BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2530A
Length=74
Score E
Sequences producing significant alignments: (Bits) Value
gi|15842065|ref|NP_337102.1| hypothetical protein MT2606 [Mycoba... 141 4e-32
gi|289575235|ref|ZP_06455462.1| antitoxin [Mycobacterium tubercu... 139 1e-31
gi|340627507|ref|YP_004745959.1| hypothetical protein MCAN_25321... 71.2 4e-11
gi|15609630|ref|NP_217009.1| hypothetical protein Rv2493 [Mycoba... 70.9 7e-11
gi|289448138|ref|ZP_06437882.1| antitoxin [Mycobacterium tubercu... 70.1 1e-10
gi|241518560|ref|YP_002979188.1| hypothetical protein Rleg_5863 ... 68.6 3e-10
gi|16264147|ref|NP_436939.1| hypothetical protein SM_b20413 [Sin... 68.2 4e-10
gi|336038110|gb|AEH84040.1| hypothetical protein SM11_pD1208 [Si... 67.8 6e-10
gi|337267946|ref|YP_004612001.1| hypothetical protein Mesop_3461... 63.2 1e-08
gi|294339104|emb|CAZ87458.1| putative transcriptional regulator ... 59.7 1e-07
gi|344199816|ref|YP_004784142.1| hypothetical protein Acife_1683... 57.4 7e-07
gi|218458497|ref|ZP_03498588.1| hypothetical protein RetlK5_0316... 56.6 1e-06
gi|225874393|ref|YP_002755852.1| hypothetical protein ACP_2836 [... 56.2 1e-06
gi|87123103|ref|ZP_01078954.1| hypothetical protein RS9917_04570... 56.2 2e-06
gi|304413693|ref|ZP_07395137.1| hypothetical protein REG_0768 [C... 55.8 2e-06
gi|206601847|gb|EDZ38330.1| Hypothetical protein CGL2_11278039 [... 55.8 2e-06
gi|15827187|ref|NP_301450.1| hypothetical protein ML0525 [Mycoba... 55.5 3e-06
gi|196230684|ref|ZP_03129545.1| conserved hypothetical protein [... 47.0 0.001
gi|340358884|ref|ZP_08681387.1| hypothetical protein HMPREF9062_... 47.0 0.001
gi|325069051|ref|ZP_08127724.1| hypothetical protein AoriK_14579... 47.0 0.001
gi|113954589|ref|YP_729373.1| hypothetical protein sync_0136 [Sy... 46.6 0.001
gi|56478773|ref|YP_160362.1| hypothetical protein ebA5867 [Aroma... 46.2 0.002
gi|317967918|ref|ZP_07969308.1| hypothetical protein SCB02_00122... 45.8 0.002
gi|134291478|ref|YP_001115247.1| hypothetical protein Bcep1808_6... 43.9 0.008
gi|15610457|ref|NP_217838.1| hypothetical protein Rv3321c [Mycob... 43.1 0.015
gi|114331351|ref|YP_747573.1| hypothetical protein Neut_1360 [Ni... 42.7 0.017
gi|336179655|ref|YP_004585030.1| hypothetical protein FsymDg_383... 42.4 0.021
gi|87123275|ref|ZP_01079126.1| hypothetical protein RS9917_05430... 41.2 0.057
gi|334319153|ref|YP_004551712.1| hypothetical protein Sinme_6079... 39.7 0.17
gi|336035908|gb|AEH81839.1| hypothetical protein SM11_pC0766 [Si... 39.3 0.20
gi|330818819|ref|YP_004351036.1| hypothetical protein bgla_3p011... 38.9 0.28
gi|332321844|sp|P0CW33.1|VPB25_MYCTU RecName: Full=Antitoxin VapB25 37.7 0.53
gi|121636191|ref|YP_976414.1| antitoxin [Mycobacterium bovis BCG... 37.7 0.57
gi|15840019|ref|NP_335056.1| hypothetical protein MT0645.2 [Myco... 37.4 0.77
gi|298529362|ref|ZP_07016765.1| conserved hypothetical protein [... 37.0 0.99
gi|15610008|ref|NP_217387.1| hypothetical protein Rv2871 [Mycoba... 36.6 1.3
gi|254551940|ref|ZP_05142387.1| antitoxin [Mycobacterium tubercu... 36.6 1.3
gi|300780205|ref|ZP_07090061.1| toxin-antitoxin system [Coryneba... 35.8 2.0
gi|240169387|ref|ZP_04748046.1| hypothetical protein MkanA1_0874... 35.4 2.8
gi|311899907|dbj|BAJ32315.1| putative modular polyketide synthas... 34.7 4.4
gi|258593409|emb|CBE69748.1| conserved protein of unknown functi... 34.7 4.5
