BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv2520c Length=75 Score E Sequences producing significant alignments: (Bits) Value gi|15609657|ref|NP_217036.1| hypothetical protein Rv2520c [Mycob... 144 5e-33 gi|118619047|ref|YP_907379.1| hypothetical protein MUL_3810 [Myc... 101 4e-20 gi|145223123|ref|YP_001133801.1| hypothetical protein Mflv_2536 ... 94.4 5e-18 gi|183983927|ref|YP_001852218.1| hypothetical protein MMAR_3955 ... 89.4 2e-16 gi|2222711|emb|CAB09906.1| hypothetical protein [Mycobacterium l... 89.0 2e-16 gi|15827133|ref|NP_301396.1| hypothetical protein ML0425 [Mycoba... 88.6 3e-16 gi|333990028|ref|YP_004522642.1| hypothetical protein JDM601_138... 87.8 4e-16 gi|240170999|ref|ZP_04749658.1| hypothetical protein MkanA1_1693... 85.9 2e-15 gi|342857906|ref|ZP_08714562.1| hypothetical protein MCOL_03490 ... 83.6 8e-15 gi|108800609|ref|YP_640806.1| hypothetical protein Mmcs_3643 [My... 82.4 2e-14 gi|41408426|ref|NP_961262.1| hypothetical protein MAP2328c [Myco... 82.0 3e-14 gi|254823135|ref|ZP_05228136.1| hypothetical protein MintA_24615... 80.9 6e-14 gi|254774482|ref|ZP_05215998.1| hypothetical protein MaviaA2_074... 80.1 1e-13 gi|296170412|ref|ZP_06852000.1| conserved hypothetical protein [... 80.1 1e-13 gi|118466181|ref|YP_880888.1| hypothetical protein MAV_1655 [Myc... 79.0 2e-13 gi|118467507|ref|YP_889010.1| hypothetical protein MSMEG_4752 [M... 77.4 6e-13 gi|262201936|ref|YP_003273144.1| hypothetical protein Gbro_1998 ... 75.5 2e-12 gi|169628607|ref|YP_001702256.1| hypothetical protein MAB_1516 [... 75.1 3e-12 gi|331695377|ref|YP_004331616.1| hypothetical protein Psed_1525 ... 73.2 1e-11 gi|120405073|ref|YP_954902.1| hypothetical protein Mvan_4119 [My... 71.6 4e-11 gi|324998292|ref|ZP_08119404.1| hypothetical protein PseP1_05968... 64.7 5e-09 gi|134097843|ref|YP_001103504.1| hypothetical protein SACE_1254 ... 64.7 5e-09 gi|302529701|ref|ZP_07282043.1| predicted protein [Streptomyces ... 64.7 5e-09 gi|343924712|ref|ZP_08764254.1| hypothetical protein GOALK_023_0... 64.3 6e-09 gi|256375171|ref|YP_003098831.1| hypothetical protein Amir_1029 ... 63.9 7e-09 gi|237785971|ref|YP_002906676.1| hypothetical protein ckrop_1393... 62.4 2e-08 gi|258651928|ref|YP_003201084.1| hypothetical protein Namu_1705 ... 62.0 3e-08 gi|312140425|ref|YP_004007761.1| hypothetical protein REQ_30730 ... 61.6 4e-08 gi|172041129|ref|YP_001800843.1| hypothetical protein cur_1449 [... 61.2 5e-08 gi|226360545|ref|YP_002778323.1| hypothetical protein ROP_11310 ... 61.2 6e-08 gi|38234412|ref|NP_940179.1| hypothetical protein DIP1842 [Coryn... 60.5 9e-08 gi|111018427|ref|YP_701399.1| hypothetical protein RHA1_ro01422 ... 60.1 1e-07 gi|227548673|ref|ZP_03978722.1| conserved hypothetical protein [... 60.1 1e-07 gi|284989920|ref|YP_003408474.1| hypothetical protein Gobs_1368 ... 59.3 2e-07 gi|325675963|ref|ZP_08155646.1| hypothetical protein HMPREF0724_... 59.3 2e-07 gi|300789512|ref|YP_003769803.1| hypothetical protein AMED_7693 ... 57.0 9e-07 gi|259508005|ref|ZP_05750905.1| membrane protein [Corynebacteriu... 56.6 1e-06 gi|25028942|ref|NP_738996.1| hypothetical protein CE2386 [Coryne... 56.6 1e-06 gi|227503977|ref|ZP_03934026.1| conserved hypothetical protein [... 56.6 1e-06 gi|334563360|ref|ZP_08516351.1| hypothetical protein CbovD2_0220... 55.5 3e-06 gi|326385287|ref|ZP_08206949.1| hypothetical protein SCNU_20172 ... 55.5 3e-06 gi|226307355|ref|YP_002767315.1| hypothetical protein RER_38680 ... 52.8 2e-05 gi|213965892|ref|ZP_03394083.1| conserved hypothetical protein [... 52.8 2e-05 gi|300859060|ref|YP_003784043.1| hypothetical protein cpfrc_0164... 52.0 3e-05 gi|337291422|ref|YP_004630443.1| hypothetical protein CULC22_018... 52.0 3e-05 gi|54023232|ref|YP_117474.1| hypothetical protein nfa12650 [Noca... 51.6 4e-05 gi|300780589|ref|ZP_07090444.1| conserved hypothetical protein [... 50.8 7e-05 gi|333921272|ref|YP_004494853.1| hypothetical protein AS9A_3615 ... 50.4 9e-05 gi|257056869|ref|YP_003134701.1| hypothetical protein Svir_28950... 50.1 1e-04 gi|255324296|ref|ZP_05365417.1| conserved hypothetical protein [... 