BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2530A

Length=74
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15842065|ref|NP_337102.1|  hypothetical protein MT2606 [Mycoba...   141    4e-32
gi|289575235|ref|ZP_06455462.1|  antitoxin [Mycobacterium tubercu...   139    1e-31
gi|340627507|ref|YP_004745959.1|  hypothetical protein MCAN_25321...  71.2    4e-11
gi|15609630|ref|NP_217009.1|  hypothetical protein Rv2493 [Mycoba...  70.9    7e-11
gi|289448138|ref|ZP_06437882.1|  antitoxin [Mycobacterium tubercu...  70.1    1e-10
gi|241518560|ref|YP_002979188.1|  hypothetical protein Rleg_5863 ...  68.6    3e-10
gi|16264147|ref|NP_436939.1|  hypothetical protein SM_b20413 [Sin...  68.2    4e-10
gi|336038110|gb|AEH84040.1|  hypothetical protein SM11_pD1208 [Si...  67.8    6e-10
gi|337267946|ref|YP_004612001.1|  hypothetical protein Mesop_3461...  63.2    1e-08
gi|294339104|emb|CAZ87458.1|  putative transcriptional regulator ...  59.7    1e-07
gi|344199816|ref|YP_004784142.1|  hypothetical protein Acife_1683...  57.4    7e-07
gi|218458497|ref|ZP_03498588.1|  hypothetical protein RetlK5_0316...  56.6    1e-06
gi|225874393|ref|YP_002755852.1|  hypothetical protein ACP_2836 [...  56.2    1e-06
gi|87123103|ref|ZP_01078954.1|  hypothetical protein RS9917_04570...  56.2    2e-06
gi|304413693|ref|ZP_07395137.1|  hypothetical protein REG_0768 [C...  55.8    2e-06
gi|206601847|gb|EDZ38330.1|  Hypothetical protein CGL2_11278039 [...  55.8    2e-06
gi|15827187|ref|NP_301450.1|  hypothetical protein ML0525 [Mycoba...  55.5    3e-06
gi|196230684|ref|ZP_03129545.1|  conserved hypothetical protein [...  47.0    0.001
gi|340358884|ref|ZP_08681387.1|  hypothetical protein HMPREF9062_...  47.0    0.001
gi|325069051|ref|ZP_08127724.1|  hypothetical protein AoriK_14579...  47.0    0.001
gi|113954589|ref|YP_729373.1|  hypothetical protein sync_0136 [Sy...  46.6    0.001
gi|56478773|ref|YP_160362.1|  hypothetical protein ebA5867 [Aroma...  46.2    0.002
gi|317967918|ref|ZP_07969308.1|  hypothetical protein SCB02_00122...  45.8    0.002
gi|134291478|ref|YP_001115247.1|  hypothetical protein Bcep1808_6...  43.9    0.008
gi|15610457|ref|NP_217838.1|  hypothetical protein Rv3321c [Mycob...  43.1    0.015
gi|114331351|ref|YP_747573.1|  hypothetical protein Neut_1360 [Ni...  42.7    0.017
gi|336179655|ref|YP_004585030.1|  hypothetical protein FsymDg_383...  42.4    0.021
gi|87123275|ref|ZP_01079126.1|  hypothetical protein RS9917_05430...  41.2    0.057
gi|334319153|ref|YP_004551712.1|  hypothetical protein Sinme_6079...  39.7    0.17 
gi|336035908|gb|AEH81839.1|  hypothetical protein SM11_pC0766 [Si...  39.3    0.20 
gi|330818819|ref|YP_004351036.1|  hypothetical protein bgla_3p011...  38.9    0.28 
gi|332321844|sp|P0CW33.1|VPB25_MYCTU  RecName: Full=Antitoxin VapB25  37.7    0.53 
gi|121636191|ref|YP_976414.1|  antitoxin [Mycobacterium bovis BCG...  37.7    0.57 
gi|15840019|ref|NP_335056.1|  hypothetical protein MT0645.2 [Myco...  37.4    0.77 
gi|298529362|ref|ZP_07016765.1|  conserved hypothetical protein [...  37.0    0.99 
gi|15610008|ref|NP_217387.1|  hypothetical protein Rv2871 [Mycoba...  36.6    1.3  
gi|254551940|ref|ZP_05142387.1|  antitoxin [Mycobacterium tubercu...  36.6    1.3  
gi|300780205|ref|ZP_07090061.1|  toxin-antitoxin system [Coryneba...  35.8    2.0  
gi|240169387|ref|ZP_04748046.1|  hypothetical protein MkanA1_0874...  35.4    2.8  
gi|311899907|dbj|BAJ32315.1|  putative modular polyketide synthas...  34.7    4.4  
gi|258593409|emb|CBE69748.1|  conserved protein of unknown functi...  34.7    4.5  
gi|86738905|ref|YP_479305.1|  hypothetical protein Francci3_0184 ...  34.3    5.9  
gi|336115787|ref|YP_004570553.1|  hypothetical protein MLP_01360 ...  34.3    6.6  
gi|157382509|gb|ABV48745.1|  Rv2871 [Mycobacterium kansasii ATCC ...  34.3    6.8  