gi|86738905|ref|YP_479305.1| hypothetical protein Francci3_0184 ... 34.3 5.9
gi|336115787|ref|YP_004570553.1| hypothetical protein MLP_01360 ... 34.3 6.6
gi|157382509|gb|ABV48745.1| Rv2871 [Mycobacterium kansasii ATCC ... 34.3 6.8
>gi|15842065|ref|NP_337102.1| hypothetical protein MT2606 [Mycobacterium tuberculosis CDC1551]
gi|31793712|ref|NP_856205.1| hypothetical protein Mb2559Ac [Mycobacterium bovis AF2122/97]
gi|57116999|ref|YP_177672.1| hypothetical protein Rv2530A [Mycobacterium tuberculosis H37Rv]
68 more sequence titles
Length=74
Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/74 (100%), Positives = 74/74 (100%), Gaps = 0/74 (0%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVGIVEVDGFPVFDVPPDAPT 60
MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVGIVEVDGFPVFDVPPDAPT
Sbjct 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVGIVEVDGFPVFDVPPDAPT 60
Query 61 VTSEDVVRALEDDV 74
VTSEDVVRALEDDV
Sbjct 61 VTSEDVVRALEDDV 74
>gi|289575235|ref|ZP_06455462.1| antitoxin [Mycobacterium tuberculosis K85]
gi|339632557|ref|YP_004724199.1| hypothetical protein MAF_25460 [Mycobacterium africanum GM041182]
gi|289539666|gb|EFD44244.1| antitoxin [Mycobacterium tuberculosis K85]
gi|339331913|emb|CCC27616.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
Length=74
Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/74 (99%), Positives = 73/74 (99%), Gaps = 0/74 (0%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVGIVEVDGFPVFDVPPDAPT 60
MRTTLQIDDDVLED RSIARSEGKSVGAVISELARRSLRPVGIVEVDGFPVFDVPPDAPT
Sbjct 1 MRTTLQIDDDVLEDVRSIARSEGKSVGAVISELARRSLRPVGIVEVDGFPVFDVPPDAPT 60
Query 61 VTSEDVVRALEDDV 74
VTSEDVVRALEDDV
Sbjct 61 VTSEDVVRALEDDV 74
>gi|340627507|ref|YP_004745959.1| hypothetical protein MCAN_25321 [Mycobacterium canettii CIPT
140010059]
gi|340005697|emb|CCC44863.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=73
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/73 (55%), Positives = 50/73 (69%), Gaps = 0/73 (0%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVGIVEVDGFPVFDVPPDAPT 60
MRTTL +DDDV+ AR +A S+ +S+G+VISELARR L P I DG PV VP P
Sbjct 1 MRTTLDLDDDVIAAARELASSQRRSLGSVISELARRGLMPGRIEADDGLPVIRVPAGTPP 60
Query 61 VTSEDVVRALEDD 73
+T E V RAL++D
Sbjct 61 ITPEMVRRALDED 73
>gi|15609630|ref|NP_217009.1| hypothetical protein Rv2493 [Mycobacterium tuberculosis H37Rv]
gi|15842021|ref|NP_337058.1| hypothetical protein MT2568 [Mycobacterium tuberculosis CDC1551]
gi|31793673|ref|NP_856166.1| hypothetical protein Mb2521 [Mycobacterium bovis AF2122/97]
65 more sequence titles
Length=73
Score = 70.9 bits (172), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/73 (54%), Positives = 50/73 (69%), Gaps = 0/73 (0%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVGIVEVDGFPVFDVPPDAPT 60
MRTTL +DDDV+ AR +A S+ +S+G+VISELARR L P + DG PV VP P
Sbjct 1 MRTTLDLDDDVIAAARELASSQRRSLGSVISELARRGLMPGRVEADDGLPVIRVPAGTPP 60
Query 61 VTSEDVVRALEDD 73
+T E V RAL++D
Sbjct 61 ITPEMVRRALDED 73
>gi|289448138|ref|ZP_06437882.1| antitoxin [Mycobacterium tuberculosis CPHL_A]
gi|289421096|gb|EFD18297.1| antitoxin [Mycobacterium tuberculosis CPHL_A]
Length=73
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/73 (54%), Positives = 49/73 (68%), Gaps = 0/73 (0%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVGIVEVDGFPVFDVPPDAPT 60
MRTTL +DDDV+ AR +A S+ +S+G+VISELARR L P + DG PV VP P
