BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2514c
Length=153
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609651|ref|NP_217030.1| hypothetical protein Rv2514c [Mycob... 313 5e-84
gi|289575219|ref|ZP_06455446.1| conserved hypothetical protein [... 311 2e-83
gi|340627531|ref|YP_004745983.1| hypothetical protein MCAN_25561... 306 5e-82
gi|254776179|ref|ZP_05217695.1| hypothetical protein MaviaA2_161... 240 4e-62
gi|289444045|ref|ZP_06433789.1| conserved hypothetical protein [... 138 2e-31
gi|289762682|ref|ZP_06522060.1| hypothetical protein TBIG_03992 ... 137 6e-31
gi|296132594|ref|YP_003639841.1| hypothetical protein TherJR_107... 113 1e-23
gi|146343188|ref|YP_001208236.1| hypothetical protein BRADO6391 ... 97.1 8e-19
gi|295696818|ref|YP_003590056.1| hypothetical protein Btus_2239 ... 96.7 1e-18
gi|333997748|ref|YP_004530360.1| PIN domain-containing protein [... 92.0 2e-17
gi|188587121|ref|YP_001918666.1| conserved hypothetical protein ... 88.2 4e-16
gi|317132860|ref|YP_004092174.1| hypothetical protein Ethha_1921... 80.5 8e-14
gi|330819494|ref|YP_004348356.1| hypothetical protein bgla_2g036... 78.6 3e-13
gi|78188289|ref|YP_378627.1| hypothetical protein Cag_0310 [Chlo... 78.2 4e-13
gi|126436462|ref|YP_001072153.1| hypothetical protein Mjls_3886 ... 77.0 7e-13
gi|307608953|emb|CBW98363.1| hypothetical protein LPW_02161 [Leg... 77.0 8e-13
gi|134292092|ref|YP_001115828.1| hypothetical protein Bcep1808_3... 75.9 2e-12
gi|218960563|ref|YP_001740338.1| hypothetical protein CLOAM0222 ... 75.5 3e-12
gi|313205451|ref|YP_004044108.1| hypothetical protein Palpr_2995... 74.7 4e-12
gi|206564110|ref|YP_002234873.1| hypothetical protein BCAM2274a ... 73.6 1e-11
gi|91214771|ref|ZP_01251744.1| hypothetical protein P700755_1793... 73.2 1e-11
gi|254427245|ref|ZP_05040952.1| hypothetical protein ADG881_475 ... 70.1 9e-11
gi|15837099|ref|NP_297787.1| hypothetical protein XF0497 [Xylell... 68.6 3e-10
gi|307299104|ref|ZP_07578906.1| conserved hypothetical protein [... 68.2 4e-10
gi|229588242|ref|YP_002870361.1| hypothetical protein PFLU0694 [... 66.6 1e-09
gi|319427794|gb|ADV55868.1| conserved hypothetical protein [Shew... 65.1 3e-09
gi|86143906|ref|ZP_01062274.1| PIN domain protein [Leeuwenhoekie... 65.1 3e-09
gi|260219902|emb|CBA26899.1| hypothetical protein Csp_G38940 [Cu... 64.3 5e-09
gi|21232397|ref|NP_638314.1| hypothetical protein XCC2966 [Xanth... 63.5 9e-09
gi|170783538|ref|YP_001742031.1| hypothetical protein pSI-1_93 [... 62.4 2e-08
gi|344045914|gb|EGV41583.1| hypothetical protein CgS9114_02203 [... 62.4 2e-08
gi|189501386|ref|YP_001960856.1| PIN domain-containing protein [... 62.0 3e-08
gi|336314469|ref|ZP_08569387.1| hypothetical protein Rhein_0749 ... 62.0 3e-08
gi|119357306|ref|YP_911950.1| PilT domain-containing protein [Ch... 62.0 3e-08
gi|332665217|ref|YP_004448005.1| hypothetical protein Halhy_3273... 61.2 5e-08
gi|227356911|ref|ZP_03841290.1| PilT domain protein [Proteus mir... 59.7 1e-07
gi|189347945|ref|YP_001944474.1| PIN domain-containing protein [... 58.9 2e-07
gi|227820710|ref|YP_002824680.1| hypothetical protein NGR_c01240... 58.5 3e-07
gi|251772916|gb|EES53475.1| conserved hypothetical protein [Lept... 57.4 8e-07
gi|226226350|ref|YP_002760456.1| hypothetical protein GAU_0944 [... 57.0 8e-07
gi|288957072|ref|YP_003447413.1| hypothetical protein AZL_002310... 57.0 9e-07
gi|302390347|ref|YP_003826168.1| PilT domain-containing protein ... 56.2 1e-06
gi|170782488|ref|YP_001710821.1| hypothetical protein CMS_2134 [... 56.2 1e-06
gi|289706684|ref|ZP_06503032.1| conserved hypothetical protein [... 55.5 2e-06
gi|78043888|ref|YP_359164.1| PilT domain-containing protein [Car... 54.3 6e-06
gi|284040999|ref|YP_003390929.1| hypothetical protein Slin_6170 ... 53.9 8e-06
gi|261419670|ref|YP_003253352.1| PilT domain-containing protein ... 53.9 9e-06
gi|333976177|gb|EGL77049.1| PIN domain protein [Veillonella parv... 53.5 9e-06
gi|292669194|ref|ZP_06602620.1| conserved hypothetical protein [... 52.8 2e-05
gi|50086396|ref|YP_047906.1| hypothetical protein ACIAD3428 [Aci... 52.8 2e-05
>gi|15609651|ref|NP_217030.1| hypothetical protein Rv2514c [Mycobacterium tuberculosis H37Rv]
gi|15842045|ref|NP_337082.1| hypothetical protein MT2590 [Mycobacterium tuberculosis CDC1551]
gi|31793695|ref|NP_856188.1| hypothetical protein Mb2543c [Mycobacterium bovis AF2122/97]
70 more sequence titles
Length=153
Score = 313 bits (802), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 152/153 (99%), Positives = 153/153 (100%), Gaps = 0/153 (0%)
Query 1 VLYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWA 60
+LYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWA
Sbjct 1 MLYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWA 60
Query 61 DGQTGLFCPLDEQIQQAARHILRLHPNMVRQGGRRSAADPFVIALAMVNNATVVTQETAS 120
DGQTGLFCPLDEQIQQAARHILRLHPNMVRQGGRRSAADPFVIALAMVNNATVVTQETAS
Sbjct 61 DGQTGLFCPLDEQIQQAARHILRLHPNMVRQGGRRSAADPFVIALAMVNNATVVTQETAS 120
Query 121 GNIEKPRIPDVCDALGVPWLTLMGYIEAQGWTF 153
GNIEKPRIPDVCDALGVPWLTLMGYIEAQGWTF
Sbjct 121 GNIEKPRIPDVCDALGVPWLTLMGYIEAQGWTF 153
>gi|289575219|ref|ZP_06455446.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|339632540|ref|YP_004724182.1| hypothetical protein MAF_25290 [Mycobacterium africanum GM041182]
gi|289539650|gb|EFD44228.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|339331896|emb|CCC27599.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