>gi|15842065|ref|NP_337102.1| hypothetical protein MT2606 [Mycobacterium tuberculosis CDC1551]
 gi|31793712|ref|NP_856205.1| hypothetical protein Mb2559Ac [Mycobacterium bovis AF2122/97]
 gi|57116999|ref|YP_177672.1| hypothetical protein Rv2530A [Mycobacterium tuberculosis H37Rv]
 68 more sequence titles
 Length=74

 Score =  141 bits (355),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 74/74 (100%), Positives = 74/74 (100%), Gaps = 0/74 (0%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVGIVEVDGFPVFDVPPDAPT  60
           MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVGIVEVDGFPVFDVPPDAPT
Sbjct  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVGIVEVDGFPVFDVPPDAPT  60

Query  61  VTSEDVVRALEDDV  74
           VTSEDVVRALEDDV
Sbjct  61  VTSEDVVRALEDDV  74


>gi|289575235|ref|ZP_06455462.1| antitoxin [Mycobacterium tuberculosis K85]
 gi|339632557|ref|YP_004724199.1| hypothetical protein MAF_25460 [Mycobacterium africanum GM041182]
 gi|289539666|gb|EFD44244.1| antitoxin [Mycobacterium tuberculosis K85]
 gi|339331913|emb|CCC27616.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
Length=74

 Score =  139 bits (350),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 73/74 (99%), Positives = 73/74 (99%), Gaps = 0/74 (0%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVGIVEVDGFPVFDVPPDAPT  60
           MRTTLQIDDDVLED RSIARSEGKSVGAVISELARRSLRPVGIVEVDGFPVFDVPPDAPT
Sbjct  1   MRTTLQIDDDVLEDVRSIARSEGKSVGAVISELARRSLRPVGIVEVDGFPVFDVPPDAPT  60

Query  61  VTSEDVVRALEDDV  74
           VTSEDVVRALEDDV
Sbjct  61  VTSEDVVRALEDDV  74


>gi|340627507|ref|YP_004745959.1| hypothetical protein MCAN_25321 [Mycobacterium canettii CIPT 
140010059]
 gi|340005697|emb|CCC44863.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=73

 Score = 71.2 bits (173),  Expect = 4e-11, Method: Compositional matrix adjust.
 Identities = 40/73 (55%), Positives = 50/73 (69%), Gaps = 0/73 (0%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVGIVEVDGFPVFDVPPDAPT  60
           MRTTL +DDDV+  AR +A S+ +S+G+VISELARR L P  I   DG PV  VP   P 
Sbjct  1   MRTTLDLDDDVIAAARELASSQRRSLGSVISELARRGLMPGRIEADDGLPVIRVPAGTPP  60

