expect = 2e-116, Method: Compositional matrix adjust. Identities = 214/215 (99%), Positives = 215/215 (100%), Gaps = 0/215 (0%) Query 1 VTASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGP 60 +TASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGP Sbjct 1 MTASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGP 60 Query 61 AIYRHFPNKESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLI 120 AIYRHFPNKESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLI Sbjct 61 AIYRHFPNKESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLI 120 Query 121 RIQDRDLAHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTP 180 RIQDRDLAHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTP Sbjct 121 RIQDRDLAHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTP 180 Query 181 HSMKAADSKPARTVRARAVLRAMTVAALSAADRCL 215 HSMKAADSKPARTVRARAVLRAMTVAALSAADRCL Sbjct 181 HSMKAADSKPARTVRARAVLRAMTVAALSAADRCL 215 >gi|254232635|ref|ZP_04925962.1| hypothetical protein TBCG_02446 [Mycobacterium tuberculosis C] gi|124601694|gb|EAY60704.1| hypothetical protein TBCG_02446 [Mycobacterium tuberculosis C] Length=215 Score = 421 bits (1081), Expect = 5e-116, Method: Compositional matrix adjust. Identities = 213/215 (99%), Positives = 215/215 (100%), Gaps = 0/215 (0%) Query 1 VTASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGP 60 +TASAP+GRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGP Sbjct 1 MTASAPNGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGP 60 Query 61 AIYRHFPNKESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLI 120 AIYRHFPNKESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLI Sbjct 61 AIYRHFPNKESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLI 120 Query 121 RIQDRDLAHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTP 180 RIQDRDLAHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTP Sbjct 121 RIQDRDLAHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTP 180 Query 181 HSMKAADSKPARTVRARAVLRAMTVAALSAADRCL 215 HSMKAADSKPARTVRARAVLRAMTVAALSAADRCL Sbjct 181 HSMKAADSKPARTVRARAVLRAMTVAALSAADRCL 215 >gi|306793987|ref|ZP_07432289.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu005] gi|308337677|gb|EFP26528.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu005] Length=215 Score = 419 bits (1077), Expect = 1e-115, Method: Compositional matrix adjust. Identities = 213/215 (99%), Positives = 214/215 (99%), Gaps = 0/215 (0%) Query 1 VTASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGP 60 +TASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGP Sbjct 1 MTASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGP 60 Query 61 AIYRHFPNKESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLI 120 AIYRHFPNKESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLI Sbjct 61 AIYRHFPNKESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLI 120 Query 121 RIQDRDLAHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTP 180 RIQDRDLAHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTP Sbjct 121 RIQDRDLAHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTP 180 Query 181 HSMKAADSKPARTVRARAVLRAMTVAALSAADRCL 215 H MKAADSKPARTVRARAVLRAMTVAALSAADRCL Sbjct 181 HRMKAADSKPARTVRARAVLRAMTVAALSAADRCL 215 >gi|289570666|ref|ZP_06450893.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis T17] gi|289544420|gb|EFD48068.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis T17] Length=201 Score = 395 bits (1015), Expect = 2e-108, Method: Compositional matrix adjust. Identities = 200/201 (99%), Positives = 201/201 (100%), Gaps = 0/201 (0%) Query 1 VTASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGP 60 +TASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGP Sbjct 1 MTASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGP 60 Query 61 AIYRHFPNKESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLI 120 AIYRHFPNKESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLI Sbjct 61 AIYRHFPNKESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLI 120 Query 121 RIQDRDLAHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTP 180 RIQDRDLAHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTP Sbjct 121 RIQDRDLAHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTP 180 Query 181 HSMKAADSKPARTVRARAVLR 201 HSMKAADSKPARTVRARAVLR Sbjct 181 HSMKAADSKPARTVRARAVLR 201 >gi|308379223|ref|ZP_07485551.2| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu010] gi|308380386|ref|ZP_07489773.2| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu011] gi|308357717|gb|EFP46568.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu010] gi|308361657|gb|EFP50508.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu011] Length=194 Score = 379 bits (973), Expect = 2e-103, Method: Compositional matrix adjust. Identities = 193/194 (99%), Positives = 194/194 (100%), Gaps = 0/194 (0%) Query 22 LKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVS 81 +KSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVS Sbjct 1 MKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVS 60 Query 82 ARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAERQVRKA 141 ARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAERQVRKA Sbjct 61 ARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAERQVRKA 120 Query 142 QRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPARTVRARAVLR 201 QRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPARTVRARAVLR Sbjct 121 QRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPARTVRARAVLR 180 Query 202 AMTVAALSAADRCL 215 AMTVAALSAADRCL Sbjct 181 AMTVAALSAADRCL 194 >gi|308369736|ref|ZP_07418882.2| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu002] gi|308371035|ref|ZP_07423628.2| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu003] gi|308372251|ref|ZP_07427982.2| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu004] 11 more sequence titles Length=194 Score = 376 bits (966), Expect = 1e-102, Method: Compositional matrix adjust. Identities = 192/194 (99%), Positives = 193/194 (99%), Gaps = 0/194 (0%) Query 22 LKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVS 81 +KSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVS Sbjct 1 MKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVS 60 Query 82 ARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAERQVRKA 141 ARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAERQVRKA Sbjct 61 ARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAERQVRKA 120 Query 142 QRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPARTVRARAVLR 201 QRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPH MKAADSKPARTVRARAVLR Sbjct 121 QRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHRMKAADSKPARTVRARAVLR 180 Query 202 AMTVAALSAADRCL 215 AMTVAALSAADRCL Sbjct 181 AMTVAALSAADRCL 194 >gi|240171588|ref|ZP_04750247.1| putative transcriptional regulatory protein [Mycobacterium kansasii ATCC 12478] Length=213 Score = 360 bits (923), Expect = 9e-98, Method: Compositional matrix adjust. Identities = 178/212 (84%), Positives = 196/212 (93%), Gaps = 0/212 (0%) Query 1 VTASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGP 60 +TASAPDGRP QPEA++RRSQLKSDRR QLL+AAERLFAERGFLAVRLEDIGA AG+SGP Sbjct 1 MTASAPDGRPAQPEASSRRSQLKSDRRLQLLSAAERLFAERGFLAVRLEDIGAVAGISGP 60 Query 61 AIYRHFPNKESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLI 120 AIYRHFPNKESLLVELLVG+S+RLLAGARDVT R ++ AAALDGLI+FHLDFALGE DLI Sbjct 61 AIYRHFPNKESLLVELLVGISSRLLAGARDVTARGSDPAAALDGLIDFHLDFALGEPDLI 120 Query 121 RIQDRDLAHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTP 180 RIQDRDLAHLPA AERQVRKAQRQYVEVWVGVLRE +P LAEADARLMAHAVFGLLNSTP Sbjct 121 RIQDRDLAHLPAAAERQVRKAQRQYVEVWVGVLRERDPDLAEADARLMAHAVFGLLNSTP 180 Query 181 HSMKAADSKPARTVRARAVLRAMTVAALSAAD 212 HSMK+AD++ AR +R+R ++RAMTVAAL D Sbjct 181 HSMKSADARSARVLRSRTIMRAMTVAALRVTD 212 >gi|183983828|ref|YP_001852119.1| putative regulatory protein [Mycobacterium marinum M] gi|183177154|gb|ACC42264.1| conserved hypothetical regulatory protein [Mycobacterium marinum M] Length=211 Score = 336 bits (861), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 170/209 (82%), Positives = 186/209 (89%), Gaps = 3/209 (1%) Query 1 VTASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGP 60 + ASAPD + P NRRSQ KSDRR QLL+AAERLFAERGFLAVRLEDIGAAAG+SGP Sbjct 1 MAASAPDEQTATP---NRRSQQKSDRRLQLLSAAERLFAERGFLAVRLEDIGAAAGISGP 57 Query 61 AIYRHFPNKESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLI 120 AIYRHFPNKESLLVELLVG+S+RLLAGAR VTT S + AAALDGLI+FHLDFALGE DLI Sbjct 58 AIYRHFPNKESLLVELLVGISSRLLAGARQVTTNSNDAAAALDGLIDFHLDFALGEPDLI 117 Query 121 RIQDRDLAHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTP 180 RIQDRDL HLPA AERQVRKAQRQYVE+WVGVLR+L+PGLAEADARLMAHA FGLLNSTP Sbjct 118 RIQDRDLGHLPAAAERQVRKAQRQYVEIWVGVLRQLDPGLAEADARLMAHAAFGLLNSTP 177 Query 181 HSMKAADSKPARTVRARAVLRAMTVAALS 209 HSMK+AD+K A +RAV+RAMTVAAL+ Sbjct 178 HSMKSADTKSACAPHSRAVMRAMTVAALT 206 >gi|296170425|ref|ZP_06852013.1| TetR family transcriptional regulator [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894896|gb|EFG74617.1| TetR family transcriptional regulator [Mycobacterium parascrofulaceum ATCC BAA-614] Length=219 Score = 335 bits (859), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 177/218 (82%), Positives = 190/218 (88%), Gaps = 4/218 (1%) Query 1 VTASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGP 60 +T S DGRPG + NRRSQLKSDRR QLL+AAERLFAERGFLAVRLEDIGAAAGVSGP Sbjct 1 MTTSTSDGRPGPADTPNRRSQLKSDRRLQLLSAAERLFAERGFLAVRLEDIGAAAGVSGP 60 Query 61 AIYRHFPNKESLLVELLVGVSARLLAGARDV-TTRSANLAAALDGLIEFHLDFALGEADL 119 AIYRHFPNKESLLVELLVG+SARLLAGARDV S + AAALDGLI+FHLDFALGE DL Sbjct 61 AIYRHFPNKESLLVELLVGISARLLAGARDVRAHSSDDAAAALDGLIDFHLDFALGEPDL 120 Query 120 IRIQDRDLAHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNST 179 IRIQDRDLAHLP AE+QVRKAQRQYVEVWVGVLRELNP LAEADARL AHAVFGLLNST Sbjct 121 IRIQDRDLAHLPEAAEKQVRKAQRQYVEVWVGVLRELNPDLAEADARLTAHAVFGLLNST 180 Query 180 PHSMKAAD---SKPARTVRARAVLRAMTVAALSAADRC 214 P+SMK+ D SK AR R+RAV+RAMTVAAL+A + C Sbjct 181 PYSMKSPDTSRSKSARAARSRAVMRAMTVAALAAGNEC 218 >gi|118619028|ref|YP_907360.1| putative regulatory protein [Mycobacterium ulcerans Agy99] gi|118571138|gb|ABL05889.1| conserved hypothetical regulatory protein [Mycobacterium ulcerans Agy99] Length=211 Score = 334 bits (857), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 169/209 (81%), Positives = 186/209 (89%), Gaps = 3/209 (1%) Query 1 VTASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGP 60 + ASAPD + P NRRSQ KSDRR QLL+AAERLFAERGFLAVRLEDIGAAAG+SGP Sbjct 1 MAASAPDEQTATP---NRRSQQKSDRRLQLLSAAERLFAERGFLAVRLEDIGAAAGISGP 57 Query 61 AIYRHFPNKESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLI 120 AIYRHFPNKESLLVELLVG+S+RLLAGAR VTT S + AAALDGLI+FHLDFALGE DLI Sbjct 58 AIYRHFPNKESLLVELLVGISSRLLAGARQVTTNSNDAAAALDGLIDFHLDFALGEPDLI 117 Query 121 RIQDRDLAHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTP 180 RIQDRDL HLPA AERQVRKAQRQYVE+WVGVLR+L+PGLAEADARLMAHA FGLLNSTP Sbjct 118 RIQDRDLGHLPAAAERQVRKAQRQYVEIWVGVLRQLDPGLAEADARLMAHAAFGLLNSTP 177 Query 181 HSMKAADSKPARTVRARAVLRAMTVAALS 209 HSM++AD+K A +RAV+RAMTVAAL+ Sbjct 178 HSMESADTKSACAPHSRAVMRAMTVAALT 206 >gi|254823122|ref|ZP_05228123.1| hypothetical protein MintA_24550 [Mycobacterium intracellulare ATCC 13950] Length=218 Score = 333 bits (855), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 170/217 (79%), Positives = 186/217 (86%), Gaps = 3/217 (1%) Query 1 VTASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGP 60 +T S DG EA NRRSQLKSDRR QLL+AAERLFAERGFLAVRLEDIGAAAGVSGP Sbjct 1 MTTSTSDGHAAGAEAPNRRSQLKSDRRLQLLSAAERLFAERGFLAVRLEDIGAAAGVSGP 60 Query 61 AIYRHFPNKESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLI 120 AIYRHFPNKESLLVELLVG+S RLLAGAR V R+++ +AALDGLI+FHLDFAL E DLI Sbjct 61 AIYRHFPNKESLLVELLVGISTRLLAGARQVRARNSDASAALDGLIDFHLDFALTEPDLI 120 Query 121 RIQDRDLAHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTP 180 RIQDRDLA+LP AE+QVRKAQRQYVEVWVGVLRELNP LAE DARL AHAVFGLLNSTP Sbjct 121 RIQDRDLAYLPGAAEKQVRKAQRQYVEVWVGVLRELNPELAETDARLTAHAVFGLLNSTP 180 Query 181 HSMKAAD---SKPARTVRARAVLRAMTVAALSAADRC 214 HSMK+ D SK AR R+RAV+RAMT+AAL A ++C Sbjct 181 HSMKSPDTSRSKGARAARSRAVMRAMTIAALEAGNQC 217 >gi|254774495|ref|ZP_05216011.1| hypothetical protein MaviaA2_07468 [Mycobacterium avium subsp. avium ATCC 25291] gi|336460989|gb|EGO39869.1| transcriptional regulator [Mycobacterium avium subsp. paratuberculosis S397] Length=218 Score = 330 bits (845), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 174/217 (81%), Positives = 190/217 (88%), Gaps = 3/217 (1%) Query 1 VTASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGP 60 +T SA + R G + NRRSQLKSDRR QLL+AAERLFAERGFLAVRLEDIGA+AGVSGP Sbjct 1 MTTSASESRAGGAQPPNRRSQLKSDRRLQLLSAAERLFAERGFLAVRLEDIGASAGVSGP 60 Query 61 AIYRHFPNKESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLI 120 AIYRHFPNKESLLVELLVG+S RLLAGAR V RSA+ AAALDGLI+FHLDFAL E DLI Sbjct 61 AIYRHFPNKESLLVELLVGISTRLLAGARQVRARSADAAAALDGLIDFHLDFALNEPDLI 120 Query 121 RIQDRDLAHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTP 180 RIQDRDLA+LP AERQVRKAQRQYVEVWVGVLRELNP LAEADARL AHAVFGLLNSTP Sbjct 121 RIQDRDLAYLPKPAERQVRKAQRQYVEVWVGVLRELNPELAEADARLTAHAVFGLLNSTP 180 Query 181 HSMKAADS---KPARTVRARAVLRAMTVAALSAADRC 214 HSMK+ DS KPAR R+RA++RAMTVAAL+A ++C Sbjct 181 HSMKSQDSGRGKPARAARSRAIMRAMTVAALAAGNQC 217 >gi|41408413|ref|NP_961249.1| hypothetical protein MAP2315 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396769|gb|AAS04632.1| hypothetical protein MAP_2315 [Mycobacterium avium subsp. paratuberculosis K-10] Length=218 Score = 327 bits (838), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 173/217 (80%), Positives = 189/217 (88%), Gaps = 3/217 (1%) Query 1 VTASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGP 60 +T SA + R G + NRRSQLKSDRR QLL+AAERLFAERGFLAVRLEDIGA+AGVSGP Sbjct 1 MTTSASESRAGGAQPPNRRSQLKSDRRLQLLSAAERLFAERGFLAVRLEDIGASAGVSGP 60 Query 61 AIYRHFPNKESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLI 120 AIYRHFPNKESLLVELLVG+S RLLAGAR V RSA+ AAALDGLI+FHLDFAL E DLI Sbjct 61 AIYRHFPNKESLLVELLVGISTRLLAGARQVRARSADAAAALDGLIDFHLDFALNEPDLI 120 Query 121 RIQDRDLAHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTP 180 RIQDRDLA+LP AERQVRKAQRQYVEVWVGVLRELNP LAEADARL AHAVFGLLNSTP Sbjct 121 RIQDRDLAYLPKPAERQVRKAQRQYVEVWVGVLRELNPELAEADARLTAHAVFGLLNSTP 180 Query 181 HSMKAADS---KPARTVRARAVLRAMTVAALSAADRC 214 HSMK+ S KPAR R+RA++RAMTVAAL+A ++C Sbjct 181 HSMKSQGSGRGKPARAARSRAIMRAMTVAALAAGNQC 217 >gi|342857894|ref|ZP_08714550.1| TetR family transcriptional regulator [Mycobacterium colombiense CECT 3035] gi|342135227|gb|EGT88393.1| TetR family transcriptional regulator [Mycobacterium colombiense CECT 3035] Length=197 Score = 311 bits (798), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 158/196 (81%), Positives = 174/196 (89%), Gaps = 3/196 (1%) Query 22 LKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVS 81 +KSDRR QLL+AAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVG+S Sbjct 1 MKSDRRLQLLSAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGIS 60 Query 82 ARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAERQVRKA 141 RLLAGAR V S + AAALDGLI+FHLDF E DLIRIQDRDLA+LPA AE+QVRK+ Sbjct 61 TRLLAGARQVQAGSRDAAAALDGLIDFHLDFVFNEPDLIRIQDRDLAYLPAAAEKQVRKS 120 Query 142 QRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPARTVRA---RA 198 QRQYVEVWVGVLRELNP LAEADARL AHAVFGLLNSTPHSMK+ D+ ++TVRA RA Sbjct 121 QRQYVEVWVGVLRELNPELAEADARLAAHAVFGLLNSTPHSMKSPDTSRSKTVRAARSRA 180 Query 199 VLRAMTVAALSAADRC 214 V+RAMTVAAL+A ++C Sbjct 181 VMRAMTVAALAAGNQC 196 >gi|118462743|ref|YP_880901.1| TetR family transcriptional regulator [Mycobacterium avium 104] gi|118164030|gb|ABK64927.1| transcriptional regulator, TetR family protein [Mycobacterium avium 104] Length=197 Score = 311 bits (796), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 163/196 (84%), Positives = 177/196 (91%), Gaps = 3/196 (1%) Query 22 LKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVS 81 +KSDRR QLL+AAERLFAERGFLAVRLEDIGA+AGVSGPAIYRHFPNKESLLVELLVG+S Sbjct 1 MKSDRRLQLLSAAERLFAERGFLAVRLEDIGASAGVSGPAIYRHFPNKESLLVELLVGIS 60 Query 82 ARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAERQVRKA 141 RLLAGAR V RSA+ AAALDGLI+FHLDFAL E DLIRIQDRDLA+LP AERQVRKA Sbjct 61 TRLLAGARQVRARSADAAAALDGLIDFHLDFALNEPDLIRIQDRDLAYLPKPAERQVRKA 120 Query 142 QRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADS---KPARTVRARA 198 QRQYVEVWVGVLRELNP LAEADARL AHAVFGLLNSTPHSMK+ DS KPAR R+RA Sbjct 121 QRQYVEVWVGVLRELNPELAEADARLTAHAVFGLLNSTPHSMKSQDSGRGKPARAARSRA 180 Query 199 VLRAMTVAALSAADRC 214 ++RAMTVAAL+A ++C Sbjct 181 IMRAMTVAALAAGNQC 196 >gi|333990039|ref|YP_004522653.1| regulatory protein [Mycobacterium sp. JDM601] gi|333486007|gb|AEF35399.1| putative regulatory protein [Mycobacterium sp. JDM601] Length=216 Score = 295 bits (756), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 156/198 (79%), Positives = 170/198 (86%), Gaps = 0/198 (0%) Query 14 EATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLL 73 E NRRS+LKSDRR QLL AAERLFA+RGFLAVRLEDIGAAAGVSGPAIYRHF NKE+LL Sbjct 14 EPANRRSRLKSDRRSQLLTAAERLFAQRGFLAVRLEDIGAAAGVSGPAIYRHFANKEALL 73 Query 74 VELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAV 133 VELLVG+S RLLAGAR V + + A LDGLIEFHLDFALGE DLIRIQDRDLAHLPA Sbjct 74 VELLVGISTRLLAGARAVESGGRSPDAVLDGLIEFHLDFALGEPDLIRIQDRDLAHLPAG 133 Query 134 AERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPART 193 A+RQVR AQRQYVEVWVGVL + GLAEADARLMAHAVFGLLNSTP+S+K A +K A Sbjct 134 AQRQVRSAQRQYVEVWVGVLCARHAGLAEADARLMAHAVFGLLNSTPYSVKPAGAKSAAP 193 Query 194 VRARAVLRAMTVAALSAA 211 R+RAVLRAMT++AL AA Sbjct 194 ERSRAVLRAMTISALGAA 211 >gi|126436214|ref|YP_001071905.1| TetR family transcriptional regulator [Mycobacterium sp. JLS] gi|126236014|gb|ABN99414.1| transcriptional regulator, TetR family [Mycobacterium sp. JLS] Length=207 Score = 285 bits (730), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 145/200 (73%), Positives = 168/200 (84%), Gaps = 1/200 (0%) Query 15 ATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLV 74 A+ RRS+ KSDRR QL+AAAERL AE+G+LAVRLEDIG+A GVSGPAIYRHFPNKE++LV Sbjct 7 ASTRRSRAKSDRRSQLIAAAERLVAEKGYLAVRLEDIGSAVGVSGPAIYRHFPNKEAMLV 66 Query 75 ELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVA 134 ELLVG+S RLLAGAR+V T S + ALDGLI+FHLDFALGE+DLIRIQDRDL HLP A Sbjct 67 ELLVGISTRLLAGAREVLTDSPDAETALDGLIDFHLDFALGESDLIRIQDRDLGHLPDPA 126 Query 135 ERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPARTV 194 +RQVR+AQRQYVE+WV VLR ++P L EA ARLMAHA FGLLNSTPHS+K +K A Sbjct 127 KRQVRRAQRQYVEIWVEVLRAVDPSLDEAQARLMAHAAFGLLNSTPHSVKPGATKTAEA- 185 Query 195 RARAVLRAMTVAALSAADRC 214 +R VLRAMTVAAL++A R Sbjct 186 SSRTVLRAMTVAALASAGRL 205 >gi|108800598|ref|YP_640795.1| TetR family transcriptional regulator [Mycobacterium sp. MCS] gi|119869737|ref|YP_939689.1| TetR family transcriptional regulator [Mycobacterium sp. KMS] gi|108771017|gb|ABG09739.1| transcriptional regulator, TetR family [Mycobacterium sp. MCS] gi|119695826|gb|ABL92899.1| transcriptional regulator, TetR family [Mycobacterium sp. KMS] Length=207 Score = 285 bits (728), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 145/200 (73%), Positives = 167/200 (84%), Gaps = 1/200 (0%) Query 15 ATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLV 74 A+ RRS+ KSDRR QL+AAAERL AE+G+LAVRLEDIG+A GVSGPAIYRHFPNKE++LV Sbjct 7 ASTRRSRAKSDRRSQLIAAAERLVAEKGYLAVRLEDIGSAVGVSGPAIYRHFPNKEAMLV 66 Query 75 ELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVA 134 ELLVG+S