Length=153
Score = 311 bits (798), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/153 (99%), Positives = 152/153 (99%), Gaps = 0/153 (0%)
Query 1 VLYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWA 60
+LYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWA
Sbjct 1 MLYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWA 60
Query 61 DGQTGLFCPLDEQIQQAARHILRLHPNMVRQGGRRSAADPFVIALAMVNNATVVTQETAS 120
DGQTGLFCPLDEQIQQAARHILRLHPNMVRQGGRRSA DPFVIALAMVNNATVVTQETAS
Sbjct 61 DGQTGLFCPLDEQIQQAARHILRLHPNMVRQGGRRSAVDPFVIALAMVNNATVVTQETAS 120
Query 121 GNIEKPRIPDVCDALGVPWLTLMGYIEAQGWTF 153
GNIEKPRIPDVCDALGVPWLTLMGYIEAQGWTF
Sbjct 121 GNIEKPRIPDVCDALGVPWLTLMGYIEAQGWTF 153
>gi|340627531|ref|YP_004745983.1| hypothetical protein MCAN_25561 [Mycobacterium canettii CIPT
140010059]
gi|340005721|emb|CCC44887.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=153
Score = 306 bits (785), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 148/153 (97%), Positives = 152/153 (99%), Gaps = 0/153 (0%)
Query 1 VLYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWA 60
+LYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWA
Sbjct 1 MLYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWA 60
Query 61 DGQTGLFCPLDEQIQQAARHILRLHPNMVRQGGRRSAADPFVIALAMVNNATVVTQETAS 120
DGQTGLFCPLDEQIQQAARHILRLHPNMVRQGGRRSAADPFVIALAMVNN TVVTQETA+
Sbjct 61 DGQTGLFCPLDEQIQQAARHILRLHPNMVRQGGRRSAADPFVIALAMVNNGTVVTQETAT 120
Query 121 GNIEKPRIPDVCDALGVPWLTLMGYIEAQGWTF 153
G+IEKPRIPDVCDALGVPWLTLMG+IEAQGWTF
Sbjct 121 GHIEKPRIPDVCDALGVPWLTLMGFIEAQGWTF 153
>gi|254776179|ref|ZP_05217695.1| hypothetical protein MaviaA2_16115 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=153
Score = 240 bits (613), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 114/153 (75%), Positives = 132/153 (87%), Gaps = 0/153 (0%)
Query 1 VLYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWA 60
+LYSFDTSAILNGRRDLFRP VF +LW R+EDAI+AG +RSVDEV+ EL RRDDDA++WA
Sbjct 1 MLYSFDTSAILNGRRDLFRPTVFHTLWARIEDAIAAGLVRSVDEVRHELNRRDDDARQWA 60
Query 61 DGQTGLFCPLDEQIQQAARHILRLHPNMVRQGGRRSAADPFVIALAMVNNATVVTQETAS 120
D Q LF PL++ IQQ A ILRL+P +V QGGRRSAADPFVIALAMV+N TVVT+ETAS
Sbjct 61 DAQLDLFVPLEQPIQQGATQILRLYPRLVSQGGRRSAADPFVIALAMVHNGTVVTEETAS 120
Query 121 GNIEKPRIPDVCDALGVPWLTLMGYIEAQGWTF 153
G +++PRIPDVC A+GVP L LMGYIEAQGWTF
Sbjct 121 GKLDRPRIPDVCAAVGVPCLNLMGYIEAQGWTF 153
>gi|289444045|ref|ZP_06433789.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289416964|gb|EFD14204.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
Length=66
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/66 (100%), Positives = 66/66 (100%), Gaps = 0/66 (0%)
Query 88 MVRQGGRRSAADPFVIALAMVNNATVVTQETASGNIEKPRIPDVCDALGVPWLTLMGYIE 147
MVRQGGRRSAADPFVIALAMVNNATVVTQETASGNIEKPRIPDVCDALGVPWLTLMGYIE
Sbjct 1 MVRQGGRRSAADPFVIALAMVNNATVVTQETASGNIEKPRIPDVCDALGVPWLTLMGYIE 60
Query 148 AQGWTF 153
AQGWTF
Sbjct 61 AQGWTF 66
>gi|289762682|ref|ZP_06522060.1| hypothetical protein TBIG_03992 [Mycobacterium tuberculosis GM
1503]
gi|289710188|gb|EFD74204.1| hypothetical protein TBIG_03992 [Mycobacterium tuberculosis GM
1503]
Length=75
Score = 137 bits (345), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/70 (96%), Positives = 68/70 (98%), Gaps = 0/70 (0%)
Query 1 VLYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWA 60
+LYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWA
Sbjct 1 MLYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWA 60
Query 61 DGQTGLFCPL 70
DGQTGLF L
Sbjct 61 DGQTGLFLSL 70
>gi|296132594|ref|YP_003639841.1| hypothetical protein TherJR_1076 [Thermincola sp. JR]
gi|296031172|gb|ADG81940.1| conserved hypothetical protein [Thermincola potens JR]
Length=154
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/154 (39%), Positives = 90/154 (59%), Gaps = 2/154 (1%)
Query 2 LYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWAD 61
+Y DTSA+L+G + + P +F+SLW + + + + S DEV EL R DDD W +
Sbjct 1 MYCIDTSALLHGWKRDYPPDIFKSLWDNLTELGQSNNLISPDEVLLELKRGDDDLCAWME 60
Query 62 GQTGLFCPLDEQIQQAARHILRLHPNMVRQGGRRSA-ADPFVIALAMVNNATVVTQETAS 120
+ +F DE+ Q+ I+ P+ V + ADP+VIA+A V NATVVT E A
Sbjct 61 EREYIFIEPDEEAQKVVAEIVNRFPDFVPEESHDGVWADPYVIAVAKVKNATVVTGEKAV 120
Query 121 G-NIEKPRIPDVCDALGVPWLTLMGYIEAQGWTF 153
G ++P+IP++C LG+ +TL+ I +GWTF
Sbjct 121 GPGAKRPKIPNICQELGIECITLLELIRREGWTF 154
>gi|146343188|ref|YP_001208236.1| hypothetical protein BRADO6391 [Bradyrhizobium sp. ORS 278]
gi|146195994|emb|CAL80021.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
Length=156
Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/153 (34%), Positives = 85/153 (56%), Gaps = 3/153 (1%)
Query 2 LYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELAR-RDDDAKRWA 60
+Y DTSA++ + ++P F LW +++ ++ G++ S V RE + R ++ W
Sbjct 5 IYCIDTSALIAAWYERYKPNRFPKLWDQLDQLVTDGRLVSSTLVLRECNKQRSEELHGWL 64
Query 61 DGQTGLFCPLDEQIQQAARHILRLHPNMVRQGGRRSAADPFVIALAMVNNATVVTQETAS 120
+ +F DE +Q HI+ + +V G ++ ADPFVIALA VN+ TV+T+ET
Sbjct 65 KPREAMFISPDEAVQLQVDHIVNTYTGLVSAGKQKFQADPFVIALAKVNSYTVITEETGI 124
Query 121 GNIEKPRIPDVCDALGVPWLTLMGYIEAQGWTF 153
G++ K IP VC+ + V + LM I+ + W
Sbjct 125 GSLGK--IPGVCNHMKVECINLMQLIDEEDWVL 155
>gi|295696818|ref|YP_003590056.1| hypothetical protein Btus_2239 [Bacillus tusciae DSM 2912]
gi|295412420|gb|ADG06912.1| conserved hypothetical protein [Bacillus tusciae DSM 2912]
Length=154
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/154 (36%), Positives = 83/154 (54%), Gaps = 2/154 (1%)