Query  61  VTSEDVVRALEDD  73
           +T E V RAL++D
Sbjct  61  ITPEMVRRALDED  73


>gi|15609630|ref|NP_217009.1| hypothetical protein Rv2493 [Mycobacterium tuberculosis H37Rv]
 gi|15842021|ref|NP_337058.1| hypothetical protein MT2568 [Mycobacterium tuberculosis CDC1551]
 gi|31793673|ref|NP_856166.1| hypothetical protein Mb2521 [Mycobacterium bovis AF2122/97]
 65 more sequence titles
 Length=73

 Score = 70.9 bits (172),  Expect = 7e-11, Method: Compositional matrix adjust.
 Identities = 39/73 (54%), Positives = 50/73 (69%), Gaps = 0/73 (0%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVGIVEVDGFPVFDVPPDAPT  60
           MRTTL +DDDV+  AR +A S+ +S+G+VISELARR L P  +   DG PV  VP   P 
Sbjct  1   MRTTLDLDDDVIAAARELASSQRRSLGSVISELARRGLMPGRVEADDGLPVIRVPAGTPP  60

Query  61  VTSEDVVRALEDD  73
           +T E V RAL++D
Sbjct  61  ITPEMVRRALDED  73


>gi|289448138|ref|ZP_06437882.1| antitoxin [Mycobacterium tuberculosis CPHL_A]
 gi|289421096|gb|EFD18297.1| antitoxin [Mycobacterium tuberculosis CPHL_A]
Length=73

 Score = 70.1 bits (170),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 39/73 (54%), Positives = 49/73 (68%), Gaps = 0/73 (0%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVGIVEVDGFPVFDVPPDAPT  60
           MRTTL +DDDV+  AR +A S+ +S+G+VISELARR L P  +   DG PV  VP   P 
Sbjct  1   MRTTLDLDDDVIAAARELASSQRRSLGSVISELARRGLMPGRVEADDGLPVIRVPAGTPP  60

Query  61  VTSEDVVRALEDD  73
           +T E V RAL+ D
Sbjct  61  ITPEMVRRALDKD  73


>gi|241518560|ref|YP_002979188.1| hypothetical protein Rleg_5863 [Rhizobium leguminosarum bv. trifolii 
WSM1325]
 gi|240862973|gb|ACS60637.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii 
WSM1325]
Length=75

 Score = 68.6 bits (166),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 40/75 (54%), Positives = 51/75 (68%), Gaps = 2/75 (2%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL-RPVGIVEVDGFPVFDVPPDAP  59
           MRTTL IDDDVL  A+++A  + +SVG VISELARRSL RP    E +G P+    PD P
Sbjct  1   MRTTLAIDDDVLTAAKAMATQQHRSVGEVISELARRSLRRPPSSGERNGIPLLSTRPDTP  60

Query  60  TVTSEDVVRALEDDV  74
            VT E +V A+ D++
Sbjct  61  PVTLE-IVNAMRDEL  74


>gi|16264147|ref|NP_436939.1| hypothetical protein SM_b20413 [Sinorhizobium meliloti 1021]
 gi|334319719|ref|YP_004556348.1| hypothetical protein Sinme_3766 [Sinorhizobium meliloti AK83]
 gi|15140272|emb|CAC48799.1| HYPOTHETICAL PROTEIN SM_b20413 [Sinorhizobium meliloti 1021]
 gi|333815878|gb|AEG08545.1| hypothetical protein SinmeB_4262 [Sinorhizobium meliloti BL225C]
 gi|334097458|gb|AEG55468.1| hypothetical protein Sinme_3766 [Sinorhizobium meliloti AK83]
Length=75