Sbjct 1 MRTTLDLDDDVIAAARELASSQRRSLGSVISELARRGLMPGRVEADDGLPVIRVPAGTPP 60
Query 61 VTSEDVVRALEDD 73
+T E V RAL+ D
Sbjct 61 ITPEMVRRALDKD 73
>gi|241518560|ref|YP_002979188.1| hypothetical protein Rleg_5863 [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240862973|gb|ACS60637.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length=75
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/75 (54%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL-RPVGIVEVDGFPVFDVPPDAP 59
MRTTL IDDDVL A+++A + +SVG VISELARRSL RP E +G P+ PD P
Sbjct 1 MRTTLAIDDDVLTAAKAMATQQHRSVGEVISELARRSLRRPPSSGERNGIPLLSTRPDTP 60
Query 60 TVTSEDVVRALEDDV 74
VT E +V A+ D++
Sbjct 61 PVTLE-IVNAMRDEL 74
>gi|16264147|ref|NP_436939.1| hypothetical protein SM_b20413 [Sinorhizobium meliloti 1021]
gi|334319719|ref|YP_004556348.1| hypothetical protein Sinme_3766 [Sinorhizobium meliloti AK83]
gi|15140272|emb|CAC48799.1| HYPOTHETICAL PROTEIN SM_b20413 [Sinorhizobium meliloti 1021]
gi|333815878|gb|AEG08545.1| hypothetical protein SinmeB_4262 [Sinorhizobium meliloti BL225C]
gi|334097458|gb|AEG55468.1| hypothetical protein Sinme_3766 [Sinorhizobium meliloti AK83]
Length=75
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 52/75 (70%), Gaps = 2/75 (2%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL-RPVGIVEVDGFPVFDVPPDAP 59
MRTTL IDDDVL A+++A + +SVG VISELARRSL RP E +G P+ PDAP
Sbjct 1 MRTTLAIDDDVLIAAKAMATQQQRSVGEVISELARRSLRRPRSGGERNGIPLLSPRPDAP 60
Query 60 TVTSEDVVRALEDDV 74
VT E +V AL D++
Sbjct 61 PVTLE-IVNALRDEL 74
>gi|336038110|gb|AEH84040.1| hypothetical protein SM11_pD1208 [Sinorhizobium meliloti SM11]
Length=75
Score = 67.8 bits (164), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/74 (57%), Positives = 51/74 (69%), Gaps = 2/74 (2%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL-RPVGIVEVDGFPVFDVPPDAP 59
MRTTL IDDDVL A+++A + +SVG VISELARRSL RP E +G P+ PDAP
Sbjct 1 MRTTLAIDDDVLIAAKAMATQQQRSVGEVISELARRSLRRPRSGGERNGIPLLSPRPDAP 60
Query 60 TVTSEDVVRALEDD 73
VT E +V AL D+
Sbjct 61 PVTLE-IVNALRDE 73
>gi|337267946|ref|YP_004612001.1| hypothetical protein Mesop_3461 [Mesorhizobium opportunistum
WSM2075]
gi|336028256|gb|AEH87907.1| conserved hypothetical protein [Mesorhizobium opportunistum WSM2075]
Length=87
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/73 (48%), Positives = 49/73 (68%), Gaps = 1/73 (1%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL-RPVGIVEVDGFPVFDVPPDAP 59
MRTTL IDDDVL A+++AR + +S+G VIS+LAR+SL RP E +G P+ PD P
Sbjct 1 MRTTLAIDDDVLLAAKAMARQQDRSIGEVISDLARQSLRRPQAGGERNGIPLLSARPDDP 60
Query 60 TVTSEDVVRALED 72
+ +++ AL D
Sbjct 61 PLVDLEMINALRD 73
>gi|294339104|emb|CAZ87458.1| putative transcriptional regulator [Thiomonas sp. 3As]
Length=75
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL-RPVGIVEVDGFPVFDVPPDAP 59
MRTT+ IDDDVL AR +A + KSVG V+S LAR++L R + E +G P+ PDA
Sbjct 1 MRTTVSIDDDVLNAARHLAARQHKSVGEVLSALARQALRREPALAERNGVPLLASQPDAK 60
Query 60 TVTSEDVVRALEDDV 74
VT E +V L D++
Sbjct 61 PVTLE-LVNQLRDEL 74
>gi|344199816|ref|YP_004784142.1| hypothetical protein Acife_1683 [Acidithiobacillus ferrivorans
SS3]
gi|343775260|gb|AEM47816.1| hypothetical protein Acife_1683 [Acidithiobacillus ferrivorans
SS3]
Length=77
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/77 (47%), Positives = 48/77 (63%), Gaps = 4/77 (5%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRP---VGIVEVDGFPVFDVPPD 57
MRTTL IDDDVL A+ +A + KSVGAV+S L R++L+P G +G P+ V PD