50.1 1e-04 >gi|15609657|ref|NP_217036.1| hypothetical protein Rv2520c [Mycobacterium tuberculosis H37Rv] gi|15842052|ref|NP_337089.1| hypothetical protein MT2596 [Mycobacterium tuberculosis CDC1551] gi|31793701|ref|NP_856194.1| hypothetical protein Mb2549c [Mycobacterium bovis AF2122/97] 76 more sequence titles Length=75 Score = 144 bits (363), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 74/75 (99%), Positives = 75/75 (100%), Gaps = 0/75 (0%) Query 1 VVDRDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGI 60 +VDRDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGI Sbjct 1 MVDRDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGI 60 Query 61 GSVVVVVVIHKIRNR 75 GSVVVVVVIHKIRNR Sbjct 61 GSVVVVVVIHKIRNR 75 >gi|118619047|ref|YP_907379.1| hypothetical protein MUL_3810 [Mycobacterium ulcerans Agy99] gi|118571157|gb|ABL05908.1| conserved membrane protein [Mycobacterium ulcerans Agy99] Length=75 Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 57/75 (76%), Positives = 64/75 (86%), Gaps = 0/75 (0%) Query 1 VVDRDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGI 60 + DRDP+TIKQ+ID RDQLA T+DSL ERANPRRLADD K +VI F+ KP VTV+LVGI Sbjct 1 MADRDPDTIKQDIDVARDQLATTVDSLVERANPRRLADDVKAKVIEFVTKPAVTVTLVGI 60 Query 61 GSVVVVVVIHKIRNR 75 GSVVVVVVI KIRNR Sbjct 61 GSVVVVVVIRKIRNR 75 >gi|145223123|ref|YP_001133801.1| hypothetical protein Mflv_2536 [Mycobacterium gilvum PYR-GCK] gi|315443580|ref|YP_004076459.1| hypothetical protein Mspyr1_19630 [Mycobacterium sp. Spyr1] gi|145215609|gb|ABP45013.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] gi|315261883|gb|ADT98624.1| hypothetical protein Mspyr1_19630 [Mycobacterium sp. Spyr1] Length=74 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 45/74 (61%), Positives = 59/74 (80%), Gaps = 0/74 (0%) Query 1 VVDRDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGI 60 + DRDP+TIK EIDQ R+QLA T+DSLAERANPRR+ADD K+ V+ F+ KP V +SL G+ Sbjct 1 MADRDPDTIKAEIDQAREQLAVTVDSLAERANPRRVADDLKSGVVRFVSKPPVAISLAGV 60 Query 61 GSVVVVVVIHKIRN 74 G ++VV+ I +IR Sbjct 61 GVLLVVLTIRRIRQ 74 >gi|183983927|ref|YP_001852218.1| hypothetical protein MMAR_3955 [Mycobacterium marinum M] gi|183177253|gb|ACC42363.1| conserved membrane protein [Mycobacterium marinum M] Length=75 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 56/75 (75%), Positives = 64/75 (86%), Gaps = 0/75 (0%) Query 1 VVDRDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGI 60 + DRDP+TIKQ+ID RDQLA T+DSL ERANPRRLADD K +VI F+ KP VTV+LVG+ Sbjct 1 MADRDPDTIKQDIDVARDQLATTVDSLVERANPRRLADDVKAKVIEFVTKPAVTVTLVGV 60 Query 61 GSVVVVVVIHKIRNR 75 GSVVVVVVI KIRNR Sbjct 61 GSVVVVVVIRKIRNR 75 >gi|2222711|emb|CAB09906.1| hypothetical protein [Mycobacterium leprae] Length=91 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 44/75 (59%), Positives = 55/75 (74%), Gaps = 0/75 (0%) Query 1 VVDRDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGI 60 V DR P+TIK EID R+Q AAT+DSLAERANPRRLA D K RV+ F R+P V +LV Sbjct 17 VADRHPDTIKLEIDVAREQFAATVDSLAERANPRRLAGDLKARVVEFGRRPAVIAALVSC 76 Query 61 GSVVVVVVIHKIRNR 75 + V+VV+ K++NR Sbjct 77 AVLTVIVVVRKVKNR 91 >gi|15827133|ref|NP_301396.1| hypothetical protein ML0425 [Mycobacterium leprae TN] gi|221229611|ref|YP_002503027.1| hypothetical protein MLBr_00425 [Mycobacterium leprae Br4923] gi|13092681|emb|CAC29933.1| putative membrane protein [Mycobacterium leprae] gi|219932718|emb|CAR70518.1| putative membrane protein [Mycobacterium leprae Br4923] Length=75 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 43/75 (58%), Positives = 55/75 (74%), Gaps = 0/75 (0%) Query 1 VVDRDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGI 60 + DR P+TIK EID R+Q AAT+DSLAERANPRRLA D K RV+ F R+P V +LV Sbjct 1 MADRHPDTIKLEIDVAREQFAATVDSLAERANPRRLAGDLKARVVEFGRRPAVIAALVSC 60 Query 61 GSVVVVVVIHKIRNR 75 + V+VV+ K++NR Sbjct 61 AVLTVIVVVRKVKNR 75 >gi|333990028|ref|YP_004522642.1| hypothetical protein JDM601_1388 [Mycobacterium sp. JDM601] gi|333485996|gb|AEF35388.