BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2515c Length=415 Score E Sequences producing significant alignments: (Bits) Value gi|15609652|ref|NP_217031.1| hypothetical protein Rv2515c [Mycob... 830 0.0 gi|167966791|ref|ZP_02549068.1| hypothetical protein MtubH3_0146... 828 0.0 gi|254551563|ref|ZP_05142010.1| hypothetical protein Mtube_14080... 818 0.0 gi|340627532|ref|YP_004745984.1| hypothetical protein MCAN_25571... 816 0.0 gi|308371039|ref|ZP_07423638.2| hypothetical protein TMCG_01758 ... 796 0.0 gi|308232159|ref|ZP_07415126.2| hypothetical protein TMAG_02318 ... 781 0.0 gi|254776178|ref|ZP_05217694.1| hypothetical protein MaviaA2_161... 635 3e-180 gi|289444046|ref|ZP_06433790.1| conserved hypothetical protein [... 632 3e-179 gi|289751124|ref|ZP_06510502.1| conserved hypothetical protein [... 542 3e-152 gi|167838345|ref|ZP_02465204.1| hypothetical protein Bpse38_1769... 204 2e-50 gi|295696819|ref|YP_003590057.1| hypothetical protein Btus_2240 ... 199 1e-48 gi|146343187|ref|YP_001208235.1| hypothetical protein BRADO6390 ... 196 9e-48 gi|296132593|ref|YP_003639840.1| protein of unknown function DUF... 189 6e-46 gi|188587122|ref|YP_001918667.1| protein of unknown function DUF... 189 6e-46 gi|188990002|ref|YP_001902012.1| hypothetical protein xccb100_06... 171 2e-40 gi|289570677|ref|ZP_06450904.1| conserved hypothetical protein [... 161 2e-37 gi|21232396|ref|NP_638313.1| hypothetical protein XCC2965 [Xanth... 159 6e-37 gi|330819495|ref|YP_004348357.1| hypothetical protein bgla_2g036... 156 7e-36 gi|134292093|ref|YP_001115829.1| hypothetical protein Bcep1808_3... 155 2e-35 gi|222445169|ref|ZP_03607684.1| hypothetical protein METSMIALI_0... 154 2e-35 gi|307299103|ref|ZP_07578905.1| protein of unknown function DUF9... 153 4e-35 gi|78188288|ref|YP_378626.1| hypothetical protein Cag_0309 [Chlo... 142 1e-31 gi|126436461|ref|YP_001072152.1| hypothetical protein Mjls_3885 ... 141 2e-31 gi|218960562|ref|YP_001740337.1| hypothetical protein CLOAM0221 ... 138 2e-30 gi|166367767|ref|YP_001660040.1| hypothetical protein MAE_50260 ... 137 5e-30 gi|206564111|ref|YP_002234874.1| putative DNA-binding protein [B... 135 2e-29 gi|313205450|ref|YP_004044107.1| hypothetical protein Palpr_2994... 131 3e-28 gi|229588241|ref|YP_002870360.1| hypothetical protein PFLU0693 [... 130 3e-28 gi|227820711|ref|YP_002824681.1| conserved hypothetical protein ... 129 9e-28 gi|213971555|ref|ZP_03399665.1| DNA-binding protein [Pseudomonas... 125 9e-27 gi|284040998|ref|YP_003390928.1| hypothetical protein Slin_6169 ... 125 1e-26 gi|326795085|ref|YP_004312905.1| hypothetical protein Marme_1813... 125 2e-26 gi|289623616|ref|ZP_06456570.1| DNA-binding protein [Pseudomonas... 123 5e-26 gi|15837098|ref|NP_297786.1| hypothetical protein XF0496 [Xylell... 123 5e-26 gi|330987993|gb|EGH86096.1| DNA-binding protein [Pseudomonas syr... 123 7e-26 gi|71733778|ref|YP_277140.1| DNA-binding protein [Pseudomonas sy... 122 8e-26 gi|28867507|ref|NP_790126.1| DNA-binding protein [Pseudomonas sy... 122 9e-26 gi|257482549|ref|ZP_05636590.1| DNA-binding protein [Pseudomonas... 122 1e-25 gi|330881250|gb|EGH15399.1| DNA-binding protein [Pseudomonas syr... 122 1e-25 gi|242398075|ref|YP_002993499.1| hypothetical protein TSIB_0082 ... 121 2e-25 gi|209966401|ref|YP_002299316.1| DNA-binding protein, putative [... 116 6e-24 gi|260219901|emb|CBA26897.1| hypothetical protein Csp_G38930 [Cu... 115 1e-23 gi|332665218|ref|YP_004448006.1| hypothetical protein Halhy_3274... 113 5e-23 gi|83591876|ref|YP_425628.1| hypothetical protein Rru_A0537 [Rho... 112 8e-23 gi|336314470|ref|ZP_08569388.1| Putative Zn peptidase [Rheinheim... 112 1e-22 gi|121610481|ref|YP_998288.1| hypothetical protein Veis_3552 [Ve... 112 1e-22 gi|288560902|ref|YP_003424388.1| hypothetical protein mru_1646 [... 112 1e-22 gi|330957261|gb|EGH57521.1| DNA-binding protein [Pseudomonas syr... 110 3e-22 gi|320161537|ref|YP_004174761.1| hypothetical protein ANT_21350 ... 109 9e-22 gi|333997747|ref|YP_004530359.1| hypothetical protein TREPR_2738... 108 1e-21 >gi|15609652|ref|NP_217031.1| hypothetical protein Rv2515c [Mycobacterium tuberculosis H37Rv] gi|15842046|ref|NP_337083.1| hypothetical protein MT2591 [Mycobacterium tuberculosis CDC1551] gi|31793696|ref|NP_856189.1| hypothetical protein Mb2544c [Mycobacterium bovis AF2122/97] 42 more sequence titles Length=415 Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust. Identities = 414/415 (99%), Positives = 415/415 (100%), Gaps = 0/415 (0%) Query 1 VGIGHPMWVGWCIIIAMRSIPASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVG 60 +GIGHPMWVGWCIIIAMRSIPASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVG Sbjct 1 MGIGHPMWVGWCIIIAMRSIPASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVG 60 Query 61 EVVPTIAQLRKAAEVYKRSLAVFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRA 120 EVVPTIAQLRKAAEVYKRSLAVFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRA Sbjct 61 EVVPTIAQLRKAAEVYKRSLAVFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRA 120 Query 121 HTQRDFALELADAEDREIPGAWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYE 180 HTQRDFALELADAEDREIPGAWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYE Sbjct 121 HTQRDFALELADAEDREIPGAWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYE 180 Query 181 HLNAWVSAIETSGVLVLATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHE 240 HLNAWVSAIETSGVLVLATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHE Sbjct 181 HLNAWVSAIETSGVLVLATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHE 240 Query 241 FVHVVLHTEGLCDVIADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSS 300 FVHVVLHTEGLCDVIADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSS Sbjct 241 FVHVVLHTEGLCDVIADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSS 300 Query 301 WDYESLRPVAAHFGVSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGN 360 WDYESLRPVAAHFGVSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGN Sbjct 301 WDYESLRPVAAHFGVSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGN 360 Query 361 WYRNTVRDLGKGYVRAVTDAHRRRVIDSNTAAIYLDAKVSQIPKLAESAELRSVV 415 WYRNTVRDLGKGYVRAVTDAHRRRVIDSNTAAIYLDAKVSQIPKLAESAELRSVV Sbjct 361 WYRNTVRDLGKGYVRAVTDAHRRRVIDSNTAAIYLDAKVSQIPKLAESAELRSVV 415 >gi|167966791|ref|ZP_02549068.1| hypothetical protein MtubH3_01468 [Mycobacterium tuberculosis H37Ra] Length=415 Score = 828 bits (2140), Expect = 0.0, Method: Compositional matrix adjust. Identities = 413/415 (99%), Positives = 415/415 (100%), Gaps = 0/415 (0%) Query 1 VGIGHPMWVGWCIIIAMRSIPASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVG 60 +GIGHPMWVGWCIIIAMRSIPASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVG Sbjct 1 MGIGHPMWVGWCIIIAMRSIPASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVG 60 Query 61 EVVPTIAQLRKAAEVYKRSLAVFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRA 120 EVVPTIAQLRKAAEVYKRSLAVFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRA Sbjct 61 EVVPTIAQLRKAAEVYKRSLAVFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRA 120 Query 121 HTQRDFALELADAEDREIPGAWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYE 180 HTQRDFALELADAEDREIPGAWRLPLSGDEADADIAARIRKALIEVSPLPIPVASV+PYE Sbjct 121 HTQRDFALELADAEDREIPGAWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVEPYE 180 Query 181 HLNAWVSAIETSGVLVLATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHE 240 HLNAWVSAIETSGVLVLATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHE Sbjct 181 HLNAWVSAIETSGVLVLATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHE 240 Query 241 FVHVVLHTEGLCDVIADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSS 300 FVHVVLHTEGLCDVIADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSS Sbjct 241 FVHVVLHTEGLCDVIADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSS 300 Query 301 WDYESLRPVAAHFGVSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGN 360 WDYESLRPVAAHFGVSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGN Sbjct 301 WDYESLRPVAAHFGVSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGN 360 Query 361 WYRNTVRDLGKGYVRAVTDAHRRRVIDSNTAAIYLDAKVSQIPKLAESAELRSVV 415 WYRNTVRDLGKGYVRAVTDAHRRRVIDSNTAAIYLDAKVSQIPKLAESAELRSVV Sbjct 361 WYRNTVRDLGKGYVRAVTDAHRRRVIDSNTAAIYLDAKVSQIPKLAESAELRSVV 415 >gi|254551563|ref|ZP_05142010.1| hypothetical protein Mtube_14080 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|308405346|ref|ZP_07494314.2| hypothetical protein TMLG_02241 [Mycobacterium tuberculosis SUMu012] gi|308365243|gb|EFP54094.1| hypothetical protein TMLG_02241 [Mycobacterium tuberculosis SUMu012] gi|323718869|gb|EGB28024.1| hypothetical protein TMMG_02523 [Mycobacterium tuberculosis CDC1551A] gi|339295398|gb|AEJ47509.1| hypothetical protein CCDC5079_2319 [Mycobacterium tuberculosis CCDC5079] Length=409 Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/409 (100%), Positives = 409/409 (100%), Gaps = 0/409 (0%) Query 7 MWVGWCIIIAMRSIPASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTI 66 MWVGWCIIIAMRSIPASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTI Sbjct 1 MWVGWCIIIAMRSIPASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTI 60 Query 67 AQLRKAAEVYKRSLAVFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDF 126 AQLRKAAEVYKRSLAVFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDF Sbjct 61 AQLRKAAEVYKRSLAVFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDF 120 Query 127 ALELADAEDREIPGAWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWV 186 ALELADAEDREIPGAWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWV Sbjct 121 ALELADAEDREIPGAWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWV 180 Query 187 SAIETSGVLVLATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVL 246 SAIETSGVLVLATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVL Sbjct 181 SAIETSGVLVLATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVL 240 Query 247 HTEGLCDVIADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESL 306 HTEGLCDVIADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESL Sbjct 241 HTEGLCDVIADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESL 300 Query 307 RPVAAHFGVSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTV 366 RPVAAHFGVSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTV Sbjct 301 RPVAAHFGVSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTV 360 Query 367 RDLGKGYVRAVTDAHRRRVIDSNTAAIYLDAKVSQIPKLAESAELRSVV 415 RDLGKGYVRAVTDAHRRRVIDSNTAAIYLDAKVSQIPKLAESAELRSVV Sbjct 361 RDLGKGYVRAVTDAHRRRVIDSNTAAIYLDAKVSQIPKLAESAELRSVV 409 >gi|340627532|ref|YP_004745984.1| hypothetical protein MCAN_25571 [Mycobacterium canettii CIPT 140010059] gi|340005722|emb|CCC44888.