Sbjct 1 MRTTLAIDDDVLAAAKGLADRQHKSVGAVVSALLRQALQPQNTSGGHSRNGIPLLPVRPD 60
Query 58 APTVTSEDVVRALEDDV 74
A T E +V L D++
Sbjct 61 ALPATLE-IVNQLRDEL 76
>gi|218458497|ref|ZP_03498588.1| hypothetical protein RetlK5_03168 [Rhizobium etli Kim 5]
Length=63
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/57 (57%), Positives = 39/57 (69%), Gaps = 1/57 (1%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL-RPVGIVEVDGFPVFDVPP 56
MRTTL IDDDVL A+++A + +SVG VISELARRSL RP E +G P+ P
Sbjct 7 MRTTLAIDDDVLIAAKAMATQQHRSVGEVISELARRSLRRPPSSGERNGIPLLSARP 63
>gi|225874393|ref|YP_002755852.1| hypothetical protein ACP_2836 [Acidobacterium capsulatum ATCC
51196]
gi|225793202|gb|ACO33292.1| conserved hypothetical protein [Acidobacterium capsulatum ATCC
51196]
Length=74
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL-RPVGIVEVDGFPVFDVPPDAP 59
MRTTL +DDDV E+ RS A + +G ++EL RR++ +P V+G VFD+P D+
Sbjct 1 MRTTLALDDDVFEEVRSYAEARDLPLGRAVTELLRRAMVQPAPTRRVNGLLVFDLPADSS 60
Query 60 TVTSEDVVRALEDDV 74
VT E +VR LE ++
Sbjct 61 PVTDE-MVRDLESEI 74
>gi|87123103|ref|ZP_01078954.1| hypothetical protein RS9917_04570 [Synechococcus sp. RS9917]
gi|86168823|gb|EAQ70079.1| hypothetical protein RS9917_04570 [Synechococcus sp. RS9917]
Length=79
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/59 (55%), Positives = 41/59 (70%), Gaps = 5/59 (8%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL-RPVGI----VEVDGFPVFDV 54
MRTTLQ+DDDVL+ AR +AR + SVG VISELAR++L RP G+ E G P+ +
Sbjct 1 MRTTLQLDDDVLDAARVLARQQHLSVGEVISELARQALRRPAGLEEPPSERSGLPLLPI 59
>gi|304413693|ref|ZP_07395137.1| hypothetical protein REG_0768 [Candidatus Regiella insecticola
LSR1]
gi|304283784|gb|EFL92178.1| hypothetical protein REG_0768 [Candidatus Regiella insecticola
LSR1]
Length=82
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/74 (45%), Positives = 46/74 (63%), Gaps = 1/74 (1%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVGIVEVDGFPVFDVPPDAPT 60
MRTTL IDDD+L A+ +A + KS+GAVIS LAR++L + +G P+ V D
Sbjct 9 MRTTLAIDDDILAAAKGLAARQNKSLGAVISSLARQALHVPSHPKRNGIPLLLVRSDGML 68
Query 61 VTSEDVVRALEDDV 74
VT E +V L D++
Sbjct 69 VTPE-LVNQLRDEL 81
>gi|206601847|gb|EDZ38330.1| Hypothetical protein CGL2_11278039 [Leptospirillum sp. Group
II '5-way CG']
Length=152
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 47/80 (59%), Gaps = 10/80 (12%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVG-------IVEVDGFPVFD 53
MRTTL ID+DVLE AR +AR +GKS+G VIS+L R++L + V V GF F
Sbjct 73 MRTTLDIDEDVLETARELARRQGKSIGKVISDLGRQALMEMSGRDLSSETVSVFGFRPF- 131
Query 54 VPPDAPTVTSEDVVRALEDD 73
P V + D + AL +D
Sbjct 132 --PKRGGVVTNDRIDALRED 149
>gi|15827187|ref|NP_301450.1| hypothetical protein ML0525 [Mycobacterium leprae TN]
gi|221229665|ref|YP_002503081.1| hypothetical protein MLBr_00525 [Mycobacterium leprae Br4923]
gi|13092735|emb|CAC30033.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219932772|emb|CAR70618.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=58
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/44 (64%), Positives = 32/44 (73%), Gaps = 0/44 (0%)
Query 16 RSIARSEGKSVGAVISELARRSLRPVGIVEVDGFPVFDVPPDAP 59
R+IA+ G SVG +IS LAR LRP G+VEVDG PV DVP AP
Sbjct 15 RNIAQPGGHSVGVMISGLARSPLRPGGVVEVDGLPVLDVPQPAP 58
>gi|196230684|ref|ZP_03129545.1| conserved hypothetical protein [Chthoniobacter flavus Ellin428]