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=75 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 41/75 (55%), Positives = 58/75 (78%), Gaps = 0/75 (0%) Query 1 VVDRDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGI 60 + +RDP+TIK++ID R+QLA+T+D LA+RANPR LA+ AKTR + + KP V SL GI Sbjct 1 MAERDPDTIKKDIDAAREQLASTVDILADRANPRHLAERAKTRAVEIVTKPAVMASLAGI 60 Query 61 GSVVVVVVIHKIRNR 75 G ++VV+ I ++RNR Sbjct 61 GGLLVVLAIRRVRNR 75 >gi|240170999|ref|ZP_04749658.1| hypothetical protein MkanA1_16935 [Mycobacterium kansasii ATCC 12478] Length=75 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 42/57 (74%), Positives = 47/57 (83%), Gaps = 0/57 (0%) Query 1 VVDRDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSL 57 + DRDP TIKQEID RDQLAAT+DSL ERANPRRLADD K +VI F+ KP VTV+L Sbjct 1 MADRDPETIKQEIDLARDQLAATVDSLVERANPRRLADDVKAKVIEFVTKPAVTVTL 57 >gi|342857906|ref|ZP_08714562.1| hypothetical protein MCOL_03490 [Mycobacterium colombiense CECT 3035] gi|342135239|gb|EGT88405.1| hypothetical protein MCOL_03490 [Mycobacterium colombiense CECT 3035] Length=82 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 41/56 (74%), Positives = 46/56 (83%), Gaps = 0/56 (0%) Query 1 VVDRDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVS 56 V DRDP IKQ+ID RDQLAAT+DSLAERANPRRLADD K RVI F++KP+V S Sbjct 8 VADRDPEAIKQDIDVARDQLAATVDSLAERANPRRLADDLKVRVIGFVQKPVVLAS 63 >gi|108800609|ref|YP_640806.1| hypothetical protein Mmcs_3643 [Mycobacterium sp. MCS] gi|119869748|ref|YP_939700.1| hypothetical protein Mkms_3716 [Mycobacterium sp. KMS] gi|126436233|ref|YP_001071924.1| hypothetical protein Mjls_3656 [Mycobacterium sp. JLS] gi|108771028|gb|ABG09750.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119695837|gb|ABL92910.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126236033|gb|ABN99433.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=73 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 40/60 (67%), Positives = 48/60 (80%), Gaps = 0/60 (0%) Query 1 VVDRDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGI 60 + DRDP IK++ID RDQLA T+DSLAERANPRRLADD KT+VI F+ +P V VSL G+ Sbjct 1 MADRDPEAIKKDIDAARDQLALTVDSLAERANPRRLADDIKTQVIRFVSQPPVAVSLAGV 60 >gi|41408426|ref|NP_961262.1| hypothetical protein MAP2328c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396782|gb|AAS04645.1| hypothetical protein MAP_2328c [Mycobacterium avium subsp. paratuberculosis K-10] Length=86 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 40/56 (72%), Positives = 45/56 (81%), Gaps = 0/56 (0%) Query 1 VVDRDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVS 56 V DRDP IK+EID RDQLA T+DSLAERANPRRLADD K RVI F++KP+V S Sbjct 12 VADRDPEAIKREIDVARDQLATTVDSLAERANPRRLADDLKARVIGFVQKPVVLAS 67 >gi|254823135|ref|ZP_05228136.1| hypothetical protein MintA_24615 [Mycobacterium intracellulare ATCC 13950] Length=75 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 39/56 (70%), Positives = 46/56 (83%), Gaps = 0/56 (0%) Query 1 VVDRDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVS 56 + DRDP IK++ID RDQLAAT+DSLAERANPRRLADD K RVI F++KP+V S Sbjct 1 MADRDPEAIKRDIDVARDQLAATVDSLAERANPRRLADDLKARVIGFVQKPVVLAS 56 >gi|254774482|ref|ZP_05215998.1| hypothetical protein MaviaA2_07403 [Mycobacterium avium subsp. avium ATCC 25291] gi|336461002|gb|EGO39882.1| Protein of unknown function (DUF3618) [Mycobacterium avium subsp. paratuberculosis S397] Length=86 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 39/56 (70%), Positives = 45/56 (81%), Gaps = 0/56 (0%) Query 1 VVDRDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVS 56 V DRDP IK++ID RDQLA T+DSLAERANPRRLADD K RVI F++KP+V S Sbjct 12 VADRDPEAIKRDIDVARDQLATTVDSLAERANPRRLADDLKARVIGFVQKPVVLAS 67 >gi|296170412|ref|ZP_06852000.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894883|gb|EFG74604.