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=415 Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust. Identities = 407/415 (99%), Positives = 408/415 (99%), Gaps = 0/415 (0%) Query 1 VGIGHPMWVGWCIIIAMRSIPASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVG 60 +GIGHPMWVGWCIIIAMRSIPASVESSVLRWARESCGLTE AAARKLGLPDDRVAAWEVG Sbjct 1 MGIGHPMWVGWCIIIAMRSIPASVESSVLRWARESCGLTEAAAARKLGLPDDRVAAWEVG 60 Query 61 EVVPTIAQLRKAAEVYKRSLAVFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRA 120 EVVPTIAQLRKAAEVYKRSLAVFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRA Sbjct 61 EVVPTIAQLRKAAEVYKRSLAVFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRA 120 Query 121 HTQRDFALELADAEDREIPGAWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYE 180 HTQRDFALELAD EDRE P AWRLPLSGDEADADIA RIRKALIEVSPLPIPVASVDPYE Sbjct 121 HTQRDFALELADTEDRETPVAWRLPLSGDEADADIAGRIRKALIEVSPLPIPVASVDPYE 180 Query 181 HLNAWVSAIETSGVLVLATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHE 240 HLNAWVSAIETSGVLVLATRGGKVAI EMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHE Sbjct 181 HLNAWVSAIETSGVLVLATRGGKVAIGEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHE 240 Query 241 FVHVVLHTEGLCDVIADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSS 300 F HVVLHTEGLCDVIADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSS Sbjct 241 FAHVVLHTEGLCDVIADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSS 300 Query 301 WDYESLRPVAAHFGVSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGN 360 WDYESLRPVAAHFGVSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGN Sbjct 301 WDYESLRPVAAHFGVSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGN 360 Query 361 WYRNTVRDLGKGYVRAVTDAHRRRVIDSNTAAIYLDAKVSQIPKLAESAELRSVV 415 WYRNTVRDLGKGYVRAVTDAHRRRVIDSNTAAIYLDAKVSQIPKLAESAELRSVV Sbjct 361 WYRNTVRDLGKGYVRAVTDAHRRRVIDSNTAAIYLDAKVSQIPKLAESAELRSVV 415 >gi|308371039|ref|ZP_07423638.2| hypothetical protein TMCG_01758 [Mycobacterium tuberculosis SUMu003] gi|308375563|ref|ZP_07444355.2| hypothetical protein TMGG_02359 [Mycobacterium tuberculosis SUMu007] gi|308329989|gb|EFP18840.1| hypothetical protein TMCG_01758 [Mycobacterium tuberculosis SUMu003] gi|308345928|gb|EFP34779.1| hypothetical protein TMGG_02359 [Mycobacterium tuberculosis SUMu007] Length=399 Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust. Identities = 399/399 (100%), Positives = 399/399 (100%), Gaps = 0/399 (0%) Query 17 MRSIPASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVY 76 MRSIPASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVY Sbjct 1 MRSIPASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVY 60 Query 77 KRSLAVFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDR 136 KRSLAVFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDR Sbjct 61 KRSLAVFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDR 120 Query 137 EIPGAWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLV 196 EIPGAWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLV Sbjct 121 EIPGAWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLV 180 Query 197 LATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDVIA 256 LATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDVIA Sbjct 181 LATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDVIA 240 Query 257 DAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAHFGVS 316 DAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAHFGVS Sbjct 241 DAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAHFGVS 300 Query 317 AEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGKGYVRA 376 AEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGKGYVRA Sbjct 301 AEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGKGYVRA 360 Query 377 VTDAHRRRVIDSNTAAIYLDAKVSQIPKLAESAELRSVV 415 VTDAHRRRVIDSNTAAIYLDAKVSQIPKLAESAELRSVV Sbjct 361 VTDAHRRRVIDSNTAAIYLDAKVSQIPKLAESAELRSVV 399 >gi|308232159|ref|ZP_07415126.2| hypothetical protein TMAG_02318 [Mycobacterium tuberculosis SUMu001] gi|308369739|ref|ZP_07418892.2| hypothetical protein TMBG_01054 [Mycobacterium tuberculosis SUMu002] gi|308372323|ref|ZP_07428237.2| hypothetical protein TMDG_00226 [Mycobacterium tuberculosis SUMu004] 15 more sequence titles Length=392 Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/392 (99%), Positives = 392/392 (100%), Gaps = 0/392 (0%) Query 24 VESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSLAVF 83 +ESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSLAVF Sbjct 1 MESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSLAVF 60 Query 84 FLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDREIPGAWR 143 FLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDREIPGAWR Sbjct 61 FLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDREIPGAWR 120 Query 144 LPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLVLATRGGK 203 LPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLVLATRGGK Sbjct 121 LPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLVLATRGGK 180 Query 204 VAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDVIADAHPSTQ 263 VAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDVIADAHPSTQ Sbjct 181 VAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDVIADAHPSTQ 240 Query 264 DRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAHFGVSAEAFLRR 323 DRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAHFGVSAEAFLRR Sbjct 241 DRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAHFGVSAEAFLRR 300 Query 324 LSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGKGYVRAVTDAHRR 383 LSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGKGYVRAVTDAHRR Sbjct 301 LSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGKGYVRAVTDAHRR 360 Query 384 RVIDSNTAAIYLDAKVSQIPKLAESAELRSVV 415 RVIDSNTAAIYLDAKVSQIPKLAESAELRSVV Sbjct 361 RVIDSNTAAIYLDAKVSQIPKLAESAELRSVV 392 >gi|254776178|ref|ZP_05217694.1| hypothetical protein MaviaA2_16110 [Mycobacterium avium subsp. avium ATCC 25291] Length=391 Score = 635 bits (1639), Expect = 3e-180, Method: Compositional matrix adjust. Identities = 320/392 (82%), Positives = 357/392 (92%), Gaps = 1/392 (0%) Query 24 VESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSLAVF 83 +ESSVLRWARESCGL+ +AAARKLGLPDDRV AWE G VPTIAQLRKAAEVYKRSLAVF Sbjct 1 MESSVLRWARESCGLSALAAARKLGLPDDRVEAWEAGRAVPTIAQLRKAAEVYKRSLAVF 60 Query 84 FLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDREIPGAWR 143 FLSEPPEGFDTLRDFRRLDG +G W+P LHEEFRRAHTQRDFALELA+ E+RE+P AWR Sbjct 61 FLSEPPEGFDTLRDFRRLDGTQAGHWSPELHEEFRRAHTQRDFALELAETEERELPVAWR 120 Query 144 LPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLVLATRGGK 203 +P+S D+ DA+IAARIR ALI+V PLPIP S+ PYEHLNAWVSAIE SG+LVLATRGGK Sbjct 121 IPVSADDNDAEIAARIRAALIDVGPLPIPPNSLSPYEHLNAWVSAIEASGMLVLATRGGK 180 Query 204 VAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDVIADAHPSTQ 263 V++DEMRGM LYFD LPVIVLNG D+PRPRLFSLLHEFVH+VLHTEGLCDV+AD P T Sbjct 181 VSVDEMRGMSLYFDVLPVIVLNGGDYPRPRLFSLLHEFVHLVLHTEGLCDVVADDRPRTA 240 Query 264 DRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAHFGVSAEAFLRR 323 +R+LEARCNA+AAAVLMPA VRARP+VI R + P+SWDY++LRPVAA FGVSAEAFLRR Sbjct 241 NRTLEARCNAVAAAVLMPAADVRARPDVIARRDIPASWDYDTLRPVAAQFGVSAEAFLRR 300 Query 324 LSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGKGYVRAVTDAHRR 383 LS LG+VPV++YRQRRAEFIAAHE+EA+RAR+ GGG+WYRNTVRDLGK YVRAVTDAHRR Sbjct 301 LSALGLVPVDLYRQRRAEFIAAHEEEADRART-GGGDWYRNTVRDLGKAYVRAVTDAHRR 359 Query 384 RVIDSNTAAIYLDAKVSQIPKLAESAELRSVV 415 RVIDSNTAAIYLDAKVSQIP+LAESAELR+VV Sbjct 360 RVIDSNTAAIYLDAKVSQIPRLAESAELRNVV 391 >gi|289444046|ref|ZP_06433790.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289416965|gb|EFD14205.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] Length=324 Score = 632 bits (1630), Expect = 3e-179, Method: Compositional matrix adjust. Identities = 313/314 (99%), Positives = 314/314 (100%), Gaps = 0/314 (0%) Query 1 VGIGHPMWVGWCIIIAMRSIPASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVG 60 +GIGHPMWVGWCIIIAMRSIPASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVG Sbjct 1 MGIGHPMWVGWCIIIAMRSIPASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVG 60 Query 61 EVVPTIAQLRKAAEVYKRSLAVFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRA 120 EVVPTIAQLRKAAEVYKRSLAVFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRA Sbjct 61 EVVPTIAQLRKAAEVYKRSLAVFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRA 120 Query 121 HTQRDFALELADAEDREIPGAWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYE 180 HTQRDFALELADAEDREIPGAWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYE Sbjct 121 HTQRDFALELADAEDREIPGAWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYE 180 Query 181 HLNAWVSAIETSGVLVLATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHE 240 HLNAWVSAIETSGVLVLATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHE Sbjct 181 HLNAWVSAIETSGVLVLATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHE 240 Query 241 FVHVVLHTEGLCDVIADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSS 300 FVHVVLHTEGLCDVIADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSS Sbjct 241 FVHVVLHTEGLCDVIADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSS 300 Query 301 WDYESLRPVAAHFG 314 WDYESLRPVAAHFG Sbjct 301 WDYESLRPVAAHFG 314 >gi|289751124|ref|ZP_06510502.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289691711|gb|EFD59140.