gi|196225025|gb|EDY19534.1| conserved hypothetical protein [Chthoniobacter flavus Ellin428]
Length=80
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/80 (43%), Positives = 46/80 (58%), Gaps = 9/80 (11%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVGIVE------VDGFPVFDV 54
MRTTL ID DVL A+ I+ +SVG VIS+LAR +L G + ++GF V +
Sbjct 1 MRTTLDIDSDVLAAAKEISARTKRSVGHVISDLARAALLKRGKSKARISRMINGFEV--I 58
Query 55 PPDAPTVTSEDVVRALEDDV 74
D VTSE +VR L + +
Sbjct 59 SADGRVVTSE-LVRKLAEGM 77
>gi|340358884|ref|ZP_08681387.1| hypothetical protein HMPREF9062_0512 [Actinomyces sp. oral taxon
448 str. F0400]
gi|339885630|gb|EGQ75339.1| hypothetical protein HMPREF9062_0512 [Actinomyces sp. oral taxon
448 str. F0400]
Length=77
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/76 (47%), Positives = 41/76 (54%), Gaps = 3/76 (3%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVGI-VEVDGFPVFDVPPDAP 59
MRTTL IDD VL AR AR EG S+G +S+ A R +R G G PVF P P
Sbjct 1 MRTTLDIDDSVLAVAREKARREGLSLGRAVSDYALRGIRGGGPDAGSRGVPVFTPPQGGP 60
Query 60 --TVTSEDVVRALEDD 73
TVT + V R + D
Sbjct 61 PHTVTLDLVERHRDGD 76
>gi|325069051|ref|ZP_08127724.1| hypothetical protein AoriK_14579 [Actinomyces oris K20]
Length=76
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/76 (43%), Positives = 42/76 (56%), Gaps = 4/76 (5%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVGIVEVDGFPVFDVPP---D 57
MRTTL+IDD VL AR A +G S+G +S+LA R + G G P+F PP
Sbjct 1 MRTTLEIDDRVLSLARERAHRDGVSLGRAVSDLALRGISHGGRTSRHGIPLF-FPPAGQQ 59
Query 58 APTVTSEDVVRALEDD 73
A VT E + + +DD
Sbjct 60 AHVVTPELIEQYRDDD 75
>gi|113954589|ref|YP_729373.1| hypothetical protein sync_0136 [Synechococcus sp. CC9311]
gi|113881940|gb|ABI46898.1| conserved hypothetical protein [Synechococcus sp. CC9311]
Length=81
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/41 (64%), Positives = 33/41 (81%), Gaps = 1/41 (2%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL-RP 40
MRTTL++DDDVL AR +AR +SVG VIS+LAR++L RP
Sbjct 1 MRTTLRLDDDVLAAARVLARQRRRSVGDVISDLARQTLSRP 41
>gi|56478773|ref|YP_160362.1| hypothetical protein ebA5867 [Aromatoleum aromaticum EbN1]
gi|56314816|emb|CAI09461.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length=81
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/38 (61%), Positives = 28/38 (74%), Gaps = 0/38 (0%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL 38
MRTTL I+ DVL A+ IAR + SVG VIS+L RR+L
Sbjct 1 MRTTLDIESDVLAAAKEIARQQHTSVGKVISQLVRRTL 38
>gi|317967918|ref|ZP_07969308.1| hypothetical protein SCB02_00122 [Synechococcus sp. CB0205]
Length=86
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/38 (58%), Positives = 29/38 (77%), Gaps = 0/38 (0%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL 38
MRTTL +DDDVL A+ +AR + +G+VISELAR+ L
Sbjct 8 MRTTLSLDDDVLAAAKVLARQRKQPIGSVISELARQGL 45
>gi|134291478|ref|YP_001115247.1| hypothetical protein Bcep1808_6070 [Burkholderia vietnamiensis
G4]
gi|134134667|gb|ABO58992.1| conserved hypothetical protein [Burkholderia vietnamiensis G4]
Length=85
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/75 (46%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLR--PVGIVEVDGFPVFDVPPDA 58
MRTT+ IDDDVL AR A+ G S+G VIS+LAR +L+ +G P+ V A
Sbjct 11 MRTTIDIDDDVLAFARERAK-PGTSIGKVISDLARAALQRGTTNQSSRNGLPLMPVSATA 69
Query 59 PTVTSEDVVRALEDD 73
VT D V L DD
Sbjct 70 RPVT-LDTVNQLRDD 83
>gi|15610457|ref|NP_217838.1| hypothetical protein Rv3321c [Mycobacterium tuberculosis H37Rv]
