BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2525c
Length=240
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609662|ref|NP_217041.1| hypothetical protein Rv2525c [Mycob... 484 7e-135
gi|339295406|gb|AEJ47517.1| hypothetical protein CCDC5079_2327 [... 468 3e-130
gi|339299026|gb|AEJ51136.1| hypothetical protein CCDC5180_2299 [... 449 2e-124
gi|118619053|ref|YP_907385.1| hypothetical protein MUL_3819 [Myc... 444 6e-123
gi|183983935|ref|YP_001852226.1| hypothetical protein MMAR_3963 ... 433 9e-120
gi|240171008|ref|ZP_04749667.1| hypothetical protein MkanA1_1698... 414 8e-114
gi|296170407|ref|ZP_06851995.1| secreted protein [Mycobacterium ... 392 2e-107
gi|15827604|ref|NP_301867.1| hypothetical protein ML1190 [Mycoba... 392 2e-107
gi|254823143|ref|ZP_05228144.1| hypothetical protein MintA_24655... 382 3e-104
gi|41408432|ref|NP_961268.1| hypothetical protein MAP2334c [Myco... 380 9e-104
gi|342857912|ref|ZP_08714568.1| hypothetical protein MCOL_03520 ... 379 2e-103
gi|118464458|ref|YP_880881.1| secreted protein [Mycobacterium av... 379 3e-103
gi|126436239|ref|YP_001071930.1| hypothetical protein Mjls_3662 ... 342 4e-92
gi|333990022|ref|YP_004522636.1| hypothetical protein JDM601_138... 331 7e-89
gi|108800615|ref|YP_640812.1| hypothetical protein Mmcs_3649 [My... 329 2e-88
gi|169628602|ref|YP_001702251.1| hypothetical protein MAB_1511 [... 301 6e-80
gi|226365394|ref|YP_002783177.1| hypothetical protein ROP_59850 ... 288 6e-76
gi|312138829|ref|YP_004006165.1| hypothetical protein REQ_13960 ... 286 3e-75
gi|325676471|ref|ZP_08156149.1| secreted protein [Rhodococcus eq... 285 3e-75
gi|111022886|ref|YP_705858.1| hypothetical protein RHA1_ro05923 ... 285 4e-75
gi|229493877|ref|ZP_04387649.1| secreted protein [Rhodococcus er... 274 6e-72
gi|226307688|ref|YP_002767648.1| hypothetical protein RER_42010 ... 273 1e-71
gi|54026739|ref|YP_120981.1| hypothetical protein nfa47650 [Noca... 273 2e-71
gi|225023112|ref|ZP_03712304.1| hypothetical protein CORMATOL_03... 234 6e-60
gi|145295004|ref|YP_001137825.1| hypothetical protein cgR_0949 [... 233 2e-59
gi|305682082|ref|ZP_07404886.1| Tat pathway signal sequence doma... 233 2e-59
gi|259507125|ref|ZP_05750025.1| secreted protein [Corynebacteriu... 232 3e-59
gi|25027468|ref|NP_737522.1| hypothetical protein CE0912 [Coryne... 231 5e-59
gi|19552062|ref|NP_600064.1| hypothetical protein NCgl0801 [Cory... 231 8e-59
gi|333919698|ref|YP_004493279.1| Secreted protein [Amycolicicocc... 230 1e-58
gi|296393021|ref|YP_003657905.1| hypothetical protein Srot_0592 ... 226 3e-57
gi|317507985|ref|ZP_07965677.1| HpcH/HpaI aldolase/citrate lyase... 223 2e-56
gi|317507988|ref|ZP_07965680.1| TAT pathway signal sequence [Seg... 214 7e-54
gi|296393017|ref|YP_003657901.1| hypothetical protein Srot_0588 ... 214 8e-54
gi|227832601|ref|YP_002834308.1| putative secreted protein [Cory... 213 2e-53
gi|300781730|ref|ZP_07091584.1| secreted protein [Corynebacteriu... 212 3e-53
gi|255324971|ref|ZP_05366078.1| secreted protein [Corynebacteriu... 212 5e-53
gi|319950316|ref|ZP_08024235.1| putative secreted protein [Dietz... 210 2e-52
gi|227548316|ref|ZP_03978365.1| twin-arginine translocation path... 209 2e-52
gi|311740909|ref|ZP_07714736.1| secreted protein [Corynebacteriu... 207 1e-51
gi|227487749|ref|ZP_03918065.1| twin-arginine translocation path... 205 4e-51
gi|337290276|ref|YP_004629297.1| hypothetical protein CULC22_006... 203 2e-50
gi|227542388|ref|ZP_03972437.1| twin-arginine translocation path... 202 3e-50
gi|334696397|gb|AEG81194.1| putative secreted protein [Corynebac... 202 3e-50
gi|227501421|ref|ZP_03931470.1| twin-arginine translocation path... 199 2e-49
gi|300858035|ref|YP_003783018.1| hypothetical protein cpfrc_0061... 199 4e-49
gi|296118301|ref|ZP_06836882.1| secreted protein [Corynebacteriu... 197 8e-49
gi|227504250|ref|ZP_03934299.1| twin-arginine translocation path... 193 2e-47
gi|296393020|ref|YP_003657904.1| hypothetical protein Srot_0591 ... 192 3e-47
gi|38233392|ref|NP_939159.1| hypothetical protein DIP0793 [Coryn... 190 1e-46
>gi|15609662|ref|NP_217041.1| hypothetical protein Rv2525c [Mycobacterium tuberculosis H37Rv]
gi|15842058|ref|NP_337095.1| hypothetical protein MT2601 [Mycobacterium tuberculosis CDC1551]
gi|31793706|ref|NP_856199.1| hypothetical protein Mb2554c [Mycobacterium bovis AF2122/97]
78 more sequence titles
Length=240
Score = 484 bits (1245), Expect = 7e-135, Method: Compositional matrix adjust.
Identities = 240/240 (100%), Positives = 240/240 (100%), Gaps = 0/240 (0%)
Query 1 MSVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAV 60
MSVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAV
Sbjct 1 MSVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAV 60
Query 61 GAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQH 120
GAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQH
Sbjct 61 GAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQH 120
Query 121 ARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSKT 180
ARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSKT
Sbjct 121 ARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSKT 180
Query 181 IDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFGQWA 240
IDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFGQWA
Sbjct 181 IDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFGQWA 240
>gi|339295406|gb|AEJ47517.1| hypothetical protein CCDC5079_2327 [Mycobacterium tuberculosis
CCDC5079]
Length=233
Score = 468 bits (1205), Expect = 3e-130, Method: Compositional matrix adjust.
Identities = 232/233 (99%), Positives = 233/233 (100%), Gaps = 0/233 (0%)
Query 8 VLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAVGAIRYVS 67
+LKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAVGAIRYVS
Sbjct 1 MLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAVGAIRYVS 60
Query 68 DRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQHARRGSEL 127
DRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQHARRGSEL
Sbjct 61 DRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQHARRGSEL 120
Query 128 HAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSKTIDWAVND 187
HAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSKTIDWAVND
Sbjct 121 HAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSKTIDWAVND 180
Query 188 GLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFGQWA 240
GLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFGQWA
Sbjct 181 GLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFGQWA 233
>gi|339299026|gb|AEJ51136.1| hypothetical protein CCDC5180_2299 [Mycobacterium tuberculosis
CCDC5180]
Length=223
Score = 449 bits (1154), Expect = 2e-124, Method: Compositional matrix adjust.
Identities = 222/223 (99%), Positives = 223/223 (100%), Gaps = 0/223 (0%)
Query 18 VLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAVGAIRYVSDRRPGGAWML 77
+LGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAVGAIRYVSDRRPGGAWML
Sbjct 1 MLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAVGAIRYVSDRRPGGAWML 60
Query 78 GKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQHARRGSELHAAAGGPTSA 137
GKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQHARRGSELHAAAGGPTSA
Sbjct 61 GKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQHARRGSELHAAAGGPTSA 120
Query 138 PIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSKTIDWAVNDGLGSYFWQHN 197
PIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSKTIDWAVNDGLGSYFWQHN
Sbjct 121 PIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSKTIDWAVNDGLGSYFWQHN 180
Query 198 WGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFGQWA 240
WGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFGQWA
Sbjct 181 WGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFGQWA 223
>gi|118619053|ref|YP_907385.1| hypothetical protein MUL_3819 [Mycobacterium ulcerans Agy99]
gi|118571163|gb|ABL05914.1| conserved hypothetical secreted protein [Mycobacterium ulcerans
Agy99]
Length=240
Score = 444 bits (1141), Expect = 6e-123, Method: Compositional matrix adjust.
Identities = 214/240 (90%), Positives = 228/240 (95%), Gaps = 0/240 (0%)
Query 1 MSVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAV 60
MSVSRR VLKFAAATPG++GLG +SLRAAP SA SLGTLLDYAAGVIPASQIRAAGAV
Sbjct 1 MSVSRRQVLKFAAATPGLVGLGAAVASLRAAPVSAASLGTLLDYAAGVIPASQIRAAGAV 60
Query 61 GAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQH 120
G+IRYVSDRRPGGAWMLGKPIQ+ EARDL GNGLK+VSCYQYGKGST+DWLGGA+AGV+H
Sbjct 61 GSIRYVSDRRPGGAWMLGKPIQIGEARDLVGNGLKVVSCYQYGKGSTSDWLGGAAAGVRH 120
Query 121 ARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSKT 180
ARRG ELH AAGGP SAPIYAS+DDNPSYEQYKNQIVPYLR+WESVIGHQRTGVYANSKT
Sbjct 121 ARRGVELHTAAGGPPSAPIYASVDDNPSYEQYKNQIVPYLRAWESVIGHQRTGVYANSKT 180
Query 181 IDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFGQWA 240
IDWAV DGLGSYFWQHNWGSPKGYTHPAA+LHQVEIDKRKVGGVGVD+N+ILKPQFGQWA
Sbjct 181 IDWAVRDGLGSYFWQHNWGSPKGYTHPAANLHQVEIDKRKVGGVGVDINEILKPQFGQWA 240
>gi|183983935|ref|YP_001852226.1| hypothetical protein MMAR_3963 [Mycobacterium marinum M]
gi|183177261|gb|ACC42371.1| conserved hypothetical secreted protein [Mycobacterium marinum
M]
Length=240
Score = 433 bits (1114), Expect = 9e-120, Method: Compositional matrix adjust.