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] Length=272 Score = 542 bits (1397), Expect = 3e-152, Method: Compositional matrix adjust. Identities = 271/272 (99%), Positives = 272/272 (100%), Gaps = 0/272 (0%) Query 144 LPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLVLATRGGK 203 +PLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLVLATRGGK Sbjct 1 MPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLVLATRGGK 60 Query 204 VAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDVIADAHPSTQ 263 VAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDVIADAHPSTQ Sbjct 61 VAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDVIADAHPSTQ 120 Query 264 DRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAHFGVSAEAFLRR 323 DRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAHFGVSAEAFLRR Sbjct 121 DRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAHFGVSAEAFLRR 180 Query 324 LSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGKGYVRAVTDAHRR 383 LSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGKGYVRAVTDAHRR Sbjct 181 LSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGKGYVRAVTDAHRR 240 Query 384 RVIDSNTAAIYLDAKVSQIPKLAESAELRSVV 415 RVIDSNTAAIYLDAKVSQIPKLAESAELRSVV Sbjct 241 RVIDSNTAAIYLDAKVSQIPKLAESAELRSVV 272 >gi|167838345|ref|ZP_02465204.1| hypothetical protein Bpse38_17690 [Burkholderia thailandensis MSMB43] Length=393 Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 142/386 (37%), Positives = 202/386 (53%), Gaps = 18/386 (4%) Query 28 VLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSLAVFFLSE 87 +L WARE + AAA+K+G +R+ WE GE VPT++QLR A VYKRS+ VFFL+E Sbjct 14 LLVWAREQSRMGVDAAAQKIGQSTERLTEWESGERVPTLSQLRTLANVYKRSIGVFFLNE 73 Query 88 PPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALE-LADAEDREIPGAWRLPL 146 P+ D+R+L+ +A TP L R A +R+ AL+ LA ED P AW L + Sbjct 74 RPKVPHRPVDYRQLEVSAIEFMTPALANGIREAEAKREAALDILAQLEDE--PPAWNLSI 131 Query 147 SGDEADADIAARIRKALIEVSPLPIPVAS----VDPYEHLNAWVSAIETSGVLVLATRGG 202 + D AA + V L I +A+ D YE LN W SAIE+ GV+V+ Sbjct 132 ARDMQPEAAAAML------VERLGITMATRARWTDHYEALNGWRSAIESLGVMVVQL--S 183 Query 203 KVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDVIADAHPST 262 +V I EMRG L LPVI+LN +D P R+F+LLHE H+ LCD++ D Sbjct 184 RVPIREMRGCSLAIFPLPVIILNSADSPLGRVFTLLHELTHLARAESSLCDIVEDGQREP 243 Query 263 QDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAHFGVSAEAFLR 322 +E CN +A L+P + A +V S T ++W + LR ++ F S EA LR Sbjct 244 LYEEVEIYCNHVAGNALVPRTELLALNDVQQASRT-TTWGNDQLRVISRRFWASREAILR 302 Query 323 RLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGKGYVRAVTDAHR 382 RL +G Y++ RA F+A E EA R S+G YR + G+ R +A+ Sbjct 303 RLLDMGKTSRVHYQEMRARFVA--EYEALREDSSGRVPQYRLVLLSNGRYLTRLAVNAYA 360 Query 383 RRVIDSNTAAIYLDAKVSQIPKLAES 408 I + + L+ K+ +PK+ + Sbjct 361 SSTITGSELSRILNTKLDHLPKIKNA 386 >gi|295696819|ref|YP_003590057.1| hypothetical protein Btus_2240 [Bacillus tusciae DSM 2912] gi|295412421|gb|ADG06913.1| protein of unknown function DUF955 [Bacillus tusciae DSM 2912] Length=388 Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 134/373 (36%), Positives = 198/373 (54%), Gaps = 12/373 (3%) Query 24 VESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSLAVF 83 + S+L WAR+ CG + AARK+ + + + +WE G PT+ QLR + Y+R A+F Sbjct 9 INPSMLVWARQDCGYSLEEAARKIRVKPEVLKSWETGWDSPTLRQLRALGKTYRRPAALF 68 Query 84 FLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDREIPGAWR 143 +L PP+ + DFR + A +P L E R+A+ +R A EL + EIP + Sbjct 69 YLDTPPDDRPAIADFRTVH-RAEPDLSPELGFEIRKAYDRRRIACELMNDMGEEIPD-FD 126 Query 144 LPLSGDEADADIAARIRKAL-IEVSPLPIPVASVDPYEHLNAWVSAIETSGVLVLATRGG 202 L E+ ++A RIR L I V A D YE L +W+SA+E SGVLV + Sbjct 127 LNAVLSESAQEVAHRIRMRLGISVE---AQFAWPDQYEALRSWISAVEKSGVLVFQS--T 181 Query 203 KVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDVIADAHPST 262 + + +MRG + LPVI LNG D PR R+F+LLHEFVH+ L G+CD + D P + Sbjct 182 DIPLAQMRGFSISKRPLPVITLNGKDSPRGRIFTLLHEFVHLTLDDSGICD-LRDQDPGS 240 Query 263 QDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAHFGVSAEAFLR 322 ++ LE CN IAA VL+P + + A+P +V+ WD L +A F VS E L Sbjct 241 RN-DLETFCNYIAAEVLVPREALLAQP--LVQQHRGKRWDDSDLSRLANRFKVSQEVMLL 297 Query 323 RLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGKGYVRAVTDAHR 382 RL G+ E Y+++R E+ + + + G +YR +R G+ Y V DA Sbjct 298 RLLLFGLADQEFYQEKRLEYRRIYAQHLQESSKEGYEPYYRRVLRANGRAYTGIVLDAFY 357 Query 383 RRVIDSNTAAIYL 395 +++I + YL Sbjct 358 QKIIGPIELSNYL 370 >gi|146343187|ref|YP_001208235.1| hypothetical protein BRADO6390 [Bradyrhizobium sp. ORS 278] gi|146195993|emb|CAL80020.1| conserved hypothetical protein; putative lambda repressor-like DNA-binding domains [Bradyrhizobium sp. ORS 278] Length=390 Score = 196 bits (497), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 131/399 (33%), Positives = 206/399 (52%), Gaps = 23/399 (5%) Query 18 RSIPASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYK 77 +S A + ++L WARE G++ AAR+L + +DR++A E G+ PT A+L + A++YK Sbjct 3 KSAKALINPAMLAWAREQAGISPDEAARRLHIEEDRLSALEKGDETPTFAKLLEIADLYK 62 Query 78 RSLAVFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDRE 137 R +++F+L PP+G+ ++DFRRL G SG ++P L R+A +R+ AL + D Sbjct 63 RPVSLFYLKTPPKGWQPIQDFRRLPGVDSG-FSPQLTYAIRQARERREIALTVRDELGEP 121 Query 138 I-PGAWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLV 196 P + L D R + E + D W +AIE +LV Sbjct 122 ARPFELKATLKTDVEMLGQEIREYVGVTEAKQQRFGRKAFD------GWRTAIEAKDILV 175 Query 197 LATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDVIA 256 ++ I EMRG L ++PVI++NG D R+F+LLHEF H+ L G+ ++ Sbjct 176 FVV--PRLKIREMRGTALAEQKMPVILINGKDRSNGRVFTLLHEFCHLALRQSGVSNMGG 233 Query 257 D----AHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAH 312 D HP +E CNA+AAA LMP D + R +++ + + SW + L +A Sbjct 234 DRNDAPHP-----DVEKFCNAVAAAALMPRDWL-LREQLVAQKGSQKSWRDDELDALALR 287 Query 313 FGVSAEAFLRRLSTLGIVPVEVYRQRRAEF--IAAHEDEAERARSAGGGNWYRNTVRDLG 370 FGVS EA LRRL TLG Y +R +F I A DE ++ S GG ++ + LG Sbjct 288 FGVSQEAVLRRLLTLGRTTQAFYDSKRVDFQKIYAQLDE-QKEPSEGGPKYHHVVLSQLG 346 Query 371 KGYVRAVTDAHRRRVIDSNTAAIYLDAKVSQIPKLAESA 409 + + + + + R A L+ KV+ +P + ++A Sbjct 347 RTFTQLIFQGYHDRYFTLRDVAGLLNMKVTTVPVMEKAA 385 >gi|296132593|ref|YP_003639840.1| protein of unknown function DUF955 [Thermincola sp. JR] gi|296031171|gb|ADG81939.1| protein of unknown function DUF955 [Thermincola potens JR] Length=394 Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 128/391 (33%), Positives = 205/391 (53%), Gaps = 19/391 (4%) Query 22 ASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSLA 81 A++ ++ WAR++ G + AA K+G+ +++ WE GE PT+ QLR A +VY+R A Sbjct 7 ANINPDIMVWARQTAGYSLEEAAHKIGVTPEKLQKWEAGEDKPTLRQLRMAGKVYRRPSA 66 Query 82 VFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDREIPGA 141 +F+ S P L DFR L ++TP L E RRA +R ALE+ E P Sbjct 67 LFYRSTTPTPHPILPDFRVLPD-TDLEYTPNLRFEIRRAFERRAIALEIMAQLGEEPP-- 123 Query 142 WRLPLSGD--EADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLVLAT 199 +L + D E + +AARIR+ L VS + + D Y LN+W++AIE G+ V Sbjct 124 -KLDIRADMSEDPSYLAARIREWL-GVS-VETQFSWRDHYVALNSWIAAIEAQGIFVF-- 178 Query 200 RGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDVIADAH 259 G V +++MRG + PV+ +N D PR R+F+LLHE H+VL GLCD+ H Sbjct 179 HAGGVEVEQMRGFSISERPFPVVAVNAKDSPRGRIFTLLHELTHIVLENGGLCDL----H 234 Query 260 PS--TQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAHFGVSA 317 + + SLEA CN +A VL+P++ + + ++++ + W+ L ++ F VS Sbjct 235 ETEIIGELSLEAYCNRVAGEVLVPSNALLSH-DIVIGNAGNFQWEDWQLGQLSNKFKVSQ 293 Query 318 EAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGKGYVRAV 377 E LRRL LG Y ++ +F+ ++ ++E + AG +YR +R G + V Sbjct 294 EVILRRLLLLGKTTQAFYARKHEKFLEQYQRQSEES-GAGFMRYYRRVLRANGPAFTSLV 352 Query 378 TDAHRRRVIDSNTAAIYLDA-KVSQIPKLAE 407 A+ I S + +L +S I ++ + Sbjct 353 LSAYYNDAISSRDLSNFLGGVHLSHIERIEQ 383 >gi|188587122|ref|YP_001918667.1| protein of unknown function DUF955 [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351809|gb|ACB86079.1| protein of unknown function DUF955 [Natranaerobius thermophilus JW/NM-WN-LF] Length=378 Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 116/387 (30%), Positives = 202/387 (53%), Gaps = 24/387 (6%) Query 22 ASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSLA 81 A + +L+WARE AARK+G+ ++ WE G+ +PT+ QLR A++YKR A Sbjct 7 AYINPEILKWAREEMNYDIDEAARKIGINSQKLIQWEAGQKMPTLRQLRLIAKLYKRPSA 66 Query 82 VFFLSEPPEGFD-TLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDREIPG 140 F+L + P+ L D+R+L + + TP + + RRA +R+ +EL + P Sbjct 67 FFYLKDAPDATKPDLPDYRQLPD-ENLERTPQMSLQIRRAFERRETYIELLHYLGKSCP- 124 Query 141 AWRLPLSGDEADADIAARIRKAL-IEVSPLPIPVASVDPYEHLNAWVSAIETSGVLVLAT 199 ++ + + ++A +IR+ L I + + D Y LN+W+ +E +L+ T Sbjct 125 EFKFEIDSKISTTELALKIREQLGISIDD---QFSWKDHYTALNSWIDLLEKQNILIFQT 181 Query 200 RGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDVIADAH 259 G++ + EMRG+ + LP+I++N D PR R+F+L+HE VH+V+ G+CD+ D + Sbjct 182 --GELDLAEMRGLSISEQFLPIILINSKDSPRGRIFTLMHELVHIVIGQSGICDL--DDN 237 Query 260 PSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAHFGVSAEA 319 S E CN +A +L+P V++ + I P +Y +A + VS E Sbjct 238 DSN---DFEVFCNKVAGEILVPKQVLKNDLDSITDYRDPFQLEY-----LANRYMVSVEV 289 Query 320 FLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGKGYVRAVTD 379 LRRL L + Y+++R E++ + ++++S G + VRD GK Y + Sbjct 290 ILRRLLILNKITKNFYQKKREEYLETY----KKSKSQGFLLPAKKVVRDNGKLYTDLIIS 345 Query 380 AHRRRVIDSNTAAIYL-DAKVSQIPKL 405 A+R +I + YL + K++ +PK+ Sbjct 346 AYRDDIISLRDVSNYLGNFKINHLPKV 372 >gi|188990002|ref|YP_001902012.1| hypothetical protein xccb100_0607 [Xanthomonas campestris pv. campestris str. B100] gi|167731762|emb|CAP49942.1| hypothetical protein xcc-b100_0607 [Xanthomonas campestris pv. campestris] Length=402 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 132/394 (34%), Positives = 198/394 (51%), Gaps = 11/394 (2%) Query 20 IPASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRS 79 + A ++ VL WARE+ G + +AA L + + + WE G+ P+I +LR+ AE+YKR Sbjct 5 LKAKIKPEVLHWARETAGYSVASAASALKIKQEVLGGWEAGDDAPSIPKLRQLAELYKRP 64 Query 80 LAVFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDREIP 139 LAV +L +PP F +RDFRRL G A P + E RRA +R+ A+ELA +P Sbjct 65 LAVLYLPKPPMKFMPMRDFRRLPGTAMPVVPPSIIIEERRARQRRELAIELAADLGDTVP 124 Query 140 GAWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLVLAT 199 + L S DE + AR+R+ L + + E L AW+ IE GVLV + Sbjct 125 -EFTLVASLDEDPELVGARLREQLGVTTQKQRGWRDAEGREALRAWIELIEAKGVLVFQS 183 Query 200 RGGKVAIDEMRGMCLYFDELPVIVL-NGSDHPRPRLFSLLHEFVHVVLHTEGLCD--VIA 256 K ++ G ++ P IV+ S PR R FSLLHE H+++ GL D + Sbjct 184 --DKFTSEDASGFAIWEPVAPAIVIARKSTPPRRRTFSLLHELAHLLVRASGLSDLEIEG 241 Query 257 DAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAHFGVS 316 DA +++ +E CNA+AAA L+P D + A+ V V + + W L +A +GVS Sbjct 242 DARRPPEEQRIEVFCNAVAAATLIPRDDLLAQQVVKVHPQDVAEWTDMELVELAKSYGVS 301 Query 317 AEAFLRRLSTLGIVPVEVYRQRRA----EFIAAHEDEAERARSAG-GGNWYRNTVRDLGK 371 EA LRRL T V Y+ R E++ E + + G N + + LG+ Sbjct 302 QEAILRRLMTFRRTTVRFYQATRQRYFEEWVKFRERQKALPKEKGIPRNMPQEALSTLGR 361 Query 372 GYVRAVTDAHRRRVIDSNTAAIYLDAKVSQIPKL 405 VR + + + + + + A YL KV I K+ Sbjct 362 PLVRMLLERYHQDRLSLSEVAGYLGLKVKHIGKV 395 >gi|289570677|ref|ZP_06450904.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289544431|gb|EFD48079.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] Length=80 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 80/80 (100%), Positives = 80/80 (100%), Gaps = 0/80 (0%) Query 336 RQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGKGYVRAVTDAHRRRVIDSNTAAIYL 395 RQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGKGYVRAVTDAHRRRVIDSNTAAIYL Sbjct 1 RQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGKGYVRAVTDAHRRRVIDSNTAAIYL 60 Query 396 DAKVSQIPKLAESAELRSVV 415 DAKVSQIPKLAESAELRSVV Sbjct 61 DAKVSQIPKLAESAELRSVV 80 >gi|21232396|ref|NP_638313.1| hypothetical protein XCC2965 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|21114174|gb|AAM42237.