gi|15842913|ref|NP_337950.1| CopG family DNA-binding protein [Mycobacterium tuberculosis CDC1551]
gi|31794502|ref|NP_856995.1| hypothetical protein Mb3350c [Mycobacterium bovis AF2122/97]
77 more sequence titles
Length=80
Score = 43.1 bits (100), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/78 (38%), Positives = 42/78 (54%), Gaps = 6/78 (7%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL-----RPVGIVEVDGFPVFDVP 55
MRTTL IDDDVL + AR E ++ G ++S+LAR++L +P E D F F+
Sbjct 1 MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQE-DAFHGFEPL 59
Query 56 PDAPTVTSEDVVRALEDD 73
P S ++ L D+
Sbjct 60 PHRGGAVSNALIDRLRDE 77
>gi|114331351|ref|YP_747573.1| hypothetical protein Neut_1360 [Nitrosomonas eutropha C91]
gi|114308365|gb|ABI59608.1| conserved hypothetical protein [Nitrosomonas eutropha C91]
Length=92
Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/81 (38%), Positives = 43/81 (54%), Gaps = 11/81 (13%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL--------RPVGIVEVDGFPVF 52
+RTT+ I++DVL A+ IAR+E SVG VIS L R++L P V GF F
Sbjct 12 VRTTIDIENDVLAAAKEIARTENVSVGKVISRLVRQALAGHVAEVSSPDDASSVTGFRPF 71
Query 53 DVPPDAPTVTSEDVVRALEDD 73
P + S +++ L D+
Sbjct 72 ---PSRGVIVSNELINRLRDE 89
>gi|336179655|ref|YP_004585030.1| hypothetical protein FsymDg_3832 [Frankia symbiont of Datisca
glomerata]
gi|334860635|gb|AEH11109.1| hypothetical protein, antitoxin [Frankia symbiont of Datisca
glomerata]
Length=84
Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/78 (39%), Positives = 43/78 (56%), Gaps = 9/78 (11%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVGIVEVD-----GFPVFDVP 55
MRTT+ + DD+ A SIAR +++ +++L RR L G EV G PV +
Sbjct 1 MRTTIDLSDDLHRQALSIARGTRRTLSDTVADLIRRGLGQSGAAEVSRSERTGLPVVRL- 59
Query 56 PDAPTVTSEDVVRALEDD 73
+TSED VRA++DD
Sbjct 60 --GTVITSED-VRAMDDD 74
>gi|87123275|ref|ZP_01079126.1| hypothetical protein RS9917_05430 [Synechococcus sp. RS9917]
gi|86168995|gb|EAQ70251.1| hypothetical protein RS9917_05430 [Synechococcus sp. RS9917]
Length=82
Score = 41.2 bits (95), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 28/38 (74%), Gaps = 0/38 (0%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL 38
MRTTL IDDD+L+ A+ +A+ + S G V+S L R++L
Sbjct 1 MRTTLDIDDDLLQAAKDLAKQQRMSAGQVVSTLLRQAL 38
>gi|334319153|ref|YP_004551712.1| hypothetical protein Sinme_6079 [Sinorhizobium meliloti AK83]
gi|333814848|gb|AEG07516.1| hypothetical protein SinmeB_6397 [Sinorhizobium meliloti BL225C]
gi|334099580|gb|AEG57589.1| hypothetical protein Sinme_6079 [Sinorhizobium meliloti AK83]
Length=47
Score = 39.7 bits (91), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/35 (58%), Positives = 26/35 (75%), Gaps = 0/35 (0%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELAR 35
MRTTL I+DDV AR++A + + +G VISELAR
Sbjct 1 MRTTLSIEDDVRIAARAMATQQQQRIGEVISELAR 35
>gi|336035908|gb|AEH81839.1| hypothetical protein SM11_pC0766 [Sinorhizobium meliloti SM11]
Length=54
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/35 (58%), Positives = 26/35 (75%), Gaps = 0/35 (0%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELAR 35
MRTTL I+DDV AR++A + + +G VISELAR
Sbjct 8 MRTTLSIEDDVRIAARAMATQQQQRIGEVISELAR 42
>gi|330818819|ref|YP_004351036.1| hypothetical protein bgla_3p0110 [Burkholderia gladioli BSR3]
gi|327374361|gb|AEA65713.1| hypothetical protein bgla_3p0110 [Burkholderia gladioli BSR3]
Length=73