Query 2 LYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWAD 61
+Y DTS+++ R+ + P VF SLW ++ I ++ S +V EL + D RW
Sbjct 1 MYYMDTSSLITAWREQYPPDVFPSLWVNLDRLIRETRLVSPIDVFYELEKGGDALFRWVK 60
Query 62 GQTGLFCPLDEQIQQAARHILRLHPNMVRQGGRRSA-ADPFVIALAMVNNATVVTQET-A 119
+ G+F D +IQ RH++ P ++ Q ADP+V+ALA VN A VVT+E A
Sbjct 61 ERRGMFIEPDNEIQNIVRHLVNKFPQIIPQFSHTGVWADPWVVALAKVNGAIVVTEEKQA 120
Query 120 SGNIEKPRIPDVCDALGVPWLTLMGYIEAQGWTF 153
S N + +IP++C LGV + + I + W F
Sbjct 121 SSNATRIKIPNMCIDLGVEHINFLELIRRESWNF 154
>gi|333997748|ref|YP_004530360.1| PIN domain-containing protein [Treponema primitia ZAS-2]
gi|333739486|gb|AEF84976.1| PIN domain protein [Treponema primitia ZAS-2]
Length=158
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/162 (36%), Positives = 81/162 (50%), Gaps = 14/162 (8%)
Query 1 VLYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELAR--RDDDAKR 58
++Y FD + + R FR A F + W R + +S G I SV EV EL R R D+ +
Sbjct 1 MIYVFDNNTLAGIFRHYFR-ASFPTFWERFDTMVSDGTICSVREVNNELKRMARGDELEA 59
Query 59 WADGQTGLFC-PLDE------QIQQAARHILRLHPNMVRQGGRRSAADPFVIALAMVNNA 111
WA T FC P + QI + L + GG + ADPF+IA A ++
Sbjct 60 WAKTHTNFFCLPTSDELRFITQIYSVPHFLQNLGAKKLFNGG--AFADPFLIAKAYISGG 117
Query 112 TVVTQETASGNIEKPRIPDVCDALGVPWLTLMGYIEAQGWTF 153
TVVTQE + K IP++C +P+ L G+++AQ W F
Sbjct 118 TVVTQEKLKPHGAK--IPNICKHFSIPYTDLQGFLQAQNWVF 157
>gi|188587121|ref|YP_001918666.1| conserved hypothetical protein [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179351808|gb|ACB86078.1| conserved hypothetical protein [Natranaerobius thermophilus JW/NM-WN-LF]
Length=154
Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/154 (32%), Positives = 78/154 (51%), Gaps = 2/154 (1%)
Query 2 LYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWAD 61
+Y DTS++++ R + P VF SLW ++ I + + +EV EL R DD WA
Sbjct 1 MYCIDTSSLIHCWRRDYPPDVFASLWENIDILIDNNTLFAPEEVLHELDRGGDDLYEWAK 60
Query 62 GQTGLFCPLDEQIQQAARHILRLHPNMVRQGGRRSA-ADPFVIALAMVNNATVVTQETAS 120
+ +F D IQ I+ HP + + ADP+V+ALA A V+T E
Sbjct 61 NRKSMFISSDYDIQIIVSDIVNRHPKFLPETSYTGVWADPYVVALAYNCEAYVITGEKRV 120
Query 121 G-NIEKPRIPDVCDALGVPWLTLMGYIEAQGWTF 153
G N ++ +IP++CD + + ++ I Q W+F
Sbjct 121 GPNAKQLKIPNICDFYNIECVNVLEMIRHQRWSF 154
>gi|317132860|ref|YP_004092174.1| hypothetical protein Ethha_1921 [Ethanoligenens harbinense YUAN-3]
gi|315470839|gb|ADU27443.1| hypothetical protein Ethha_1921 [Ethanoligenens harbinense YUAN-3]
Length=162
Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/153 (31%), Positives = 80/153 (53%), Gaps = 8/153 (5%)
Query 3 YSFDTSAILNGR-RDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWAD 61
Y D+S+I + + + R V+R LW R+E I +I + E+ E+ +D D + W
Sbjct 16 YIIDSSSIFSQKDNEPHRRTVYRGLWKRIEQLIQEKEIVTSSEIADEI--KDKDLESWLQ 73
Query 62 GQTGLFCPLDEQIQQAARHILRLHPNMVRQGGRRSAADPFVIALAMVNNATVVTQETASG 121
Q + P+DE IQQ ++ +P +V +S+ D F+IA AM + T++T+E
Sbjct 74 NQQCVILPVDESIQQNVTRVVSNNPKLVDFKQVKSSGDAFLIATAMEYHLTIITEE---- 129
Query 122 NIEKP-RIPDVCDALGVPWLTLMGYIEAQGWTF 153
N + P +IP V + +GV + + + + W F
Sbjct 130 NQDSPYKIPKVAENMGVKAIDINELCQIEDWQF 162
>gi|330819494|ref|YP_004348356.1| hypothetical protein bgla_2g03680 [Burkholderia gladioli BSR3]
gi|327371489|gb|AEA62844.1| hypothetical protein bgla_2g03680 [Burkholderia gladioli BSR3]
Length=165
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/168 (34%), Positives = 87/168 (52%), Gaps = 18/168 (10%)
Query 1 VLYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARR--DDDAKR 58
++Y FDTS+I + + F P VFRS+W +E+ +S ++ S EVQREL R+ DD +
Sbjct 1 MIYVFDTSSIRSLQH--FYPRVFRSIWDGLEELVSQRRLISTREVQRELERQAVSDDVLK 58
Query 59 WADGQTGLF-CPLDEQIQQAARHILRLHPNMVRQGGRRS-----AADPFVIALAMVNNAT 112
W +F P D++++ A I R+ G ++S ADPF+I A V + T
Sbjct 59 WVKDHAAIFTTPGDDELRFVAE-IFRVRHFQALIGQQQSLKGMPVADPFLIECAKVRDGT 117
Query 113 VVTQE--TASGNIEKP-----RIPDVCDALGVPWLTLMGYIEAQGWTF 153
+VT+E G P +IP+VC +P + L ++ Q W F
Sbjct 118 LVTEEGWARPGGPLMPKQHAAKIPNVCAHFRIPCIDLEEFMHQQDWRF 165
>gi|78188289|ref|YP_378627.1| hypothetical protein Cag_0310 [Chlorobium chlorochromatii CaD3]
gi|78170488|gb|ABB27584.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3]
Length=170
Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/156 (30%), Positives = 73/156 (47%), Gaps = 5/156 (3%)
Query 3 YSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWADG 62
+ D + ++ + + P + S W + + + I + V E+ R DDD +W
Sbjct 8 FCLDANVLIQAWQKYYSPKICPSYWDMLNELGANNIILMPEMVYEEIVRTDDDLSKWLKS 67
Query 63 QTGLFCPLDEQIQQAARHILRLHPN---MVRQGGRRSAADPFVIALAMVNNATVVTQE-- 117
T +DEQ+ + + I PN +V RS ADP+VIA A+ ATVVT+E
Sbjct 68 STIPIRKIDEQVTKCLKDIYSADPNHKYLVDNTKARSLADPWVIAHAIREKATVVTKEEK 127
Query 118 TASGNIEKPRIPDVCDALGVPWLTLMGYIEAQGWTF 153
+ N K +IP+VC+ + V W+ I G F
Sbjct 128 VTAINTTKIKIPNVCEKMNVSWINDFQLIIELGIMF 163
>gi|126436462|ref|YP_001072153.1| hypothetical protein Mjls_3886 [Mycobacterium sp. JLS]
gi|126236262|gb|ABN99662.1| hypothetical protein Mjls_3886 [Mycobacterium sp. JLS]
Length=156
Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/154 (29%), Positives = 75/154 (49%), Gaps = 6/154 (3%)
Query 3 YSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWADG 62
++ DT+ ++ +R+ R +F LW +E ++S+ + V RE+ R DD +WA
Sbjct 3 FTLDTNILIGLQRNYPRD-IFPGLWESIEASVSSQDSCVCEAVLREIKRGGDDLHKWAKD 61
Query 63 QTGLFCPLDEQIQQAARHILRLHPNMVRQGGRRSAADPFVIALAMVNNATVVTQETASG- 121
G C + I R HP V+ G+ + ADPFV+A A + +VT+E+ G
Sbjct 62 LPGFVCAVSGAELTTVAEIARAHPGWVQ--GQLNEADPFVVAHAKAERSVIVTEESRKGP 119