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] Length=408 Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 133/389 (35%), Positives = 180/389 (47%), Gaps = 18/389 (4%) Query 24 VESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQL-RKAAEVYKRSLAV 82 V+ SV+RWARES G++ A +L + VAAWE G PT QL R A EVYKR LAV Sbjct 25 VQPSVMRWARESIGMSIADVAARLKKGEGEVAAWESGAEAPTYPQLERLAYEVYKRPLAV 84 Query 83 FFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDREIPGAW 142 FFL PP ++FR L + + R+A + EL + AW Sbjct 85 FFLPAPPAEASPRQEFRTLPAEELANLSRDTYLHLRKARAYQLGLEELYAGVNPAAIKAW 144 Query 143 R-LPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLVLATRG 201 R + LS + AA IR L S + + D E L +W +A+E G V Sbjct 145 RAVQLSTGDDVVRKAAAIRLMLGITSEVQAGWGTDD--EALRSWRAAVERVGPFVFKESF 202 Query 202 GKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLC--DVIADAH 259 + I G CL E PVI LN S ++FSLLHEF HV+ G+ D+ Sbjct 203 KQETIS---GFCLRDSEFPVIYLNNSTTKTRQIFSLLHEFAHVLFDVNGISKFDISYANE 259 Query 260 PSTQDRSLEARCNAIAAAVLMP-ADVVRARPEVIVRSETPSSWDYESLRPVAAHFGVSAE 318 ++R++E CNAIAA VL+P A+ A ++ + ++ + L A FGVS E Sbjct 260 LPQRERAIEIFCNAIAAEVLIPGAEFDAATTDLAIIADYAPDIYFSRL---ARRFGVSRE 316 Query 319 AFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGKGYVRAVT 378 LRR G + Y ++ E+ + E S+GGG+WY N L G +R V Sbjct 317 VVLRRFLDRGRATRQFYEEKADEWNQQRQKE-----SSGGGSWYANQGSYLSDGMLREVF 371 Query 379 DAHRRRVIDSNTAAIYLDAKVSQIPKLAE 407 R I AA YL K +P L E Sbjct 372 GRRLRGQISPEKAADYLGVKPGTLPGLEE 400 >gi|330819495|ref|YP_004348357.1| hypothetical protein bgla_2g03690 [Burkholderia gladioli BSR3] gi|327371490|gb|AEA62845.1| hypothetical protein bgla_2g03690 [Burkholderia gladioli BSR3] Length=391 Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 132/397 (34%), Positives = 185/397 (47%), Gaps = 32/397 (8%) Query 22 ASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRK-AAEVYKRSL 80 A V+ +LRWAR++ GL+ AA L +AAWE G P+ AQL K A +VYKR L Sbjct 8 AGVQPELLRWARQTVGLSIEDAAHIGKLTAADLAAWEAGSDAPSYAQLEKLAYQVYKRPL 67 Query 81 AVFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDREIPG 140 AVFFL PPE R+FR L + + + RRAH F L LA+ P Sbjct 68 AVFFLPAPPEEHVPQREFRTLPDRDMRALSRDTYLQIRRAHA---FQLSLAEVFAGRNPA 124 Query 141 AWR----LPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEH----LNAWVSAIETS 192 R L LS + A RIR A L I + + +++ L W AIE Sbjct 125 DIRIWKQLALSLPVPVTEQARRIRDA------LGISLDAQSTWKNDELALKHWRKAIEEL 178 Query 193 GVLVLATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLC 252 GV V + + ++ G CL + P+I LN + FS+LHE H++L GL Sbjct 179 GVFVFKSSFKQ---GDISGFCLIDETFPLIYLNNGTTKTRQTFSMLHELAHILLGMNGLS 235 Query 253 DVIAD--AHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVA 310 D H ++++E CNA+AA VL+PA R + R+ S ++ +A Sbjct 236 KFDPDYIEHLPQAEQNIERFCNAVAAEVLIPAADFRQHAARLPRN--AESAPEQAFSELA 293 Query 311 AHFGVSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLG 370 + +GVS EA LRRL V YR++ A + A + R + GGN+Y N L Sbjct 294 SRYGVSREAVLRRLLDQARVTPSFYREQAARW-------ASQQRKSAGGNYYLNQGVHLS 346 Query 371 KGYVRAVTDAHRRRVIDSNTAAIYLDAKVSQIPKLAE 407 + R V H R+ + AA +LD K + L E Sbjct 347 DRFAREVVGRHYRQQLTLEQAANFLDIKPKRFAGLEE 383 >gi|134292093|ref|YP_001115829.1| hypothetical protein Bcep1808_3376 [Burkholderia vietnamiensis G4] gi|134135250|gb|ABO56364.1| protein of unknown function DUF955 [Burkholderia vietnamiensis G4] Length=390 Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 134/384 (35%), Positives = 180/384 (47%), Gaps = 28/384 (7%) Query 24 VESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRK-AAEVYKRSLAV 82 V++ VLRWARE+ GL+ A L +P VA WE G PT AQL K A +V+KR LAV Sbjct 9 VQAEVLRWARETVGLSLDEVAIMLRVPAAEVADWEAGAGAPTYAQLEKLAYQVFKRPLAV 68 Query 83 FFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDREIPGA- 141 FFL PP+ +FR L A + + R+A F L L + P A Sbjct 69 FFLPAPPDEKVPQSEFRTLPEADMRSLARDTYLQIRQAQA---FQLSLGEVFGGRNPAAR 125 Query 142 --WR-LPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLVLA 198 W+ LS E + AAR+R AL L + + L W A+E +G+ V Sbjct 126 MIWKSSSLSLSEPVSRQAARVRDAL--GITLDEQASWRNDELALKQWRKAVEEAGIFVFK 183 Query 199 TRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDV---I 255 + E+ G CL D P+I LN S ++FSL+HE H++L+ GL + Sbjct 184 S---AFRQREISGFCLMDDAFPIIYLNNSTTKTRQIFSLMHELAHLLLNMNGLSKLDSGY 240 Query 256 ADAHPSTQDRSLEARCNAIAAAVLMPADVV-RARPEVIVRSETPSSWDYESLRPVAAHFG 314 DA P +R +E CNAIAA +L+P V R + E+ S E+ +A +FG Sbjct 241 IDALPQA-ERKIERFCNAIAAEILIPHAVFDRLAATLPANVESVSE---EAFAELAGYFG 296 Query 315 VSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGKGYV 374 VS EA LRRL G V YR + A + A D A GG++Y N L + Sbjct 297 VSREAVLRRLLDQGRVSPAFYRSKAAMWSAQRRDTA-------GGSYYANQGAYLSDRFA 349 Query 375 RAVTDAHRRRVIDSNTAAIYLDAK 398 R V H R I AA +L K Sbjct 350 REVVGRHYRHQITLEQAADFLGIK 373 >gi|222445169|ref|ZP_03607684.1| hypothetical protein METSMIALI_00790 [Methanobrevibacter smithii DSM 2375] gi|222434734|gb|EEE41899.1| hypothetical protein METSMIALI_00790 [Methanobrevibacter smithii DSM 2375] Length=382 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 110/396 (28%), Positives = 180/396 (46%), Gaps = 35/396 (8%) Query 22 ASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSLA 81 A + +++ WAR G E G WE GE PT QLR+ + Y A Sbjct 5 AIINPAMMIWARRYAGFIEEYEELLPGYIKKHYKLWENGEKYPTWNQLRQVSNKYNVPTA 64 Query 82 VFFLSEPPEGFD---TLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDREI 138 FF+ P+ FD TL +FR++D +P L +E R++ +R+ L+L + I Sbjct 65 FFFMETEPD-FDDLPTLINFRKIDPDNYKNESPELIKEIRKSEHRREIYLDLLFELNEPI 123 Query 139 PGAWRLPLSGDEADADIAARIRK----ALIEVSPLPIPVASVDP--YEHLNAWVSAI-ET 191 P + S ++ ++ IR+ +L E S+D Y LN W I E Sbjct 124 PKFEVIEES--KSRRNVVKYIREKLGISLDEQKSWIRKNNSLDKEHYNFLNKWKEIIIEK 181 Query 192 SGVLVLATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGL 251 G+L+ T G V + EMRG+C++ +E+P+I+LNG D R+FSL HE H++L + Sbjct 182 MGILIFETDG--VILGEMRGLCIFHEEIPIILLNGKDTTNGRIFSLFHELTHLLLGESAI 239 Query 252 CDVIADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAA 311 C+ + + E CNA+A L+PAD + +I +S+ ++ Sbjct 240 CE-------NNELSDEEIFCNAVAGEFLVPADDLNNNAHIIST---------DSINGLSH 283 Query 312 HFGVSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGK 371 +GVS LRRL + Y R I ++ + GGN++ N ++ + Sbjct 284 LYGVSTHVILRRLYDTHNISHNEYNSR----IETLKEFSTSKSKGSGGNYFNNVIKYNSE 339 Query 372 GYVRAVTDAHRRRVIDSNTAAIYLDAKVSQIPKLAE 407 Y V +A+ +I+S + + + K IP L + Sbjct 340 SYCAIVLEAYENGIINSGEFSKFTNLKKKYIPDLQK 375 >gi|307299103|ref|ZP_07578905.1| protein of unknown function DUF955 [Thermotogales bacterium MesG1.Ag.4.2] gi|306915528|gb|EFN45913.1| protein of unknown function DUF955 [Thermotogales bacterium MesG1.Ag.4.2] Length=373 Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 116/373 (32%), Positives = 171/373 (46%), Gaps = 39/373 (10%) Query 17 MRSIPASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVY 76 M S S+ L R + G + AAA+K+G+ +A+WE GE PT QL KA+ Y Sbjct 1 MNSTRMSINHKTLAETRVNLGFSLDAAAKKIGVKSLVLASWESGEKKPTYIQLMKASRTY 60 Query 77 KRSLAVFF------LSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALEL 130 A FF +PP DFR Q P + E R A +R+ A+EL Sbjct 61 GLPSAYFFGDNVYAEEQPP-------DFRSFPDILQRQ-IPEIRLEIRYARERRETAIEL 112 Query 131 ADAEDREIPGAWRLPLSGDEADADIAARIRKAL-IEVSPLPIPVASVDPYEHLNAWVSAI 189 D +IP L + + + IR L I+V + +PYE LN W + Sbjct 113 LSELDEDIP---YLEIPALKNSESLTKVIRDVLGIQVD---TQMKWSNPYEALNKWCLSF 166 Query 190 ETSGVLVLATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTE 249 E +G++V G + +D MRG CL LPVI LN D P R+F+L HE H+V Sbjct 167 EKAGIIVFQFSG--IDVDTMRGFCLNERPLPVIGLNIKDSPHARIFTLFHELRHLVFREG 224 Query 250 GLCDVIADAHPSTQDRSLEARCNAIAAAVLMP-ADVVRARPEVIVRSETPSSWDYESLRP 308 G+CD+ H E CN A L+P D++R R VR+ T +W+ L Sbjct 225 GICDLHDSGH--------EKLCNEFAGEFLVPDQDLLRIRA---VRTHTGVTWETSELNE 273 Query 309 VAAHFGVSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRD 368 ++ F VS E LRRL +LG+ Y+Q F A +++ R S G ++ +++ Sbjct 274 LSRIFSVSQEVILRRLLSLGLTTKSFYQQ----FRVASVEKSRRPSSRGYMSYTVRLLKE 329 Query 369 LGKGYVRAVTDAH 381 G + + ++ Sbjct 330 NGAFFTNLLVSSY 342 >gi|78188288|ref|YP_378626.1| hypothetical protein Cag_0309 [Chlorobium chlorochromatii CaD3] gi|78170487|gb|ABB27583.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3] Length=392 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 109/406 (27%), Positives = 192/406 (48%), Gaps = 46/406 (11%) Query 22 ASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSLA 81 A + + V +WARES +TE AA K+ + D+ WE GE PTI Q + A+ Y+R A Sbjct 5 AYITAKVFKWARESAKMTEEIAASKVAVSIDKFKDWENGEDFPTIRQAQTLAKAYRRPFA 64 Query 82 VFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELA-DAEDREIPG 140 +FFL + P F L+DFR+ S + + R ++ + E+ D + +P Sbjct 65 LFFLPDVPTDFQPLQDFRK---TGSKELSTSSIFIIREIQQKQAWISEVNEDNNENRVPF 121 Query 141 AWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLVLATR 200 R + + + A+ A + ++PL S +P + W+ E++G+ + T Sbjct 122 IGRFNIKDNPV---LVAKDILATLNINPL--NYKSNNP---IIEWIDKAESNGIFISRTS 173 Query 201 G----GKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDVIA 256 K+ +E++G + D P I +N D P+LF+L+HE H+ + G+ + Sbjct 174 FIHSRLKLDSNEIQGFAIADDFAPFIFINSDDWNAPQLFTLVHELSHLWIAETGISN--- 230 Query 257 DAHPSTQD----RSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPV--- 309 D PS ++ +E CN +AA VLMP + + ++ S +++ + V Sbjct 231 DVEPSIKNVGDYNPIELFCNEVAANVLMPKEFI----------DSLDSKAFDNAKEVFKN 280 Query 310 AAHFGVSAEAFLRRLSTLGIVPVEVYRQRRA-------EFIAAHEDEAERARSA---GGG 359 A GVS+ A L R L I+ + Y+Q + EF+ E + + + GG Sbjct 281 AKMIGVSSFALLVRALNLNIISLSTYKQLKQLADIEYNEFLKREEAKKIKQKENEKPGGP 340 Query 360 NWYRNTVRDLGKGYVRAVTDAHRRRVIDSNTAAIYLDAKVSQIPKL 405 N++ + + + + V DA R VI+ + A+ L+ +V++ PKL Sbjct 341 NYFLLQLNRNSRLFTQTVLDAFRGGVIEPSLASNLLNVQVNKFPKL 386 >gi|126436461|ref|YP_001072152.1| hypothetical protein Mjls_3885 [Mycobacterium sp. JLS] gi|126236261|gb|ABN99661.1| protein of unknown function DUF955 [Mycobacterium sp. JLS] Length=375 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 125/394 (32%), Positives = 182/394 (47%), Gaps = 43/394 (10%) Query 22 ASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSLA 81 A ++ S L WARE+ +T AR + + RV +E G+ PT QL A R L Sbjct 4 APIDPSALTWARETSRVTVDDLARAMNVKPSRVIEFESGDAEPTFRQLTLMAGKLDRPLG 63 Query 82 VFFLSEPPEGFDT--LRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDREI- 138 FF + PP D DFR G + G P L +E RRA RD LEL +R + Sbjct 64 -FFFAPPPAASDVPDTADFR---GRSDGSLPPDLAKEMRRAEQHRDAMLELGGRPERRVE 119 Query 139 --PGAWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLV 196 P W E A+ A+ +R P +S + + + W +E +G+LV Sbjct 120 VGPVTW-------ETIAERASDLRGKFGLTDTFVPPESSNN--QVFSFWRGLLEDNGILV 170 Query 197 LATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDVIA 256 L T K+ ++ RG+ ++ DELPV+++NG D P R F+L HE H++ T GLC + Sbjct 171 LQTT--KIPLETFRGLSVHHDELPVVIVNGGDSPAGRTFTLFHEVAHLINRTSGLCAL-- 226 Query 257 DAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAHFGVS 316 + + EA N +AA LMP VR ++ E D+ +A HF VS Sbjct 227 -----RETVNEEALANNFSAAFLMPETAVRM--NILDDVEPGKVADH-----LARHFKVS 274 