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=88 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 40/58 (69%), Positives = 46/58 (80%), Gaps = 0/58 (0%) Query 1 VVDRDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLV 58 V DRDP IK++ID RDQLAAT+DSLA RANPRRLADD K + I F++KP VTVSL Sbjct 14 VADRDPEAIKRDIDVARDQLAATVDSLAVRANPRRLADDLKAKAIEFVKKPAVTVSLA 71 >gi|118466181|ref|YP_880888.1| hypothetical protein MAV_1655 [Mycobacterium avium 104] gi|118167468|gb|ABK68365.1| conserved hypothetical protein [Mycobacterium avium 104] Length=75 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 38/56 (68%), Positives = 45/56 (81%), Gaps = 0/56 (0%) Query 1 VVDRDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVS 56 + DRDP IK++ID RDQLA T+DSLAERANPRRLADD K RVI F++KP+V S Sbjct 1 MADRDPEAIKRDIDVARDQLATTVDSLAERANPRRLADDLKARVIGFVQKPVVLAS 56 >gi|118467507|ref|YP_889010.1| hypothetical protein MSMEG_4752 [Mycobacterium smegmatis str. MC2 155] gi|118168794|gb|ABK69690.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=75 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 36/57 (64%), Positives = 47/57 (83%), Gaps = 0/57 (0%) Query 1 VVDRDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSL 57 + +RDP TIK+EID+ RD+LA T+DSLAERANP+R+ADD + V+ F+RKP VT SL Sbjct 1 MANRDPETIKREIDEARDRLALTVDSLAERANPQRVADDIRAAVVGFIRKPAVTASL 57 >gi|262201936|ref|YP_003273144.1| hypothetical protein Gbro_1998 [Gordonia bronchialis DSM 43247] gi|262085283|gb|ACY21251.1| hypothetical protein Gbro_1998 [Gordonia bronchialis DSM 43247] Length=74 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 36/68 (53%), Positives = 52/68 (77%), Gaps = 0/68 (0%) Query 5 DPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGIGSVV 64 D + I+QEI + R+ LA T+D+LAER +P+RLADDAKT+ +A L P V SL G+G++V Sbjct 4 DTDRIEQEIAKAREDLAHTLDALAERTSPQRLADDAKTKALATLNTPAVKYSLAGVGALV 63 Query 65 VVVVIHKI 72 +V+VI K+ Sbjct 64 LVLVIRKV 71 >gi|169628607|ref|YP_001702256.1| hypothetical protein MAB_1516 [Mycobacterium abscessus ATCC 19977] gi|169240574|emb|CAM61602.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=78 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 34/58 (59%), Positives = 46/58 (80%), Gaps = 0/58 (0%) Query 4 RDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGIG 61 RDP IK +ID+ RDQLAAT+D+L++RANP+RLA+DAK V+A L KP V +++G G Sbjct 3 RDPEAIKADIDKARDQLAATVDTLSDRANPQRLAEDAKASVLATLNKPAVKFTILGFG 60 >gi|331695377|ref|YP_004331616.1| hypothetical protein Psed_1525 [Pseudonocardia dioxanivorans CB1190] gi|326950066|gb|AEA23763.1| hypothetical protein Psed_1525 [Pseudonocardia dioxanivorans CB1190] Length=73 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 31/69 (45%), Positives = 50/69 (73%), Gaps = 0/69 (0%) Query 4 RDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGIGSV 63 RDP I++EI++TRDQLA ++D+L ERA+P+R D K +V A L P + +L+G+G+V Sbjct 3 RDPEAIQREIEKTRDQLAESLDALTERAHPKRFVDQGKQQVAAKLEDPKIKYALIGVGAV 62 Query 64 VVVVVIHKI 72 + + V+ K+ Sbjct 63 LALAVLRKL 71 >gi|120405073|ref|YP_954902.1| hypothetical protein Mvan_4119 [Mycobacterium vanbaalenii PYR-1] gi|119957891|gb|ABM14896.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=75 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 36/54 (67%), Positives = 43/54 (80%), Gaps = 0/54 (0%) Query 1 VVDRDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVT 54 + DRDP+TIK EIDQ R+QLA T+DSLA RANPRR+ADD K VI F++KP V Sbjct 1 MADRDPDTIKAEIDQAREQLAITVDSLAVRANPRRIADDIKAGVIRFVQKPQVA 54 >gi|324998292|ref|ZP_08119404.1| hypothetical protein PseP1_05968 [Pseudonocardia sp. P1] Length=74 Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 29/72 (41%), Positives = 49/72 (69%), Gaps = 0/72 (0%) Query 1 VVDRDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGI 60 +V RDP +I+ EI+QTRD LA ++D+LA+RANP+ L + K +V L P + +L+ + Sbjct 1 MVARDPESIQHEIEQTRDALAESLDALADRANPKNLIEGGKEQVAEKLADPKIKYTLIAV 60 Query 61 GSVVVVVVIHKI 72 G++V + ++ I Sbjct 61 GALVGLALVRSI 72 >gi|134097843|ref|YP_001103504.1| hypothetical protein SACE_1254 [Saccharopolyspora erythraea NRRL 2338] gi|291005521|ref|ZP_06563494.1| hypothetical protein SeryN2_13457 [Saccharopolyspora erythraea NRRL 2338] gi|133910466|emb|CAM00579.1| hypothetical protein SACE_1254 [Saccharopolyspora erythraea NRRL 2338] Length=73 Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 28/69 (41%), Positives = 47/69 (69%), Gaps = 0/69 (0%) Query 4 RDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGIGSV 63 RDP+ I+++I+Q RD LAAT+D L +ANP+R + K + L P V +L+G+G++ Sbjct 