Query 122 --NIEKPRIPDVCDALGVPWLTLMGYIEAQGWTF 153
+ + +IP++ D V + Y+ GW F
Sbjct 120 NTDDKNQKIPNIADEHSVATMKFFDYVRTNGWAF 153
>gi|307608953|emb|CBW98363.1| hypothetical protein LPW_02161 [Legionella pneumophila 130b]
Length=165
Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/159 (31%), Positives = 81/159 (51%), Gaps = 14/159 (8%)
Query 3 YSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWADG 62
Y D++A + + + + W + A + I S+ VQ EL +D+ +WA
Sbjct 3 YLLDSNAFIQAHKTYYGMLICPGFWDWILHANNNKDISSIKFVQDELETGNDELAKWAKD 62
Query 63 QTGLFCPLDEQ-----IQQAARHILRLHPNMVRQGG---RRSAADPFVIALAMVNNATVV 114
+ +F P+D++ +QQ H+ L ++ G ADP++IA AMV+NATVV
Sbjct 63 NSHIFLPIDDESTQQAMQQVVNHVYSL--TNLKTGAVDQFLKGADPWLIAKAMVSNATVV 120
Query 115 TQETASGNIEK-PRIPDVCDALGVPWLT---LMGYIEAQ 149
TQET N +K +IP+VC + ++ L+ ++AQ
Sbjct 121 TQETIDLNAKKIIKIPNVCQHFRINYINTFELLHLLQAQ 159
>gi|134292092|ref|YP_001115828.1| hypothetical protein Bcep1808_3375 [Burkholderia vietnamiensis
G4]
gi|134135249|gb|ABO56363.1| conserved hypothetical protein [Burkholderia vietnamiensis G4]
Length=165
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/168 (34%), Positives = 83/168 (50%), Gaps = 18/168 (10%)
Query 1 VLYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARR--DDDAKR 58
++Y FDTS+I + + F P VFRS+W +E +S ++ S EV E+ R+ D
Sbjct 1 MIYVFDTSSIRSLQH--FYPRVFRSIWDGIEKLVSQRRLISTREVLNEIERQAVSADVSA 58
Query 59 WADGQTGLF-CPLDEQIQQAA-----RHILRLHPNMVRQGGRRSAADPFVIALAMVNNAT 112
W G +F P ++++ A +H L R G ADPFVIA A V T
Sbjct 59 WVKGNRSVFTTPTVDELRFVAAILRIKHFQALIGQQQRLKG-TPVADPFVIACARVRRGT 117
Query 113 VVTQE----TASGNIEKP---RIPDVCDALGVPWLTLMGYIEAQGWTF 153
VVT+E +G + KP +IP+VC +P + L ++ Q W F
Sbjct 118 VVTEEGWQRAGAGLVPKPHAAKIPNVCAHFEIPCIDLEEFMHQQDWQF 165
>gi|218960563|ref|YP_001740338.1| hypothetical protein CLOAM0222 [Candidatus Cloacamonas acidaminovorans]
gi|167729220|emb|CAO80131.1| conserved hypothetical protein [Candidatus Cloacamonas acidaminovorans]
Length=164
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/154 (30%), Positives = 77/154 (50%), Gaps = 3/154 (1%)
Query 2 LYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRW-A 60
+Y D++A++ + P + + + +E I +I +EV E+ + DD +W
Sbjct 8 VYCLDSNALIEPWNKYYSPKI-SNYFDILERLIIENRIFCTEEVALEIKKGDDLLYKWLK 66
Query 61 DGQTGLFCPLDEQIQQAARHILRLHPNMVRQGGRRSAADPFVIALAMVNNATVVTQETAS 120
++ +D +Q+ R IL PN++ +RS ADP+VIA A NA VVT+E
Sbjct 67 KNESNFVKTIDSDVQKKVRIILSQFPNLIDSKKQRSMADPWVIAHAWSLNAVVVTKEYPI 126
Query 121 GNIEKP-RIPDVCDALGVPWLTLMGYIEAQGWTF 153
N++K +IPDVC + + +I G TF
Sbjct 127 DNVKKHCKIPDVCKFYNICCMDDWQFIAELGITF 160
>gi|313205451|ref|YP_004044108.1| hypothetical protein Palpr_2995 [Paludibacter propionicigenes
WB4]
gi|312444767|gb|ADQ81123.1| hypothetical protein Palpr_2995 [Paludibacter propionicigenes
WB4]
Length=168
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/157 (29%), Positives = 74/157 (48%), Gaps = 5/157 (3%)
Query 2 LYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWAD 61
LY D + ++ + + PA+ W R+ D G I V+ E+ + +D+ +W
Sbjct 7 LYCLDANVLIQAWQKYYSPALCPDYWDRLNDLGEQGLIFIPAAVRDEITKTEDELSQWLK 66
Query 62 GQTGLFCPLDEQIQQAARHILR---LHPNMVRQGGRRSAADPFVIALAMVNNATVVTQE- 117
+ E + R I + +H +V RS ADP+VIA AM +A VVT+E
Sbjct 67 TSKIQIRSITEPVTYYLRQIYQANPIHKGLVDNVKGRSLADPWVIAHAMSESAVVVTKEE 126
Query 118 -TASGNIEKPRIPDVCDALGVPWLTLMGYIEAQGWTF 153
+ N + +IP+VCD +G+ W+ +I G F
Sbjct 127 KITAANSNRIKIPNVCDNMGIRWMNDFEFIAEVGIRF 163
>gi|206564110|ref|YP_002234873.1| hypothetical protein BCAM2274a [Burkholderia cenocepacia J2315]
gi|198040150|emb|CAR56133.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
Length=165
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/168 (34%), Positives = 81/168 (49%), Gaps = 18/168 (10%)
Query 1 VLYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARR--DDDAKR 58
++Y FDTS+I + + F P VFRS+W +E + ++ S EV E+ R+ D
Sbjct 1 MIYVFDTSSIRSLQH--FYPRVFRSIWQGIEKLVGQRRLISTREVLNEIERQAVSADVLT 58
Query 59 WADGQTGLF-CPLDEQIQQAA-----RHILRLHPNMVRQGGRRSAADPFVIALAMVNNAT 112
W G LF P ++++ A +H L R G ADPFVIA A V T
Sbjct 59 WVKGNRSLFTTPSADELRFVASILQIKHFQALIGQQQRLKG-TPVADPFVIACAKVCLGT 117
Query 113 VVTQE----TASGNIEKP---RIPDVCDALGVPWLTLMGYIEAQGWTF 153
VVT+E G + KP +IP+VC +P + L ++ Q W F
Sbjct 118 VVTEEGWLHAGDGLVPKPHAAKIPNVCAHFEIPCIDLEEFMHQQDWQF 165
>gi|91214771|ref|ZP_01251744.1| hypothetical protein P700755_17939 [Psychroflexus torquis ATCC
700755]
gi|91187198|gb|EAS73568.1| hypothetical protein P700755_17939 [Psychroflexus torquis ATCC
700755]
Length=169
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/151 (30%), Positives = 69/151 (46%), Gaps = 5/151 (3%)
Query 1 VLYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWA 60
V+Y D + ++ + + P + S W + D G I + V E+ + +D+ W
Sbjct 7 VVYCIDANILIQAWQKYYSPEICPSYWEVLNDLGKKGVIFIPELVYEEIEKGEDNLFEWL 66
Query 61 DGQTGLFCPLDEQIQQAARHILRLHPN---MVRQGGRRSAADPFVIALAMVNNATVVTQE 117
+D ++ + I +PN +V G S ADP+VIA AM NA VVT+E
Sbjct 67 KNSDIPIKKIDGEVTNCLKEIYTSNPNHKYLVSSNGIHSKADPWVIAHAMKENAVVVTKE 126
Query 118 TAS--GNIEKPRIPDVCDALGVPWLTLMGYI 146
T K +IP VCD + V W+ +I
Sbjct 127 TKDYFKKQTKIKIPHVCDNMDVKWIDDFEFI 157
>gi|254427245|ref|ZP_05040952.1| hypothetical protein ADG881_475 [Alcanivorax sp. DG881]
gi|196193414|gb|EDX88373.1| hypothetical protein ADG881_475 [Alcanivorax sp. DG881]
Length=162
Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/158 (30%), Positives = 77/158 (49%), Gaps = 10/158 (6%)
Query 2 LYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWAD 61