Score = 38.9 bits (89), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 46/75 (62%), Gaps = 6/75 (8%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVGIVEV--DGFPVFDVPPDA 58
MRTTL+IDDDVL AR+ A E S+G +IS+LAR +L+P +G PV P A
Sbjct 1 MRTTLEIDDDVLALARARADREHVSIGRIISQLARAALQPAAAAPTTRNGLPVL---PSA 57
Query 59 PTVTSEDVVRALEDD 73
TVT E +V L D+
Sbjct 58 RTVTPE-LVNQLRDE 71
>gi|332321844|sp|P0CW33.1|VPB25_MYCTU RecName: Full=Antitoxin VapB25
Length=85
Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (69%), Gaps = 0/38 (0%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL 38
MRTT+ I D++L A+ AR G+S+GAVI + RR L
Sbjct 1 MRTTVSISDELLATAKRRARERGQSLGAVIEDALRREL 38
>gi|121636191|ref|YP_976414.1| antitoxin [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224988664|ref|YP_002643351.1| hypothetical protein, antitoxin [Mycobacterium bovis BCG str.
Tokyo 172]
gi|121491838|emb|CAL70300.1| Conserved hypothetical protein, antitoxin [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|224771777|dbj|BAH24583.1| hypothetical protein, antitoxin [Mycobacterium bovis BCG str.
Tokyo 172]
gi|341600207|emb|CCC62876.1| conserved hypothetical protein, antitoxin [Mycobacterium bovis
BCG str. Moreau RDJ]
Length=85
Score = 37.7 bits (86), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (69%), Gaps = 0/38 (0%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL 38
MRTT+ I D++L A+ AR G+S+GAVI + RR L
Sbjct 1 MRTTVSISDELLATAKRRARERGQSLGAVIEDALRREL 38
>gi|15840019|ref|NP_335056.1| hypothetical protein MT0645.2 [Mycobacterium tuberculosis CDC1551]
gi|121636536|ref|YP_976759.1| antitoxin [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|167969042|ref|ZP_02551319.1| hypothetical protein MtubH3_13852 [Mycobacterium tuberculosis
H37Ra]
56 more sequence titles
Length=75
Score = 37.4 bits (85), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 28/78 (36%), Positives = 43/78 (56%), Gaps = 9/78 (11%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL---RPVGIVE--VDGFPVFDVP 55
MRTT+ + D+ + A +IAR +++ +++L RR L RP + G P+ V
Sbjct 1 MRTTIDLPQDLHKQALAIARDTHRTLSETVADLMRRGLAANRPTALSSDPRTGLPLVSV- 59
Query 56 PDAPTVTSEDVVRALEDD 73
VTSED VR+LED+
Sbjct 60 --GTVVTSED-VRSLEDE 74
>gi|298529362|ref|ZP_07016765.1| conserved hypothetical protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298510798|gb|EFI34701.1| conserved hypothetical protein [Desulfonatronospira thiodismutans
ASO3-1]
Length=81
Score = 37.0 bits (84), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/41 (52%), Positives = 25/41 (61%), Gaps = 0/41 (0%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPV 41
MRTTL ID+DVLE AR++A VI+E R LR V
Sbjct 1 MRTTLAIDNDVLEKARALAARRKIPFKTVINEALRAGLREV 41
>gi|15610008|ref|NP_217387.1| hypothetical protein Rv2871 [Mycobacterium tuberculosis H37Rv]
gi|31794048|ref|NP_856541.1| hypothetical protein Mb2896 [Mycobacterium bovis AF2122/97]
gi|121638753|ref|YP_978977.1| hypothetical protein BCG_2893 [Mycobacterium bovis BCG str. Pasteur
1173P2]
73 more sequence titles
Length=85
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (68%), Gaps = 0/40 (0%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRP 40
MRTT++IDD++ + ++ A G++V AV+ + RR L P
Sbjct 1 MRTTIRIDDELYREVKAKAARSGRTVAAVLEDAVRRGLNP 40
>gi|254551940|ref|ZP_05142387.1| antitoxin [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=85