Query 317 AEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSA---GGGNW--YRNTVRDLGK 371 A A RL LG + R AA E++ E+AR A G G +R RDLG Sbjct 275 ALAAAVRLRRLGFISDSDLDGIR----AASEEQWEQARQAQKQGTGFVPPWRLRYRDLGP 330 Query 372 GYVRAVTDAHRRRVIDSNTAAIYLDAKVSQIPKL 405 Y+ + A R +D A L+A++ + ++ Sbjct 331 SYIGTIARALEDRRVDLVDATYLLNARLPMVEQM 364 >gi|218960562|ref|YP_001740337.1| hypothetical protein CLOAM0221 [Candidatus Cloacamonas acidaminovorans] gi|167729219|emb|CAO80130.1| conserved hypothetical protein [Candidatus Cloacamonas acidaminovorans] Length=390 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 118/407 (29%), Positives = 195/407 (48%), Gaps = 42/407 (10%) Query 22 ASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSLA 81 A + SV+RWARE LT AA KLG + WE GE +PT+AQ R AA++Y R+ A Sbjct 6 AQITPSVIRWAREKAKLTIDQAAEKLGRTPTDIQKWENGEALPTLAQARSAAKLYGRAFA 65 Query 82 VFFLSEPPEGFDTLRDFR-RLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDREIPG 140 VF+L PP+ F+ LRDFR D S + + R+ + ++ E +E G Sbjct 66 VFYLPSPPDDFEPLRDFRMNQDSIISSKSLLFI----RQIQWKAEWLAEFLVSE-----G 116 Query 141 AWRLPLSG----DEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLV 196 + +L G + D+A+ I + L ++S L A+ P + L+ W++ E G+ + Sbjct 117 SQKLDFVGRYDINSPIEDVASNIIETL-DIS-LSDHRATRSPSKALSLWINKSENCGINI 174 Query 197 LATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDVIA 256 + R + DE RG + D P I LN +D R+F+L+HE VHV ++ +G+ D I Sbjct 175 V--RDSSINSDEFRGFVIINDYAPFIFLNSNDSYSSRVFTLVHELVHVWINQQGIIDPIV 232 Query 257 DAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYES--------LRP 308 + ++ ++E CN IA ++L I +E WD E+ + Sbjct 233 -WNGTSAANAIETFCNRIAQSIL------------IKETELIELWDSENDTASIIKICQD 279 Query 309 VAAHFGVSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRD 368 +++ +S E R L + Y+ R I + E+ R + G + + Sbjct 280 ISSSMVISPEMVARCLLDNKRISHNDYQLVREAGIDLWKKHKEKQRESDGMV-SPSLMAV 338 Query 369 LGKGYV--RAVTDAHRRRVIDSNTAAIYLDAKVSQIPKLAESAELRS 413 L GY+ + V +A++ +I A+ L+ KV+ KL+++ LRS Sbjct 339 LKNGYLFSQIVLNAYQTGLISGRDASSLLNFKVNNFGKLSDNIPLRS 385 >gi|166367767|ref|YP_001660040.1| hypothetical protein MAE_50260 [Microcystis aeruginosa NIES-843] gi|166090140|dbj|BAG04848.1| hypothetical protein MAE_50260 [Microcystis aeruginosa NIES-843] Length=395 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 108/394 (28%), Positives = 180/394 (46%), Gaps = 24/394 (6%) Query 24 VESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSLAVF 83 V +++WARE + + A K + WE GE PT +QL K AE+YKR LA+F Sbjct 8 VNPKIIQWARERARYSLESVAVKFKKDVSVIEKWESGEDFPTYSQLEKLAEIYKRPLALF 67 Query 84 FLSEPP------EGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDRE 137 F EPP + F TL DF + AA + R+A + E+ + + Sbjct 68 FFPEPPLEAEEKQEFRTLPDFEIENLAADTIYA------LRQAKAMQLSLQEINNGINPS 121 Query 138 IPGAWR-LPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLV 196 ++ + +S + +A +IR L L + D L W SA+E +G+ + Sbjct 122 TKKIFQDIAVSSSDDLRRLAEQIRNYL--NVTLEEQLTWNDQETALKKWRSAVEEAGIFI 179 Query 197 LATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDVIA 256 R K E+ G CL E P+I LN S ++F++ HE H++L T G+ Sbjct 180 FK-RSFKQR--EISGFCLIDIEFPIIYLNNSTEKSRQIFTIFHELAHILLQTNGITKSDD 236 Query 257 DAHPSTQ--DRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAHFG 314 S Q ++S+E CN AA L+P V E+I + + + + + +++ + Sbjct 237 RYINSLQGANKSIEIFCNKFAAEFLLPNHVF---SEIIRETVVNVNDNDKIISKISSDYK 293 Query 315 VSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGKGYV 374 VS E LR+L ++ + Y + E+ + +++ GGN Y N LG+ Y+ Sbjct 294 VSREVVLRKLLDNNLISQKEYTLKVNEWYSEQVGKSQDKNKKSGGNPYANQATYLGENYL 353 Query 375 RAVTDAHRRRVIDSNTAAIYLD-AKVSQIPKLAE 407 + V + + + D A YL+ KV+ + KL + Sbjct 354 KLVFNKYYQGQYDIERVADYLNIKKVATVEKLEQ 387 >gi|206564111|ref|YP_002234874.1| putative DNA-binding protein [Burkholderia cenocepacia J2315] gi|198040151|emb|CAR56134.1| putative DNA-binding protein [Burkholderia cenocepacia J2315] Length=390 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 136/387 (36%), Positives = 186/387 (49%), Gaps = 34/387 (8%) Query 24 VESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRK-AAEVYKRSLAV 82 V+ VLRWARE+ GL+ A L VA WE G PT AQL K A +V+KR LAV Sbjct 9 VQPEVLRWARETVGLSIDEVATMLRAAPSEVADWETGAGAPTYAQLEKLAYQVFKRPLAV 68 Query 83 FFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDREIPG-- 140 FFL PPE R+FR L + + R+AH F L L + + P Sbjct 69 FFLPAPPEEKVPQREFRTLPETDMRSLARDTYLQIRQAHA---FQLSLKEVFNGRNPADK 125 Query 141 -AWR-LPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLVLA 198 W+ L LS E + A ++R+ L+ ++ L + + L W AIE +GV V Sbjct 126 LIWKSLALSLSEPVSAQADKVRR-LLGIT-LDEQTSWRNDDLALKQWRKAIEDAGVFVFK 183 Query 199 TRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDVIA-- 256 + + E+ G CL + P+I LN S ++FSLLHE H++L GL + + Sbjct 184 SSFKQ---REISGFCLMDEAFPIIYLNNSTTKTRQIFSLLHELAHLLLSMNGLSKLDSGY 240 Query 257 -DAHPSTQDRSLEARCNAIAAAVLMPAD----VVRARPEVIVRSETPSSWDYESLRPVAA 311 DA P +R +E CNAIAA VL+P +V P S+ S+ D E +A+ Sbjct 241 IDALPKA-EREIERFCNAIAAEVLIPPSAFDRLVAGHP-----SDVESAPD-EMFAELAS 293 Query 312 HFGVSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGK 371 +FGVS EA LRRL G V Y+ R+A +A + R A GG++Y N L Sbjct 294 YFGVSREAVLRRLLDQGRVSQAFYK-RKATIWSAQQ------REAKGGSYYANQGAYLSD 346 Query 372 GYVRAVTDAHRRRVIDSNTAAIYLDAK 398 + R V H R I AA +L K Sbjct 347 RFAREVVGRHYRHQITLEQAADFLGIK 373 >gi|313205450|ref|YP_004044107.1| hypothetical protein Palpr_2994 [Paludibacter propionicigenes WB4] gi|312444766|gb|ADQ81122.1| protein of unknown function DUF955 [Paludibacter propionicigenes WB4] Length=392 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 113/399 (29%), Positives = 188/399 (48%), Gaps = 32/399 (8%) Query 22 ASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSLA 81 A + +VL+WARES +TE AA K+ + +++ WE G+ PTI Q + A+ YKR A Sbjct 5 AYITPNVLQWARESARMTEEIAASKVSVSVEKLKEWEEGKDQPTIHQAQTLAKAYKRPFA 64 Query 82 VFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDREIPGA 141 +FFL E P F L+DFR S Q T R Q+ + + E+ E + Sbjct 65 LFFLPEVPRDFQPLQDFR---STGSKQLTTSSIFIIREVQ-QKQAWISDVNKENNEDKLS 120 Query 142 WRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLVLATR- 200 + S ++ A +A R L + P+ +V+P + W++A E +G+ V T Sbjct 121 FVGRFSMNDNPAIVA---RDILNTLGINPLHYRTVNP---IKEWINAAEANGIFVSRTSF 174 Query 201 -GGKVAID--EMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLC-DVIA 256 + +D E++G + P + +N D P+LF+L+HE H+ + G+ DV Sbjct 175 INSYLTLDSEELQGFAISDPYAPFVFVNSVDWNAPQLFTLVHELAHIWIAETGISNDVEP 234 Query 257 DAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAHFGVS 316 + + + +E CN +AA LMPA+ + + T S+ + L A GVS Sbjct 235 EIRNNQKHHPVELFCNEVAANALMPAEFFDG-----LDATTFSNANV--LFRTARLLGVS 287 Query 317 AEAFLRRLSTLGIVPVEVYRQRR----AEFIAAHEDEAER------ARSAGGGNWYRNTV 366 + A L R L + Y + + AEF A EAE+ ++GG N+Y + Sbjct 288 SFALLVRSFNLNKISDSHYHKLKQEADAEFAAFLLREAEKKLKQKDKETSGGPNYYMLQL 347 Query 367 RDLGKGYVRAVTDAHRRRVIDSNTAAIYLDAKVSQIPKL 405 G+ + + V D+ + I+ A+ L+ +V++ KL Sbjct 348 NRNGRLFTQTVIDSFKGGFIEPTMASQLLNVQVNKFSKL 386 >gi|229588241|ref|YP_002870360.1| hypothetical protein PFLU0693 [Pseudomonas fluorescens SBW25] gi|229360107|emb|CAY46961.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25] Length=378 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 101/350 (29%), Positives = 164/350 (47%), Gaps = 30/350 (8%) Query 22 ASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSLA 81 A + +L W+R+ GL+E A+ L + +RV WE G+ +P+ +Q +K A + + Sbjct 5 AFINPEILSWSRQRAGLSEAQIAKGLTVKLERVKEWEAGQSLPSFSQAQKWAAIAHVAFG 64 Query 82 VFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALE-LADAEDREIPG 140 V FL PP L D R + G + + L + R ++D+ LE L D E P Sbjct 65 VLFLKAPPPESLPLPDLRTVGGVFPHKPSLNLMDTVRDVLRKQDWYLEYLQDHEPS--PL 122 Query 141 AWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLV---- 196 ++ S D+ A IR+ L + A + ++ A V+ E +G+LV Sbjct 123 SFVGSFSSRSPIKDVVADIRRVL----GMTDAFARMSYDDYFRALVNGAEEAGILVMRSG 178 Query 197 --LATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDV 254 L K+ + E RG + PV+ +N +D P RLF+L+HE VHV + + G+ D Sbjct 179 VALGNTHRKLNVSEFRGFAISNALAPVVFINSADAPTARLFTLMHELVHVWIGSTGVSD- 237 Query 255 IADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAHFG 314 ++H + Q+ EA CNA+A L P V R + ++ + W+ E+L P+A F Sbjct 238 -GNSHSARQE---EAFCNAVAGEFLAPELVFR------TQWDSNTHWE-ENLAPLAGRFR 286 Query 315 VSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRN 364 VS RR LG + + Y + A+ D + GG++YR Sbjct 287 VSTLVIARRACDLGCINSDHYGAYYRRILQAYRD-----KDGSGGDYYRT 331 >gi|227820711|ref|YP_002824681.1| conserved hypothetical protein contains helix-turn-helix type 3 domain [Sinorhizobium fredii NGR234] gi|227339710|gb|ACP23928.1| conserved hypothetical protein contains helix-turn-helix type 3 domain [Sinorhizobium fredii NGR234] Length=389 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 116/397 (30%), Positives = 181/397 (46%), Gaps = 19/397 (4%) Query 24 VESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRK-AAEVYKRSLAV 82 ++ ++L+WARES L+ A +L + + AWE G P+ AQL K A E+YKR LA+ Sbjct 4 IQPALLKWARESAHLSTEEVAGRLKKSVEEIDAWESGTDAPSYAQLEKLAYELYKRPLAI 63 Query 83 FFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDREIPGAW 142 FFL PP+ +FR L + RRA + +EL W Sbjct 64 FFLPSPPKEPRPEAEFRALPDSDLRNLRRDTVLLIRRARAYQASLIELFGGSSPTAEPLW 123 Query 143 R-LPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLVLATRG 201 + + + A AA +R +L +P + D E L W A+E GV V Sbjct 124 KQVEIDASRPSARQAAVVRASLGVPAPGAREWGAPDGDEALKIWRKAVEARGVFVFKDTF 183 Query 202 GKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDVIADAHP- 260 + E+ G CL ELP++V+N S ++FSLLHE HV++ + D P Sbjct 184 KQ---SEISGFCLEHSELPIVVINNSTTKTRQIFSLLHELAHVLMGRRAISTF--DEAPL 238 Query 261 ---STQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAHFGVSA 317 S ++ +E CN IAA +L+P D A +V + + ++ +AA + VS Sbjct 239 NRLSPAEQRIERFCNQIAADILVPPDDFAA--QVSGLPQNVEALPSDAFAALAARYRVSR 296 Query 318 EAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGKGYVRAV 377 E LRR V Y +R+ E+ D + + + GG++Y L + + V Sbjct 297 EVILRRFRDADRVSQAFYEKRKREW-----DGQKIHKGSSGGSFYSTKGAYLSERLMSEV 351 Query 378 TDAHRRRVIDSNTAAIYLDAKVSQIPKLAESAELRSV 414 + RR I+ + AA ++ K Q+ +L ES LR + Sbjct 352 FARYGRRQINVDEAAEFIGVKPKQVDEL-ESRFLRGM 387 >gi|213971555|ref|ZP_03399665.1| DNA-binding protein [Pseudomonas syringae pv. tomato T1] gi|213923658|gb|EEB57243.1| DNA-binding protein [Pseudomonas syringae pv. tomato T1] Length=377 Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 108/354 (31%), Positives = 161/354 (46%), Gaps = 32/354 (9%) Query 19 SIPASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKR 78 S A V S+L W+RE GL+ ARKL + +RV WE GE PT Q +K A V Sbjct 2 SQAAFVNPSILTWSRERAGLSAAQVARKLPVKPERVEEWESGEARPTFLQAQKWASVAHV 61 Query 79 SLAVFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDRE- 137 FL +PP L D R + +A + + L + + A ++D+ LE ++R+ Sbjct 62 PFGFLFLLQPPVEQLPLPDLRTVGNSAPLRPSLELLDTVKDAIRKQDWYLEYLHVQERQP 121 Query 138 IPGAWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLV- 196 +P R + + IR+ L V P + +D ++ A + A E +GVLV Sbjct 122 LPFVGR--FDSRTPVKTVVSDIRQTL-GVDP---EKSRLDYDKYSRALIDAAEVAGVLVM 175 Query 197 -----LATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGL 251 L K+ + E RG + PV+ +N SD P RLF+L+HE H+ + + G+ Sbjct 176 RSGIALGNTHRKLEVSEFRGFAISNPLAPVVFINSSDAPTARLFTLMHELAHIWIGSSGV 235 Query 252 CDVIADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYES-LRPVA 310 D + R E CNA+A L+ PE + R+ +S ++ES L +A Sbjct 236 SDA-----GTANGREEERFCNAVAGEFLV--------PEALFRTVWSASIEWESNLATLA 282 Query 311 AHFGVSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRN 364 F VS RR LG V E Y + + A DE G G++YRN Sbjct 283 TRFHVSKLVIGRRAMDLGYVTQEQYGAYYQKILKAFRDE-----KGGAGDYYRN 331 >gi|284040998|ref|YP_003390928.1| hypothetical protein Slin_6169 [Spirosoma linguale DSM 74] gi|283820291|gb|ADB42129.1| protein of unknown function DUF955 [Spirosoma linguale DSM 74] Length=392 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 107/403 (27%), Positives = 179/403 (45%), Gaps = 42/403 (10%) Query 22 ASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSLA 81 A + VLRWAR + + AA K+ + +++ WE G PTI Q + A++YKR A Sbjct 5 APITPQVLRWARLTAKFSIEIAATKVKVAAEKLDEWENGISQPTIVQAQSLAKLYKRPFA 64 Query 82 VFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDREIPGA 141 + FL P F L+D+R+ S + E R +F E+ E P Sbjct 65 ILFLPNIPTDFQPLQDYRKNADELSTASIFIIREIQERQAWISEFY-----QENGEAP-- 117 Query 142 WRLPLSG-----DEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLV 196 LP G D +D +AA I K L SP + +P + WV E GV + Sbjct 118 --LPFVGKFSIRDSSDT-VAADILKTLEIRSPY---YQTSNP---VKEWVDKAEAKGVFI 168 Query 197 ----LATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLC 252 K DE++G + + P I +N D P+LF+L+HE H+ + G+ Sbjct 169 SRSSFIHSRMKFDSDEIKGFAIADEYAPFIFVNTEDWKAPQLFTLVHELAHIWIGQSGVS 228 Query 253 D-VIADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAA 311 + + Q +EA CN +AAA LM + + + +S+ L A Sbjct 229 NESDLELKLKHQIHQVEAFCNEVAAAALMQNESMNRLNRNVFKSQV-------ELFTTAK 281 Query 312 HFGVSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHED---------EAERARSAGGGNWY 362 ++GVS+ A L R + ++ + Y +A+ +A++ E+++ + GG ++Y Sbjct 282 NWGVSSFALLVRALHMNLISTQEYNNSKAQADSAYKQYLVREEAKRESQKKDTDGGPSYY 341 Query 363 RNTVRDLGKGYVRAVTDAHRRRVIDSNTAAIYLDAKVSQIPKL 405 + + + + R V +A+R +I A+ L+ K + PKL Sbjct 342 QLQLNKVSPHFTRFVLEAYRSGMIPPTQASSLLNVKTNNFPKL 384 >gi|326795085|ref|YP_004312905.1| hypothetical protein Marme_1813 [Marinomonas mediterranea MMB-1] gi|326545849|gb|ADZ91069.1| protein of unknown function DUF955 [Marinomonas mediterranea MMB-1] Length=374 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 104/357 (30%), Positives = 164/357 (46%), Gaps = 39/357 (10%) Query 31 WARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSLAVFFLSEPPE 90 WAR G++ A LG+ +++V AWE GE P++AQ R A+ S + F +PP Sbjct 13 WARVRAGMSVSQLADALGVKEEKVIAWENGENAPSMAQARNIADKTLISFGLLFAKQPPA 72 Query 91 GFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDREIPGAWRLPLSGDE 150 + D R +DG + + L R+ ++++ E ++ ++ ++ + D Sbjct 73 DDLPIPDLRTIDGRELQKPSASLIAIIRKVLERQEWYKEYR-KDNLKLENSFITQFTMDS 131 Query 151 ADADIAARIRKALIEVSPLPIPVASV-DPYEHLNAWVSAIETSGVLVLATR--GGK---V 204 + + A +R L LP + D YE + IE G++V+ R GGK + Sbjct 132 DTSSVVADMRNRL----SLPAKRSGRWDDYERVVR--QHIEKLGIMVMRERDLGGKSKPL 185 Query 205 AIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDVIADAHPSTQD 264 + E RG + D PVI +N +D +LF++LHE H+ + GL DV H Sbjct 186 LVQEFRGFAICDDVAPVIFINSADAQTAQLFTMLHELAHIWIGQSGLSDVSPSNH----- 240 Query 265 RSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLR----PVAAHFGVSAEAF 320 R EA+CNAIAA L+P D E W + R +A HF VS Sbjct 241 RKEEAKCNAIAAEFLVPED------------EFLQVWIEKDWRLHVSAIAKHFHVSRWVI 288 Query 321 LRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGKGYVRAV 377 +RR TLG++ Y I +++ + ER S GG ++Y + LGK + AV Sbjct 289 VRRALTLGLITEAQY----YSMIESYKKDHER-NSNGGPSYYTTKISRLGKSFASAV 340 >gi|289623616|ref|ZP_06456570.1| DNA-binding protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648203|ref|ZP_06479546.1| DNA-binding protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330866658|gb|EGH01367.1| DNA-binding protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length=378 Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 107/363 (30%), Positives = 161/363 (45%), Gaps = 30/363 (8%) Query 22 ASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSLA 81 A V S+L W+RE GL+ ARKL + +R+ WE G+ PT Q +K A V Sbjct 5 AFVNPSILTWSRERAGLSAAQVARKLPVKPERIKEWEAGKTRPTFLQAQKWASVAHVPFG 64 Query 82 VFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALE-LADAEDREIPG 140 FL +PP L D R + +A + + L + + A ++D+ LE L E + +P Sbjct 65 FLFLPQPPVEQLPLPDLRTVGNSAPLRPSLELVDTVKDAIRKQDWYLEYLHVQEHQPLPF 124 Query 141 AWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLV---- 196 R + + IR+ L V P + +D ++ A + A E +GVLV Sbjct 125 VGR--FDSRTPVKTVVSDIRQTL-GVDP---EKSRLDYDKYSRALIDAAEVAGVLVMRSG 178 Query 197 --LATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDV 254 L K+ + E RG + PV+ +N SD P RLF+L+HE H+ + + G+ D Sbjct 179 IALGNTHRKLEVSEFRGFAISNSLAPVVFINSSDAPTARLFTLMHELAHLWIGSSGVSDA 238 Query 255 IADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAHFG 314 + R E CNA+A L+P ++ RA + E+ +L P+A F Sbjct 239 -----GTANGREEERFCNAVAGEFLVPEELFRAVWNAGIEWES-------NLAPLATRFH 286 Query 315 VSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGKGYV 374 VS RR LG V E Y + + A +E G G++YRN Sbjct 287 VSKLVIGRRAMDLGYVTQEQYGLYYQKVLKAFREE-----KGGAGDYYRNATAKNSTRLS 341 Query 375 RAV 377 RAV Sbjct 342 RAV 344 >gi|15837098|ref|NP_297786.1| hypothetical protein XF0496 [Xylella fastidiosa 9a5c] gi|9105347|gb|AAF83306.1|AE003898_18 conserved hypothetical protein [Xylella fastidiosa 9a5c] Length=391 Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 114/396 (29%), Positives = 178/396 (45%), Gaps = 37/396 (9%) Query 24 VESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSLAVF 83 + SV++WARE G + AAR R+AAWE GE +PT Q+ + A +K +AVF Sbjct 16 ITPSVVQWAREHAGYSIDDAARHF----KRIAAWEAGEALPTYVQVERMATRFKIPVAVF 71 Query 84 FLSEPPEGFDTLRDFRRL---DGAASGQWTPGLHEEFRRAHTQRDFALELADAED---RE 137 F +PP + FR L D AA + L RR + EL D+++ R Sbjct 72 FFPKPPTLPSVEKSFRTLTVEDFAAIPRTVRFL---LRRGQAMQLNLAELNDSKNPAGRV 128 Query 138 IPGAWRLP--LSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIET-SGV 194 I + P +S D+ IA ++R A + VS + V+ E L W T +GV Sbjct 129 ISADLKFPPKVSLDK----IAEKVR-AYLGVS-IEEQVSWKSFEEALEKWREVFATKAGV 182 Query 195 LVLATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEG--LC 252 V + G CLY DE P+I +N S ++F+L HE H++ HT G L Sbjct 183 YVFK---DAFSAPNYFGFCLYDDEFPIIYINNSSTKARQIFTLFHELSHLLFHTSGVDLS 239 Query 253 DVIADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAH 312 D H +R++E CN +AA VL+P +V+ + +++ D + + Sbjct 240 DDHFIDHLGNAERNIEISCNDLAARVLVPDEVL----DNMLKG--TQQIDRSLAEKFSKY 293 Query 313 FGVSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGKG 372 VS E R+L ++ E Y+ E+ A + + ++ GN+Y + LG+ Sbjct 294 LNVSREVIYRKLLDRKLIDAEEYKAAAKEWAAQMKPKDTKS----SGNYYNSQRTYLGQR 349 Query 373 YVRAVTDAHRRRVIDSNTAAIYLDAKVSQIPKLAES 408 Y+ + + D A YL+ K +P AE Sbjct 350 YIDLAFTRYYQHRFDRGQLAEYLNLKPKSLPTFAEK 385 >gi|330987993|gb|EGH86096.1| DNA-binding protein [Pseudomonas syringae pv. lachrymans str. M301315] Length=378 Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 102/350 (30%), Positives = 158/350 (46%), Gaps = 30/350 (8%) Query 22 ASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSLA 81 A V S+L W+RE GL+ ARKL + +R+ WE G+ PT Q +K A V Sbjct 5 AFVNPSILTWSRERAGLSAAQVARKLPVKPERIKEWEAGKARPTFLQAQKWASVAHVPFG 64 Query 82 VFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDRE-IPG 140 FL +PP L D R + +A + + L + + A ++D+ LE A++ + +P Sbjct 65 FLFLPQPPVEQLPLPDLRTVGNSAPLRPSLELLDTVKDAIRKQDWYLEYLHAQEHQPLPF 124 Query 141 AWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLV---- 196 R + + IR+ L V P + +D ++ + A E +GVLV Sbjct 125 VGR--FDSRTPVKTVVSDIRQTL-GVDP---EKSRLDYDKYSRVLIDAAEVAGVLVMRSG 178 Query 197 --LATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDV 254 L K+ + E RG + PV+ +N SD P RLF+L+HE H+ + + G+ D Sbjct 179 IALGNTHRKLEVSEFRGFAISNSLAPVVFINSSDAPTARLFTLMHELAHLWIGSSGVSDA 238 Query 255 IADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAHFG 314 + R E CNA+A L+P ++ RA + E+ +L P+A F Sbjct 239 -----GTANGREEERFCNAVAGEFLVPEELFRAVWNAGIEWES-------NLAPLATRFH 286 Query 315 VSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRN 364 VS RR LG V E Y + + A +E G G++YRN Sbjct 287 VSKLVIGRRAMDLGYVTQEQYGLYYQKVLKAFREE-----KGGAGDYYRN 331 >gi|71733778|ref|YP_277140.1| DNA-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554331|gb|AAZ33542.1| DNA-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320326510|gb|EFW82561.1| DNA-binding protein [Pseudomonas syringae pv. glycinea str. B076] gi|320331424|gb|EFW87365.1| DNA-binding protein [Pseudomonas syringae pv. glycinea str. race 4] Length=378 Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 102/350 (30%), Positives = 158/350 (46%), Gaps = 30/350 (8%) Query 22 ASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSLA 81 A V S+L W+RE GL+ ARKL + +R+ WE G+ PT Q +K A V Sbjct 5 AFVNPSILTWSRERAGLSAAQVARKLPVKPERIKEWEAGKARPTFLQAQKWASVAHVPFG 64 Query 82 VFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDRE-IPG 140 FL +PP L D R + +A + + L + + A ++D+ LE ++ + +P Sbjct 65 FLFLPQPPVEQLPLPDLRTVGNSAPLRPSLELVDTVKDAIRKQDWYLEYLHVQEHQPLPF 124 Query 141 AWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLV---- 196 R + + IR+ L V P + +D ++ A + A E +GVLV Sbjct 125 VGR--FDSRTPVKTVVSDIRQTL-GVDP---EKSRLDYDKYSRALIDAAEVAGVLVMRSG 178 Query 197 --LATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDV 254 L K+ + E RG + PV+ +N SD P RLF+L+HE H+ + + G+ D Sbjct 179 IALGNTHRKLEVSEFRGFAISNSLAPVVFINSSDAPTARLFTLMHELAHLWIGSSGVSDA 238 Query 255 IADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAHFG 314 + R E CNA+A L+P ++ RA + E+ +L P+A F Sbjct 239 -----GTANGREEERFCNAVAGEFLVPEELFRAVWNAGIEWES-------NLAPLATRFH 286 Query 315 VSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRN 364 VS RR LG V E Y + + A +E G G++YRN Sbjct 287 VSKLVIGRRAMDLGYVTQEQYGLYYQKVLKAFREE-----KGGAGDYYRN 331 >gi|28867507|ref|NP_790126.1| DNA-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28850741|gb|AAO53821.1| DNA-binding protein [Pseudomonas syringae pv. tomato str. DC3000] Length=377 Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 107/354 (31%), Positives = 160/354 (46%), Gaps = 32/354 (9%) Query 19 SIPASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKR 78 S A V S+L W+RE GL+ ARKL + +RV WE GE PT