Identities = 216/240 (90%), Positives = 229/240 (96%), Gaps = 0/240 (0%)
Query 1 MSVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAV 60
MSVSRR VLKFAAATPG++GLG A+SLRAAP SA SLGTLLDYAAGVIPASQIRAAGAV
Sbjct 1 MSVSRRGVLKFAAATPGLVGLGAAAASLRAAPVSAASLGTLLDYAAGVIPASQIRAAGAV 60
Query 61 GAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQH 120
G+IRYVSDRRPGGAWMLGKPIQ+ EARDL GNGLK+VSCYQYGKGST+DWLGGA+AGVQH
Sbjct 61 GSIRYVSDRRPGGAWMLGKPIQIGEARDLVGNGLKVVSCYQYGKGSTSDWLGGAAAGVQH 120
Query 121 ARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSKT 180
ARRG ELH AAGGP SAPIYAS+DDNPSYEQYKNQIVPYLR+WESVIGHQRTGVYANSKT
Sbjct 121 ARRGVELHTAAGGPPSAPIYASVDDNPSYEQYKNQIVPYLRAWESVIGHQRTGVYANSKT 180
Query 181 IDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFGQWA 240
IDWAV DGLGSYFWQHNWGSPKGYTHPAA+LHQVEIDKRKVGGVGVD+N+ILKPQFGQWA
Sbjct 181 IDWAVGDGLGSYFWQHNWGSPKGYTHPAANLHQVEIDKRKVGGVGVDINEILKPQFGQWA 240
>gi|240171008|ref|ZP_04749667.1| hypothetical protein MkanA1_16980 [Mycobacterium kansasii ATCC
12478]
Length=233
Score = 414 bits (1063), Expect = 8e-114, Method: Compositional matrix adjust.
Identities = 209/233 (90%), Positives = 224/233 (97%), Gaps = 0/233 (0%)
Query 8 VLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAVGAIRYVS 67
+LK+AAA PG+LGLG+ A+SLRAAPASAGSLGTLLDY+AGVIPASQIRAAGAVGAIRYVS
Sbjct 1 MLKYAAAVPGLLGLGIAAASLRAAPASAGSLGTLLDYSAGVIPASQIRAAGAVGAIRYVS 60
Query 68 DRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQHARRGSEL 127
DRRPGG WMLGKPIQL EARDLS NGLKIVSCYQ+GKGST+DWLGGA+AGVQHA+RG EL
Sbjct 61 DRRPGGTWMLGKPIQLGEARDLSSNGLKIVSCYQFGKGSTSDWLGGAAAGVQHAKRGMEL 120
Query 128 HAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSKTIDWAVND 187
HAAAGGP SAPIYASIDD+PSYEQYKNQ+ PYLRSWESVIGHQRTGVYANSKTIDWAV D
Sbjct 121 HAAAGGPVSAPIYASIDDDPSYEQYKNQVAPYLRSWESVIGHQRTGVYANSKTIDWAVRD 180
Query 188 GLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFGQWA 240
GLGSYFWQHNWGSPKG+THPAA+LHQVEIDKRKVGGVGVDVN+ILKPQFGQWA
Sbjct 181 GLGSYFWQHNWGSPKGFTHPAANLHQVEIDKRKVGGVGVDVNEILKPQFGQWA 233
>gi|296170407|ref|ZP_06851995.1| secreted protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295894878|gb|EFG74599.1| secreted protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=232
Score = 392 bits (1008), Expect = 2e-107, Method: Compositional matrix adjust.
Identities = 200/233 (86%), Positives = 216/233 (93%), Gaps = 1/233 (0%)
Query 8 VLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAVGAIRYVS 67
+LK AAATP +LGLG +SLR APASA SLGTLLDYAAGVIPASQIRAAGAVG+IRYVS
Sbjct 1 MLKLAAATPALLGLGFAGASLRPAPASA-SLGTLLDYAAGVIPASQIRAAGAVGSIRYVS 59
Query 68 DRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQHARRGSEL 127
DRRPGG WMLGKPIQ++EARDL+ NGLKIVSCYQYGKG+TADWLGGA+AG+QHA+RG +L
Sbjct 60 DRRPGGNWMLGKPIQIAEARDLNSNGLKIVSCYQYGKGNTADWLGGANAGLQHAQRGMQL 119
Query 128 HAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSKTIDWAVND 187
HAAAGGP APIYASIDD+PSYEQYK I PYLRSWESVIGHQRTGVYANSKTIDWA++D
Sbjct 120 HAAAGGPAGAPIYASIDDDPSYEQYKQLIAPYLRSWESVIGHQRTGVYANSKTIDWALHD 179
Query 188 GLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFGQWA 240
GLGSYFWQHNWGSPKGY HPAAHLHQVEIDKR VGGVGVDVN+ILKPQFGQWA
Sbjct 180 GLGSYFWQHNWGSPKGYAHPAAHLHQVEIDKRSVGGVGVDVNEILKPQFGQWA 232
>gi|15827604|ref|NP_301867.1| hypothetical protein ML1190 [Mycobacterium leprae TN]
gi|221230081|ref|YP_002503497.1| hypothetical protein MLBr_01190 [Mycobacterium leprae Br4923]
gi|4539126|emb|CAB39570.1| hypothetical protein MLCB458.05 [Mycobacterium leprae]
gi|13093155|emb|CAC31571.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219933188|emb|CAR71285.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=239
Score = 392 bits (1007), Expect = 2e-107, Method: Compositional matrix adjust.
Identities = 198/241 (83%), Positives = 216/241 (90%), Gaps = 3/241 (1%)
Query 1 MSVSRRDVLKFAAATPGVLGLGVVASSLRAAPAS-AGSLGTLLDYAAGVIPASQIRAAGA 59
MSVSRRDVLKFA TPG+LGLGV A++L A PAS AGSLGTLLDYAAGVIPASQIRA GA
Sbjct 1 MSVSRRDVLKFATVTPGLLGLGVAAAALCAVPASTAGSLGTLLDYAAGVIPASQIRATGA 60
Query 60 VGAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQ 119
VGAIRYVSD P G W +GKPIQ++EARDL NGLKIVSCYQYGKG+TADWLGGA+AG++
Sbjct 61 VGAIRYVSD--PRGTWAVGKPIQVTEARDLINNGLKIVSCYQYGKGNTADWLGGATAGLR 118
Query 120 HARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSK 179
HA+RG +LH AAGGP SAPIYASID NP+YEQYK Q+ PYLRSWESVIGHQRTGVYANS+
Sbjct 119 HAQRGVQLHTAAGGPVSAPIYASIDSNPTYEQYKQQVAPYLRSWESVIGHQRTGVYANSR 178
Query 180 TIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFGQW 239
TI WA+ DGL SYFWQHNWGSPKGYTHPAA+LHQVEID+R VGGVGVDVN ILKPQFGQW
Sbjct 179 TIAWALQDGLASYFWQHNWGSPKGYTHPAANLHQVEIDRRTVGGVGVDVNTILKPQFGQW 238
Query 240 A 240
A
Sbjct 239 A 239
>gi|254823143|ref|ZP_05228144.1| hypothetical protein MintA_24655 [Mycobacterium intracellulare
ATCC 13950]
Length=240
Score = 382 bits (981), Expect = 3e-104, Method: Compositional matrix adjust.
Identities = 203/239 (85%), Positives = 223/239 (94%), Gaps = 1/239 (0%)
Query 2 SVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAVG 61
SVSRRD+ K+AAA P +LGLG +SL AAPASA SLGTLLDYAAGVIPAS+IRAAGAVG
Sbjct 3 SVSRRDLFKYAAAAPALLGLGAAGASLDAAPASA-SLGTLLDYAAGVIPASEIRAAGAVG 61
Query 62 AIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQHA 121
+IRYVSDRRPGG WMLGKPIQ++EARDL NGLKIVSCYQYGKG+TADWLGGA+AG+QHA
Sbjct 62 SIRYVSDRRPGGKWMLGKPIQVAEARDLHSNGLKIVSCYQYGKGNTADWLGGANAGLQHA 121
Query 122 RRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSKTI 181
+RG +LHAAAGGP +APIYASIDD+PSYEQYK+QI PYLRSWESVIGHQRTGVYANSKTI
Sbjct 122 QRGMQLHAAAGGPATAPIYASIDDDPSYEQYKSQIAPYLRSWESVIGHQRTGVYANSKTI 181
Query 182 DWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFGQWA 240
DWA++DGLGSYFWQHNWGSPKGY HPAAHLHQVEIDKR VGGVGVD+N+ILKPQFGQWA
Sbjct 182 DWALHDGLGSYFWQHNWGSPKGYAHPAAHLHQVEIDKRSVGGVGVDINEILKPQFGQWA 240
>gi|41408432|ref|NP_961268.1| hypothetical protein MAP2334c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396788|gb|AAS04651.1| hypothetical protein MAP_2334c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336461007|gb|EGO39887.1| protein exported by TAT pathway [Mycobacterium avium subsp. paratuberculosis
S397]
Length=240
Score = 380 bits (976), Expect = 9e-104, Method: Compositional matrix adjust.
Identities = 204/238 (86%), Positives = 225/238 (95%), Gaps = 1/238 (0%)
Query 2 SVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAVG 61
SVSRRD+LKFAAA P +LGLGV S++ AAPASA SLGTLLDYAAGVIP SQ+RAAGA+G
Sbjct 3 SVSRRDLLKFAAAAPALLGLGVAGSTVHAAPASA-SLGTLLDYAAGVIPGSQLRAAGALG 61
Query 62 AIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQHA 121
AIRYVSDRRPGG WMLGKPIQ++EARDL+ NGLKIVSCYQYGKG+TADWLGGASAG+QHA
Sbjct 62 AIRYVSDRRPGGNWMLGKPIQVAEARDLNANGLKIVSCYQYGKGNTADWLGGASAGLQHA 121
Query 122 RRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSKTI 181
+RG +LHAAAGGP +APIYASIDD+PSYEQYK+QI PYLRSWESVIGHQRTGVYANSKTI
Sbjct 122 QRGMQLHAAAGGPATAPIYASIDDDPSYEQYKSQIAPYLRSWESVIGHQRTGVYANSKTI 181
Query 182 DWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFGQW 239
DWA++DGLGSYFWQHNWGSPKG+THPAAHLHQVEIDKR VGGVGVD+N+ILKPQFGQW
Sbjct 182 DWALHDGLGSYFWQHNWGSPKGFTHPAAHLHQVEIDKRSVGGVGVDINEILKPQFGQW 239
>gi|342857912|ref|ZP_08714568.1| hypothetical protein MCOL_03520 [Mycobacterium colombiense CECT
3035]
gi|342135245|gb|EGT88411.1| hypothetical protein MCOL_03520 [Mycobacterium colombiense CECT
3035]
Length=240
Score = 379 bits (974), Expect = 2e-103, Method: Compositional matrix adjust.
Identities = 203/239 (85%), Positives = 221/239 (93%), Gaps = 1/239 (0%)
Query 2 SVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAVG 61
SVSRRD+LK AAATP +LGL +SL AAPASA SLGTLLDYAAGVIPASQIRAAGAVG
Sbjct 3 SVSRRDLLKLAAATPALLGLSTTGASLAAAPASA-SLGTLLDYAAGVIPASQIRAAGAVG 61
Query 62 AIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQHA 121
+IRYVSDRRPGG WMLGKPIQ++EARDL NGLKIVSCYQYGK STADWLGGA+AG+QHA
Sbjct 62 SIRYVSDRRPGGNWMLGKPIQVAEARDLDSNGLKIVSCYQYGKASTADWLGGANAGLQHA 121
Query 122 RRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSKTI 181
+RG +LHAAAGGP SAPIYASIDD+PSYEQYK+Q+ PYLRSWESVIGHQRTGVY NSKTI
Sbjct 122 QRGMQLHAAAGGPASAPIYASIDDDPSYEQYKSQVAPYLRSWESVIGHQRTGVYGNSKTI 181
Query 182 DWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFGQWA 240
DWA++DGLGSYFWQHNWGSPKGY HPAA+LHQVEIDKR VGGVGVD+N+ILKPQFGQWA
Sbjct 182 DWALHDGLGSYFWQHNWGSPKGYAHPAANLHQVEIDKRSVGGVGVDINEILKPQFGQWA 240
>gi|118464458|ref|YP_880881.1| secreted protein [Mycobacterium avium 104]
gi|254774476|ref|ZP_05215992.1| secreted protein [Mycobacterium avium subsp. avium ATCC 25291]
gi|118165745|gb|ABK66642.1| secreted protein [Mycobacterium avium 104]
Length=240
Score = 379 bits (972), Expect = 3e-103, Method: Compositional matrix adjust.