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (68%), Gaps = 0/40 (0%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRP 40
MRTT++IDD++ + ++ A G++V AV+ + RR L P
Sbjct 1 MRTTIRIDDELYREVKAKAARSGRTVAAVLEDAVRRGLNP 40
>gi|300780205|ref|ZP_07090061.1| toxin-antitoxin system [Corynebacterium genitalium ATCC 33030]
gi|300534315|gb|EFK55374.1| toxin-antitoxin system [Corynebacterium genitalium ATCC 33030]
Length=80
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/38 (45%), Positives = 27/38 (72%), Gaps = 0/38 (0%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL 38
MR T+++D++V AR+IA +G SVG +++LAR L
Sbjct 1 MRLTIRLDEEVYTAARAIAAEKGTSVGEAVNDLARAGL 38
>gi|240169387|ref|ZP_04748046.1| hypothetical protein MkanA1_08743 [Mycobacterium kansasii ATCC
12478]
Length=75
Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/78 (36%), Positives = 44/78 (57%), Gaps = 9/78 (11%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVGIVEVD-----GFPVFDVP 55
MRTT+ + DD+ + A +IAR +++ +++L RR L G + G P+ +V
Sbjct 1 MRTTIDLPDDLHKQALAIARDTRRTLSETVADLMRRGLGAGGAAAISTDPRTGLPLVNV- 59
Query 56 PDAPTVTSEDVVRALEDD 73
VTSED VR+LED+
Sbjct 60 --GKVVTSED-VRSLEDE 74
>gi|311899907|dbj|BAJ32315.1| putative modular polyketide synthase [Kitasatospora setae KM-6054]
Length=1351
Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/35 (52%), Positives = 24/35 (69%), Gaps = 1/35 (2%)
Query 18 IARSEGKSVG-AVISELARRSLRPVGIVEVDGFPV 51
+ RS G V AV +EL RR +RP+G+V VD FP+
Sbjct 1198 LGRSLGGCVAHAVTAELERRGVRPLGLVLVDSFPM 1232
>gi|258593409|emb|CBE69748.1| conserved protein of unknown function [NC10 bacterium 'Dutch
sediment']
Length=81
Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/38 (43%), Positives = 27/38 (72%), Gaps = 0/38 (0%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL 38
M+TT+++ D +L DAR +A +EG ++ A++ E RR L
Sbjct 1 MKTTIEVTDTLLRDARQLAANEGTTLRALVEEGLRRIL 38
>gi|86738905|ref|YP_479305.1| hypothetical protein Francci3_0184 [Frankia sp. CcI3]
gi|86565767|gb|ABD09576.1| hypothetical protein Francci3_0184 [Frankia sp. CcI3]
Length=184
Score = 34.3 bits (77), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/64 (38%), Positives = 33/64 (52%), Gaps = 10/64 (15%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL---RPVGIVEVDGFPVFD--VP 55
MRTT+ + DD+ A SIAR +++ ++L RR L RP + FD VP
Sbjct 1 MRTTIDLPDDLHRQAMSIARDTSRTLSETAADLMRRGLGQGRP-----THAYLPFDLTVP 55
Query 56 PDAP 59
PD P
Sbjct 56 PDTP 59
>gi|336115787|ref|YP_004570553.1| hypothetical protein MLP_01360 [Microlunatus phosphovorus NM-1]
gi|334683565|dbj|BAK33150.1| hypothetical protein MLP_01360 [Microlunatus phosphovorus NM-1]
Length=75
Score = 34.3 bits (77), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVG--IVEVDGFPVFDVPPDA 58
MRTTL +D VL AR+ A +E S+G +SELA LR GFPV P
Sbjct 1 MRTTLDLDPVVLSAARAKAAAERISLGKAVSELALSGLRAPSSQFTTASGFPVLSGVPGR 60
Query 59 PTVTSEDVVRALEDD 73
P ++++V A DD
Sbjct 61 P--VTDELVAAHRDD 73
>gi|157382509|gb|ABV48745.1| Rv2871 [Mycobacterium kansasii ATCC 12478]
Length=85
Score = 34.3 bits (77), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/42 (39%), Positives = 27/42 (65%), Gaps = 0/42 (0%)
Query 1 MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVG 42
MRTT++IDD++ + ++ A G++V AV+ + R L P G
Sbjct 1 MRTTIRIDDELYREVKARAARSGRTVAAVLEDAVRCGLNPPG 42
Lambda K H
0.315 0.135 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 131500792262
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40