3 RDPDAIQRDIEQARDALAATLDELGTKANPKRFVESGKASMQEKLNDPRVRYALIGVGAL 62 Query 64 VVVVVIHKI 72 V +VV+ ++ Sbjct 63 VTIVVVRRL 71 >gi|302529701|ref|ZP_07282043.1| predicted protein [Streptomyces sp. AA4] gi|302438596|gb|EFL10412.1| predicted protein [Streptomyces sp. AA4] Length=98 Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 33/71 (47%), Positives = 48/71 (68%), Gaps = 0/71 (0%) Query 2 VDRDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGIG 61 V RDP TI++EI+Q R LAAT+D L +A+P++LA+ AK V A L P V L+G G Sbjct 26 VARDPETIEREIEQARTALAATLDQLGTKASPQKLAEQAKDGVRAKLDNPKVKYPLIGAG 85 Query 62 SVVVVVVIHKI 72 +V V+++ K+ Sbjct 86 VLVAVLLVRKL 96 >gi|343924712|ref|ZP_08764254.1| hypothetical protein GOALK_023_00220 [Gordonia alkanivorans NBRC 16433] gi|343765392|dbj|GAA11180.1| hypothetical protein GOALK_023_00220 [Gordonia alkanivorans NBRC 16433] Length=73 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 30/53 (57%), Positives = 42/53 (80%), Gaps = 0/53 (0%) Query 5 DPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSL 57 D I+QEI + R+ LA+T+D+LAERANP+RLADDAK++ +A L+KP V S+ Sbjct 4 DTERIEQEIAKAREDLASTLDALAERANPQRLADDAKSKALATLQKPAVMYSI 56 >gi|256375171|ref|YP_003098831.1| hypothetical protein Amir_1029 [Actinosynnema mirum DSM 43827] gi|255919474|gb|ACU34985.1| hypothetical protein Amir_1029 [Actinosynnema mirum DSM 43827] Length=73 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 31/69 (45%), Positives = 45/69 (66%), Gaps = 0/69 (0%) Query 4 RDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGIGSV 63 RDP+ I++EI+Q RD LAAT+D L RANP+R + K V A L P V +L+ +G+V Sbjct 3 RDPDAIQREIEQARDALAATLDELGTRANPQRFVEAGKAGVQAKLDDPRVRYALIAVGAV 62 Query 64 VVVVVIHKI 72 V ++ K+ Sbjct 63 VGFALLRKL 71 >gi|237785971|ref|YP_002906676.1| hypothetical protein ckrop_1393 [Corynebacterium kroppenstedtii DSM 44385] gi|237758883|gb|ACR18133.1| hypothetical protein ckrop_1393 [Corynebacterium kroppenstedtii DSM 44385] Length=94 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 30/72 (42%), Positives = 50/72 (70%), Gaps = 0/72 (0%) Query 4 RDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGIGSV 63 R + I+ ++++TR+QLA+T+D LA+RANP +ADDAK + + ++ P V L+GIG Sbjct 3 RSIDAIQSDLERTRNQLASTLDELADRANPNAIADDAKEKATSLIQDPKVQKVLIGIGVA 62 Query 64 VVVVVIHKIRNR 75 V VV+ +R++ Sbjct 63 VAGVVLLTMRSK 74 >gi|258651928|ref|YP_003201084.1| hypothetical protein Namu_1705 [Nakamurella multipartita DSM 44233] gi|258555153|gb|ACV78095.1| hypothetical protein Namu_1705 [Nakamurella multipartita DSM 44233] Length=73 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 29/69 (43%), Positives = 46/69 (67%), Gaps = 0/69 (0%) Query 4 RDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGIGSV 63 RD TI+ EI++ RD LAA +D L RANP+R+ D + + A L +P V SL+ +G++ Sbjct 3 RDAETIQAEIERARDSLAAAVDELTTRANPKRVVDQGRQTLTATLAEPKVKYSLIAVGAL 62 Query 64 VVVVVIHKI 72 V +VV+ ++ Sbjct 63 VGLVVLRRL 71 >gi|312140425|ref|YP_004007761.1| hypothetical protein REQ_30730 [Rhodococcus equi 103S] gi|311889764|emb|CBH49081.1| conserved hypothetical protein [Rhodococcus equi 103S] Length=73 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 31/69 (45%), Positives = 47/69 (69%), Gaps = 0/69 (0%) Query 4 RDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGIGSV 63 RD I+++I+ R+QLA T+D LA R NP+RL + K V+A L +P V +L+G G+V Sbjct 3 RDTEAIERDIENARNQLAQTLDVLAVRTNPKRLVETTKHTVLAKLNEPAVKAALIGAGAV 62 Query 64 VVVVVIHKI 72 V ++V+ KI Sbjct 63 VGLLVLRKI 71 >gi|172041129|ref|YP_001800843.1| hypothetical protein cur_1449 [Corynebacterium urealyticum DSM 7109] gi|171852433|emb|CAQ05409.1| hypothetical protein cu1449 [Corynebacterium urealyticum DSM 7109] Length=92 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 31/65 (48%), Positives = 49/65 (76%), Gaps = 0/65 (0%) Query 4 RDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGIGSV 63 R + I+++I++TR+QLA T+D LA RA+P+ LADDA+ +V FLR+P V + L G+ + Sbjct 3 RSIDAIERDIERTRNQLAKTLDELAFRADPKNLADDARGQVSDFLREPKVQMVLGGVAAG 62 Query 64 VVVVV 68 VV++V Sbjct 63 VVLLV 67 >gi|226360545|ref|YP_002778323.1| hypothetical protein ROP_11310 [Rhodococcus opacus