Identities = 204/238 (86%), Positives = 224/238 (95%), Gaps = 1/238 (0%)
Query 2 SVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAVG 61
SVSRRD+LKFAAA P +LGLGV S+ AAPASA SLGTLLDYAAGVIP SQ+RAAGA+G
Sbjct 3 SVSRRDLLKFAAAAPALLGLGVAGSTAYAAPASA-SLGTLLDYAAGVIPGSQLRAAGALG 61
Query 62 AIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQHA 121
AIRYVSDRRPGG WMLGKPIQ++EARDL+ NGLKIVSCYQYGKG+TADWLGGASAG+QHA
Sbjct 62 AIRYVSDRRPGGNWMLGKPIQVAEARDLNANGLKIVSCYQYGKGNTADWLGGASAGLQHA 121
Query 122 RRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSKTI 181
+RG +LHAAAGGP +APIYASIDD+PSYEQYK+QI PYLRSWESVIGHQRTGVYANSKTI
Sbjct 122 QRGMQLHAAAGGPATAPIYASIDDDPSYEQYKSQIAPYLRSWESVIGHQRTGVYANSKTI 181
Query 182 DWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFGQW 239
DWA++DGLGSYFWQHNWGSPKG+THPAAHLHQVEIDKR VGGVGVD+N+ILKPQFGQW
Sbjct 182 DWALHDGLGSYFWQHNWGSPKGFTHPAAHLHQVEIDKRSVGGVGVDINEILKPQFGQW 239
>gi|126436239|ref|YP_001071930.1| hypothetical protein Mjls_3662 [Mycobacterium sp. JLS]
gi|126236039|gb|ABN99439.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=241
Score = 342 bits (876), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 171/242 (71%), Positives = 196/242 (81%), Gaps = 5/242 (2%)
Query 1 MSVSRRDVLKFAAATPGVLGLGV---VASSLRAAPASAGSLGTLLDYAAGVIPASQIRAA 57
MS+SRR VLK AA P VLG+ +S A PA+A LG LLDYAAGV+ A+ IRA+
Sbjct 1 MSISRRQVLK--AAAPAVLGMSAGLQAVASALAPPAAAAPLGVLLDYAAGVLKATDIRAS 58
Query 58 GAVGAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAG 117
GA+GAIRYVSDRRPGGAWMLGKPI L EARDL NGLKIVSCYQ+GK TADWLGG +AG
Sbjct 59 GAIGAIRYVSDRRPGGAWMLGKPILLPEARDLYQNGLKIVSCYQFGKADTADWLGGQNAG 118
Query 118 VQHARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYAN 177
VQHA+RG ELH AAGG APIYASIDD+P++EQYK Q+ PYL+ WE+V+G QR G+YAN
Sbjct 119 VQHAKRGWELHVAAGGSYGAPIYASIDDDPTFEQYKQQVAPYLKGWEAVLGRQRVGIYAN 178
Query 178 SKTIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFG 237
SKTI+WA+ DG+G+YFWQHNWGSP HPAAHLHQVEID R V GVGVD+N IL+PQFG
Sbjct 179 SKTIEWALQDGIGTYFWQHNWGSPGRVAHPAAHLHQVEIDARTVAGVGVDINHILRPQFG 238
Query 238 QW 239
QW
Sbjct 239 QW 240
>gi|333990022|ref|YP_004522636.1| hypothetical protein JDM601_1382 [Mycobacterium sp. JDM601]
gi|333485990|gb|AEF35382.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=233
Score = 331 bits (848), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 158/207 (77%), Positives = 175/207 (85%), Gaps = 0/207 (0%)
Query 34 SAGSLGTLLDYAAGVIPASQIRAAGAVGAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNG 93
A LG LLDY+AGV+ A +IRAAGAVGAIRYV+DRRPG WMLGKPIQ +EA DL NG
Sbjct 27 QAEPLGILLDYSAGVLTAEEIRAAGAVGAIRYVADRRPGADWMLGKPIQPAEAHDLHQNG 86
Query 94 LKIVSCYQYGKGSTADWLGGASAGVQHARRGSELHAAAGGPTSAPIYASIDDNPSYEQYK 153
L+IVSCYQYGK +TADWLGG AG +HA+RGS LHAAAGGP APIYASIDD+PSYEQY+
Sbjct 87 LQIVSCYQYGKQATADWLGGQQAGAEHAQRGSHLHAAAGGPDDAPIYASIDDDPSYEQYR 146
Query 154 NQIVPYLRSWESVIGHQRTGVYANSKTIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQ 213
Q+ PYLR WESVIG RTGVYANSKTI+WAV DGLGSYFWQHNWGSP G H A+LHQ
Sbjct 147 AQVAPYLRGWESVIGQHRTGVYANSKTIEWAVQDGLGSYFWQHNWGSPGGIAHQVANLHQ 206
Query 214 VEIDKRKVGGVGVDVNQILKPQFGQWA 240
VE+DKRKVG VGVD+NQIL P+FGQWA
Sbjct 207 VEVDKRKVGDVGVDINQILTPRFGQWA 233
>gi|108800615|ref|YP_640812.1| hypothetical protein Mmcs_3649 [Mycobacterium sp. MCS]
gi|119869754|ref|YP_939706.1| hypothetical protein Mkms_3722 [Mycobacterium sp. KMS]
gi|108771034|gb|ABG09756.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119695843|gb|ABL92916.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=231
Score = 329 bits (844), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 152/201 (76%), Positives = 173/201 (87%), Gaps = 0/201 (0%)
Query 39 GTLLDYAAGVIPASQIRAAGAVGAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVS 98
G LLDYAAGV+ A+ IRA+GA+GAIRYVSDRRPGGAWMLGKPI LSEARDL NGLKIVS
Sbjct 30 GVLLDYAAGVLKATDIRASGAIGAIRYVSDRRPGGAWMLGKPILLSEARDLYQNGLKIVS 89
Query 99 CYQYGKGSTADWLGGASAGVQHARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVP 158
CYQ+GK TADWLGG +AGVQHA+RG ELH AAGG APIYASIDD+P++EQYK Q+ P
Sbjct 90 CYQFGKADTADWLGGQNAGVQHAKRGWELHVAAGGSYGAPIYASIDDDPTFEQYKQQVAP 149
Query 159 YLRSWESVIGHQRTGVYANSKTIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDK 218
YL+ WE+V+G QR G+YANSKTI+WA+ DG+G+YFWQHNWGSP HPAAHLHQVEID
Sbjct 150 YLKGWEAVLGRQRVGIYANSKTIEWALQDGIGTYFWQHNWGSPGRVAHPAAHLHQVEIDA 209
Query 219 RKVGGVGVDVNQILKPQFGQW 239
R V GVGVD+N IL+PQFGQW
Sbjct 210 RTVAGVGVDINHILRPQFGQW 230
>gi|169628602|ref|YP_001702251.1| hypothetical protein MAB_1511 [Mycobacterium abscessus ATCC 19977]
gi|169240569|emb|CAM61597.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=238
Score = 301 bits (770), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 158/240 (66%), Positives = 184/240 (77%), Gaps = 3/240 (1%)
Query 1 MSVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAV 60
+ +SRRDVLK+AAA A S A A+A SLGTL+DYA GV I+AAG +
Sbjct 2 VPISRRDVLKYAAAI--PAAALAGAVSAAAPRANAASLGTLIDYAGGVPTPESIKAAGHL 59
Query 61 GAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQH 120
GAIRYVSD R G GKPI+L+EARDL GLKIVS YQYGK TADWLGG AG++H
Sbjct 60 GAIRYVSDPRSPGL-SAGKPIKLAEARDLYRAGLKIVSNYQYGKQDTADWLGGHDAGIKH 118
Query 121 ARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSKT 180
A+RG +LH AAGG + PIY SIDDNP+ EQYKNQ+ PYL++WE+V+GHQRTG+Y NSKT
Sbjct 119 AQRGWQLHIAAGGSYNVPIYVSIDDNPTPEQYKNQVAPYLKAWETVLGHQRTGLYGNSKT 178
Query 181 IDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFGQWA 240
IDWA+ DGL SYFWQHNWGSPKG+ HP AHLHQ EIDKR+VGG+GVD+N ILKP FGQW
Sbjct 179 IDWALQDGLCSYFWQHNWGSPKGFVHPEAHLHQFEIDKRQVGGIGVDLNDILKPNFGQWV 238
>gi|226365394|ref|YP_002783177.1| hypothetical protein ROP_59850 [Rhodococcus opacus B4]
gi|226243884|dbj|BAH54232.1| hypothetical protein [Rhodococcus opacus B4]
Length=240
Score = 288 bits (736), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 142/240 (60%), Positives = 170/240 (71%), Gaps = 1/240 (0%)
Query 1 MSVSRRDVLKFAAATPGVLGLGVVASSLRA-APASAGSLGTLLDYAAGVIPASQIRAAGA 59
M +SRRD+ ++AAA V G+ + S+ + A A A SLG L+DYA GV A I AG
Sbjct 1 MQISRRDLFRYAAAGSAVAGIAALTSTTSSVAVAKADSLGILIDYAGGVPSADAIVEAGY 60
Query 60 VGAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQ 119
GAIRYVSDRRPG WM GKP+ EA+ L GL +VSCYQ+GKG TADW GG AG +
Sbjct 61 AGAIRYVSDRRPGAEWMEGKPMLADEAQALLDAGLSVVSCYQFGKGPTADWRGGLEAGKR 120
Query 120 HARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSK 179
HA RG ELH AAGGP PIYASIDDNPS + I PYL WESV+G TG+YANSK
Sbjct 121 HAERGLELHLAAGGPEDRPIYASIDDNPSPADFLTMIAPYLAGWESVVGKGNTGIYANSK 180
Query 180 TIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFGQW 239
T+D AV GLGS++WQH+WG+P+G+ HP+AHLHQ EID V GVG+D+N ILKP +GQW
Sbjct 181 TLDLAVLAGLGSWYWQHDWGTPEGFVHPSAHLHQYEIDASNVDGVGIDLNDILKPDYGQW 240
>gi|312138829|ref|YP_004006165.1| hypothetical protein REQ_13960 [Rhodococcus equi 103S]
gi|311888168|emb|CBH47480.1| putative secreted protein [Rhodococcus equi 103S]
Length=263
Score = 286 bits (731), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 143/240 (60%), Positives = 177/240 (74%), Gaps = 4/240 (1%)
Query 1 MSVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAV 60
+ VSRR++ K+AAA +A+ + A+AG TL+DY+AGV IRAAG V
Sbjct 20 VQVSRRELFKYAAAG---TAAAGLAALAGPSVANAGP-ATLIDYSAGVPSPLGIRAAGHV 75
Query 61 GAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQH 120
GAIRYVSDRRPG WMLGKP+Q EA ++ GL+IVSCYQ+GKG T+DW GG AG++H
Sbjct 76 GAIRYVSDRRPGAEWMLGKPMQFGEAAAMAAFGLQIVSCYQFGKGQTSDWRGGFDAGIRH 135
Query 121 ARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSKT 180
A+RG ELH AAGGP + PIYASIDDNPS ++ N I PYLR WE V+G + GVYAN+ T
Sbjct 136 AQRGLELHRAAGGPENCPIYASIDDNPSPWEFDNLIAPYLRGWEEVLGRRNVGVYANTPT 195