RLLAGAR+V T S + ALDGLI+FHLDFALGE+DLIRIQDRDL HLP A Sbjct 67 ELLVGISTRLLAGAREVLTDSPDAETALDGLIDFHLDFALGESDLIRIQDRDLGHLPDPA 126 Query 135 ERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPARTV 194 +RQVR+AQRQYVE+WV VLR ++P L EA ARLMAHA FGLLNSTPHS+K SK A Sbjct 127 KRQVRRAQRQYVEIWVEVLRAVDPSLDEAQARLMAHAAFGLLNSTPHSVKPGASKTAEA- 185 Query 195 RARAVLRAMTVAALSAADRC 214 +R LRAMTVAAL++A R Sbjct 186 SSRTALRAMTVAALASAGRL 205 >gi|145223138|ref|YP_001133816.1| TetR family transcriptional regulator [Mycobacterium gilvum PYR-GCK] gi|315443595|ref|YP_004076474.1| TetR family transcriptional regulator [Mycobacterium sp. Spyr1] gi|145215624|gb|ABP45028.1| transcriptional regulator, TetR family [Mycobacterium gilvum PYR-GCK] gi|315261898|gb|ADT98639.1| transcriptional regulator, TetR family [Mycobacterium sp. Spyr1] Length=206 Score = 273 bits (698), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 138/200 (69%), Positives = 163/200 (82%), Gaps = 1/200 (0%) Query 14 EATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLL 73 E ++ RS+ KSDRR QL+AAAERLFAE G+LAVRLEDIG+AAG+SGPA+YRHFPNKE+LL Sbjct 5 EISSPRSRAKSDRRDQLVAAAERLFAEHGYLAVRLEDIGSAAGISGPAVYRHFPNKEALL 64 Query 74 VELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAV 133 VELLVG+S RLLAGA DV + A+ L+ LI+FHLDFAL E+DLIRIQDRDL +LP Sbjct 65 VELLVGISTRLLAGATDVVGADDDAASTLENLIDFHLDFALDESDLIRIQDRDLGNLPPA 124 Query 134 AERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPART 193 A+RQVR+ QRQYVE+WV VLR PGL+EADARLMAH FGLLNST HSMK +K A Sbjct 125 AKRQVRRKQRQYVEIWVDVLRRCTPGLSEADARLMAHGTFGLLNSTAHSMKPGTTKTAE- 183 Query 194 VRARAVLRAMTVAALSAADR 213 +R VLR MTVAAL++A+R Sbjct 184 AGSRTVLREMTVAALTSAER 203 >gi|118472914|ref|YP_888978.1| TetR family transcriptional regulator [Mycobacterium smegmatis str. MC2 155] gi|118174201|gb|ABK75097.1| transcriptional regulator, TetR family protein [Mycobacterium smegmatis str. MC2 155] Length=201 Score = 271 bits (692), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 138/197 (71%), Positives = 160/197 (82%), Gaps = 1/197 (0%) Query 15 ATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLV 74 + RRSQ KSDRR QL+AAAERL AERG+LAVRLEDIGAA GVSGPAIYRHFPNKE++LV Sbjct 3 SVTRRSQAKSDRRSQLIAAAERLVAERGYLAVRLEDIGAAVGVSGPAIYRHFPNKEAMLV 62 Query 75 ELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVA 134 ELLVG+S RLL GAR+V + A ALD L++FHLDFA E+DLIRIQDRDLAHLP A Sbjct 63 ELLVGISTRLLDGAREVVETHDDPAKALDALVDFHLDFAFDESDLIRIQDRDLAHLPDTA 122 Query 135 ERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSK-PART 193 +RQVR+AQRQYVE+WV VL L L E +AR+MAHA FGLLNSTPHS+K A +K + T Sbjct 123 KRQVRRAQRQYVEIWVSVLTRLRRDLPEEEARVMAHATFGLLNSTPHSVKPAVTKAQSST 182 Query 194 VRARAVLRAMTVAALSA 210 ++R VLR MTVAAL+A Sbjct 183 AQSRGVLRRMTVAALTA 199 >gi|120405046|ref|YP_954875.1| TetR family transcriptional regulator [Mycobacterium vanbaalenii PYR-1] gi|119957864|gb|ABM14869.1| transcriptional regulator, TetR family [Mycobacterium vanbaalenii PYR-1] Length=206 Score = 268 bits (686), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 139/201 (70%), Positives = 162/201 (81%), Gaps = 2/201 (0%) Query 14 EATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLL 73 +AT+ RS+ KSDRR QL+ AAERL AE G+LAVRLEDIGAAAG+SGPAIYRHFPNKE+LL Sbjct 5 DATSPRSRAKSDRRGQLIGAAERLIAEHGYLAVRLEDIGAAAGISGPAIYRHFPNKEALL 64 Query 74 VELLVGVSARLLAGARDVTTRSANLA-AALDGLIEFHLDFALGEADLIRIQDRDLAHLPA 132 VELLVG+S RLLAGA +V R+ + A +AL+GLI+FHLDF GE DLIRIQDRDL +LP Sbjct 65 VELLVGISTRLLAGAVEVVDRAGDDADSALEGLIDFHLDFVFGEPDLIRIQDRDLGNLPP 124 Query 133 VAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPAR 192 A+RQVR+ QRQYVE+WV VLR PGL E DARLMAHA FGLLNSTPH +K +K A Sbjct 125 AAKRQVRRKQRQYVEIWVDVLRRRTPGLTETDARLMAHAAFGLLNSTPHGVKPGLNKAAE 184 Query 193 TVRARAVLRAMTVAALSAADR 213 +R VLR MTVAAL++A R Sbjct 185 -ASSRTVLRTMTVAALTSAGR 204 >gi|226305318|ref|YP_002765276.1| TetR family transcriptional regulator [Rhodococcus erythropolis PR4] gi|229490636|ref|ZP_04384474.1| transcriptional regulator, TetR family [Rhodococcus erythropolis SK121] gi|226184433|dbj|BAH32537.1| putative TetR family transcriptional regulator [Rhodococcus erythropolis PR4] gi|229322456|gb|EEN88239.1| transcriptional regulator, TetR family [Rhodococcus erythropolis SK121] Length=199 Score = 246 bits (627), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 128/197 (65%), Positives = 152/197 (78%), Gaps = 5/197 (2%) Query 12 QPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKES 71 Q A RR Q+K+DRR QLL AA RL AERGF++VRLED+GAA G+SGPA+YRHFPNK++ Sbjct 5 QVAAPTRRDQMKADRRRQLLDAAARLIAERGFVSVRLEDLGAAVGISGPAVYRHFPNKDA 64 Query 72 LLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLP 131 +LVELLVG+S RL G + + +AALD L+EFHLDFALGE DLIRIQDRDL LP Sbjct 65 VLVELLVGISTRLHEGGSAAAEAADSPSAALDALVEFHLDFALGEPDLIRIQDRDLESLP 124 Query 132 AVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPA 191 A A RQVR+ QR+YVEVWVGVL +L+P L +ADAR+ AHA FGL+NSTPHS + PA Sbjct 125 ADARRQVRQTQRKYVEVWVGVLEQLDPQLDQADARIKAHATFGLINSTPHS-----ANPA 179 Query 192 RTVRARAVLRAMTVAAL 208 RAR VLR MT+AAL Sbjct 180 SPARARRVLRDMTLAAL 196 >gi|111023057|ref|YP_706029.1| TetR family transcriptional regulator [Rhodococcus jostii RHA1] gi|110822587|gb|ABG97871.1| possible transcriptional regulator, TetR family protein [Rhodococcus jostii RHA1] Length=212 Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 124/198 (63%), Positives = 149/198 (76%), Gaps = 5/198 (2%) Query 11 GQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKE 70 G RR Q+K+DRR QLL AA RL AERGFL VRLED+G+AAG+SGPA+YRHFPNK+ Sbjct 18 GTEAPITRREQMKADRRRQLLDAAARLIAERGFLGVRLEDLGSAAGISGPAVYRHFPNKD 77 Query 71 SLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHL 130 ++LVELLVG+S RLL G V +A+ AAL+GLI+FHLDFALGE DLIRIQDRDL L Sbjct 78 AVLVELLVGISTRLLEGGSLVVAEAASPEAALEGLIDFHLDFALGEPDLIRIQDRDLESL 137 Query 131 PAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKP 190 PA A R+VR+ QR+YVE+WV VL +++ L E DAR AHA FGL+NSTPHS A + P Sbjct 138 PAEARREVRQTQRRYVEIWVKVLLQVDTSLDETDARTKAHATFGLINSTPHS--ADPTTP 195 Query 191 ARTVRARAVLRAMTVAAL 208 +RT R VLR MT+ L Sbjct 196 SRT---RKVLRDMTLLCL 210 >gi|226365560|ref|YP_002783343.1| TetR family transcriptional regulator [Rhodococcus opacus B4] gi|226244050|dbj|BAH54398.1| putative TetR family transcriptional regulator [Rhodococcus opacus B4] Length=213 Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 122/202 (61%), Positives = 146/202 (73%), Gaps = 10/202 (4%) Query 7 DGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHF 66 DG P RR Q+K+DRR