B4] gi|226239030|dbj|BAH49378.1| hypothetical protein [Rhodococcus opacus B4] Length=73 Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 28/68 (42%), Positives = 46/68 (68%), Gaps = 0/68 (0%) Query 4 RDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGIGSV 63 RD +I++EI+ R+QLA+T+D L R NP+RL ++ K +IA L +P V L+ +G+V Sbjct 3 RDTESIEREIENARNQLASTLDELTVRTNPKRLVENTKRTLIAKLNEPAVKYGLIAVGAV 62 Query 64 VVVVVIHK 71 ++V+ K Sbjct 63 TGLLVLRK 70 >gi|38234412|ref|NP_940179.1| hypothetical protein DIP1842 [Corynebacterium diphtheriae NCTC 13129] gi|38200675|emb|CAE50371.1| Putative membrane protein [Corynebacterium diphtheriae] Length=91 Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 33/73 (46%), Positives = 52/73 (72%), Gaps = 1/73 (1%) Query 4 RDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGIGSV 63 RD N I+++I++TR QLA+T+D +A+R+ P+ DDAK + A +++P V L+GIG+ Sbjct 3 RDINDIQRDIERTRRQLASTLDEIADRSKPQNFVDDAKKQATAKVQEPEVQKILIGIGAA 62 Query 64 VV-VVVIHKIRNR 75 VV +VVI +R R Sbjct 63 VVGLVVIGVMRGR 75 >gi|111018427|ref|YP_701399.1| hypothetical protein RHA1_ro01422 [Rhodococcus jostii RHA1] gi|110817957|gb|ABG93241.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=73 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/68 (42%), Positives = 45/68 (67%), Gaps = 0/68 (0%) Query 4 RDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGIGSV 63 RD +I++EI+ R+QLA+T+D L R NP+RL + K +IA L +P V L+ +G+V Sbjct 3 RDTESIEREIENARNQLASTLDELTVRTNPKRLVESTKRTLIAKLNEPAVKYGLIAVGAV 62 Query 64 VVVVVIHK 71 ++V+ K Sbjct 63 AGLLVLRK 70 >gi|227548673|ref|ZP_03978722.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] gi|227079287|gb|EEI17250.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] Length=91 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/65 (48%), Positives = 45/65 (70%), Gaps = 0/65 (0%) Query 4 RDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGIGSV 63 RD + I+++I++TRDQLA+T+D +A RANP LAD+AK + F + V LVGIG Sbjct 3 RDIDDIERDIERTRDQLASTLDEIAHRANPSTLADNAKDQAKNFFQDETVQKVLVGIGVG 62 Query 64 VVVVV 68 V V++ Sbjct 63 VAVLI 67 >gi|284989920|ref|YP_003408474.1| hypothetical protein Gobs_1368 [Geodermatophilus obscurus DSM 43160] gi|284063165|gb|ADB74103.1| conserved hypothetical protein [Geodermatophilus obscurus DSM 43160] Length=76 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/72 (38%), Positives = 46/72 (64%), Gaps = 0/72 (0%) Query 4 RDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGIGSV 63 RDP I+ EID R+ LAAT+D L R++P+RL + V FL+ P+ ++ +G + Sbjct 3 RDPRQIQLEIDAARESLAATLDQLVYRSSPQRLRAQGQAAVQQFLQTPVGMAAVGAVGLL 62 Query 64 VVVVVIHKIRNR 75 + +V++ K+R+R Sbjct 63 MTLVLVQKVRHR 74 >gi|325675963|ref|ZP_08155646.1| hypothetical protein HMPREF0724_13428 [Rhodococcus equi ATCC 33707] gi|325553201|gb|EGD22880.1| hypothetical protein HMPREF0724_13428 [Rhodococcus equi ATCC 33707] Length=73 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/69 (44%), Positives = 46/69 (67%), Gaps = 0/69 (0%) Query 4 RDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGIGSV 63 RD I+++I+ R+QLA T+D LA R NP+RL + K V+ L +P V +L+G G+V Sbjct 3 RDTEAIERDIENARNQLAQTLDVLAVRTNPKRLVETTKHTVLVKLNEPAVKAALIGAGAV 62 Query 64 VVVVVIHKI 72 V ++V+ KI Sbjct 63 VGLLVLRKI 71 >gi|300789512|ref|YP_003769803.1| hypothetical protein AMED_7693 [Amycolatopsis mediterranei U32] gi|299799026|gb|ADJ49401.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340531167|gb|AEK46372.1| hypothetical protein RAM_39525 [Amycolatopsis mediterranei S699] Length=73 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 30/58 (52%), Positives = 39/58 (68%), Gaps = 0/58 (0%) Query 4 RDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGIG 61 RDP TI++EI+Q R LAAT+D L +A+P++LAD AK V A L P V L+G G Sbjct 3 RDPETIEREIEQARTALAATLDQLTVKADPKKLADAAKDGVRAKLDNPKVKFPLIGAG 60 >gi|259508005|ref|ZP_05750905.1| membrane protein [Corynebacterium efficiens YS-314] gi|259164500|gb|EEW49054.1| membrane protein [Corynebacterium efficiens YS-314] Length=91 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/69 (45%), Positives = 45/69 (66%), Gaps = 0/69 (0%) Query 4 RDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGIGSV 63 R+ + I+++I++TR QLA T+D LAER P L DDAK++ A L+ P V L+G SV Sbjct 3 RNIDDIQRDIERTRRQLANTLDELAERGKPANLVDDAKSQATAKLQDPDVQKILIGAASV 62 Query 64 VVVVVIHKI 72 VV ++ I Sbjct 63 VVGAILFSI 71 >gi|25028942|ref|NP_738996.1| hypothetical protein CE2386 [Corynebacterium efficiens YS-314] gi|23494229|dbj|BAC19196.1| hypothetical protein [Corynebacterium efficiens YS-314] Length=102 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/71 (46%), Positives = 46/71 (65%), Gaps = 0/71 (0%) Query 2 VDRDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGIG 61 V R+ + I+++I++TR QLA T+D LAER P L DDAK++ A L+ P V L+G Sbjct 12 VARNIDDIQRDIERTRRQLANTLDELAERGKPANLVDDAKSQATAKLQDPDVQKILIGAA 71 Query 62 SVVVVVVIHKI 72 SVVV ++ I Sbjct 72 SVVVGAILFSI 82 >gi|227503977|ref|ZP_03934026.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940] gi|227199445|gb|EEI79493.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940] Length=92 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/65 (45%), Positives = 45/65 (70%), Gaps = 0/65 (0%) Query 4 RDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGIGSV 63 RD N I+++I++TR QLA+T+D LA+R+ P+ L DDAK L+ V ++L G+G+ Sbjct 3 RDINDIQRDIERTRRQLASTLDELADRSKPKNLVDDAKGAATEKLQDRNVQMALAGVGAA 62 Query 64 VVVVV 68 VV +V Sbjct 63 VVGLV 67 >gi|334563360|ref|ZP_08516351.1| hypothetical protein CbovD2_02208 [Corynebacterium bovis DSM 20582] Length=92 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 26/65 (40%), Positives = 46/65 (71%), Gaps = 0/65 (0%) Query 4 RDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGIGSV 63 R + I+++I++TR QLA T++ L+ RA+P+ LADDAK + + LR+P V + L G+ + Sbjct 3 RSTDAIQRDIERTRTQLAQTLEELSIRADPKNLADDAKGQAVGVLREPKVQMVLGGVAAG 62 Query 64 VVVVV 68 V +++ Sbjct 63 VALLI 67 >gi|326385287|ref|ZP_08206949.1| hypothetical protein SCNU_20172 [Gordonia neofelifaecis NRRL B-59395] gi|326195996|gb|EGD53208.1| hypothetical protein SCNU_20172 [Gordonia neofelifaecis NRRL B-59395] Length=73 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/64 (52%), Positives = 49/64 (77%), Gaps = 0/64 (0%) Query 9 IKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGIGSVVVVVV 68 I+QEI + R++LA T+D L ER NP+RLADDAK +V+A + +P V L+G+G++V VV+ Sbjct 8 IEQEIAKAREELAGTLDQLVERTNPQRLADDAKVKVVAVVSQPPVKYGLIGVGALVAVVI 67 Query 69 IHKI 72 + KI Sbjct 68 VRKI 71 >gi|226307355|ref|YP_002767315.1| hypothetical protein RER_38680 [Rhodococcus erythropolis PR4] gi|229493975|ref|ZP_04387744.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|226186472|dbj|BAH34576.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] gi|229319044|gb|EEN84896.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=73 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 24/56 (43%), Positives = 39/56 (70%), Gaps = 0/56 (0%) Query 4 RDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVG 59 RD +I++EI++ R+QLA+T+D L R NP+RL ++ K V+A L +P V +L+ Sbjct 3 RDTESIEREIEKARNQLASTLDELTVRTNPKRLVENTKKTVLAKLNEPAVKYALIA 58 >gi|213965892|ref|ZP_03394083.1| conserved hypothetical protein [Corynebacterium amycolatum SK46] gi|213951470|gb|EEB62861.1| conserved hypothetical protein [Corynebacterium amycolatum SK46] Length=93 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/65 (44%), Positives = 44/65 (68%), Gaps = 0/65 (0%) Query 9 IKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGIGSVVVVVV 68 I+++I++ R+QLA T+D L R NP+ +ADDAKTRV+ L +P V +L + ++VV + Sbjct 8 IQRDIERNRNQLARTLDELTVRTNPKNVADDAKTRVLDALNEPKVQAALGVVAALVVGGI 67 Query 69 IHKIR 73 IR Sbjct 68 AMGIR 72 >gi|300859060|ref|YP_003784043.1| hypothetical protein cpfrc_01643 [Corynebacterium pseudotuberculosis FRC41] gi|300686514|gb|ADK29436.1| hypothetical protein cpfrc_01643 [Corynebacterium pseudotuberculosis FRC41] gi|302206762|gb|ADL11104.1| Hypothetical protein CpC231_1642 [Corynebacterium pseudotuberculosis C231] gi|302331315|gb|ADL21509.1| Hypothetical protein Cp1002_1641 [Corynebacterium pseudotuberculosis 1002] gi|308277007|gb|ADO26906.1| Putative membrane protein [Corynebacterium pseudotuberculosis I19] gi|341825446|gb|AEK92967.1| Hypothetical