Query 181 IDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFGQWA 240
ID + G+G FWQHNWGSP GY HPAAHLHQ EIDKR++ G+G+D+N ILKPQ+GQW+
Sbjct 196 IDRCLRAGIGGLFWQHNWGSPAGYVHPAAHLHQFEIDKRQIEGIGIDLNSILKPQYGQWS 255
>gi|325676471|ref|ZP_08156149.1| secreted protein [Rhodococcus equi ATCC 33707]
gi|325552649|gb|EGD22333.1| secreted protein [Rhodococcus equi ATCC 33707]
Length=249
Score = 285 bits (730), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 143/240 (60%), Positives = 177/240 (74%), Gaps = 4/240 (1%)
Query 1 MSVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAV 60
+ VSRR++ K+AAA +A+ + A+AG TL+DY+AGV IRAAG V
Sbjct 6 VQVSRRELFKYAAAG---TAAAGLAALAGPSVANAGP-ATLIDYSAGVPSPLGIRAAGHV 61
Query 61 GAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQH 120
GAIRYVSDRRPG WMLGKP+Q EA ++ GL+IVSCYQ+GKG T+DW GG AG++H
Sbjct 62 GAIRYVSDRRPGAEWMLGKPMQFGEAAAMAAFGLQIVSCYQFGKGQTSDWRGGFDAGIRH 121
Query 121 ARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSKT 180
A+RG ELH AAGGP + PIYASIDDNPS ++ N I PYLR WE V+G + GVYAN+ T
Sbjct 122 AQRGLELHRAAGGPENCPIYASIDDNPSPWEFDNLIAPYLRGWEEVLGRRNVGVYANTPT 181
Query 181 IDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFGQWA 240
ID + G+G FWQHNWGSP GY HPAAHLHQ EIDKR++ G+G+D+N ILKPQ+GQW+
Sbjct 182 IDRCLRAGIGGLFWQHNWGSPAGYVHPAAHLHQFEIDKRQIEGIGIDLNSILKPQYGQWS 241
>gi|111022886|ref|YP_705858.1| hypothetical protein RHA1_ro05923 [Rhodococcus jostii RHA1]
gi|110822416|gb|ABG97700.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=240
Score = 285 bits (729), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 140/240 (59%), Positives = 169/240 (71%), Gaps = 1/240 (0%)
Query 1 MSVSRRDVLKFAAATPGVLGLGVVASSLRA-APASAGSLGTLLDYAAGVIPASQIRAAGA 59
M +SRRD+ ++AAA V G+ + S+ + A A A SLG L+DYA GV A I AG
Sbjct 1 MQISRRDLFRYAAAGSAVAGIAALTSTTSSVAVAKADSLGILIDYAGGVPSADAILEAGY 60
Query 60 VGAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQ 119
GAIRYVSDRRPG WM GKP+ EA+ L GL +VSCYQ+GKG TADW GG AG +
Sbjct 61 AGAIRYVSDRRPGAEWMEGKPMLADEAQALLDAGLSVVSCYQFGKGPTADWRGGLEAGKR 120
Query 120 HARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSK 179
HA RG ELH AAGG PIYASIDDNP+ + I PYL WESV+G TG+YANSK
Sbjct 121 HAERGLELHLAAGGSEDRPIYASIDDNPTPADFLTMIAPYLAGWESVVGKANTGIYANSK 180
Query 180 TIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFGQW 239
T+D AV GLGS++WQH+WG+P+GY HP+AHLHQ EID V GVG+D+N IL+P +GQW
Sbjct 181 TLDLAVLAGLGSWYWQHDWGTPEGYVHPSAHLHQYEIDASSVDGVGIDLNDILEPDYGQW 240
>gi|229493877|ref|ZP_04387649.1| secreted protein [Rhodococcus erythropolis SK121]
gi|229319154|gb|EEN85003.1| secreted protein [Rhodococcus erythropolis SK121]
Length=260
Score = 274 bits (701), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 141/240 (59%), Positives = 172/240 (72%), Gaps = 2/240 (0%)
Query 1 MSVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAV 60
M VSRR++ K+AAA GL ++ + A +AGSLGTLLDYAAGV A I+AAG
Sbjct 1 MHVSRRNLFKYAAAGSAAAGLAALSGTTSVA--NAGSLGTLLDYAAGVPSAQAIKAAGYA 58
Query 61 GAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQH 120
GAIRYVSDRRPG WM+GKP+ E L+ GL++VSCYQ+GKG TADW G AG +H
Sbjct 59 GAIRYVSDRRPGADWMVGKPVLARETDALTAAGLQVVSCYQFGKGGTADWRGAREAGKRH 118
Query 121 ARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSKT 180
A RG ELHAAAGGP+ PIYASIDDNP+ + I PYL W SV+G+ GVY N++
Sbjct 119 AARGLELHAAAGGPSGRPIYASIDDNPTTTEITTLIAPYLEGWASVVGNGALGVYGNTRV 178
Query 181 IDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFGQWA 240
ID ++ G+G++FWQHNWGSP GY HP A+LHQ EIDKRKV GVGVD+N IL +GQW+
Sbjct 179 IDAMISAGVGTWFWQHNWGSPAGYVHPRANLHQFEIDKRKVDGVGVDLNSILTRDYGQWS 238
>gi|226307688|ref|YP_002767648.1| hypothetical protein RER_42010 [Rhodococcus erythropolis PR4]
gi|226186805|dbj|BAH34909.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=260
Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 140/240 (59%), Positives = 172/240 (72%), Gaps = 2/240 (0%)
Query 1 MSVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAV 60
M VSRR++ K+AAA GL ++ + A +AGSLGTLLDYAAGV A I+AAG
Sbjct 1 MHVSRRNLFKYAAAGSAAAGLAALSGTTSVA--NAGSLGTLLDYAAGVPSAQAIKAAGYA 58
Query 61 GAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQH 120
GAIRYVSDRRPG WM+GKP+ E L+ GL++VSCYQ+GKG TADW G AG +H
Sbjct 59 GAIRYVSDRRPGADWMVGKPVLARETDALTAAGLQVVSCYQFGKGGTADWRGAREAGKRH 118
Query 121 ARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSKT 180
A RG ELHAAAGGP+ PIYASIDDNP+ + I PYL W SV+G+ G+Y N++
Sbjct 119 ASRGLELHAAAGGPSGRPIYASIDDNPTSTEITTLIAPYLEGWASVVGNGALGIYGNTRV 178
Query 181 IDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFGQWA 240
ID ++ G+G++FWQHNWGSP GY HP A+LHQ EIDKRKV GVGVD+N IL +GQW+
Sbjct 179 IDAMISAGVGTWFWQHNWGSPAGYVHPRANLHQFEIDKRKVDGVGVDLNSILTRDYGQWS 238
>gi|54026739|ref|YP_120981.1| hypothetical protein nfa47650 [Nocardia farcinica IFM 10152]
gi|54018247|dbj|BAD59617.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=238
Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 130/202 (65%), Positives = 150/202 (75%), Gaps = 0/202 (0%)
Query 39 GTLLDYAAGVIPASQIRAAGAVGAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVS 98
GTLLDYAAGV A+ IR AG G IRYVSDRRPG WM GKP+ E L GL IVS
Sbjct 37 GTLLDYAAGVPSAAAIREAGHAGVIRYVSDRRPGAEWMAGKPLLAGEVEALREQGLSIVS 96
Query 99 CYQYGKGSTADWLGGASAGVQHARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVP 158
CYQ+GKG TADW GG AG +HA RG ELH AAGGP APIYASIDDNP+ ++ I P
Sbjct 97 CYQFGKGPTADWRGGLEAGKKHAERGLELHLAAGGPDDAPIYASIDDNPTPVEFATMIAP 156
Query 159 YLRSWESVIGHQRTGVYANSKTIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDK 218
YL W++V+G Q GVYAN+ TI+ A GLG+++WQHNWG+PKG+ HP AHLHQ EIDK
Sbjct 157 YLVGWQTVLGKQNVGVYANAPTIELARVAGLGAWYWQHNWGTPKGFVHPGAHLHQFEIDK 216
Query 219 RKVGGVGVDVNQILKPQFGQWA 240
R V G+GVDVN ILKPQ+GQW+
Sbjct 217 RTVDGIGVDVNDILKPQYGQWS 238
>gi|225023112|ref|ZP_03712304.1| hypothetical protein CORMATOL_03161 [Corynebacterium matruchotii
ATCC 33806]
gi|224944335|gb|EEG25544.1| hypothetical protein CORMATOL_03161 [Corynebacterium matruchotii
ATCC 33806]
Length=338
Score = 234 bits (598), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 122/244 (50%), Positives = 156/244 (64%), Gaps = 10/244 (4%)
Query 2 SVSRRDVLKFAAAT----PGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAA 57
++SRR L+ AA T G+ A A A LGT++DYAAGV S I+ A
Sbjct 6 ALSRRRFLQTAALTIASSFAFAAAGITAPQ---AFALGPVLGTVIDYAAGVPDGSTIKEA 62
Query 58 GAVGAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAG 117
G +G++RYVS RRPG WMLGKP+ + E +D + NGLK+ S YQ+GK TADW GA+
Sbjct 63 GHLGSVRYVSQRRPGAEWMLGKPVTIEETKDQAANGLKVASIYQFGKDETADWKQGAAGA 122
Query 118 VQHARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQ--RTGVY 175
HA + +LHAAAGGP PIY +IDDNPS E+Y NQI PYL++++ ++ Q GVY
Sbjct 123 AVHAPQAIQLHAAAGGPKGRPIYVAIDDNPSREEYDNQIRPYLKAFDEILKSQGYTMGVY 182
Query 176 ANSKTIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQ 235
AN TIDWA+ DGLGSYFWQH+WGS G HP LHQV + + G+ VDVN +
Sbjct 183 ANYGTIDWAIQDGLGSYFWQHDWGS-NGQIHPRVTLHQVAGETENLDGIEVDVNDVYAED 241
Query 236 FGQW 239
+GQW
Sbjct 242 WGQW 245
>gi|145295004|ref|YP_001137825.1| hypothetical protein cgR_0949 [Corynebacterium glutamicum R]
gi|140844924|dbj|BAF53923.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344043575|gb|EGV39264.1| hypothetical protein CgS9114_13715 [Corynebacterium glutamicum
S9114]
Length=280
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/243 (50%), Positives = 156/243 (65%), Gaps = 9/243 (3%)
Query 1 MSVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAV 60
M ++RR LK AT G+ +G + + A A GT++DYAAGV A+ I+ AG +
Sbjct 1 MQINRRGFLK---ATAGLATIGAASMFMPKANALGAIKGTVIDYAAGVPSAASIKNAGHL 57