QLL AA RL AERGFL VRLED+G+AAG+SGPA+YRHF Sbjct 16 DGAP-----ITRREQMKADRRRQLLDAAARLIAERGFLGVRLEDLGSAAGISGPAVYRHF 70 Query 67 PNKESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRD 126 PNK+++LVELLVG+S RL G V + + AAL+GLI+FHLDFALGE DLIRIQDRD Sbjct 71 PNKDAVLVELLVGISTRLFEGGSLVAAEATSPDAALEGLIDFHLDFALGEPDLIRIQDRD 130 Query 127 LAHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAA 186 L LP A R+VR+ QR+YVE+WV VL +++ L E DAR AHA FGL+NSTPHS Sbjct 131 LESLPVDARREVRQTQRRYVEIWVKVLLQVDSSLDETDARTKAHATFGLINSTPHS---- 186 Query 187 DSKPARTVRARAVLRAMTVAAL 208 + PA R R VLR MT + L Sbjct 187 -ADPATPSRTRKVLRDMTFSCL 207 >gi|333922017|ref|YP_004495598.1| putative TetR family transcriptional regulator [Amycolicicoccus subflavus DQS3-9A1] gi|333484238|gb|AEF42798.1| Putative TetR family transcriptional regulator [Amycolicicoccus subflavus DQS3-9A1] Length=200 Score = 229 bits (584), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 122/199 (62%), Positives = 145/199 (73%), Gaps = 6/199 (3%) Query 12 QPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKES 71 Q A RRSQ+K+DRR QLL+AA +L AERG+ VRLEDIGA G+SGPAIYRHFPNKE+ Sbjct 8 QDAAPTRRSQMKADRRKQLLSAAAKLIAERGYNGVRLEDIGAEVGISGPAIYRHFPNKEA 67 Query 72 LLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLP 131 LLVELL GVS LL G +V +++ AAL GLIEFHLDFA+ ++DLIR+QDRDL LP Sbjct 68 LLVELLTGVSDHLLYGGTEVADNASDAEAALAGLIEFHLDFAINQSDLIRVQDRDLHSLP 127 Query 132 AVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPA 191 A+ QVR QR+YVE WV VL +LNP L AR AHAVFGL+NSTPHS +A PA Sbjct 128 REAQHQVRMMQRRYVERWVQVLMDLNPDLDAVSARTKAHAVFGLINSTPHSARA----PA 183 Query 192 RTVRARAVLRAMTVAALSA 210 R R +LR M AAL++ Sbjct 184 --ARTRELLRNMAKAALAS 200 >gi|312140937|ref|YP_004008273.1| tetr family transcriptional regulator [Rhodococcus equi 103S] gi|311890276|emb|CBH49594.1| putative TetR family transcriptional regulator [Rhodococcus equi 103S] Length=209 Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 117/197 (60%), Positives = 146/197 (75%), Gaps = 0/197 (0%) Query 17 NRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVEL 76 RRS+ K+DRR +LL AA RL AERGF VRLED+G+A G+SGPA+YRHFPNK++LLVEL Sbjct 13 GRRSRAKADRRRELLRAAARLIAERGFPGVRLEDLGSAVGISGPAVYRHFPNKDALLVEL 72 Query 77 LVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAER 136 L +S RLLAG DV R + AL L++FHLDFALGE DLIR+QDRDL LP A Sbjct 73 LTDISERLLAGGTDVVERVPDPHRALAELVDFHLDFALGEPDLIRVQDRDLHSLPDDARH 132 Query 137 QVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPARTVRA 196 +VR+ QR+YVE+WVGVLR+++PGL AR+ AHA FGL+NSTP+S + + A Sbjct 133 RVRQTQRRYVELWVGVLRKMDPGLDSTQARIAAHAAFGLINSTPYSAVSPTADAADGDLT 192 Query 197 RAVLRAMTVAALSAADR 213 R+VLR MT+AAL+A R Sbjct 193 RSVLRRMTLAALAAETR 209 >gi|325675425|ref|ZP_08155109.1| TetR family transcriptional regulator [Rhodococcus equi ATCC 33707] gi|325553396|gb|EGD23074.1| TetR family transcriptional regulator [Rhodococcus equi ATCC 33707] Length=209 Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 116/197 (59%), Positives = 146/197 (75%), Gaps = 0/197 (0%) Query 17 NRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVEL 76 RRS+ K+DRR +LL AA RL AERGF VRLED+G+A G+SGPA+YRHFPNK++LLVEL Sbjct 13 GRRSRAKADRRRELLRAAARLIAERGFPGVRLEDLGSAVGISGPAVYRHFPNKDALLVEL 72 Query 77 LVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAER 136 L +S RLLAG DV R + AL L++FHLDFALGE DLIR+QDRDL LP A Sbjct 73 LTDISERLLAGGTDVVERVPDPHRALAELVDFHLDFALGEPDLIRVQDRDLHSLPDEARH 132 Query 137 QVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPARTVRA 196 +VR+ QR+YVE+WVGVLR+++PGL AR+ AHA FGL+NSTP+S + + A Sbjct 133 RVRQTQRRYVELWVGVLRKMDPGLDSTQARIAAHAAFGLINSTPYSAVSPTADAADGDLT 192 Query 197 RAVLRAMTVAALSAADR 213 R+VLR MT+AA++A R Sbjct 193 RSVLRRMTLAAIAAETR 209 >gi|54027010|ref|YP_121252.1| putative transcriptional regulator [Nocardia farcinica IFM 10152] gi|54018518|dbj|BAD59888.1| putative transcriptional regulator [Nocardia farcinica IFM 10152] Length=209 Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 114/194 (59%), Positives = 145/194 (75%), Gaps = 7/194 (3%) Query 17 NRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVEL 76 RR QLK++RR +LL A RL A+RGFL VRL+D+GAA G+SGPA+YRHFP+KE+LLVEL Sbjct 17 TRREQLKAERRRRLLEAGARLIADRGFLGVRLDDLGAAVGISGPAVYRHFPSKEALLVEL 76 Query 77 LVGVSARLLAGARDVTTR--SANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVA 134 LVGVS RLL G R V + + + GL++FHLDFALGE +LIRIQDRDL +P A Sbjct 77 LVGVSERLLDGGRAVLADHDGGDPRSVIAGLVDFHLDFALGEPELIRIQDRDLDQMPDDA 136 Query 135 ERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPARTV 194 R+VR+ QRQYVE+WV L+ ++P L+E +AR+ AHAVFGL+NSTPHS A+D++ Sbjct 137 RRRVRRTQRQYVELWVDALQRVHPQLSEGEARVRAHAVFGLMNSTPHSATASDAE----- 191 Query 195 RARAVLRAMTVAAL 208 R R LR M +AAL Sbjct 192 RVRPALREMALAAL 205 >gi|309812420|ref|ZP_07706175.1| transcriptional regulator, TetR family [Dermacoccus sp. Ellin185] gi|308433725|gb|EFP57602.1| transcriptional regulator, TetR family [Dermacoccus sp. Ellin185] Length=208 Score = 197 bits (502), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 105/191 (55%), Positives = 135/191 (71%), Gaps = 1/191 (0%) Query 19 RSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLV 78 R + K+ RR Q+L AA L AERG VRLED+G+A G+SGPA+YRHF NKE++L ELLV Sbjct 14 RERSKAARRQQILDAAAGLIAERGLAGVRLEDLGSAVGISGPAVYRHFANKEAVLAELLV 73 Query 79 GVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAERQV 138 G+S LL V +A AL+ L++FH+DF+L + LIR+Q RDLA L A A R V Sbjct 74 GISRYLLENGSRVVADAATADEALENLVDFHIDFSLTKPALIRVQGRDLASLDAAARRDV 133 Query 139 RKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSM-KAADSKPARTVRAR 197 R+ QRQYVE+WVGVLR+++P L++ +AR+ AHA FG LNSTPHS + + A R R Sbjct 134 RQLQRQYVEIWVGVLRDVDPSLSDDEARIKAHAGFGALNSTPHSTGRTKTAVEAHRERTR 193 Query 198 AVLRAMTVAAL 208 AVLRAM +AAL Sbjct 194 AVLRAMALAAL 204 >gi|331699875|ref|YP_004336114.1| regulatory protein TetR [Pseudonocardia dioxanivorans CB1190] gi|326954564|gb|AEA28261.1| regulatory protein TetR [Pseudonocardia dioxanivorans CB1190] Length=194 Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 100/186 (54%), Positives = 124/186 (67%), Gaps = 5/186 (2%) Query 24 SDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVSAR 83 + RR Q+L A RLFA GF V + D+GAA GVSGPA+YRHFP KE+LL E+LVG+S Sbjct 9 TGRREQILTVAARLFARHGFHGVSIADLGAAVGVSGPALYRHFPGKEALLAEMLVGISEH 68 Query 84 LLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAERQVRKAQR 143 LLAG R+ T + A L+ L++FHLDFAL DLI +QDRDLA+LP R+VR QR Sbjct 69 LLAGGRERATVDGDARATLEALVDFHLDFALTSPDLIVVQDRDLANLPPEPRRRVRLLQR 128 Query 144 QYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPARTVRARAVLRAM 203 YVE+WV VLRE+ PGL AR+ AH FGLLNSTPHS ++ A+LR M Sbjct 129 TYVEIWVDVLREITPGLTPEAARIAAHGAFGLLNSTPHSGARGSTR-----EVAALLRGM 183 Query 204 TVAALS 209 + AL+ Sbjct 184 ALTALT 189 >gi|169631615|ref|YP_001705264.1| TetR family transcriptional regulator [Mycobacterium abscessus ATCC 19977] gi|169243582|emb|CAM64610.1| Putative transcriptional regulator, TetR family [Mycobacterium abscessus] Length=200 Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 120/197 (61%), Positives = 144/197 (74%), Gaps = 5/197 (2%) Query 12 QPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKES 71 + E N+R + K+DRR QLL AA RL A RG+ VRLED+G+A G+SGPAIYRHFPNKE+ Sbjct 7 ESETPNKRERAKADRRDQLLRAAARLLAMRGYARVRLEDLGSAVGISGPAIYRHFPNKEA 66 Query 72 LLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLP 131 LLV+LL VS RLL G V +++ A ALDGLI+FHLDFAL E+DLIR+QDRDL LP Sbjct 67 LLVDLLTDVSRRLLEGGMTVAAAASSPAEALDGLIDFHLDFALNESDLIRVQDRDLDSLP 126 Query 132 AVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPA 191 A RQVR+ QR+YVE WV VL GL E+DAR+ AHA FGL+NSTP+S A S P+ Sbjct 127 ENARRQVRQYQRRYVEAWVQVLCRSQQGLDESDARIKAHAAFGLMNSTPYS--AGRSAPS 184 Query 192 RTVRARAVLRAMTVAAL 208 +T R VLR M VAAL Sbjct 185 QT---RTVLRQMVVAAL 198 >gi|88855169|ref|ZP_01129834.1| hypothetical protein A20C1_04786 [marine actinobacterium PHSC20C1] gi|88815697|gb|EAR25554.1| hypothetical protein A20C1_04786 [marine actinobacterium PHSC20C1] Length=191 Score = 184 bits (468), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 103/197 (53%), Positives = 127/197 (65%), Gaps = 8/197 (4%) Query 14 EATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLL 73 E RSQ K+DRR LL AA LFAERGF V LED+G+AAG+SGPA+YRHF K+ +L Sbjct 3 ETPTPRSQAKADRRQALLDAAASLFAERGFTRVSLEDLGSAAGISGPAVYRHFDGKQDVL 62 Query 74 VELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAV 133 +LV S L GA+ V +A AAL+ LIEFH++FALG ++IR+QDRDL L Sbjct 63 AAMLVDTSTDLCTGAKTVIESAATPRAALESLIEFHVEFALGNPNVIRVQDRDLDSLTDD 122 Query 134 AERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPART 193 + VR QR YVE+WV L +L+P A + R AHA FGL+NSTPHS + ADS Sbjct 123 DKHTVRALQRSYVELWVSTLAQLHPDAATTELRTRAHATFGLINSTPHSGR-ADST---- 177 Query 194 VRARAVLRAMTVAALSA 210 RAVL M +AAL A Sbjct 178 ---RAVLERMALAALDA 191 >gi|111222574|ref|YP_713368.1| TetR family transcriptional regulator [Frankia alni ACN14a] gi|111150106|emb|CAJ61801.1| putative TetR family transcriptional regulator (partial match) [Frankia alni ACN14a] Length=281 Score = 184 bits (467), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 95/165 (58%), Positives = 116/165 (71%), Gaps = 0/165 (0%) Query 23 KSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVSA 82 +S RR LL AA RLFAERGF V +E IGAA G+ GP IYRHF +K+++L ELLVG+S Sbjct 99 RSGRRDDLLQAAARLFAERGFRGVGIEQIGAAVGIRGPGIYRHFASKDAMLTELLVGISQ 158 Query 83 RLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAERQVRKAQ 142 LL GA+ V + + A ALD L+ H++FA+G DLI I DRDL LPA E +VR+ Q Sbjct 159 HLLHGAQTVLSADPSAADALDRLVRRHVEFAVGNPDLIVIHDRDLHSLPAPDEHEVRRLQ 218 Query 143 RQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAAD 187 R YVE+WVGVLR L P L AR+ AHA+FGL+NSTPHS A D Sbjct 219 RAYVELWVGVLRRLRPELTAPAARVRAHAIFGLINSTPHSSGALD 263 >gi|312199560|ref|YP_004019621.1| TetR family transcriptional regulator [Frankia sp. EuI1c] gi|311230896|gb|ADP83751.1| regulatory protein TetR [Frankia sp. EuI1c] Length=237 Score = 181 bits (460), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 109/206 (53%), Positives = 134/206 (66%), Gaps = 7/206 (3%) Query 10 PGQPEA--TNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFP 67 PG P A S RR QLL AA RL A+RG+ V + DIGAAAGVSGPA+Y+HFP Sbjct 34 PGPPAALPVTTPSAPAGARREQLLGAAARLMADRGYHGVSINDIGAAAGVSGPAVYKHFP 93 Query 68 NKESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDL 127 +K+++L ELLVG+S RLLA T +A+ ALD L+ +H+ FALG +LIRIQDRDL Sbjct 94 SKQAILTELLVGISERLLAEGTVRATAAADPDEALDALVRWHVSFALGSPELIRIQDRDL 153 Query 128 AHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAAD 187 A + A R VR+ QR+YVE+WV LR +P LAE AR HA FGLLNSTP+S A Sbjct 154 ASMDETAARLVRRLQRRYVELWVAQLRARDPELAEDAARATVHATFGLLNSTPYS---AT 210 Query 188 SKPARTVRARA--VLRAMTVAALSAA 211 AR RAR +L + +AAL AA Sbjct 211 GGAARLGRARMADLLHRLGLAALRAA 236 >gi|116669945|ref|YP_830878.1| TetR family transcriptional regulator [Arthrobacter sp. FB24] gi|116610054|gb|ABK02778.1| transcriptional regulator, TetR family [Arthrobacter sp. FB24] Length=225 Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 103/209 (50%), Positives = 137/209 (66%), Gaps = 4/209 (1%) Query 3 ASAPDGRPGQ---PEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSG 59 A +P G+ Q P T +RSQ K RR LL++A LFA GF V LED+GAAAGVSG Sbjct 8 AGSPAGQRAQTTLPVQTTQRSQAKESRRQALLSSAATLFALNGFNRVSLEDLGAAAGVSG 67 Query 60 PAIYRHFPNKESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADL 119 PA+YRHF K+++L LL+ VS LL G R V + + AAAL L++FH+DFAL D+ Sbjct 68 PAVYRHFAGKQAVLGALLLSVSQELLDGGRRVVADAGDPAAALARLVQFHVDFALSNPDV 127 Query 120 IRIQDRDLAHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNST 179 IR+QDRD ++L + VR QR YVE+WV VL+ L+ G A+ R+ AHA FGL+NST Sbjct 128 IRVQDRDFSNLSDDDQAAVRTLQRNYVELWVEVLQALHAGTDTAELRMRAHAAFGLINST 187 Query 180 PHSMKAADSKPARTVRARAVLRAMTVAAL 208 PHS+++ + A AR +L +M +AAL Sbjct 188 PHSVRSHGRRVA-AKSARPLLESMALAAL 215 >gi|320010675|gb|ADW05525.1| regulatory protein TetR [Streptomyces flavogriseus ATCC 33331] Length=204 Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 101/191 (53%), Positives = 128/191 (68%), Gaps = 7/191 (3%) Query 26 RRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVSARLL 85 RR Q+L A RLFAERGF V +++IGAA G+SGP +YRHFP K+++L ELLVG+S RLL Sbjct 14 RREQILREAARLFAERGFHGVGVDEIGAAVGISGPGLYRHFPGKDAMLAELLVGISERLL 73 Query 86 AGAR-----DVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAERQVRK 140 AG R D +R + A LD LIE H+DFAL + LI + DR+L L ++VR+ Sbjct 74 AGGRLRVSEDGASRGGSPDALLDALIEGHIDFALDDRPLITLHDRELDRLRDTDRKRVRQ 133 Query 141 AQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPARTVRARAVL 200 QRQYVEVWV V+R L P LAE +AR+ HAVFGLLNSTPH + ++ P RT A A+L Sbjct 134 LQRQYVEVWVDVVRALYPALAENEARVTVHAVFGLLNSTPH-LTRPEALPDRTATA-ALL 191 Query 201 RAMTVAALSAA 211 + A AA Sbjct 192 HRLARGAFEAA 202 >gi|220912172|ref|YP_002487481.1| TetR family transcriptional regulator [Arthrobacter chlorophenolicus A6] gi|219859050|gb|ACL39392.1| transcriptional regulator, TetR family [Arthrobacter chlorophenolicus A6] Length=220 Score = 174 bits (442), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 