Q +K A V Sbjct 2 SQAAFVNPSILTWSRERAGLSAAQVARKLPVKPERVEEWESGEARPTFLQAQKWASVAHV 61 Query 79 SLAVFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDRE- 137 FL +PP L D R + +A + + L + + A ++D+ LE ++R+ Sbjct 62 PFGFLFLLQPPVEQLPLPDLRTVGNSAPLRPSLELLDTVKDAIRKQDWYLEYLHVQERQP 121 Query 138 IPGAWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLV- 196 +P R + + IR+ L V P + +D ++ A + A E +GVLV Sbjct 122 LPFVGR--FDSRTPVKTVVSDIRQTL-GVDP---EKSRLDYDKYSRALIDAAEVAGVLVM 175 Query 197 -----LATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGL 251 L K+ + E RG + PV+ +N SD P RLF+L+HE H+ + + G+ Sbjct 176 RSGIALGNTHRKLEVSEFRGFAISNPLAPVVFINSSDAPTARLFTLMHELAHIWIGSSGV 235 Query 252 CDVIADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYES-LRPVA 310 D + R E CNA+A L+ PE + R+ +S ++ES L +A Sbjct 236 SDA-----GTANGREEERFCNAVAGEFLV--------PEALFRTVWSASIEWESNLATLA 282 Query 311 AHFGVSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRN 364 F VS RR LG V E Y + + A DE G ++YRN Sbjct 283 TRFHVSKLVIGRRAMDLGYVTQEQYGAYYQKILKAFRDE-----KGGAEDYYRN 331 >gi|257482549|ref|ZP_05636590.1| DNA-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330891863|gb|EGH24524.1| DNA-binding protein [Pseudomonas syringae pv. mori str. 301020] gi|331012806|gb|EGH92862.1| DNA-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length=378 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 104/350 (30%), Positives = 158/350 (46%), Gaps = 30/350 (8%) Query 22 ASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSLA 81 A V S+L W+RE GL+ ARKL + +R+ WE G+ PT Q +K A V Sbjct 5 AFVNPSILTWSRERAGLSAAQVARKLPVKPERIKEWEAGKARPTFLQAQKWASVAHVPFG 64 Query 82 VFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALE-LADAEDREIPG 140 FL +PP L D R + +A + + L + + A ++D+ LE L E + +P Sbjct 65 FLFLPQPPVEQLPLPDLRTVGNSAPLRPSLELVDTVKDAIRKQDWYLEYLHVQEHQPLPF 124 Query 141 AWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLV---- 196 R + + IR+ L V P + +D ++ A + A E +GVLV Sbjct 125 VGR--FDSRTPVKTVVSDIRQTL-GVDP---EKSRLDYDKYSRALIDAAEVAGVLVMRSG 178 Query 197 --LATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDV 254 L K+ + E RG + PV+ +N SD P RLF+L+HE H+ + + G+ D Sbjct 179 IALGNTHRKLEVSEFRGFAISNSLAPVVFINSSDAPTARLFTLMHELAHLWIGSSGVSDA 238 Query 255 IADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAHFG 314 + R E CNA+A L+P ++ RA + E+ +L P+A F Sbjct 239 -----GTANGREEERFCNAVAGEFLVPEELFRAVWNAGIEWES-------NLAPLATRFH 286 Query 315 VSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRN 364 VS RR LG V E Y + + A +E G G++YRN Sbjct 287 VSKLVIGRRAMDLGYVTQEQYGLYYQKVLKAFREE-----KGGAGDYYRN 331 >gi|330881250|gb|EGH15399.1| DNA-binding protein [Pseudomonas syringae pv. glycinea str. race 4] Length=378 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 104/350 (30%), Positives = 158/350 (46%), Gaps = 30/350 (8%) Query 22 ASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSLA 81 A V S+L W+RE GL+ ARKL + +R+ WE G+ PT Q +K A V Sbjct 5 AFVNPSILTWSRERAGLSAAQVARKLPVKPERIKEWEAGKARPTFLQAQKWASVAHVPFG 64 Query 82 VFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALE-LADAEDREIPG 140 FL +PP L D R + +A + + L + + A ++D+ LE L E + +P Sbjct 65 FLFLPQPPVEQLPLPDLRTVGNSAPLRPSLELVDTVKDAIRKQDWYLEYLHVQEPQPLPF 124 Query 141 AWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLV---- 196 R + + IR+ L V P + +D ++ A + A E +GVLV Sbjct 125 VGR--FDSRTPVKTVVSDIRQTL-GVDP---EKSRLDYDKYSRALIDAAEVAGVLVMRSG 178 Query 197 --LATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDV 254 L K+ + E RG + PV+ +N SD P RLF+L+HE H+ + + G+ D Sbjct 179 IALGNTHRKLEVSEFRGFAISNSLAPVVFINSSDAPTARLFTLMHELAHLWIGSSGVSDA 238 Query 255 IADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAHFG 314 + R E CNA+A L+P ++ RA + E+ +L P+A F Sbjct 239 -----GTANGREEERFCNAVAGEFLVPEELFRAVWNAGIEWES-------NLAPLATRFH 286 Query 315 VSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRN 364 VS RR LG V E Y + + A +E G G++YRN Sbjct 287 VSKLVIGRRAMDLGYVTQEQYGLYYQKVLKAFREE-----KGGAGDYYRN 331 >gi|242398075|ref|YP_002993499.1| hypothetical protein TSIB_0082 [Thermococcus sibiricus MM 739] gi|242264468|gb|ACS89150.1| hypothetical protein TSIB_0082 [Thermococcus sibiricus MM 739] Length=367 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 107/389 (28%), Positives = 178/389 (46%), Gaps = 27/389 (6%) Query 18 RSIPASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYK 77 +S V +LR RE+ G + A+KLG+ + ++ E + TI QL+ A++YK Sbjct 3 KSPKVEVSPFILRKLRENSGYSVEELAKKLGVSEKKIEDVESSKDSFTITQLKSLAKIYK 62 Query 78 RSLAVFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDRE 137 LA FF + P +L D+R + P RRA D +EL+ + + Sbjct 63 IPLAAFFSEDIPH-IPSLPDYR---INRDKKLNPEAFVAIRRAKYLSDMIVELSGKKSK- 117 Query 138 IPGAWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETS-GVLV 196 P + D ARI + + + +P D Y L + + IE G+L+ Sbjct 118 ------FPTFPENLPPDELARIFRRYLGIGEIP---KLKDSYRTLEFYKNLIEEKLGILI 168 Query 197 LATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDVIA 256 + + D +R L D L VIVLN SD P+ +LFSL HE H++ +EG+C++ Sbjct 169 IEY---PLKNDNVRAFSLKRD-LAVIVLNESDEPKVKLFSLFHEIAHLLKGSEGICEIDV 224 Query 257 DAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAHFGVS 316 D ++ +E C+ AA L+PA ++ E + E + + +A +GVS Sbjct 225 D----SEKFEIERFCDKFAAEFLVPASDLKLEIEKKAKRELSD----DIISELARRYGVS 276 Query 317 AEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGKGYVRA 376 + RL LG + + YR+ + F A +E ++ + +G NW R G+ +R Sbjct 277 KHVMMLRLLNLGYITKDRYRRFKESFDKAKLEELKKKKVSGSRNWERTYFNRAGRLAIRE 336 Query 377 VTDAHRRRVIDSNTAAIYLDAKVSQIPKL 405 V+ A+ R I A+ L+ K+ +L Sbjct 337 VSRAYERGEISFFEASRILNMKIKYAERL 365 >gi|209966401|ref|YP_002299316.1| DNA-binding protein, putative [Rhodospirillum centenum SW] gi|209959867|gb|ACJ00504.1| DNA-binding protein, putative [Rhodospirillum centenum SW] Length=384 Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 122/402 (31%), Positives = 177/402 (45%), Gaps = 48/402 (11%) Query 22 ASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSLA 81 A V +LRWARE GL A A+KLG + V WE G PT Q + A+ Sbjct 4 ALVSPEILRWARERAGLPVDALAKKLGTTAETVLDWEGGAARPTFRQAERFADAAHVPFG 63 Query 82 VFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDREIPGA 141 FL EPPE + D R + A +++ + R ++D+ E EI GA Sbjct 64 YLFLPEPPEEVLPIPDLRTVGDAPRRRFSLDFMDLLRDVLQKQDWYRE----HLIEI-GA 118 Query 142 WRLPLSG----DEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLVL 197 R G D +AA IR L + + ++ P E + A ET+GV V+ Sbjct 119 PRKAFVGRFGPDAQAETVAADIRDTLQIAT---VQRSTRTPEEFITELSEASETAGVWVM 175 Query 198 ATRGGKVA--------IDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTE 249 R G V ++E RG + D P++ +NG D + F+L HE H+ + Sbjct 176 --RTGYVGSNTHRTFTVEEFRGFAIVDDYAPLVFVNGRDAKAAQAFTLAHELAHIWVGQS 233 Query 250 GLCDVIADAHPSTQDRSLEARCNAIAAAVLMPA---DVVRARPEVIVRSETPSSWDYESL 306 G+ + DA P T D +E CN IAA VL+PA D V +R + + E +SW Sbjct 234 GVSNPGLDA-PQTLD--VERFCNIIAAEVLVPAAELDRVWSRTDSV---EANASW----- 282 Query 307 RPVAAHFGVSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAER---ARSAGGGNWYR 363 ++ F VS RR L ++ RAEF A ++ E R S+GGG++Y Sbjct 283 --LSRTFKVSRIVIARRALDLRLID-------RAEFFAFYQQEVRRWQKIESSGGGDFYL 333 Query 364 NTVRDLGKGYVRAVTDAHRRRVIDSNTAAIYLDAKVSQIPKL 405 N GK + RAV ++ + A L K +Q+ L Sbjct 334 NMPVKNGKQFTRAVLNSAMSGHLLLREAGALLHMKPAQVKDL 375 >gi|260219901|emb|CBA26897.1| hypothetical protein Csp_G38930 [Curvibacter putative symbiont of Hydra magnipapillata] Length=380 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 113/382 (30%), Positives = 163/382 (43%), Gaps = 57/382 (14%) Query 17 MRSIPASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVY 76 M S A + +LRWAR G AA G+ +++ WE+GE PT Q + A+ Sbjct 1 MASPHAHINPEMLRWARGRVGFDIGRAAAAAGVKPEQLERWEMGEDQPTFRQAQSIAQAL 60 Query 77 KRSLAVFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDR 136 FFL E P L D R + G G+ + L E ++A ++ + LE + Sbjct 61 HAPFGFFFLPEAPAEDPLLPDLRTVGGRPVGKPSVDLLETVKQALQRQAWFLEFQQEQ-- 118 Query 137 EIPGAWRLPLSG----DEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAW------- 185 G LP G D + ++AA IR L VD + N W Sbjct 119 ---GLTPLPFVGKFNLDASPKEVAADIRAVL-----------GVDVEQGQNQWDQYQRAL 164 Query 186 VSAIETSGVLVLATRGG--------KVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSL 237 + E +GVLV+ R G K+ + E RG + PV+ +N +D RLF+L Sbjct 165 IRGAENAGVLVM--RSGIVSNNTRRKLDVSEFRGFAISHPLAPVVFINAADAATARLFTL 222 Query 238 LHEFVHVVLHTEGLCDVIADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSET 297 LHE H+ + G+ + S R E CNA+A L PA+V RA +++ Sbjct 223 LHELAHIWFGSSGISN-----SESGNTRQEEVACNAVAGEFLAPAEVFRAL-WANGQADL 276 Query 298 PSSWDYESLRPVAAHFGVSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSA- 356 P+ L +A F VS RR LG++ Y +F A E ER R A Sbjct 277 PT-----RLAELARRFHVSQLVIARRALDLGLLDRNTYN----DFYLA---ELERFRQAE 324 Query 357 -GGGNWYRNTVRDLGKGYVRAV 377 GG++YRN V + + RAV Sbjct 325 SKGGSFYRNAVSKNSERFARAV 346 >gi|332665218|ref|YP_004448006.1| hypothetical protein Halhy_3274 [Haliscomenobacter hydrossis DSM 1100] gi|332334032|gb|AEE51133.1| protein of unknown function DUF955 [Haliscomenobacter hydrossis DSM 1100] Length=389 Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 103/408 (26%), Positives = 181/408 (45%), Gaps = 41/408 (10%) Query 22 ASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSLA 81 A + VL+WARE+ ++ AA K+ + +++ WE G +PTI Q A+ Y+R A Sbjct 5 AYITPKVLKWARETAHMSADVAASKVSVSAEKLQEWEEGISLPTIHQAENLAKAYRRPFA 64 Query 82 VFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDREIPGA 141 +FFL + P F L+DFR+ D G + + E ++ Q + L + +P Sbjct 65 MFFLPDIPNDFLPLQDFRKKDARPLGTASAFIIREMQQ--KQEWISEMLQENLGEPLPFV 122 Query 142 WRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEH----LNAWVSAIETSGVLVL 197 R ++ D EV+ I V ++ ++ + W+ E +G+ V Sbjct 123 GRYTINTDPR-------------EVADDIIKVLKINHAQYTGNVIKDWIDKAEANGIFVS 169 Query 198 ATR--GGKVAID--EMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCD 253 T ++ +D E++G + P I +N D +LF+L+HE H+ + G+ + Sbjct 170 RTSFIHSRLKLDSEEIQGFVIADVYAPFIFINSDDWAAAQLFTLVHELAHIWIAESGISN 229 Query 254 --VIADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAA 311 I+ H + +E CN +AA LMP+ ++ I R +S +S+ VA Sbjct 230 ETEISTGHKD-KLHPVELFCNEVAANALMPSALMNN----IDRKLLATS---KSVFNVAK 281 Query 312 HFGVSAEAFLRRLSTLGIVPVEVYRQRRAEF--------IAAHEDEAERARSAGGGNWYR 363 GVS+ A R L ++ Y + + E E ++ S GG N+Y Sbjct 282 KLGVSSIALAVRALNLQLISTIHYHKLKNEIELDFLEFKKKEEEKMEKQKTSEGGPNYYM 341 Query 364 NTVRDLGKGYVRAVTDAHRRRVIDSNTAAIYLDAKVSQIPKLAESAEL 411 ++ GK + + V DA R +I+ A++ L+ K ++ L L Sbjct 342 LQLQKNGKLFTQMVLDAFRGGLIEPTLASLLLNVKTNKFSSLESRMNL 389 >gi|83591876|ref|YP_425628.1| hypothetical protein Rru_A0537 [Rhodospirillum rubrum ATCC 11170] gi|83574790|gb|ABC21341.1| Protein of unknown function DUF955 [Rhodospirillum rubrum ATCC 11170] Length=419 Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 