Query 61 GAIRYVSDRRPGG-AWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQ 119
GA+RYVS RRPG +WM+GKP+ L+E R NGLK S YQYGK TADW GA+
Sbjct 58 GAVRYVSQRRPGTESWMIGKPVTLAETRSFEQNGLKTASVYQYGKAETADWKNGAAGAAT 117
Query 120 HARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWE---SVIGHQRTGVYA 176
HA + LH AAGGP + PIY +IDDNPS+ +Y NQI PYL+++ S G+Q GVY
Sbjct 118 HAPQAIALHVAAGGPKNRPIYVAIDDNPSWSEYTNQIRPYLQAFNVALSAAGYQ-LGVYG 176
Query 177 NSKTIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQF 236
N IDWA+ DGLG +FW HNWGS +G HP +HQ+ IDK + GVG+D+N + +
Sbjct 177 NYNVIDWAIADGLGEFFWMHNWGS-EGKIHPRTTIHQIRIDKDNLEGVGIDMNNVYADDW 235
Query 237 GQW 239
GQW
Sbjct 236 GQW 238
>gi|305682082|ref|ZP_07404886.1| Tat pathway signal sequence domain protein [Corynebacterium matruchotii
ATCC 14266]
gi|305658555|gb|EFM48058.1| Tat pathway signal sequence domain protein [Corynebacterium matruchotii
ATCC 14266]
Length=338
Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 121/244 (50%), Positives = 155/244 (64%), Gaps = 10/244 (4%)
Query 2 SVSRRDVLKFAAAT----PGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAA 57
++SRR L+ AA T G+ A A A LGT++DYAAGV S I+ A
Sbjct 6 ALSRRRFLQTAALTIASSFAFAAAGITAPQ---AFALGPVLGTVIDYAAGVPDGSTIKEA 62
Query 58 GAVGAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAG 117
G +G++RYVS RRPG WMLGKP+ + E +D + NGLK+ S YQ+GK TADW GA+
Sbjct 63 GHLGSVRYVSQRRPGAEWMLGKPVTIEETKDQAANGLKVASIYQFGKDETADWKQGAAGA 122
Query 118 VQHARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQ--RTGVY 175
HA + +LH AAGGP PIY +IDDNPS E+Y NQI PYL++++ ++ Q GVY
Sbjct 123 AVHAPQAIQLHTAAGGPKGRPIYVAIDDNPSREEYDNQIRPYLKAFDEILKSQGYTMGVY 182
Query 176 ANSKTIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQ 235
AN TIDWA+ DGLGSYFWQH+WGS G HP LHQV + + G+ VDVN +
Sbjct 183 ANYGTIDWAIQDGLGSYFWQHDWGS-NGQIHPRVTLHQVAGETENLDGIEVDVNDVYAED 241
Query 236 FGQW 239
+GQW
Sbjct 242 WGQW 245
>gi|259507125|ref|ZP_05750025.1| secreted protein [Corynebacterium efficiens YS-314]
gi|259165280|gb|EEW49834.1| secreted protein [Corynebacterium efficiens YS-314]
Length=283
Score = 232 bits (592), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 115/205 (57%), Positives = 144/205 (71%), Gaps = 4/205 (1%)
Query 38 LGTLLDYAAGVIPASQIRAAGAVGAIRYVSDRRPGG-AWMLGKPIQLSEARDLSGNGLKI 96
LGT++DYAAGV A+ I+AAG +GA+RYVS RRPG +WMLGKP+ L E R + GLK
Sbjct 38 LGTVIDYAAGVPSAASIKAAGHLGAVRYVSQRRPGTESWMLGKPVTLEETRSFAALGLKT 97
Query 97 VSCYQYGKGSTADWLGGASAGVQHARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQI 156
S YQYGKGSTADWL GA+ HA + LH AAGGPT+ PIY +IDDNP+ QY NQI
Sbjct 98 ASVYQYGKGSTADWLNGAAGAGVHAPQAIALHLAAGGPTNRPIYVAIDDNPTRTQYLNQI 157
Query 157 VPYLRSWESVI--GHQRTGVYANSKTIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQV 214
PYL+++++ + R GVY N IDWA++DGLG +FW HNWG G HP A LHQV
Sbjct 158 RPYLQAFKTALEAAGYRLGVYGNYNVIDWAISDGLGEFFWMHNWGG-TGQVHPRAALHQV 216
Query 215 EIDKRKVGGVGVDVNQILKPQFGQW 239
IDK ++ GVG+D+N + +GQW
Sbjct 217 RIDKDRLDGVGIDINHVYAHDWGQW 241
>gi|25027468|ref|NP_737522.1| hypothetical protein CE0912 [Corynebacterium efficiens YS-314]
gi|23492750|dbj|BAC17722.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length=292
Score = 231 bits (590), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 115/205 (57%), Positives = 144/205 (71%), Gaps = 4/205 (1%)
Query 38 LGTLLDYAAGVIPASQIRAAGAVGAIRYVSDRRPGG-AWMLGKPIQLSEARDLSGNGLKI 96
LGT++DYAAGV A+ I+AAG +GA+RYVS RRPG +WMLGKP+ L E R + GLK
Sbjct 47 LGTVIDYAAGVPSAASIKAAGHLGAVRYVSQRRPGTESWMLGKPVTLEETRSFAALGLKT 106
Query 97 VSCYQYGKGSTADWLGGASAGVQHARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQI 156
S YQYGKGSTADWL GA+ HA + LH AAGGPT+ PIY +IDDNP+ QY NQI
Sbjct 107 ASVYQYGKGSTADWLNGAAGAGVHAPQAIALHLAAGGPTNRPIYVAIDDNPTRTQYLNQI 166
Query 157 VPYLRSWESVI--GHQRTGVYANSKTIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQV 214
PYL+++++ + R GVY N IDWA++DGLG +FW HNWG G HP A LHQV
Sbjct 167 RPYLQAFKTALEAAGYRLGVYGNYNVIDWAISDGLGEFFWMHNWGG-TGQVHPRAALHQV 225
Query 215 EIDKRKVGGVGVDVNQILKPQFGQW 239
IDK ++ GVG+D+N + +GQW
Sbjct 226 RIDKDRLDGVGIDINHVYAHDWGQW 250
>gi|19552062|ref|NP_600064.1| hypothetical protein NCgl0801 [Corynebacterium glutamicum ATCC
13032]
gi|62389725|ref|YP_225127.1| hypothetical protein cg0955 [Corynebacterium glutamicum ATCC
13032]
gi|21323601|dbj|BAB98228.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032]
gi|41325060|emb|CAF19541.1| secreted protein [Corynebacterium glutamicum ATCC 13032]
Length=280
Score = 231 bits (588), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 119/243 (49%), Positives = 156/243 (65%), Gaps = 9/243 (3%)
Query 1 MSVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAV 60
M ++RR LK AT G+ +G + + A A GT++DYAAGV A+ I+ AG +
Sbjct 1 MQINRRGFLK---ATTGLATIGAASMFMPKANALGAIKGTVIDYAAGVPSAASIKNAGHL 57
Query 61 GAIRYVSDRRPGG-AWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQ 119
GA+RYVS RRPG +WM+GKP+ L+E R NGLK S YQYGK TADW GA+
Sbjct 58 GAVRYVSQRRPGTESWMIGKPVTLAETRAFEQNGLKTASVYQYGKAETADWKNGAAGAAT 117
Query 120 HARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWE---SVIGHQRTGVYA 176
HA + LH AAGGP + PIY +IDDNPS+ +Y NQI PYL+++ S G+Q GVY
Sbjct 118 HAPQAIALHVAAGGPKNRPIYVAIDDNPSWSEYTNQIRPYLQAFNVALSAAGYQ-LGVYG 176
Query 177 NSKTIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQF 236
N I+WA+ DGLG +FW HNWGS +G HP +HQ+ IDK + GVG+D+N + +
Sbjct 177 NYNVINWAIADGLGEFFWMHNWGS-EGKIHPRTTIHQIRIDKDTLDGVGIDMNNVYADDW 235
Query 237 GQW 239
GQW
Sbjct 236 GQW 238
>gi|333919698|ref|YP_004493279.1| Secreted protein [Amycolicicoccus subflavus DQS3-9A1]
gi|333481919|gb|AEF40479.1| Secreted protein [Amycolicicoccus subflavus DQS3-9A1]
Length=253
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 112/200 (56%), Positives = 144/200 (72%), Gaps = 4/200 (2%)
Query 40 TLLDYAAGVIPASQIRAAGAVGAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSC 99
TL+DY+AGV I+ AG G IRY+S+RR +WM GKP++ +E D+ NGL IVSC
Sbjct 58 TLIDYSAGVPSGRSIKNAGYRGVIRYMSERRE--SWMHGKPMRAAEVADMKANGLVIVSC 115
Query 100 YQYGKGSTADWLGGASAGVQHARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPY 159
YQ+GKG+T+DW G + GV HA +G LH AAGGP++ PIYA+IDDNP+ + + + Y
Sbjct 116 YQFGKGATSDWRAGFNGGVTHAAKGIALHQAAGGPSNVPIYAAIDDNPTSSELE-LVAGY 174
Query 160 LRSWESVIGHQRTGVYANSKTIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKR 219
+R WESVIG RTGVYAN TID+ GLG++FW HNWGS G HPAAH+HQ EID+
Sbjct 175 IRGWESVIGKGRTGVYANYPTIDFLRGRGLGTFFWMHNWGS-GGRVHPAAHIHQFEIDRM 233
Query 220 KVGGVGVDVNQILKPQFGQW 239
KV G+G+D N+ILK +GQW
Sbjct 234 KVDGIGIDRNRILKSHYGQW 253
>gi|296393021|ref|YP_003657905.1| hypothetical protein Srot_0592 [Segniliparus rotundus DSM 44985]
gi|296180168|gb|ADG97074.1| Domain of unknown function DUF1906 [Segniliparus rotundus DSM
44985]
Length=273
Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 124/248 (50%), Positives = 161/248 (65%), Gaps = 10/248 (4%)
Query 1 MSVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGS------LGTLLDYAAGVIPASQI 54
M++SRRDVL+ +A P VLGLG +A+ RA S + LGTL+D++A V + I
Sbjct 5 MALSRRDVLRGLSAAP-VLGLGAIAAPARADQESDNADGGLWGLGTLVDFSARVPDPAAI 63
Query 55 RAAGAVGAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGA 114
+ AG +GA+RYVS+RRP WML KP+ E + +GL + S YQ+GK TADW GG
Sbjct 64 KEAGHLGAVRYVSERRPTEPWMLAKPVTSDEVAGMREHGLAVASVYQWGKNLTADWRGGY 123
Query 115 SAGVQHARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGV 174
GV ARRG ELH AA GP IYA++DD+P + + I PYL +W VIG++R GV
Sbjct 124 DGGVDAARRGVELHLAASGPADGVIYAALDDDPDRDAFDTLIAPYLTAWRDVIGNERLGV 183
Query 175 YANSKTIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDK---RKVGGVGVDVNQI 231
Y N KTIDW + GLG+YFWQH+WG+P G H AA+LHQ+ K R + GV DV+ I