+Y D + + + ++ + + W ++ + + S+ V ELA DD+ W
Sbjct 1 MYLLDANTYIQAKNLHYQMSFCPAYWSWLDQQYALSSLASISTVYDELADGDDELSEWVK 60
Query 62 GQTGLFCPL-DEQIQQAARHILRLHPNMVRQGGRRSA-----ADPFVIALAMVNNATVVT 115
+ F P+ D+ Q+ I + +M + A ADP++IA+A VN TVVT
Sbjct 61 DRQAHFLPVSDDATQEKFAEIAQFVDDMPVKKPEFVAEFLAKADPWLIAVAAVNGGTVVT 120
Query 116 QET-ASGNIEKPRIPDVCDALGVPWLT---LMGYIEAQ 149
ET N K +IP+VC+A VP++T L+ +EAQ
Sbjct 121 HETPVPDNSTKVKIPNVCEAFDVPYITTFQLLNRLEAQ 158
>gi|15837099|ref|NP_297787.1| hypothetical protein XF0497 [Xylella fastidiosa 9a5c]
gi|9105348|gb|AAF83307.1|AE003898_19 conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length=155
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 70/160 (44%), Gaps = 13/160 (8%)
Query 2 LYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDA-KRWA 60
+Y DT+ I N ++ +R F SLW + ++ +I S EV REL A WA
Sbjct 1 MYVLDTNVISNLHKNYYRKR-FVSLWKAFDQLVADDKITSTLEVYRELHEGVLGADNEWA 59
Query 61 DGQTGLF-------CPLDEQIQQAARHILRLHPNMVRQGGRRSAADPFVIALAMVNNATV 113
LF C +I + +GG AD F+ A A TV
Sbjct 60 KVNKNLFTTPSAEECAFVTEIYSVPHFQNNIETQKFLKGGLN--ADAFITARAYAIKGTV 117
Query 114 VTQETASGNIEKPRIPDVCDALGVPWLTLMGYIEAQGWTF 153
VT E N +IP++C+ +P L L G++E++GW F
Sbjct 118 VTMERLKPN--SVKIPNICEHFKIPCLDLEGFMESEGWEF 155
>gi|307299104|ref|ZP_07578906.1| conserved hypothetical protein [Thermotogales bacterium MesG1.Ag.4.2]
gi|306915529|gb|EFN45914.1| conserved hypothetical protein [Thermotogales bacterium MesG1.Ag.4.2]
Length=162
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/153 (28%), Positives = 70/153 (46%), Gaps = 1/153 (0%)
Query 2 LYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWAD 61
+Y DTS+IL+ + + VF +LW +V D I+ ++ + EV +E+ D+ +WA
Sbjct 10 VYVIDTSSILDWLKRYYSSDVFPALWDKVHDLIAEERLIAPYEVYKEIQVGGDEIAKWAS 69
Query 62 GQTGLFC-PLDEQIQQAARHILRLHPNMVRQGGRRSAADPFVIALAMVNNATVVTQETAS 120
+F P + + I ++ ADP+V+A+A A V+T E A
Sbjct 70 KHEEMFIEPSNSEQSFVGDMISNSKVTTPKKTKSGLWADPWVVAMAKEKEAIVITGEQAR 129
Query 121 GNIEKPRIPDVCDALGVPWLTLMGYIEAQGWTF 153
RIPDVC + T + + + W F
Sbjct 130 NVFPASRIPDVCKLYKIRCGTFLELMRLEKWVF 162
>gi|229588242|ref|YP_002870361.1| hypothetical protein PFLU0694 [Pseudomonas fluorescens SBW25]
gi|229360108|emb|CAY46962.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length=165
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/157 (31%), Positives = 77/157 (50%), Gaps = 13/157 (8%)
Query 5 FDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWADGQT 64
D++ ++ + + V W + A ++ S+ V+ ELA+ +DD +W G T
Sbjct 5 LDSNTLIEAKNRYYAMTVCPGYWAWILQQHQALEVASIVPVRDELAKGNDDLTQWVKGNT 64
Query 65 GLFCPLDEQIQQAA-----RHILRLHPNMVRQGGRR---SAADPFVIALAMVNNATVVTQ 116
LF ++ QAA I P M + G ADP++IA AMV A VVT
Sbjct 65 HLFEDASDEPTQAAFGQIVAKIAEQVPAM-KAGAFEEFLEGADPWLIAKAMVTGAVVVTH 123
Query 117 ETASGNIE-KPRIPDVCDALGVPWLT---LMGYIEAQ 149
E + +I+ K IP+VC GVP++ L+G ++A+
Sbjct 124 EVYNPDIKRKFTIPNVCSLFGVPYMNTFELLGKLDAR 160
>gi|319427794|gb|ADV55868.1| conserved hypothetical protein [Shewanella putrefaciens 200]
Length=164
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/146 (29%), Positives = 69/146 (48%), Gaps = 7/146 (4%)
Query 3 YSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWADG 62
Y D++ + + + A+ + W + A GQ+ S++ V+ EL DD W
Sbjct 3 YLLDSNTFIEAKGRYYGMAICPAYWAWLLKAYEKGQVCSIEFVKEELIHYGDDLSDWVKA 62
Query 63 QTGL-FCPLDEQIQQAARHILRLHPNMVRQGGRR-----SAADPFVIALAMVNNATVVTQ 116
+ F D Q+A ++ + +M + S ADP++IA AMV AT+VT
Sbjct 63 HKHIFFSESDAATQKAFVEVVNIVYSMSQMNAGTHEEFLSGADPWLIAKAMVLGATIVTH 122
Query 117 ETASGNIEKP-RIPDVCDALGVPWLT 141
E I+K IP++C+ +GV +L
Sbjct 123 ERYDVMIKKKILIPNICERVGVKYLN 148
>gi|86143906|ref|ZP_01062274.1| PIN domain protein [Leeuwenhoekiella blandensis MED217]
gi|85829613|gb|EAQ48076.1| PIN domain protein [Leeuwenhoekiella blandensis MED217]
Length=166
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/164 (27%), Positives = 75/164 (46%), Gaps = 12/164 (7%)
Query 2 LYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRW-- 59
+Y D++ +N R + V S W +V++ G I S+D+V+ E+ R+DD + W
Sbjct 3 VYVVDSNFFINAHRAYYPLDVAHSFWNKVKELAEKGSIISIDKVKNEIFDRNDDLEAWCS 62
Query 60 ADGQTGLFCPLDEQIQQ-------AARHILRLHPNMVRQGGRRSAADPFVIALAMVN--N 110
A+ F D I + A H PN + + AD F++A ++ + N
Sbjct 63 ANLPEDFFKSTDSVILEYSQVSNWAVSHSSHYLPNALNEFLGADEADAFLVAFSLADHSN 122
Query 111 ATVVTQETASGN-IEKPRIPDVCDALGVPWLTLMGYIEAQGWTF 153
+VTQE + K +IP+ C+ V ++ M + G TF
Sbjct 123 RIIVTQEVSQPQRRNKIKIPEPCNHFNVRYMPTMDMLRDLGETF 166
>gi|260219902|emb|CBA26899.1| hypothetical protein Csp_G38940 [Curvibacter putative symbiont
of Hydra magnipapillata]
Length=166
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/159 (28%), Positives = 76/159 (48%), Gaps = 12/159 (7%)
Query 2 LYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWAD 61
+Y D++ ++ + + + W V + G + S+D V EL R +D+ +WA
Sbjct 1 MYLLDSNTLIEAKNRYYGMTICPGYWAWVLRSHVQGVVASIDTVGDELKRGNDELAQWAK 60
Query 62 GQTGLFCPLDEQIQQAARHILRLH----PNMVRQGGRR---SAADPFVIALAM-VNNATV 113
LF P+ + Q+A + H N ++ G S ADP++IA AM + + V
Sbjct 61 QHAALFLPVSDDATQSAFAQVAEHVASQTNQMKPGALEEFLSGADPWLIAKAMTLAGSVV 120
Query 114 VTQETASGNI-EKPRIPDVCDALGVPWL---TLMGYIEA 148
VT E + + K IP+VC GV W+ ++G+ +A
Sbjct 121 VTHEQLNLQMRRKFSIPNVCQHFGVQWMDTFAVLGHTQA 159
>gi|21232397|ref|NP_638314.1| hypothetical protein XCC2966 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|21114175|gb|AAM42238.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris
str. ATCC 33913]
Length=155