104/208 (50%), Positives = 137/208 (66%), Gaps = 2/208 (0%) Query 2 TASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPA 61 ++ D +P +RS+ K DRR LLAAA LFA GF +V LED+GAAAGVSGPA Sbjct 8 NSTGTDAPAARPAGATQRSKAKEDRRQALLAAAASLFAVNGFKSVSLEDLGAAAGVSGPA 67 Query 62 IYRHFPNKESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIR 121 +YRHFP K+++L +LL VS LL G R V +A+ AL L+EF +DFALG+ ++IR Sbjct 68 VYRHFPGKQAVLADLLATVSRELLDGGRKVVAENADPRLALRRLVEFQVDFALGKPEVIR 127 Query 122 IQDRDLAHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPH 181 +QDRDL++L + VR QR YVEVWV VL L+PG A+ R AHA FGL+NSTPH Sbjct 128 VQDRDLSNLSEQDQSAVRALQRSYVEVWVDVLSRLHPGTDAAELRTRAHATFGLINSTPH 187 Query 182 SMKAADSKPARTVRARAVLRAMTVAALS 209 S+++ + A AR +L M +AAL+ Sbjct 188 SVRSHGRRMA--AAARPLLEEMALAALT 213 >gi|325962777|ref|YP_004240683.1| TetR family transcriptional regulator [Arthrobacter phenanthrenivorans Sphe3] gi|323468864|gb|ADX72549.1| transcriptional regulator, TetR family [Arthrobacter phenanthrenivorans Sphe3] Length=244 Score = 174 bits (441), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 102/192 (54%), Positives = 131/192 (69%), Gaps = 1/192 (0%) Query 17 NRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVEL 76 +RS+ K RR LLAAA LFA GF V LED+GAAAGVSGPA+YRHFP K+++L +L Sbjct 43 TQRSRAKESRRQALLAAAASLFALHGFNRVSLEDLGAAAGVSGPAVYRHFPGKQAVLADL 102 Query 77 LVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAER 136 LV VS LL G R V + + + AAL L++F +DFALG+ D+IR+QDRD + L + Sbjct 103 LVTVSQELLDGGRRVVSENPDPLAALQRLVQFQVDFALGKPDVIRVQDRDFSSLSDQDQA 162 Query 137 QVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPARTVRA 196 VR QR YVEVWV VL L+PG ++ R+ AHA FGL+NSTPHS+++ K A T A Sbjct 163 AVRALQRSYVEVWVDVLARLHPGTDSSELRMRAHATFGLINSTPHSVRSHGRKIA-TGTA 221 Query 197 RAVLRAMTVAAL 208 R +L M +AAL Sbjct 222 RPLLEGMALAAL 233 >gi|325000907|ref|ZP_08122019.1| TetR family transcriptional regulator [Pseudonocardia sp. P1] Length=172 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 88/159 (56%), Positives = 115/159 (73%), Gaps = 1/159 (0%) Query 26 RRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVSARLL 85 RR Q+LA A RLFA GF V + D+GAA GVSGPA+YRHFP KE+LL E+L+ +S RLL Sbjct 11 RREQILAEAARLFARHGFHGVSIADLGAAVGVSGPALYRHFPGKEALLAEMLIDISERLL 70 Query 86 AGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAERQVRKAQRQY 145 G R R + AAL L++FH++FA E +LI +QDRDLA+LP A R VR+ QR Y Sbjct 71 EGGR-ARVRHDDPRAALADLVDFHVEFATREPELIVVQDRDLANLPDEARRTVRRLQRTY 129 Query 146 VEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMK 184 VE+WV LR ++PG+ ++AR +AH VFGLLNSTP++ + Sbjct 130 VELWVDTLRRVHPGVPPSEARTVAHGVFGLLNSTPYAPR 168 >gi|182438553|ref|YP_001826272.1| TetR family transcriptional regulator [Streptomyces griseus subsp. griseus NBRC 13350] gi|326779200|ref|ZP_08238465.1| regulatory protein TetR [Streptomyces cf. griseus XylebKG-1] gi|178467069|dbj|BAG21589.1| putative TetR-family transcriptional regulator [Streptomyces griseus subsp. griseus NBRC 13350] gi|326659533|gb|EGE44379.1| regulatory protein TetR [Streptomyces griseus XylebKG-1] Length=205 Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 98/192 (52%), Positives = 126/192 (66%), Gaps = 7/192 (3%) Query 26 RRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVSARLL 85 RR Q+L A RLFAERGF V +++IGAA G+SGP +YRHFP K+++L ELLVG+S RLL Sbjct 14 RREQILREAARLFAERGFHGVGVDEIGAAVGISGPGLYRHFPGKDAMLAELLVGISERLL 73 Query 86 AGAR-----DVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAERQVRK 140 G R D + LD LIE H+DFAL + LI + DR+L L ++VR+ Sbjct 74 EGGRMRVSEDAARGGGSPEELLDALIEGHIDFALDDRPLITLHDRELDRLRDTDRKRVRR 133 Query 141 AQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPARTVRARAVL 200 QR+YVEVWVGV+R L P LAE AR+ HAVFGLLNSTPH + ++ P R V A A+L Sbjct 134 LQREYVEVWVGVVRALYPALAENRARVTVHAVFGLLNSTPH-LARPEALPGRAVTA-ALL 191 Query 201 RAMTVAALSAAD 212 + A +AA+ Sbjct 192 HRLARGAFAAAE 203 >gi|163839307|ref|YP_001623712.1| TetR family transcriptional regulator [Renibacterium salmoninarum ATCC 33209] gi|162952783|gb|ABY22298.1| transcriptional regulator, TetR family [Renibacterium salmoninarum ATCC 33209] Length=219 Score = 171 bits (434), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 94/201 (47%), Positives = 128/201 (64%), Gaps = 2/201 (0%) Query 10 PGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNK 69 P Q +RS K+ R+ LL AA L+A+RGF V +E++GAAAGVSGPA+YRHF K Sbjct 17 PLQETEPTQRSLAKASRKQALLDAAAELYAQRGFNGVSIEELGAAAGVSGPAVYRHFSGK 76 Query 70 ESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAH 129 +++L LL+GVS LL G R V +A+ + L+ FH++FALG AD+IR+QDRDLA Sbjct 77 QAVLAALLMGVSEDLLTGGRAVAMDNADPETTIRKLVAFHVEFALGNADIIRVQDRDLAS 136 Query 130 LPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAA--D 187 + VR QR+YV++WV VL +L P + R+ AHA FGL+NSTPHS+++ Sbjct 137 MNDDDRHAVRTLQREYVQLWVQVLSQLYPRADTLELRVQAHAAFGLINSTPHSLRSYSRS 196 Query 188 SKPARTVRARAVLRAMTVAAL 208 K A AR +L M +A L Sbjct 197 GKIAPAKVARPILERMALAGL 217 >gi|239987889|ref|ZP_04708553.1| TetR family transcriptional regulator [Streptomyces roseosporus NRRL 11379] Length=205 Score = 171 bits (434), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 98/192 (52%), Positives = 125/192 (66%), Gaps = 7/192 (3%) Query 26 RRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVSARLL 85 RR Q+L A RLFAERGF V +++IGAA G+SGP +YRHFP K+++L ELLVG+S RLL Sbjct 14 RREQILREAARLFAERGFHGVGVDEIGAAVGISGPGLYRHFPGKDAMLAELLVGISERLL 73 Query 86 AGAR-----DVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAERQVRK 140 G R D + A LD LIE H+DFAL + LI + DR+L L ++VR+ Sbjct 74 EGGRLRVAEDEARGDGSPEALLDALIEGHIDFALDDRPLITLHDRELDRLRDTDRKRVRR 133 Query 141 AQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPARTVRARAVL 200 QR+YVEVWVGV+R L P L E AR+ HAVFGLLNSTPH + D+ P R A A+L Sbjct 134 LQREYVEVWVGVVRALYPSLPENRARVTVHAVFGLLNSTPH-LARPDALPGRAATA-ALL 191 Query 201 RAMTVAALSAAD 212 + A +AA+ Sbjct 192 HRLARGAFAAAE 203 >gi|290960186|ref|YP_003491368.1| TetR family transcriptional regulator [Streptomyces scabiei 87.22] gi|260649712|emb|CBG72827.1| putative TetR-family regulatory protein [Streptomyces scabiei 87.22] Length=198 Score = 171 bits (433), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 94/178 (53%), Positives = 120/178 (68%), Gaps = 3/178 (1%) Query 26 RRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVSARLL 85 RR Q+L A RLFAERGF V +++IGAA G+SGP +YRHF K+++L ELLVG+S +LL Sbjct 10 RREQILKEAARLFAERGFHGVGVDEIGAAVGISGPGLYRHFAGKDAMLAELLVGISGQLL 69 Query 86 