Sbjct 184 YCNPKTIDWCLGAGLGTYFWQHDWGNPSGAEHAAANLHQLPNSKGNLRVIDGVPCDVSVI 243
Query 232 LKPQFGQW 239
LKP +GQW
Sbjct 244 LKPDYGQW 251
>gi|317507985|ref|ZP_07965677.1| HpcH/HpaI aldolase/citrate lyase family protein [Segniliparus
rugosus ATCC BAA-974]
gi|316253719|gb|EFV13097.1| HpcH/HpaI aldolase/citrate lyase family protein [Segniliparus
rugosus ATCC BAA-974]
Length=568
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/242 (50%), Positives = 151/242 (63%), Gaps = 10/242 (4%)
Query 1 MSVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAV 60
M++ RR VL+ AA +G+ A RAA LGTLLD+A GV IR AGA+
Sbjct 334 MTLDRRAVLRGAATLGFASAVGLAAPRARAA-----GLGTLLDFAGGVPSPEAIRGAGAI 388
Query 61 GAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQH 120
G IRYVSD R G + KP+ + + GL +VSCYQ+GK TADW GG AG++H
Sbjct 389 GTIRYVSDPRTPG--LRAKPLTRDQVQASKAAGLVVVSCYQWGKNETADWKGGQQAGLKH 446
Query 121 ARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSKT 180
A+RG LH AAGGP APIYA+IDDNPS + + I+ YLR W+ V+G GVY N +T
Sbjct 447 AQRGVTLHLAAGGPAGAPIYAAIDDNPSDAELQGPILGYLRGWQQVVGPNALGVYCNPRT 506
Query 181 IDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRK---VGGVGVDVNQILKPQFG 237
ID+ + G+G +FWQH++G+P THPAAHLHQ + V G+ DVN ILKP FG
Sbjct 507 IDFCLRSGVGKWFWQHDYGNPGYATHPAAHLHQRAASMQPQPVVDGIQCDVNDILKPSFG 566
Query 238 QW 239
W
Sbjct 567 SW 568
>gi|317507988|ref|ZP_07965680.1| TAT pathway signal sequence [Segniliparus rugosus ATCC BAA-974]
gi|316253722|gb|EFV13100.1| TAT pathway signal sequence [Segniliparus rugosus ATCC BAA-974]
Length=252
Score = 214 bits (546), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 118/248 (48%), Positives = 156/248 (63%), Gaps = 10/248 (4%)
Query 1 MSVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGS------LGTLLDYAAGVIPASQI 54
M+++RRDVL+ A P +LG+G +A+ RA S LGTL+D++A V + I
Sbjct 1 MTLTRRDVLRGLGAAP-LLGVGALAAPARADQESDNGDGGYWGLGTLVDFSARVPDPAAI 59
Query 55 RAAGAVGAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGA 114
+ AG +GA+RYVS+RRP WML KP+ E + G+GL + S YQ+GK +ADW G
Sbjct 60 KEAGHLGAVRYVSERRPTEQWMLAKPVTADEVAGMRGHGLTVTSVYQWGKNQSADWREGY 119
Query 115 SAGVQHARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGV 174
GV A RG ELH AA GP IYA+IDD+P + + I PYL +W V+G+ GV
Sbjct 120 DGGVDAAHRGVELHLAASGPADGVIYAAIDDDPDKDLFDQLINPYLTAWRDVVGNDHLGV 179
Query 175 YANSKTIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDK---RKVGGVGVDVNQI 231
Y N KTIDW ++ GLGSYFWQH+WG+P G H AA+LHQ+ K R + V DV+ I
Sbjct 180 YCNPKTIDWCLDAGLGSYFWQHDWGNPSGAEHAAANLHQLPNSKGNLRVIDDVQCDVSVI 239
Query 232 LKPQFGQW 239
LKP +GQW
Sbjct 240 LKPDYGQW 247
>gi|296393017|ref|YP_003657901.1| hypothetical protein Srot_0588 [Segniliparus rotundus DSM 44985]
gi|296180164|gb|ADG97070.1| Domain of unknown function DUF1906 [Segniliparus rotundus DSM
44985]
Length=236
Score = 214 bits (545), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 114/242 (48%), Positives = 147/242 (61%), Gaps = 9/242 (3%)
Query 1 MSVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAV 60
M++ RR VL+ AA LGV ++ +AP + + G LLD+A + IR AGA+
Sbjct 1 MTLDRRAVLRGAAT------LGVASALGLSAPRAHAAGGVLLDFAGAAPSPAAIRGAGAI 54
Query 61 GAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQH 120
G IRYVSD R G KP+ + + GL IVSCYQYGK TADW GG AG+ H
Sbjct 55 GTIRYVSDERNGPGKRSSKPVTRDQVQVSKAAGLVIVSCYQYGKNETADWKGGQQAGLTH 114
Query 121 ARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSKT 180
ARRG +LH AAGGP APIYA IDD+PS + + I YL W+ ++G GVY N +T
Sbjct 115 ARRGVQLHLAAGGPAGAPIYACIDDDPSDAELQGPIRGYLLGWQQIVGPNAVGVYGNPRT 174
Query 181 IDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRK---VGGVGVDVNQILKPQFG 237
ID+ + G+G +FWQH++G+P THPAAHLHQ + VGG D+N I+KP FG
Sbjct 175 IDFCLRSGVGKWFWQHDYGNPGYRTHPAAHLHQRAASMQPQPVVGGTLCDINDIIKPSFG 234
Query 238 QW 239
W
Sbjct 235 AW 236
>gi|227832601|ref|YP_002834308.1| putative secreted protein [Corynebacterium aurimucosum ATCC 700975]
gi|262182914|ref|ZP_06042335.1| putative secreted protein [Corynebacterium aurimucosum ATCC 700975]
gi|227453617|gb|ACP32370.1| putative secreted protein [Corynebacterium aurimucosum ATCC 700975]
Length=308
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/242 (47%), Positives = 152/242 (63%), Gaps = 8/242 (3%)
Query 1 MSVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAV 60
MS+SRR ++K A +G S AA A +LGT++D++AGV A I+AAG +
Sbjct 1 MSLSRRSLIKAGALALTAGAIG---SHAPAALAVGPALGTIIDFSAGVPSARAIKAAGHL 57
Query 61 GAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQH 120
GAIRYVS RRPG WM GKP+ L+E + + GLK S YQ+G+ TADWL GA+ H
Sbjct 58 GAIRYVSQRRPGADWMKGKPVTLAETKANAAVGLKTASIYQFGRADTADWLNGAAGAAVH 117
Query 121 ARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVI---GHQRTGVYAN 177
A + +H AAGGPT PIY +IDDNP+ QY+NQI PYL+++ + + G+Q TGVY N
Sbjct 118 APQAIAIHKAAGGPTGRPIYIAIDDNPTRAQYENQIRPYLKAFSTALSAAGYQ-TGVYGN 176
Query 178 SKTIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFG 237
IDW VND +G ++W H+WGS G HP +HQ ++ + GV D+N + +G
Sbjct 177 YNVIDWCVNDRIGQFYWMHDWGS-GGKIHPRTTIHQKAKNQATIDGVTCDINTVYANDWG 235
Query 238 QW 239
QW
Sbjct 236 QW 237
>gi|300781730|ref|ZP_07091584.1| secreted protein [Corynebacterium genitalium ATCC 33030]
gi|300533437|gb|EFK54498.1| secreted protein [Corynebacterium genitalium ATCC 33030]
Length=321
Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/204 (52%), Positives = 137/204 (68%), Gaps = 3/204 (1%)
Query 38 LGTLLDYAAGVIPASQIRAAGAVGAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIV 97
+GT++DYAAGV +RAAG +GA+RYVS RRPG WMLGKP+ L E RD + NGL
Sbjct 42 VGTVVDYAAGVPSGRSVRAAGHLGAVRYVSQRRPGADWMLGKPVSLKETRDFAANGLWTA 101
Query 98 SCYQYGKGSTADWLGGASAGVQHARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIV 157
S YQ+G+ TADWLGGA A HA + LH AAGGP + PIY +IDDNPS QY+NQI
Sbjct 102 SVYQFGRAETADWLGGAGAAATHAPQAINLHRAAGGPNNKPIYVAIDDNPSRAQYENQIR 161
Query 158 PYLRSWESVIGHQ--RTGVYANSKTIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVE 215
PYLR++++ + RTGVY N TI+W + DG+G+Y+WQH+WGS G HP A +HQ
Sbjct 162 PYLRAFQAALATAGLRTGVYGNYNTIEWCIKDGIGTYYWQHDWGS-GGKLHPRATIHQKA 220
Query 216 IDKRKVGGVGVDVNQILKPQFGQW 239
+ + G D+N + +GQW
Sbjct 221 KWQTHIDGHLCDINNVYAADWGQW 244
>gi|255324971|ref|ZP_05366078.1| secreted protein [Corynebacterium tuberculostearicum SK141]
gi|255297960|gb|EET77270.1| secreted protein [Corynebacterium tuberculostearicum SK141]
Length=330
Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 114/246 (47%), Positives = 153/246 (63%), Gaps = 17/246 (6%)
Query 2 SVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLG----TLLDYAAGVIPASQIRAA 57
S SRR + K A L + A ++ AA +A +LG T++D++AGV I+ A
Sbjct 4 SFSRRGLFKVGA-------LALTAGAIGAAGPNAAALGPVRGTIIDFSAGVPSPQAIKNA 56
Query 58 GAVGAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAG 117
G +GAIRYVSD+RPG AWM GKP+ L E + + GL S YQ+G+ TADW GA+
Sbjct 57 GHMGAIRYVSDKRPGAAWMTGKPVTLKETKANAAAGLPTASVYQFGRAETADWKQGAAGA 116
Query 118 VQHARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVI---GHQRTGV 174
HA + LH AGGPT PIY +IDDNP+ EQY QI PYL+++ + G+Q TGV
Sbjct 117 AIHAPKAIALHKKAGGPTKRPIYIAIDDNPTREQYTRQIRPYLQAFSKTLELAGYQ-TGV 175
Query 175 YANSKTIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRK-VGGVGVDVNQILK 233
Y N TI+WA+ DG+G YFW H+WGS G HP +HQ+ K++ +GGV VDVN++
Sbjct 176 YGNYNTIEWAIQDGIGKYFWMHDWGS-NGKIHPRTTIHQLPHGKQQTIGGVIVDVNEVYA 234
Query 234 PQFGQW 239
+GQW
Sbjct 235 EDWGQW 240
>gi|319950316|ref|ZP_08024235.1| putative secreted protein [Dietzia cinnamea P4]
gi|319436008|gb|EFV91209.1| putative secreted protein [Dietzia cinnamea P4]
Length=272
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 112/230 (49%), Positives = 147/230 (64%), Gaps = 6/230 (2%)