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/163 (31%), Positives = 69/163 (43%), Gaps = 19/163 (11%)
Query 2 LYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDA--KRW 59
+Y FDT R + PAVF S W ++ + G + S EV+REL + +A W
Sbjct 1 MYVFDTGPF--SRLKHYYPAVFHSFWAHMDALVHGGYLLSTREVKRELDNGEPNAVVSAW 58
Query 60 ADGQTGLFCPLDEQIQQAARHILRLHPNMVRQGGRRS------AADPFVIALAMVNNATV 113
GLF Q IL + P+ G R ADPFVIA A V V
Sbjct 59 IGQHAGLFSMPSAGEMQLVAQILAI-PHFQSIIGERQRLKGTPVADPFVIAAAQVRGFAV 117
Query 114 VTQETASGNIEKP---RIPDVCDALGVPWLTLMGYIEAQGWTF 153
VT E + KP ++P +C V + L ++ Q T+
Sbjct 118 VTTE-----VYKPQAAKVPIICQHFNVRCIDLEQFMAEQKMTY 155
>gi|170783538|ref|YP_001742031.1| hypothetical protein pSI-1_93 [Arthrobacter sp. AK-1]
gi|150035025|gb|ABR67036.1| hypothetical protein [Arthrobacter sp. AK-1]
Length=157
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/154 (30%), Positives = 67/154 (44%), Gaps = 6/154 (3%)
Query 3 YSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWADG 62
Y FD + I++ R R V+ WG +E I G+ +V REL R DD WA
Sbjct 6 YCFDANIIIDLNRHSPRD-VWEVTWGALEALIEDGRAVMPRDVYRELERWDDACAPWAKS 64
Query 63 QTGLFCPLDEQIQQAARHILRLHPNMVRQGGRRSAADPFVIALAMVNNATVVTQETASG- 121
+ + +P V G+++AADPFVIA A + ++VT ETA G
Sbjct 65 VADFVVETTSEELAVVAELSARYPEWV--SGQQNAADPFVIAAAHCRSLSIVTHETAKGA 122
Query 122 --NIEKPRIPDVCDALGVPWLTLMGYIEAQGWTF 153
+IP+ GV + + +GW F
Sbjct 123 GFTQANMKIPNAAAGYGVECMRFVDVARREGWIF 156
>gi|344045914|gb|EGV41583.1| hypothetical protein CgS9114_02203 [Corynebacterium glutamicum
S9114]
Length=160
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/146 (29%), Positives = 66/146 (46%), Gaps = 11/146 (7%)
Query 2 LYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWAD 61
+Y D + + R + + W ++D+ +AG ++S+ +V E++ +DD WA
Sbjct 1 MYLLDANIFIQSNRAHYGLDFVPAFWDWLDDSYNAGLLKSIKKVGDEISAGNDDLTTWAA 60
Query 62 GQTGLFCPLDEQIQQAARHILRL-------HPNMVRQGGRRSAADPFVIALAMVNNATVV 114
+ LF LD H+ +L H S AD ++A A +N TVV
Sbjct 61 NRPYLFATLDS---SCGPHLAKLSQWATTHHFTQAAINDFLSVADYQLVAYARAHNMTVV 117
Query 115 TQETASGN-IEKPRIPDVCDALGVPW 139
T E A K +IPD C A+GV W
Sbjct 118 TMEKADPKRKNKIKIPDACVAMGVKW 143
>gi|189501386|ref|YP_001960856.1| PIN domain-containing protein [Chlorobium phaeobacteroides BS1]
gi|189496827|gb|ACE05375.1| PIN domain protein [Chlorobium phaeobacteroides BS1]
Length=168
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/148 (28%), Positives = 69/148 (47%), Gaps = 10/148 (6%)
Query 2 LYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWAD 61
L+ D++ ++ R + + W ++ G++RS+D V E+ R +D+ W +
Sbjct 6 LFLLDSNVLMTAARHYYAFDIAPGFWSALDRKAGDGELRSIDRVYAEINRGNDELVSWVN 65
Query 62 GQTG--LFCPLDEQIQQAARHILRL------HPNMVRQG-GRRSAADPFVIALAMVNNAT 112
F ++ Q I+ + + V+Q R ADP+++A A VN
Sbjct 66 HIFADYFFTTETPEVIQKYTEIIFWSQKQDGYSSAVKQDFARYDHADPWLVAYAFVNECA 125
Query 113 VVTQETAS-GNIEKPRIPDVCDALGVPW 139
VVT E+A+ +K IP +CDA VPW
Sbjct 126 VVTLESANQATKKKIPIPIICDAFDVPW 153
>gi|336314469|ref|ZP_08569387.1| hypothetical protein Rhein_0749 [Rheinheimera sp. A13L]
gi|335881250|gb|EGM79131.1| hypothetical protein Rhein_0749 [Rheinheimera sp. A13L]
Length=162
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/152 (24%), Positives = 69/152 (46%), Gaps = 6/152 (3%)
Query 1 VLYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWA 60
++Y D + + + + + W ++ AG S+D + REL +D+ W
Sbjct 1 MIYLLDANTYIEAKNTYYSMDFCPAYWSWLDQQFVAGVAGSIDMIGRELKDGNDELATWV 60
Query 61 DGQTGLFCPLDEQIQQAA-----RHILRLHPNMVRQGGRRSAADPFVIALAMVNNATVVT 115
++G F D+ Q A +++ N + + ADP++IA AM A VVT
Sbjct 61 KARSGQFIANDDDATQTAFVQIIEYVMSQSFNPANRDNFLAKADPWLIAKAMSTGAVVVT 120
Query 116 QETA-SGNIEKPRIPDVCDALGVPWLTLMGYI 146
E++ S +K ++P++C GV + ++
Sbjct 121 HESSVSEATKKVKVPNICKQFGVKCINTFEFL 152
>gi|119357306|ref|YP_911950.1| PilT domain-containing protein [Chlorobium phaeobacteroides DSM
266]
gi|119354655|gb|ABL65526.1| PIN domain protein [Chlorobium phaeobacteroides DSM 266]
Length=168
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/147 (27%), Positives = 69/147 (47%), Gaps = 10/147 (6%)
Query 3 YSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWADG 62
+ D++ ++ R + + W ++ G +RS+D V E+ R +D+ W +
Sbjct 7 FLLDSNVLMTAARQYYAFDIAPGFWSALDRKAGDGDLRSIDRVHAEINRGNDELVSWVNH 66
Query 63 QTG--LFCPLDEQIQQAARHILRL------HPNMVRQG-GRRSAADPFVIALAMVNNATV 113
F ++ Q I+ + + V+Q R ADP+++A A++N V
Sbjct 67 TFAHYFFETGTPEVLQKYIEIITWSQEQNGYTSAVKQDFARYEHADPWLVAYALINRCVV 126
Query 114 VTQETAS-GNIEKPRIPDVCDALGVPW 139
VT E+A+ +K IP +CDA GVPW
Sbjct 127 VTLESANPATKKKIPIPIICDAFGVPW 153
>gi|332665217|ref|YP_004448005.1| hypothetical protein Halhy_3273 [Haliscomenobacter hydrossis
DSM 1100]
gi|332334031|gb|AEE51132.1| hypothetical protein Halhy_3273 [Haliscomenobacter hydrossis
DSM 1100]
Length=169
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (44%), Gaps = 5/156 (3%)
Query 3 YSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWADG 62
Y D + ++ + + P + W + G I V E+ + +DD +W
Sbjct 8 YCLDANVLIQAWQKYYSPRLCPGYWDNLNLLGQRGLIFIPKAVYDEIIKTEDDLSKWLAN 67
Query 63 QTGLFCPLDEQIQQAARHIL---RLHPNMVRQGGRRSAADPFVIALAMVNNATVVTQET- 118
+D ++ + + LH +V RS ADP+++A AM A VVT+E
Sbjct 68 SDIPILQIDGEVTRCLSTMYAENELHKYLVDNKKNRSLADPWIVAHAMKEQAVVVTKEER 127
Query 119 -ASGNIEKPRIPDVCDALGVPWLTLMGYIEAQGWTF 153
+++ RIP+VCD +G+ + +IE G F
Sbjct 128 PLVPSVKTIRIPNVCDNMGIRCINDFQFIEEIGLRF 163
>gi|227356911|ref|ZP_03841290.1| PilT domain protein [Proteus mirabilis ATCC 29906]
gi|227162981|gb|EEI47926.1| PilT domain protein [Proteus mirabilis ATCC 29906]
Length=169