AGARDVTTRSANLAAA--LDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAERQVRKAQR 143 GA+ + ++ A LD LIE H+DFAL + LI + DR+L L + VR+ QR Sbjct 70 TGAKRRVAEADGVSGAEVLDSLIEGHIDFALDDRPLITLHDRELDRLRDSDRKLVRQLQR 129 Query 144 QYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPARTVRARAVLR 201 QYVE+WVGVLRE+ PGLAE AR H+VFGLLNSTPH + A S P R A + R Sbjct 130 QYVELWVGVLREVYPGLAEPAARSAVHSVFGLLNSTPH-LGRAGSLPGRAATAELLHR 186 >gi|344999846|ref|YP_004802700.1| TetR family transcriptional regulator [Streptomyces sp. SirexAA-E] gi|344315472|gb|AEN10160.1| transcriptional regulator, TetR family [Streptomyces sp. SirexAA-E] Length=215 Score = 171 bits (432), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 97/190 (52%), Positives = 124/190 (66%), Gaps = 6/190 (3%) Query 26 RRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVSARLL 85 RR Q+L A RLFAERGF V +++IGAA G+SGP +YRHFP K+++L ELLVG+S RLL Sbjct 22 RREQILKEAARLFAERGFHGVGVDEIGAAVGISGPGLYRHFPGKDAMLAELLVGISERLL 81 Query 86 AGARDVTTRSA----NLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAERQVRKA 141 G R V+ A + A LD LIE H+DFAL + LI + DR+L L ++VR+ Sbjct 82 DGGRRVSEERAAPGGSPEALLDALIEGHIDFALDDRPLITLHDRELDRLRDTDRKRVRRL 141 Query 142 QRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPARTVRARAVLR 201 QRQYVEVWV +R L P L E +AR+ HAVFGLLNSTPH + ++ P R A A+L Sbjct 142 QRQYVEVWVEAVRALYPSLPEGEARVTVHAVFGLLNSTPH-LARPEALPGRAATA-ALLH 199 Query 202 AMTVAALSAA 211 + A AA Sbjct 200 RLARGAFEAA 209 >gi|345015342|ref|YP_004817696.1| regulatory protein TetR [Streptomyces violaceusniger Tu 4113] gi|344041691|gb|AEM87416.1| regulatory protein TetR [Streptomyces violaceusniger Tu 4113] Length=208 Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 99/190 (53%), Positives = 123/190 (65%), Gaps = 6/190 (3%) Query 26 RRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVSARLL 85 RR Q+L A RLFAERGF V +++IGAA G+SGP +YRHFP KE++L ELLVG+S RLL Sbjct 10 RREQILKEAARLFAERGFHGVGVDEIGAAVGISGPGLYRHFPGKEAMLAELLVGISGRLL 69 Query 86 AGA--RDVTTRSANLAAA--LDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAERQVRKA 141 G R A LA A LD LIE H+DFA+ + LI + DR+L L + VR Sbjct 70 TGGKRRAAEGEGAGLAPAEVLDSLIEGHIDFAIDDRPLIILHDRELDRLRDTDRKLVRSL 129 Query 142 QRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPARTVRARAVLR 201 QRQYVE+WV V+RE+ P LAEA+AR HAVFGLLNSTPH + + P R A A+L Sbjct 130 QRQYVELWVEVVREVYPRLAEAEARACVHAVFGLLNSTPH-LGRPGALPGRAATA-ALLH 187 Query 202 AMTVAALSAA 211 + + A A Sbjct 188 RLALGAFGGA 197 >gi|289771485|ref|ZP_06530863.1| TetR family transcriptional regulator [Streptomyces lividans TK24] gi|289701684|gb|EFD69113.1| TetR family transcriptional regulator [Streptomyces lividans TK24] Length=208 Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 101/197 (52%), Positives = 125/197 (64%), Gaps = 14/197 (7%) Query 26 RRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVSARLL 85 RR Q+L A RLFAERGF V +++IGAA G+SGP +YRHFP K+++L ELLVG+S LL Sbjct 10 RREQILKEAARLFAERGFHGVGVDEIGAAVGISGPGLYRHFPGKDAMLAELLVGISDSLL 69 Query 86 AGAR------DVTTRSANLAAA------LDGLIEFHLDFALGEADLIRIQDRDLAHLPAV 133 GA+ D T S A A LD LIE H+DFAL + LI + DR+L L Sbjct 70 TGAKRRLAEADGATGSGARAGADGPGAVLDSLIEGHIDFALDDRPLITLHDRELDRLRDA 129 Query 134 AERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPART 193 + VR+ QRQYVE+WVGVLRE+ P LAE AR H+VFGLLNSTPH + S P R Sbjct 130 DRKMVRQLQRQYVELWVGVLREVYPALAEPAARSAVHSVFGLLNSTPH-LGRPGSLPGRA 188 Query 194 VRARAVLRAMTVAALSA 210 V A ++L M A +A Sbjct 189 VTA-SLLHRMARGAFAA 204 >gi|302545218|ref|ZP_07297560.1| TetR family transcriptional regulator [Streptomyces hygroscopicus ATCC 53653] gi|302462836|gb|EFL25929.1| TetR family transcriptional regulator [Streptomyces himastatinicus ATCC 53653] Length=212 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 97/190 (52%), Positives = 123/190 (65%), Gaps = 6/190 (3%) Query 26 RRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVSARLL 85 RR Q+L A RLFAERGF V +++IGAA G+SGP +YRHF KE++L ELLVG+S RLL Sbjct 10 RREQILKEAARLFAERGFHGVGVDEIGAAVGISGPGLYRHFAGKEAMLAELLVGISGRLL 69 Query 86 AGARDVTTRSANL----AAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAERQVRKA 141 G + T + AA LD LIE H+DFAL + LI + DR+L L + VR Sbjct 70 TGGKRRTAEATEAGDAPAALLDSLIEGHIDFALDDRPLIILHDRELDRLRDTDRKLVRSL 129 Query 142 QRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPARTVRARAVLR 201 QRQYVE+WV V+R++ PGL EA+AR HAVFGLLNSTPH + + P R A A+L Sbjct 130 QRQYVELWVEVVRQVYPGLTEAEARACVHAVFGLLNSTPH-LGRPGALPGREATA-ALLH 187 Query 202 AMTVAALSAA 211 + + A AA Sbjct 188 RLALGAFGAA 197 >gi|302560532|ref|ZP_07312874.1| TetR family transcriptional regulator [Streptomyces griseoflavus Tu4000] gi|302478150|gb|EFL41243.1| TetR family transcriptional regulator [Streptomyces griseoflavus Tu4000] Length=199 Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 92/170 (55%), Positives = 115/170 (68%), Gaps = 4/170 (2%) Query 26 RRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVSARLL 85 RR Q+L A RLFAERGF V +++IGAA G+SGP +YRHFP K+++L ELLVG+S +LL Sbjct 10 RREQILKEAARLFAERGFHGVGVDEIGAAVGISGPGLYRHFPGKDAMLAELLVGISGQLL 69 Query 86 AGARDVTTRSANLAA---ALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAERQVRKAQ 142 GA+ + AA LD LIE H+DFAL + LI + DR+L L + VR+ Q Sbjct 70 TGAKRRLQEADGAAAPEAVLDSLIEGHIDFALDDRPLITLHDRELDRLRDTDRKLVRQLQ 129 Query 143 RQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPAR 192 RQYVE+WVGV+REL P LAE AR H+VFGLLNSTPH + S P R Sbjct 130 RQYVELWVGVVRELYPELAEPAARSAVHSVFGLLNSTPHLTRPG-SLPGR 178 >gi|297160331|gb|ADI10043.1| TetR family transcriptional regulator [Streptomyces bingchenggensis BCW-1] Length=203 Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 94/191 (50%), Positives = 123/191 (65%), Gaps = 5/191 (2%) Query 26 RRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVSARLL 85 RR Q+L A RLFAERGF V +++IGAA G+SGP +YRHFP KE++L ELLVG+S RLL Sbjct 10 RREQILKEAARLFAERGFHGVGVDEIGAAVGISGPGLYRHFPGKEAMLAELLVGISGRLL 69 Query 86 AGAR----DVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAERQVRKA 141 G + + + + + A LD L+ H+DFAL + LI + DR+L L + VR Sbjct 70 TGGKQRAAEASGQERDPGAVLDSLVRGHIDFALDDRPLIILHDRELDRLRDTDRKLVRSL 129 Query 142 QRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPARTVRARAVLR 201 QRQYVE+WV V+RE++P LAE +AR HAVFGLLNSTPH + + P R A + R Sbjct 130 QRQYVELWVQVVREVHPRLAEPEARACVHAVFGLLNSTPH-LSRPGALPGRAATAELLHR 188 Query 202 AMTVAALSAAD 212 A +AAD Sbjct 189 LALGAFRAAAD 199 Lambda K H 0.321 0.133 0.373 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 257507162856 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40