Query 15 TPGVLGLGVVASSLRAAP-ASAG-SLGTLLDYAAGVIPASQIRAAGAVGAIRYVSDRRPG 72
TP V + + + A P A AG +GTLLDYA+G + +RAAG +GA+RY S+RRPG
Sbjct 27 TPAVGAQSSIPAEIGALPGAGAGVPVGTLLDYASGPPSGASVRAAGHMGAVRYCSNRRPG 86
Query 73 GAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQHARRGSELHAAAG 132
WM GKP+ E D +GL +VSCYQYG+ TADW GGA AG HA G +H AG
Sbjct 87 AEWMSGKPLLRREVDDFRAHGLNMVSCYQYGRAETADWKGGAGAGDHHAPIGIRIHREAG 146
Query 133 GPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVI--GHQRTGVYANSKTIDWAVNDGLG 190
GP+ P+Y +IDDNP+ Q+ NQI PYL W + + + GVYAN+ TIDW GLG
Sbjct 147 GPSGVPMYVAIDDNPTRWQFDNQIRPYLERWRAHLHGSGMKLGVYANAPTIDWCRQIGLG 206
Query 191 SYFWQHNWGSPKGYTHPAAHLHQVEIDKR-KVGGVGVDVNQILKPQFGQW 239
YFWQH+WGS G +PAA +HQ+ + ++ VGGV D+N++ +GQW
Sbjct 207 QYFWQHDWGS-GGRLNPAATIHQLPVAQQVTVGGVVSDLNRVYALDYGQW 255
>gi|227548316|ref|ZP_03978365.1| twin-arginine translocation pathway signal [Corynebacterium lipophiloflavum
DSM 44291]
gi|227079634|gb|EEI17597.1| twin-arginine translocation pathway signal [Corynebacterium lipophiloflavum
DSM 44291]
Length=285
Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/205 (51%), Positives = 137/205 (67%), Gaps = 5/205 (2%)
Query 38 LGTLLDYAAGVIPASQIRAAGAVGAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIV 97
+GT+LDY+AGV + I+ AG +GA+RYVS RP AWM GKP+ L+E D NGL
Sbjct 40 VGTVLDYSAGVPSGNSIKIAGHLGAVRYVSQPRPEAAWMRGKPVSLAETLDFKANGLATA 99
Query 98 SCYQYGKGSTADWLGGASAGVQHARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIV 157
S YQ+G+ TADWLGGA++ HA + +LH AAGGP PIY +IDDNP+ QY NQI
Sbjct 100 SVYQFGRAQTADWLGGAASAAVHAPQAIDLHRAAGGPAGRPIYIAIDDNPTRAQYDNQIR 159
Query 158 PYLRSWE---SVIGHQRTGVYANSKTIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQV 214
PYLR++ SV G+ TG+Y N TI+WA++DG+G++FW H+WGS G HP A +HQV
Sbjct 160 PYLRAFSAALSVAGYA-TGIYGNYNTIEWALSDGIGTHFWMHDWGS-GGRIHPRAAIHQV 217
Query 215 EIDKRKVGGVGVDVNQILKPQFGQW 239
K + GV D+N + +GQW
Sbjct 218 ARWKTTIDGVECDINNVYAADWGQW 242
>gi|311740909|ref|ZP_07714736.1| secreted protein [Corynebacterium pseudogenitalium ATCC 33035]
gi|311304429|gb|EFQ80505.1| secreted protein [Corynebacterium pseudogenitalium ATCC 33035]
Length=332
Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/242 (47%), Positives = 152/242 (63%), Gaps = 9/242 (3%)
Query 2 SVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAVG 61
S SRR + K A VL G + ++ +A A GT++D++AGV I+ AG +G
Sbjct 4 SFSRRGLFKVGAL---VLTAGAIGAAAPSAAALGPVRGTIIDFSAGVPSPQAIKNAGHMG 60
Query 62 AIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQHA 121
AIRYVSD+RPG AWM GKP+ L E + + GL S YQ+G+ TADW GA+ HA
Sbjct 61 AIRYVSDKRPGAAWMTGKPVTLKETKANAAAGLPTASVYQFGRAETADWKQGAAGAAVHA 120
Query 122 RRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVI---GHQRTGVYANS 178
+ LH AGGPT+ PIY +IDDNP+ EQY QI PYL+++ + G+Q TG+Y N
Sbjct 121 PKAIALHKKAGGPTNRPIYIAIDDNPTREQYTRQIRPYLQAFSKTLELAGYQ-TGIYGNY 179
Query 179 KTIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRK-VGGVGVDVNQILKPQFG 237
TI+WA+ DG+G YFW H+WGS G HP +HQ+ K++ +GGV VDVN++ +G
Sbjct 180 STIEWAIQDGIGKYFWMHDWGS-NGKIHPRTTIHQLPHGKQQTIGGVIVDVNEVYAEDWG 238
Query 238 QW 239
QW
Sbjct 239 QW 240
>gi|227487749|ref|ZP_03918065.1| twin-arginine translocation pathway signal protein [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227092251|gb|EEI27563.1| twin-arginine translocation pathway signal protein [Corynebacterium
glucuronolyticum ATCC 51867]
Length=295
Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 109/242 (46%), Positives = 148/242 (62%), Gaps = 12/242 (4%)
Query 2 SVSRRDVLKFAAATPGVLGLGVVASSLRAAPASA--GSLGTLLDYAAGVIPASQIRAAGA 59
++ RR +K + L + + A PA+A LGT++DY+ GV A+ +RAAG
Sbjct 9 TMDRRTFMKASL-------LAAAGTVVAAQPAAALGPVLGTVIDYSGGVPSAASVRAAGH 61
Query 60 VGAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQ 119
+GA+RYVS+RRPG WM+GKP+ E D + +GL + S YQ+G+ TADWL GA+ Q
Sbjct 62 LGAVRYVSERRPGADWMVGKPVSRGETADFAAHGLGVASVYQFGRAQTADWLAGAAGAAQ 121
Query 120 HARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESV--IGHQRTGVYAN 177
HA + LHAAAGGP P+Y +IDDNP+++QY QI PYL+ ++ + R GVY N
Sbjct 122 HAPKAIALHAAAGGPAGRPVYVAIDDNPTWDQYAGQIRPYLQGFKRALELAGLRLGVYGN 181
Query 178 SKTIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFG 237
I+WA NDGLG YFW H+WGS G HP +HQ + GV VDVN + +G
Sbjct 182 YNVIEWAGNDGLGEYFWMHDWGS-GGRIHPRTTIHQPAKRTALIDGVTVDVNNVYSRDWG 240
Query 238 QW 239
QW
Sbjct 241 QW 242
>gi|337290276|ref|YP_004629297.1| hypothetical protein CULC22_00665 [Corynebacterium ulcerans BR-AD22]
gi|334698582|gb|AEG83378.1| putative secreted protein [Corynebacterium ulcerans BR-AD22]
Length=302
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/240 (48%), Positives = 147/240 (62%), Gaps = 6/240 (2%)
Query 3 VSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAVGA 62
+SRR LK +AA G V + AAP LGT++D+AAGV A ++AAG +GA
Sbjct 8 MSRRGFLKASAAFVGGAAALAVTPAASAAPGPI--LGTVIDFAAGVPRAHDVKAAGHIGA 65
Query 63 IRYVSDRRPGGA-WMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQHA 121
+RYVS RRPG WMLGKP+ L+E + GL S YQ+GK +TADW GA+ V HA
Sbjct 66 VRYVSQRRPGTEGWMLGKPVTLAETTTNAALGLATASVYQFGKDATADWKQGAAGAVVHA 125
Query 122 RRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQ--RTGVYANSK 179
+ LH AAGGP PIY +IDDNP+ QY +QI PYL+++ S + G+Y N
Sbjct 126 PQAIALHIAAGGPKGRPIYVAIDDNPTRAQYDHQIRPYLQAFGSALNAAGYSLGIYGNYN 185
Query 180 TIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFGQW 239
IDWA+ D LGS+FWQH+WGS G HP +HQ K+ G+GVD+N + +GQW
Sbjct 186 VIDWAIADRLGSFFWQHDWGS-NGRIHPRTTIHQKAGYASKISGIGVDINNVYASDWGQW 244
>gi|227542388|ref|ZP_03972437.1| twin-arginine translocation pathway protein [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227181586|gb|EEI62558.1| twin-arginine translocation pathway protein [Corynebacterium
glucuronolyticum ATCC 51866]
Length=295
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 108/242 (45%), Positives = 147/242 (61%), Gaps = 12/242 (4%)
Query 2 SVSRRDVLKFAAATPGVLGLGVVASSLRAAPASA--GSLGTLLDYAAGVIPASQIRAAGA 59
++ RR +K + L + + A PA+A LGT++DY+ GV A+ +RAAG
Sbjct 9 TMDRRTFMKASL-------LAAAGTVVAAQPAAALGPVLGTVIDYSGGVPSAASVRAAGH 61
Query 60 VGAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQ 119
+GA+RYVS+RRPG WM+GKP+ E D + +GL + S YQ+G+ TADWL GA+ Q
Sbjct 62 LGAVRYVSERRPGADWMVGKPVSRGETADFAAHGLGVASVYQFGRAQTADWLAGAAGAAQ 121
Query 120 HARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESV--IGHQRTGVYAN 177
HA + LHAAAGGP P+Y +IDDNP+++QY QI PYL+ ++ + R GVY N
Sbjct 122 HAPKAIALHAAAGGPAGRPVYVAIDDNPTWDQYAGQIRPYLQGFKRALELAGLRLGVYGN 181
Query 178 SKTIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFG 237
I+WA NDGLG YFW H+WGS G HP +HQ + V VDVN + +G
Sbjct 182 YNVIEWAGNDGLGEYFWMHDWGS-GGRIHPRTTIHQPAKRTALIDCVTVDVNNVYSRDWG 240
Query 238 QW 239
QW
Sbjct 241 QW 242
>gi|334696397|gb|AEG81194.1| putative secreted protein [Corynebacterium ulcerans 809]
Length=302
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 112/240 (47%), Positives = 146/240 (61%), Gaps = 6/240 (2%)
Query 3 VSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAVGA 62
+SRR K +AA G V + AAP LGT++D+AAGV A ++AAG +GA
Sbjct 8 MSRRGFFKASAAFVGGAAALAVTPAASAAPGPI--LGTVIDFAAGVPRAHDVKAAGHIGA 65
Query 63 IRYVSDRRPGGA-WMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQHA 121
+RYVS RRPG WMLGKP+ L+E + GL S YQ+GK +TADW GA+ V HA
Sbjct 66 VRYVSQRRPGTEGWMLGKPVTLAETTTNAALGLATASVYQFGKDATADWKQGAAGAVVHA 125
Query 122 RRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQ--RTGVYANSK 179
+ LH AAGGP PIY +IDDNP+ QY +QI PYL+++ S + G+Y N
Sbjct 126 PQAIALHIAAGGPKGRPIYVAIDDNPTRAQYDHQIRPYLQAFGSALNAAGYSLGIYGNYN 185
Query 180 TIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFGQW 239