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/146 (29%), Positives = 64/146 (44%), Gaps = 11/146 (7%)
Query 3 YSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWADG 62
Y D + + + D + + W + GQ+ S+ V EL +RDD+ W+
Sbjct 3 YLIDANIFIQAQNDYYCFDLCPGFWEFMGSKFIDGQLISIRNVFDELQKRDDEICSWSKN 62
Query 63 QTGLFCPLDEQIQQA-----ARHILR----LHPNMVRQ-GGRRSAADPFVIALAMVNNAT 112
F +D+Q Q A ++ + H N + S ADP++IA A N+
Sbjct 63 IRHCFQSIDDQETQVHFRAIANYVQKEYTPRHKNSLPHIQNFLSVADPWIIAKAKATNSI 122
Query 113 VVTQETASGNIE-KPRIPDVCDALGV 137
VVT E N KP+IPD+CD V
Sbjct 123 VVTHEIRDKNNSCKPKIPDICDYFNV 148
>gi|189347945|ref|YP_001944474.1| PIN domain-containing protein [Chlorobium limicola DSM 245]
gi|189342092|gb|ACD91495.1| PIN domain protein [Chlorobium limicola DSM 245]
Length=168
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/147 (28%), Positives = 71/147 (49%), Gaps = 10/147 (6%)
Query 3 YSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWADG 62
+ D++ ++ R + + W ++ G +RS+D V E+ R +D+ W +
Sbjct 7 FLLDSNVLMTAARQYYAFDIAPGFWLALDRKAGDGDLRSIDRVHAEINRGNDELVSWVNH 66
Query 63 -------QTGLFCPLDEQIQQAA-RHILRLHPNMVRQG-GRRSAADPFVIALAMVNNATV 113
+TG L++ I+ + + V+Q R ADP+++A A+VN V
Sbjct 67 TFAQYFFETGTPEVLEKYIEIITWSQEQNGYTSAVKQDFARYEHADPWLVAYALVNRCVV 126
Query 114 VTQETAS-GNIEKPRIPDVCDALGVPW 139
VT E+A+ +K IP +C+A GVPW
Sbjct 127 VTLESANPATKKKIPIPIICEAFGVPW 153
>gi|227820710|ref|YP_002824680.1| hypothetical protein NGR_c01240 [Sinorhizobium fredii NGR234]
gi|227339709|gb|ACP23927.1| conserved hypothetical protein [Sinorhizobium fredii NGR234]
Length=163
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/161 (33%), Positives = 77/161 (48%), Gaps = 16/161 (9%)
Query 1 VLYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQREL-ARRDDDAKRW 59
++Y DTS++ R + +F + W + + +G + SV EV REL A + + W
Sbjct 1 MIYIVDTSSLRELER--YYNDIFPTFWKLFQAEVDSGSVVSVREVLRELEACPETNVIAW 58
Query 60 ADGQTGLFCP-------LDEQIQQAARHILRLHPNMVRQGGRRSAADPFVIALAMVNNAT 112
A +G+F P QI A H +L + + G+ ADPF+IA A V + T
Sbjct 59 AKHNSGIFKPPAPAEAAFVGQIF-ALPHFQQLISSKAQMTGQ-PVADPFLIAAAKVCSGT 116
Query 113 VVTQETASGNIEKPRIPDVCDALGVPWLTLMGYIEAQGWTF 153
VVTQE N K IP+VC+ V G++E Q F
Sbjct 117 VVTQERFKPNSAK--IPNVCERHRV--HDFRGFLEGQALEF 153
>gi|251772916|gb|EES53475.1| conserved hypothetical protein [Leptospirillum ferrodiazotrophum]
Length=164
Score = 57.4 bits (137), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/145 (27%), Positives = 69/145 (48%), Gaps = 7/145 (4%)
Query 3 YSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRW--A 60
Y D + + + + + W + + S GQ+ S+D+V E+ D+ W +
Sbjct 3 YLLDANVFIQAKNLHYGLDFCPAFWDWLIEQKSLGQVFSIDKVADEIEAGSDELTDWVHS 62
Query 61 DGQTGLFCPLDEQIQ----QAARHILRLHPNMVRQGGRRSAADPFVIALAMVNNATVVTQ 116
+GQ GLF D Q+ + ++ ++ H V AD ++IA A+ VVT
Sbjct 63 NGQ-GLFRATDAQVAAQFGRVSQWVMSQHYEAVAINTFMQIADYYLIAHALAGAHVVVTH 121
Query 117 ETASGNIEKPRIPDVCDALGVPWLT 141
E S +I++ +IP+VC L + ++T
Sbjct 122 EVPSNSIKRIKIPNVCGGLSIRFMT 146
>gi|226226350|ref|YP_002760456.1| hypothetical protein GAU_0944 [Gemmatimonas aurantiaca T-27]
gi|226089541|dbj|BAH37986.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length=162
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/140 (28%), Positives = 62/140 (45%), Gaps = 4/140 (2%)
Query 3 YSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWADG 62
Y D + ++ + + + W ++ +AG I S ++ EL DD WA
Sbjct 3 YILDANVLIEAKNRYYGFDICPGFWNWLDQQFAAGTIVSTVAIRDELLEHGDDLTEWAKS 62
Query 63 QTGLFCPLDE----QIQQAARHILRLHPNMVRQGGRRSAADPFVIALAMVNNATVVTQET 118
++ F LD +Q A + S+AD +IA AM N T+VT E
Sbjct 63 RSDFFPVLDADSLPHLQTLAVWVRAQQYRAAAVTEFLSSADYQLIATAMGNGYTMVTHEV 122
Query 119 ASGNIEKPRIPDVCDALGVP 138
S ++++ +IP+ C A GVP
Sbjct 123 PSDSVKRVKIPEPCIAHGVP 142
>gi|288957072|ref|YP_003447413.1| hypothetical protein AZL_002310 [Azospirillum sp. B510]
gi|288909380|dbj|BAI70869.1| hypothetical protein AZL_002310 [Azospirillum sp. B510]
Length=166
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/166 (27%), Positives = 71/166 (43%), Gaps = 18/166 (10%)
Query 1 VLYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWA 60
+Y D+ + + + + W ++ A+ +RSV +V EL +D+ +W
Sbjct 2 TMYLLDSDTFIQAKNLYYGFDICPGYWEWMDGAVDGCAVRSVSKVYDELVAGNDELAQWI 61
Query 61 DGQT--GLFCPL-DEQIQQAARHILRLHPNMVRQGGRR---------SAADPFVIALAMV 108
G+ G F P+ D Q A R I QGG + ADP+++A A V
Sbjct 62 KGRKGDGRFLPITDPATQNAFREI-----AAAVQGGDYQPSAKAQFLAGADPWLVAKARV 116
Query 109 NNATVVTQETASGNIE-KPRIPDVCDALGVPWLTLMGYIEAQGWTF 153
ATVVT E + + +P++C A GVPW+ + F
Sbjct 117 LGATVVTMERPEPTAKRRVPLPNMCIAFGVPWMDTFALLRQHAAAF 162
>gi|302390347|ref|YP_003826168.1| PilT domain-containing protein [Thermosediminibacter oceani DSM
16646]
gi|302200975|gb|ADL08545.1| PilT domain-containing protein [Thermosediminibacter oceani DSM
16646]
Length=166
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/146 (26%), Positives = 70/146 (48%), Gaps = 8/146 (5%)
Query 2 LYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWAD 61
+Y D + ++ R + + + W + +G++ ++D+V +E+ R DD +W
Sbjct 6 VYVLDANIFIHAARFYYAFDIAPAFWNALVTHAQSGRVITIDQVMKEIERGKDDLAKWIK 65
Query 62 GQTGLFC-PLDEQ-IQQAARHILRL--HPNMVRQGGRR---SAADPFVIALAMVNNATVV 114
+C P E + +A R I++ + N + ++ + AD ++IA A VV
Sbjct 66 NTFQTWCKPTTETDVIEAYRDIIKWVSNQNQFYEEAKKEFANVADGWLIAYAKAKGFVVV 125
Query 115 TQET-ASGNIEKPRIPDVCDALGVPW 139
T E S K +IP+VC+A VP+
Sbjct 126 THEQLKSEKKNKVQIPNVCNAFNVPY 151
>gi|170782488|ref|YP_001710821.1| hypothetical protein CMS_2134 [Clavibacter michiganensis subsp.