104/408 (26%), Positives = 172/408 (43%), Gaps = 26/408 (6%) Query 23 SVESSVLRWARESCGLTEVAAARKLGLPD-------DRVAAWEVGEVVPTIAQLRKAAEV 75 ++ +L WARES GL AA +LG+P +++ E G+ PT A L K + V Sbjct 6 NINPGILVWARESAGLGLEEAAHRLGIPSSQRKTAVEKLREIEAGQTFPTRALLSKFSAV 65 Query 76 YKRSLAVFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAED 135 Y+R L F++ EPP DFR L SG+ L R +++ L + E+ Sbjct 66 YRRPLITFYMKEPPRKGLRGEDFRTLSTPVSGRENAVLDALLRDVRARQEMVKSLLEDEE 125 Query 136 REIPGAWRLPLSGDEADADIAARIRKALIEV---SPLPIP-----VASVDPYEHLNAWVS 187 P LP G D + A+ + P P D ++ L Sbjct 126 EARP----LPFVGSAKREDGVGAVVNAIAKTLGYDPDAQPRGRRGTGVDDLFKDLRTRAE 181 Query 188 AIETSGVLV--LATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVV 245 + +L+ L +R ++ RG + P +++N D R F+LLHE H+ Sbjct 182 GVGIFVLLMGDLGSRHSTISEAVFRGFTIADKIAPFVIINDRDARAARSFTLLHELAHLW 241 Query 246 LHTEGLCDVIADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYES 305 L G+ + A S++ +E CN +A L+P+ + RPE++ + ++ + Sbjct 242 LGQTGVSGAVETAEISSRVGVIERFCNDVAGEFLLPSAAFKDRPEMLEAATKDAA--HRV 299 Query 306 LRPVAAHFGVSAEAFLRRLSTLGIVPVEVYRQRRAEFIA---AHEDEAERARSAGGGNWY 362 + +A + VS +L+ +G + +Y+ A+F A A +D AE + GG ++Y Sbjct 300 VSDLARTWSVSESMMAYKLARIGWIGGALYQDLAADFAARWQARKDRAEENKKEGGPSYY 359 Query 363 RNTVRDLGKGYVRAVTDAHRRRVIDSNTAAIYLDAKVSQIPKLAESAE 410 LG V V R +I AA L K + L + E Sbjct 360 VVKRFKLGDALVDVVRRTLRDNLITHTKAAKVLGVKPGSVDPLIRNFE 407 >gi|336314470|ref|ZP_08569388.1| Putative Zn peptidase [Rheinheimera sp. A13L] gi|335881251|gb|EGM79132.1| Putative Zn peptidase [Rheinheimera sp. A13L] Length=379 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 109/399 (28%), Positives = 175/399 (44%), Gaps = 32/399 (8%) Query 22 ASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSLA 81 A + ++L WARE G A KL + + +V+ WE GE T Q A+ Sbjct 4 AKINKAMLTWARERSGYALPEFAHKLNVTEQKVSEWEAGEREITFVQAMAFADKAHVPFG 63 Query 82 VFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADA---EDREI 138 FLS+PP + D R +D A + + L + + +D+ + A + ++ Sbjct 64 FLFLSQPPVENLPIPDLRTVDSAELKRPSAELIDLLKNMLECQDWYRDYARNQLLQPIDV 123 Query 139 PGAWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLV-- 196 G++R ++ A + A +R L + P P D Y L V IET G+LV Sbjct 124 VGSFR----PEQGVAAVVADMRTKL-NIPPHPKRGNWTDYYRDL---VQRIETLGILVMR 175 Query 197 ---LATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCD 253 L +++E RG + + P+I +N +D P RLF+L+HE H+ + G+ D Sbjct 176 QSSLGHHSRPFSVEEFRGFAMCDEFAPIIFVNHADAPGARLFTLIHELCHIWIGQTGISD 235 Query 254 VIADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAHF 313 A+ H R+ E CNA+AA L+P D +A + RS+ W ++L + AHF Sbjct 236 GDANNH-----RAEERFCNAVAAEFLVPTDEFQA----LWRSDY-DHWQ-QNLPDLEAHF 284 Query 314 GVSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDE-AERARSAGGGNWYRNTVRDLGKG 372 VS A R+ TL ++ Y FI A D ER S G +++ + + Sbjct 285 HVSPWALARKALTLELISQGEY----GAFIKAQIDAFKEREASGSGPGYFKTKKAQISQL 340 Query 373 YVRAVTDAHRRRVIDSNTAAIYLDAKVSQIPKLAESAEL 411 + +AV + A L K + + K A+ L Sbjct 341 FSKAVVSEALNGKLLLRDAGWMLGMKPASVAKFAQELGL 379 >gi|121610481|ref|YP_998288.1| hypothetical protein Veis_3552 [Verminephrobacter eiseniae EF01-2] gi|121555121|gb|ABM59270.1| protein of unknown function DUF955 [Verminephrobacter eiseniae EF01-2] Length=385 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 102/369 (28%), Positives = 167/369 (46%), Gaps = 42/369 (11%) Query 23 SVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSLAV 82 ++ +L WARE GL E+A AR+ ++ WE G+ PT+ QL A + Sbjct 8 AMNPGLLSWARERAGLDELALARRF----PKLTEWEAGKAQPTLRQLEDFAHAVHIPIGY 63 Query 83 FFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDREIPGAW 142 FL +P + + DFR L A + +P L + ++D+ + A +P Sbjct 64 LFLPQPVQEALPIPDFRTLADHAITRPSPNLLDMLYLCQQRQDWYRD--HALTHALPA-- 119 Query 143 RLPLSGDEADADIAARIRKALIEVSPLPIPVAS--VDPYEHLNAWVSAIETSGVLVLATR 200 L G + D A + +AL + L + + E L ++ + E +GVLV+A+ Sbjct 120 -LDFIGSASTGDDPATVAQALSKTLQLSLAQRQQLSNWSETLRQFMVSAEKAGVLVMASS 178 Query 201 ------GGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDV 254 K+ + E RG L + P+I LN +D ++F+L HE H+ L G+ D Sbjct 179 IVGSNIHRKLDVREFRGFALVDNLAPLIFLNAADSKAAQMFTLAHEMAHLWLGESGVSDT 238 Query 255 IADAHPSTQDRSLEARCNAIAAAVLMPADVVRA--RPEVIVRSETPSSWDYESLRPVAAH 312 A P ++++E CNA+AA +LMP RA +PE+ + E ++ +A Sbjct 239 EAGRLP---EQAIERWCNAVAAELLMPMRATRAAYQPELPLP---------EEIQRLARQ 286 Query 313 FGVSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSA----GGGNWYRNTVRD 368 F VS LRRL G + V Q + ++ +R ++ GGG++YR Sbjct 287 FKVSTLVVLRRLFDAGFITEAVLWQN-------YHEQLQRIQALDVRRGGGDFYRTLAAR 339 Query 369 LGKGYVRAV 377 G + RAV Sbjct 340 TGTRFARAV 348 >gi|288560902|ref|YP_003424388.1| hypothetical protein mru_1646 [Methanobrevibacter ruminantium M1] gi|288543612|gb|ADC47496.1| hypothetical protein mru_1646 [Methanobrevibacter ruminantium M1] Length=338 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 83/275 (31%), Positives = 136/275 (50%), Gaps = 27/275 (9%) Query 22 ASVESSVLRWARESCGLTEVAAARKLGLPDD---RVAAWEVGEVVPTIAQLRKAAEVYKR 78 A++ +++ WAR+ G + LP D + +WE GE PT QLRKA++ + Sbjct 5 ANINPAMMLWARKRAGYIN---GFEEDLPKDIKSKYKSWESGEEKPTWTQLRKASKKFCL 61 Query 79 SLAVFFLSEPPE--GFDTLRDFRRLDG-AASGQWTPGLHEEFRRAHTQRDFALELADAED 135 A FFL + PE F + ++R+LD +P L ++ R++ ++R+ L+L + Sbjct 62 PSAFFFLEKVPEDDDFPKMINYRKLDADDIFENNSPSLIKQIRKSQSRREHYLDLLYELE 121 Query 136 REIPGAWRLPLSGDEADADIAARIRKAL---IEVSPLPI-PVASVDP--YEHLNAWVSAI 189 IP ++ + G ++ IR+ L +E I S D Y LN W I Sbjct 122 ENIP-SFEI-YEGSLNKKHVSNYIREKLGISLETQKTWIRKNKSKDSRHYNFLNKWKEII 179 Query 190 ETS-GVLVLATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHT 248 GVL+ + G VA++EMRG+C++ E+P+I+LNG D R+FSL HE H++L Sbjct 180 TRKIGVLIFESEG--VALNEMRGLCIFHKEVPIILLNGKDSVNGRIFSLFHELTHLLLGQ 237 Query 249 EGLCDVIADAHPSTQDRSLEARCNAIAAAVLMPAD 283 +C ++ E NA+A L+P + Sbjct 238 SAICG-------DDENIDEEIFYNAVAGEFLVPNE 265 >gi|330957261|gb|EGH57521.1| DNA-binding protein [Pseudomonas syringae pv. maculicola str. ES4326] Length=358 Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 103/341 (31%), Positives = 149/341 (44%), Gaps = 30/341 (8%) Query 44 ARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSLAVFFLSEPPEGFDTLRDFRRLDG 103 ARKL + +RV WE GE PT Q +K A V FL PP L D R + Sbjct 7 ARKLPVKPERVEEWEAGEAKPTFLQAQKWASVAHVPFGFLFLLHPPVEPLPLLDLRTVGN 66 Query 104 AASGQWTPGLHEEFRRAHTQRDFALELADAEDREIPGAWRLPLSGDEADADIAARIRKAL 163 +A + + L + + A ++D+ LE ++++ P A+ + IR+ L Sbjct 67 SAPLRPSLELLDTVKDAIRKQDWYLEYLYNQEQQ-PLAFVGRFDSRSPVKAVVNDIRQTL 125 Query 164 IEVSPLPIPVASVDPYEHLNAWVSAIETSGVLVLAT------RGGKVAIDEMRGMCLYFD 217 V P + +D ++ A + A E +GVLV+ T K+ + E RG + Sbjct 126 -GVDP---ETSRLDYDKYNRALIDAAEMAGVLVMRTGIALGNTHRKLEVSEFRGFAISNP 181 Query 218 ELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDVIADAHPSTQDRSLEARCNAIAAA 277 PV+ +N SD P RLF+L+HE H+ + + G+ D + R E CNA+A Sbjct 182 LAPVVFINSSDAPTARLFTLMHELAHIWIGSSGVSDA-----STLNGREEERFCNAVAGE 236 Query 278 VLMPADVVRARPEVIVRSETPSSWDYES-LRPVAAHFGVSAEAFLRRLSTLGIVPVEVYR 336 L+ PE RS S ++ES L P+A F VS RR LG V E Y Sbjct 237 FLV--------PEERFRSLWSSGVEWESNLAPLATRFHVSKLVIGRRALDLGFVTQEQYG 288 Query 337 QRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGKGYVRAV 377 + A +DE G GN+YRN RAV Sbjct 289 AYYQRILKAFQDE-----KGGAGNYYRNATAKNSTRLSRAV 324 >gi|320161537|ref|YP_004174761.1| hypothetical protein ANT_21350 [Anaerolinea thermophila UNI-1] gi|320161801|ref|YP_004175026.1| hypothetical protein ANT_24000 [Anaerolinea thermophila UNI-1] gi|319995390|dbj|BAJ64161.1| hypothetical protein ANT_21350 [Anaerolinea thermophila UNI-1] gi|319995655|dbj|BAJ64426.1| hypothetical protein ANT_24000 [Anaerolinea thermophila UNI-1] Length=401 Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 104/401 (26%), Positives = 169/401 (43%), Gaps = 44/401 (10%) Query 24 VESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSLAVF 83 + S+L+WARE L ARK G+ + + +WE GE PT Q K A Sbjct 15 ITPSLLKWARERSLLDFNTLARKTGVKPEVLQSWEQGETAPTYRQAEKLAHALHIPFGYL 74 Query 84 FLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDREIPGAWR 143 FLS+PP + DFRRL + G+++P L A ++ + E E G Sbjct 75 FLSQPPFAPSAVPDFRRLPESQIGRFSPELESVLNDAKRKQAWLHEWRVEE-----GFSP 129 Query 144 LPLSGDEADADIAARIRKALIEVSPLPIPVAS--VDPYEHLNAWVSAIETSGV------L 195 LP G + D + + + V LP P A EHL V E +G+ + Sbjct 130 LPFIGKFSPEDSPQTVAEQIRSVLDLPSPTAKGLYSWNEHLQKLVKHAEKAGIAVIRNGV 189 Query 196 VLATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDVI 255 VL+ ++++E RG L + PVI +N D ++F+L HE H+ + G+ + + Sbjct 190 VLSDNRRPLSVEEFRGFNLPDNYAPVIFINAQDSIAGQIFTLAHELAHLWIGAGGISNPL 249 Query 256 ADAHPSTQDRSLEARCNAIAAAVLMPADV--------VRARPEVIVRSETPSSWDYESLR 307 +P + E CN +AA +L+P + PE++ ++ Sbjct 250 TADNPLDTSET-ERFCNRVAAELLLPQNPFLEHWPSGTTTLPEILNAAQQ---------- 298 Query 308 PVAAHFGVSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERA----RSAGGGNWYR 363 +A F VSA A L R L + ++R AA+E+ + + GGG++Y Sbjct 299 -LAREFKVSAPAVLLRACELNRLDAPLFR-------AAYEEIYRQVIPLRKKTGGGSFYA 350 Query 364 NTVRDLGKGYVRAVTDAHRRRVIDSNTAAIYLDAKVSQIPK 404 + V V A R+ + AA L+ ++ + K Sbjct 351 TWQARNSQTVVTEVLQALRQGKVLYRDAARLLNTNLATLEK 391 >gi|333997747|ref|YP_004530359.1| hypothetical protein TREPR_2738 [Treponema primitia ZAS-2] gi|333741223|gb|AEF86713.1| conserved hypothetical protein [Treponema primitia ZAS-2] Length=383 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 97/362 (27%), Positives = 155/362 (43%), Gaps = 35/362 (9%) Query 24 VESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRK-AAEVYKRSLAV 82 V +L+WARE+ G+ AR++ P + + WE G PT L A VY+R +AV Sbjct 7 VNKEILKWARETIGMDIAEVARRVKKPAEIIKEWEDGISSPTYPMLENLAYNVYRRPVAV 66 Query 83 FFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDREIPGAW 142 FF PE +T DFR L G PG+ + +R+A T + L LA+ + P Sbjct 67 FFFPAVPEEKNTNADFRTLPGEVVDTMPPGIIKIYRKAKT---YQLNLAELYENRKPVEK 123 Query 143 RL--PLSGDE-ADADIAARIRKALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLVLAT 199 L D + D A+ +A + + + + V D + L W A+ G+ + Sbjct 124 SLLDIFKMDSLTNVDQLAQDIRAFLGIDMVKLDVCKTDD-DALKLWRDALAHKGIFIFKD 182 Query 200 RGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEFVHVVLHTEGLCDVIADAH 259 +E G+C+Y PVI LN ++F++ HE H++L++ G+ DA Sbjct 183 ---AFFNNEFSGLCVYDAVYPVIFLNNIMPKTRQIFTIFHELGHLLLNSGGI-----DAP 234 Query 260 PSTQDRSL-------EARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAH 312 +R L E +CN A ++ P A P S D ++ +A Sbjct 235 SENFNRRLTGDYSRIEQKCNNFAGELIFPKSFFAALG-------VPFSED--AVIELANI 285 Query 313 FGVSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGKG 372 + VS E LR+ G + Y ++ + +R +S GGN Y LG+ Sbjct 286 YKVSREVVLRKYLDTGQIDFSAYTGLTDKWAFEY---FKRRKSKPGGNPYLTKKAYLGET 342 Query 373 YV 374 Y+ Sbjct 343 YI 344 Lambda K H 0.321 0.135 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 834633681336 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40