protein CpPAT10_1642 [Corynebacterium pseudotuberculosis PAT10] Length=91 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 27/69 (40%), Positives = 43/69 (63%), Gaps = 0/69 (0%) Query 4 RDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGIGSV 63 RD N I+++I++TR QLA+T+D + +R+ P+ DDAK + L+ P + VGIG Sbjct 3 RDINDIQRDIERTRRQLASTLDEIVDRSKPQNFVDDAKKQATTKLQDPQIQKIFVGIGVA 62 Query 64 VVVVVIHKI 72 V +V+ I Sbjct 63 VAGLVVLGI 71 >gi|337291422|ref|YP_004630443.1| hypothetical protein CULC22_01815 [Corynebacterium ulcerans BR-AD22] gi|334697451|gb|AEG82248.1| hypothetical protein CULC809_01716 [Corynebacterium ulcerans 809] gi|334699728|gb|AEG84524.1| hypothetical protein CULC22_01815 [Corynebacterium ulcerans BR-AD22] Length=91 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 27/69 (40%), Positives = 43/69 (63%), Gaps = 0/69 (0%) Query 4 RDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGIGSV 63 RD N I+++I++TR QLA+T+D + +R+ P+ DDAK + L+ P + L GIG Sbjct 3 RDINDIQRDIERTRRQLASTLDEIVDRSKPQNFVDDAKKQATTKLQDPQIQKILAGIGVA 62 Query 64 VVVVVIHKI 72 V +V+ I Sbjct 63 VAGLVVLGI 71 >gi|54023232|ref|YP_117474.1| hypothetical protein nfa12650 [Nocardia farcinica IFM 10152] gi|54014740|dbj|BAD56110.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=73 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 24/55 (44%), Positives = 40/55 (73%), Gaps = 0/55 (0%) Query 4 RDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLV 58 RD I++EI+ R++LA+T+D +A RA+P+R+ADD K+ V+A L +P + L+ Sbjct 3 RDTERIEREIEDARNRLASTLDEIAVRADPQRIADDTKSMVVAKLNEPKIKYGLI 57 >gi|300780589|ref|ZP_07090444.1| conserved hypothetical protein [Corynebacterium genitalium ATCC 33030] gi|300533575|gb|EFK54635.1| conserved hypothetical protein [Corynebacterium genitalium ATCC 33030] Length=115 Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 28/73 (39%), Positives = 44/73 (61%), Gaps = 0/73 (0%) Query 2 VDRDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGIG 61 V RD N I+++I++TR LA TID +A+R P LA++AK +V ++ V L GIG Sbjct 24 VARDINDIQRDIERTRGNLAQTIDEIADRTRPENLANNAKAQVQNKMKDDKVQKVLAGIG 83 Query 62 SVVVVVVIHKIRN 74 + +V+ + N Sbjct 84 VAIAAIVVINVSN 96 >gi|333921272|ref|YP_004494853.1| hypothetical protein AS9A_3615 [Amycolicicoccus subflavus DQS3-9A1] gi|333483493|gb|AEF42053.1| hypothetical protein AS9A_3615 [Amycolicicoccus subflavus DQS3-9A1] Length=73 Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 24/55 (44%), Positives = 40/55 (73%), Gaps = 0/55 (0%) Query 2 VDRDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVS 56 + RD +I+++I++ R+QLA+T+D L RANPRR+ D+AK + IA +P V ++ Sbjct 1 MSRDTESIERDIERAREQLASTLDELTVRANPRRVLDNAKEKAIAKSEEPEVRIA 55 >gi|257056869|ref|YP_003134701.1| hypothetical protein Svir_28950 [Saccharomonospora viridis DSM 43017] gi|256586741|gb|ACU97874.1| hypothetical protein Svir_28950 [Saccharomonospora viridis DSM 43017] Length=73 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 23/50 (46%), Positives = 40/50 (80%), Gaps = 0/50 (0%) Query 4 RDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIV 53 RDP TI+++I++ R+ LAAT+D ++E+A+P++LAD A++ V A L +P + Sbjct 3 RDPETIERDIEKAREALAATLDRISEKADPKQLADSARSTVQAKLDEPKI 52 >gi|255324296|ref|ZP_05365417.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] gi|311741229|ref|ZP_07715053.1| conserved hypothetical protein [Corynebacterium pseudogenitalium ATCC 33035] gi|255298626|gb|EET77922.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] gi|311303399|gb|EFQ79478.1| conserved hypothetical protein [Corynebacterium pseudogenitalium ATCC 33035] Length=92 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/69 (37%), Positives = 45/69 (66%), Gaps = 0/69 (0%) Query 4 RDPNTIKQEIDQTRDQLAATIDSLAERANPRRLADDAKTRVIAFLRKPIVTVSLVGIGSV 63 R+ I+++I++TR QLA T+D LA+R+ P+ A++AKT L+ V ++L G+G+ Sbjct 3 RNIEDIQRDIERTRRQLAGTLDELAQRSKPQNFANEAKTAATDKLQDRNVQMALGGVGAA 62 Query 64 VVVVVIHKI 72 VV ++ + Sbjct 63 VVGLIAFSV 71 Lambda K H 0.322 0.137 0.365 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 131059142040 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40