sepedonicus]
gi|169157057|emb|CAQ02230.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
sepedonicus]
Length=162
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/161 (28%), Positives = 70/161 (44%), Gaps = 11/161 (6%)
Query 1 VLYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWA 60
++Y D + + R + + W +E AGQ+ S+ ++ E+A +DD WA
Sbjct 1 MMYVLDANVFIQSHRAHYGLDFVPAFWHWLERTFLAGQLVSIIPIRDEIAAGEDDLSEWA 60
Query 61 DGQTGLFCPLDEQIQQAARHILRLHPNMVRQGGRRSAADPF-------VIALAMVNNATV 113
LF +D Q A + L ++ G +A+ F ++A A + TV
Sbjct 61 KEHPRLFVAMD---QACAPSLGALAGWVLGAGYTDAASQEFLSVADYQLVAFAHAHQLTV 117
Query 114 VTQETASGN-IEKPRIPDVCDALGVPWLTLMGYIEAQGWTF 153
VT E + N K +IPD C ALGV T + +G F
Sbjct 118 VTMERSEPNRRSKVKIPDACAALGVDCTTPFDMLRHEGACF 158
>gi|289706684|ref|ZP_06503032.1| conserved hypothetical protein [Micrococcus luteus SK58]
gi|289556604|gb|EFD49947.1| conserved hypothetical protein [Micrococcus luteus SK58]
Length=167
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/145 (28%), Positives = 66/145 (46%), Gaps = 12/145 (8%)
Query 1 VLYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWA 60
+++ D + + + + + W +E A +AG + SV+ V++EL R D+ WA
Sbjct 1 MMFLLDANTFITPKNSYYGFDLAPGFWTWLERAHAAGWVASVEAVRQELCRGGDELATWA 60
Query 61 DGQTGLFCPLDEQIQQAARHILRLHPNMVRQGGRRSA---------ADPFVIALAMVNNA 111
LF PL ++ Q + + + RQ + A AD ++A A +A
Sbjct 61 SNHPQLFLPLTSEVPQRIGELAQW--TLTRQPAYQQAAQDEFLDDSADLLLVAQAACMDA 118
Query 112 TVVTQETASGNIEK-PRIPDVCDAL 135
TVVT E + K +IPD C AL
Sbjct 119 TVVTFEVPAPQARKRVKIPDACAAL 143
>gi|78043888|ref|YP_359164.1| PilT domain-containing protein [Carboxydothermus hydrogenoformans
Z-2901]
gi|77996003|gb|ABB14902.1| PIN domain protein [Carboxydothermus hydrogenoformans Z-2901]
Length=166
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/146 (27%), Positives = 65/146 (45%), Gaps = 8/146 (5%)
Query 3 YSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWADG 62
Y DT+ + R + + + W + D G + S+D V+ E+ R D+ +W
Sbjct 7 YLLDTNVFVEAARRYYAFDLVPAFWRILIDHAKNGDVLSIDWVKDEIVRNQDELSKWIKT 66
Query 63 QTGLFCPLDEQ--IQQAARHILRL---HPNMVRQGGRR--SAADPFVIALAMVNNATVVT 115
+C Q + A R I+ + + + S AD ++IA A V +VT
Sbjct 67 IFHNWCNSTNQPDVINAYREIMEWVNSNDQFLEEAKAEFASGADGWLIAYAKVKGCILVT 126
Query 116 QETASGNI-EKPRIPDVCDALGVPWL 140
E + NI +K IP+VC A VP++
Sbjct 127 HEKYNPNIRKKVPIPNVCKAFNVPYI 152
>gi|284040999|ref|YP_003390929.1| hypothetical protein Slin_6170 [Spirosoma linguale DSM 74]
gi|283820292|gb|ADB42130.1| conserved hypothetical protein [Spirosoma linguale DSM 74]
Length=142
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/118 (29%), Positives = 49/118 (42%), Gaps = 3/118 (2%)
Query 3 YSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWADG 62
Y D + ++ + P + S W + I EV EL + DDD +WA
Sbjct 6 YCLDANVLIVAWHTYYAPTICLSYWDLLAKLGRDNLIFLPSEVLAELEKTDDDLLKWAKS 65
Query 63 QTGLFCPLDEQIQQAARHILR---LHPNMVRQGGRRSAADPFVIALAMVNNATVVTQE 117
D + + I +H ++ RS ADP+VIA AM NA VVT+E
Sbjct 66 SKIPVEKTDTSVISCLKDIYNNNPIHTKLIDSAKGRSLADPWVIAHAMRQNACVVTKE 123
>gi|261419670|ref|YP_003253352.1| PilT domain-containing protein [Geobacillus sp. Y412MC61]
gi|319766488|ref|YP_004131989.1| PilT domain-containing protein [Geobacillus sp. Y412MC52]
gi|261376127|gb|ACX78870.1| PilT domain-containing protein [Geobacillus sp. Y412MC61]
gi|317111354|gb|ADU93846.1| PilT domain-containing protein [Geobacillus sp. Y412MC52]
Length=167
Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/151 (29%), Positives = 70/151 (47%), Gaps = 22/151 (14%)
Query 6 DTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELA--RRDDDAKRWADGQ 63
DTS + + + + S W + G I S+D V++E+ ++D+ WA+
Sbjct 10 DTSIFIEAYKRYYSFDIAPSFWDALLQHAENGNIISIDRVKQEINSFHKNDELSEWANHY 69
Query 64 TGLFCPLDEQIQQAARHILRLHPNM----VRQG-----GRR---SAADPFVIALAMVNNA 111
+ ++I+ +LR + + V+QG +R SAAD ++IA A N
Sbjct 70 FARWFESTDKIE-----VLRTYQEIITWAVQQGQYFEAAKREFASAADSWLIAFAKTYNF 124
Query 112 TVVTQETASGNIEKPR--IPDVCDALGVPWL 140
VVT E N K R IP+VC A VP++
Sbjct 125 IVVTHEQFHPN-SKSRIFIPNVCHAFNVPYV 154
>gi|333976177|gb|EGL77049.1| PIN domain protein [Veillonella parvula ACS-068-V-Sch12]
Length=159
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/150 (25%), Positives = 68/150 (46%), Gaps = 9/150 (6%)
Query 2 LYSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWAD 61
+Y D++ ++ + + + S W + S G I ++D ++ E+ +D+ W D
Sbjct 1 MYVLDSNTFIDAKNRYYGFDIVPSFWNELISH-SRGNILTIDHIKNEIMSGNDELSIWFD 59
Query 62 GQTGLFCPL--DEQIQQA----ARHILRLHPNMVRQGGRRSA-ADPFVIALAMVNNATVV 114
F D +IQ A +++ + R A ADP++IA A V+ VV
Sbjct 60 THYLRFTEATNDVEIQNTYADIAEYVMLNQQYKDAEKHRFLAKADPWLIAYASVHRGVVV 119
Query 115 TQETASG-NIEKPRIPDVCDALGVPWLTLM 143
T E +G K +IPD+C+ V ++ +
Sbjct 120 THEVLAGPKTTKVKIPDICEYFDVSYVNVF 149
>gi|292669194|ref|ZP_06602620.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
gi|292649035|gb|EFF67007.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
Length=168
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/167 (22%), Positives = 74/167 (45%), Gaps = 23/167 (13%)
Query 3 YSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWADG 62
Y D ++++ R + S W ++ IS+ +I +D+V+ EL + D+ +W +
Sbjct 5 YLIDANSLIQPARAYYPFDFAPSFWQQLSPRISSAKIVILDKVRDELLKGTDELAKWINN 64
Query 63 QTGLFCPLDEQIQQAARHILRLHPNM--------------VRQGGRRSAADPFVIALAMV 108
P + + IL ++ N+ +R + ADP++IA A
Sbjct 65 -----LPTEYILSTRDMQILNIYGNILTFIQQSDQYSDAALRHWSQLDVADPWLIAAAKA 119
Query 109 NNATVVTQETASGNI----EKPRIPDVCDALGVPWLTLMGYIEAQGW 151
N T+++ E ++G I P++PD+ VP+ +L + + +
Sbjct 120 YNYTILSFEQSAGRITTRSNNPKLPDIARHFQVPYTSLFDMMRQENF 166
>gi|50086396|ref|YP_047906.1| hypothetical protein ACIAD3428 [Acinetobacter sp. ADP1]
gi|49532372|emb|CAG70084.1| conserved hypothetical protein [Acinetobacter sp. ADP1]
Length=170
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/164 (27%), Positives = 74/164 (46%), Gaps = 18/164 (10%)
Query 3 YSFDTSAILNGRRDLFRPAVFRSLWGRVEDAISAGQIRSVDEVQRELARRDDDAKRWADG 62
Y DT+ +N + F S W +++ I++ Q+ D V E +D+ K+W +
Sbjct 6 YLLDTNIYINFYERYYLFDFFPSFWEKIKVTINS-QVVLPDIVVSE-HYQDERFKKWLEE 63
Query 63 Q-TGLFCPL-------DEQIQQAARHILRLHPNMV--RQGGRRSAADPFVIALAMVNNAT 112
TG+ C E IQ A H + + R AD ++IA+A +N
Sbjct 64 NFTGVSCKYKDYVDLWSEVIQHIANHECYSDKALTNDKSWTREKIADGWLIAIAKKDNLV 123
Query 113 VVTQETASGNIEK------PRIPDVCDALGVPWLTLMGYIEAQG 150
+VT ET + N+ K P++PD+ + LGV + + + + G
Sbjct 124 IVTSETKNINLNKNQPTQNPKVPDIANDLGVRCIDMNTFFKEIG 167
Lambda K H
0.323 0.137 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 127769454500
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40