IDWA+ D LGS+FWQH+WGS G HP +HQ K+ G+GVD+N + +GQW
Sbjct 186 VIDWAIADRLGSFFWQHDWGS-NGRIHPRTTIHQKAGYASKISGIGVDINNVYASDWGQW 244
>gi|227501421|ref|ZP_03931470.1| twin-arginine translocation pathway signal [Corynebacterium accolens
ATCC 49725]
gi|227077446|gb|EEI15409.1| twin-arginine translocation pathway signal [Corynebacterium accolens
ATCC 49725]
Length=301
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/246 (45%), Positives = 154/246 (63%), Gaps = 17/246 (6%)
Query 2 SVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLG----TLLDYAAGVIPASQIRAA 57
S+SRR +LK +A L + A ++ A SA +LG T++D+++G+ + I+ A
Sbjct 4 SLSRRGLLKASA-------LAITAGAIGTAAPSAAALGPVRGTIIDFSSGIPSPAAIKRA 56
Query 58 GAVGAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAG 117
G +GAIRYVS++RPG AWM GKP+ L EA + GL S YQ+G+ TADW GA+
Sbjct 57 GHIGAIRYVSNKRPGAAWMTGKPVTLQEAAANAAAGLPTASVYQFGRAETADWKQGAAGA 116
Query 118 VQHARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWE---SVIGHQRTGV 174
HA + LH AAGGPT PIY +IDDNP+ E Y I PYL+++ SV G+Q TGV
Sbjct 117 AIHAPQAISLHKAAGGPTHRPIYIAIDDNPTREHYTQFIRPYLQAFSKALSVAGYQ-TGV 175
Query 175 YANSKTIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRK-VGGVGVDVNQILK 233
Y N TI+WA DG+G+++W H+WGS G HP +HQ+ +++ + V VDVN++
Sbjct 176 YGNYNTIEWASRDGIGTFYWMHDWGS-NGKIHPKTTIHQLPQSRQQTIENVIVDVNEVYA 234
Query 234 PQFGQW 239
+GQW
Sbjct 235 SDWGQW 240
>gi|300858035|ref|YP_003783018.1| hypothetical protein cpfrc_00617 [Corynebacterium pseudotuberculosis
FRC41]
gi|300685489|gb|ADK28411.1| putative secreted protein [Corynebacterium pseudotuberculosis
FRC41]
gi|302205757|gb|ADL10099.1| Hypothetical protein CpC231_0615 [Corynebacterium pseudotuberculosis
C231]
gi|302330314|gb|ADL20508.1| Hypothetical protein Cp1002_0615 [Corynebacterium pseudotuberculosis
1002]
gi|308275992|gb|ADO25891.1| Putative twin-arginine translocation pathway signal protein [Corynebacterium
pseudotuberculosis I19]
gi|341824428|gb|AEK91949.1| Hypothetical protein CpPAT10_0616 [Corynebacterium pseudotuberculosis
PAT10]
Length=302
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 112/240 (47%), Positives = 147/240 (62%), Gaps = 6/240 (2%)
Query 3 VSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAVGA 62
+SRR LK +AA VA + A P +GT++D+AAGV A I+AAG +GA
Sbjct 8 ISRRRFLKASAALMSGAAALAVAPTASATPGPI--VGTVIDFAAGVPRAHDIKAAGHIGA 65
Query 63 IRYVSDRRPGGA-WMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQHA 121
+RYVS RRPG WMLGKP+ L+E + + GL S YQ+GK +TADW GA+ V HA
Sbjct 66 VRYVSQRRPGTEGWMLGKPVTLAETKANADLGLATASVYQFGKDATADWKQGAAGAVVHA 125
Query 122 RRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQ--RTGVYANSK 179
+ LH AAGGP PIY +IDDNP+ QY +QI PYL+++ + + G+Y N
Sbjct 126 PQAIALHIAAGGPKGRPIYVAIDDNPTRAQYDHQIRPYLQAFGTALNAAGYSLGIYGNYN 185
Query 180 TIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFGQW 239
IDWA+ D LGS+FWQH+WGS G HP +HQ K+ GVGVD+N + +GQW
Sbjct 186 VIDWALADRLGSFFWQHDWGS-NGRIHPRTTIHQKAGYAGKISGVGVDINNVYASDWGQW 244
>gi|296118301|ref|ZP_06836882.1| secreted protein [Corynebacterium ammoniagenes DSM 20306]
gi|295968859|gb|EFG82103.1| secreted protein [Corynebacterium ammoniagenes DSM 20306]
Length=331
Score = 197 bits (502), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 98/205 (48%), Positives = 132/205 (65%), Gaps = 4/205 (1%)
Query 38 LGTLLDYAAGVIPASQIRAAGAVGAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIV 97
LGT++DY+AGV AS ++AAG +GA+RYVS +RPG WM GKP+ E +S GL
Sbjct 63 LGTVVDYSAGVPGASALKAAGHIGAVRYVSQKRPGAEWMAGKPVTRQETEAMSAQGLATA 122
Query 98 SCYQYGKGSTADWLGGASAGVQHARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIV 157
S YQ+G+ TADW GA+ HA + +H AAGGPT PIY +IDDNP+ +QY QI
Sbjct 123 SVYQFGRADTADWKKGAAGAAIHAPQAIAIHHAAGGPTGRPIYVAIDDNPTRQQYDAQIK 182
Query 158 PYLRSWESVI--GHQRTGVYANSKTIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVE 215
PYL ++++ + TGVY N I+WA NDG+GS++W H+WGS G HP +HQ+
Sbjct 183 PYLLAFQTALRAAGYSTGVYGNYNVIEWASNDGIGSFYWMHDWGS-GGKIHPRTTIHQLP 241
Query 216 IDK-RKVGGVGVDVNQILKPQFGQW 239
K R + GV VD+N + +GQW
Sbjct 242 QSKQRTIDGVVVDINNVYAQDWGQW 266
>gi|227504250|ref|ZP_03934299.1| twin-arginine translocation pathway signal protein [Corynebacterium
striatum ATCC 6940]
gi|227199137|gb|EEI79185.1| twin-arginine translocation pathway signal protein [Corynebacterium
striatum ATCC 6940]
Length=311
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/227 (47%), Positives = 141/227 (63%), Gaps = 7/227 (3%)
Query 18 VLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAVGAIRYVSDRRPGG-AWM 76
VL GVV++ +A A LGT++D+A GV I+ AG +GAIRYVS RRPG WM
Sbjct 2 VLTAGVVSAQAPSALALGPVLGTIIDFAVGVPSPQAIKNAGHLGAIRYVSQRRPGTETWM 61
Query 77 LGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQHARRGSELHAAAGGPTS 136
GKP+ L E + + GL S YQ+G+ TADW GA+ HA + +H AAGGPT+
Sbjct 62 TGKPVTLKETKANAALGLATASIYQFGRAETADWKQGAAGAAVHAPQAIAIHKAAGGPTN 121
Query 137 APIYASIDDNPSYEQYKNQIVPYLRSWESVI---GHQRTGVYANSKTIDWAVNDGLGSYF 193
PIY +IDDNP+ QY QI PYL+++ ++ G+Q TGVY N TI+W V D +GS++
Sbjct 122 RPIYIAIDDNPTRAQYDQQIKPYLQAFSKLLSAAGYQ-TGVYGNYNTIEWCVQDRIGSFY 180
Query 194 WQHNWGSPKGYTHPAAHLHQVE-IDKRKVGGVGVDVNQILKPQFGQW 239
W H+WGS G HP +HQ+ +R V GV VD+N + +GQW
Sbjct 181 WMHDWGS-GGKIHPRTTIHQLPGSAQRVVDGVTVDINHVYARDWGQW 226
>gi|296393020|ref|YP_003657904.1| hypothetical protein Srot_0591 [Segniliparus rotundus DSM 44985]
gi|296180167|gb|ADG97073.1| Domain of unknown function DUF1906 [Segniliparus rotundus DSM
44985]
Length=259
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 101/214 (48%), Positives = 133/214 (63%), Gaps = 4/214 (1%)
Query 29 RAAPASAGSLGTLLDYAAGVIPASQIRAAGAVGAIRYVSDRRPGGAWMLGKPIQLSEARD 88
R P + G LG +LDY+AGV I+AAG +G+ YVSD+ G WM KP+ A
Sbjct 47 RPGPVNWG-LGKMLDYSAGVPAPEAIKAAGYLGSFCYVSDQAKGEEWMKAKPLTRPVADA 105
Query 89 LSGNGLKIVSCYQYGKGSTADWLGGASAGVQHARRGSELHAAAGGPTSAPIYASIDDNPS 148
+ +GL I S +Q+G +TADW G AGV+ ARR LH AAGGP A IYA +DD+P+
Sbjct 106 MRASGLIIASVWQWGGQTTADWRRGHDAGVKAARRAITLHQAAGGPDHAAIYACVDDDPT 165
Query 149 YEQYKNQIVPYLRSWESVIGHQRTGVYANSKTIDWAVNDGLGSYFWQHNWGSPKGYTHPA 208
+ +++ I YLR +E VIGH+R GV+ N KTIDW ++ GLG+YFWQH+W + HPA
Sbjct 166 PDLWEDSIADYLRGFEEVIGHERLGVFCNPKTIDWCLDAGLGTYFWQHDWNNDTLALHPA 225
Query 209 AHLHQVEIDKR---KVGGVGVDVNQILKPQFGQW 239
AHLHQ+ K +V V D +L FGQW
Sbjct 226 AHLHQLPGRKPWVVQVDNVECDQTAVLNMAFGQW 259
>gi|38233392|ref|NP_939159.1| hypothetical protein DIP0793 [Corynebacterium diphtheriae NCTC
13129]
gi|38199652|emb|CAE49311.1| Putative secreted protein [Corynebacterium diphtheriae]
Length=302
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/243 (47%), Positives = 145/243 (60%), Gaps = 9/243 (3%)
Query 2 SVSRRDVLKFAAATPGVLGLGV-VASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAV 60
S+SRR L A A G L V A + AAP GT++D+AAGV A I+ AG +
Sbjct 4 SISRRSFLTGAVAAIGGTALAVATAGTAHAAPGPI--RGTVIDFAAGVPSAQGIKNAGHL 61
Query 61 GAIRYVSDRRPGG-AWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQ 119
G++RYVS RRPG +WM GKP+ +E GL S YQ+GK +TADW GA+
Sbjct 62 GSVRYVSRRRPGTESWMTGKPVTATETHAAGAAGLLTASVYQFGKDATADWKQGAAGAAV 121
Query 120 HARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLR---SWESVIGHQRTGVYA 176
H + LH AAGGPT PIY +IDDNP+ +QY QI PYL+ + + G+Q G+Y
Sbjct 122 HVPQAIALHVAAGGPTRRPIYMAIDDNPTRQQYDTQIRPYLQASAAALNAAGYQ-LGIYG 180
Query 177 NSKTIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQF 236
N IDWA+ DGLG +FWQH+WGS +G HP +HQ +R + GV VDVN + +
Sbjct 181 NYNVIDWAIADGLGEFFWQHDWGS-QGRIHPRTTIHQKAGYQRVIDGVTVDVNNVYASDW 239
Query 237 GQW 239
GQW
Sbjct 240 GQW 242
Lambda K H
0.316 0.133 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 332206503090
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40