 Score = 68.2 bits (165),  Expect = 4e-10, Method: Compositional matrix adjust.
 Identities = 42/75 (56%), Positives = 52/75 (70%), Gaps = 2/75 (2%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL-RPVGIVEVDGFPVFDVPPDAP  59
           MRTTL IDDDVL  A+++A  + +SVG VISELARRSL RP    E +G P+    PDAP
Sbjct  1   MRTTLAIDDDVLIAAKAMATQQQRSVGEVISELARRSLRRPRSGGERNGIPLLSPRPDAP  60

Query  60  TVTSEDVVRALEDDV  74
            VT E +V AL D++
Sbjct  61  PVTLE-IVNALRDEL  74


>gi|336038110|gb|AEH84040.1| hypothetical protein SM11_pD1208 [Sinorhizobium meliloti SM11]
Length=75

 Score = 67.8 bits (164),  Expect = 6e-10, Method: Compositional matrix adjust.
 Identities = 42/74 (57%), Positives = 51/74 (69%), Gaps = 2/74 (2%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL-RPVGIVEVDGFPVFDVPPDAP  59
           MRTTL IDDDVL  A+++A  + +SVG VISELARRSL RP    E +G P+    PDAP
Sbjct  1   MRTTLAIDDDVLIAAKAMATQQQRSVGEVISELARRSLRRPRSGGERNGIPLLSPRPDAP  60

Query  60  TVTSEDVVRALEDD  73
            VT E +V AL D+
Sbjct  61  PVTLE-IVNALRDE  73


>gi|337267946|ref|YP_004612001.1| hypothetical protein Mesop_3461 [Mesorhizobium opportunistum 
WSM2075]
 gi|336028256|gb|AEH87907.1| conserved hypothetical protein [Mesorhizobium opportunistum WSM2075]
Length=87

 Score = 63.2 bits (152),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 35/73 (48%), Positives = 49/73 (68%), Gaps = 1/73 (1%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL-RPVGIVEVDGFPVFDVPPDAP  59
           MRTTL IDDDVL  A+++AR + +S+G VIS+LAR+SL RP    E +G P+    PD P
Sbjct  1   MRTTLAIDDDVLLAAKAMARQQDRSIGEVISDLARQSLRRPQAGGERNGIPLLSARPDDP  60

Query  60  TVTSEDVVRALED  72
            +   +++ AL D
Sbjct  61  PLVDLEMINALRD  73


>gi|294339104|emb|CAZ87458.1| putative transcriptional regulator [Thiomonas sp. 3As]
Length=75

 Score = 59.7 bits (143),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 2/75 (2%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL-RPVGIVEVDGFPVFDVPPDAP  59
           MRTT+ IDDDVL  AR +A  + KSVG V+S LAR++L R   + E +G P+    PDA 
Sbjct  1   MRTTVSIDDDVLNAARHLAARQHKSVGEVLSALARQALRREPALAERNGVPLLASQPDAK  60

Query  60  TVTSEDVVRALEDDV  74
            VT E +V  L D++
Sbjct  61  PVTLE-LVNQLRDEL  74


>gi|344199816|ref|YP_004784142.1| hypothetical protein Acife_1683 [Acidithiobacillus ferrivorans 
SS3]
 gi|343775260|gb|AEM47816.1| hypothetical protein Acife_1683 [Acidithiobacillus ferrivorans 
SS3]
Length=77

 Score = 57.4 bits (137),  Expect = 7e-07, Method: Compositional matrix adjust.
 Identities = 36/77 (47%), Positives = 48/77 (63%), Gaps = 4/77 (5%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRP---VGIVEVDGFPVFDVPPD  57
           MRTTL IDDDVL  A+ +A  + KSVGAV+S L R++L+P    G    +G P+  V PD
Sbjct  1   MRTTLAIDDDVLAAAKGLADRQHKSVGAVVSALLRQALQPQNTSGGHSRNGIPLLPVRPD  60

Query  58  APTVTSEDVVRALEDDV  74
           A   T E +V  L D++
Sbjct  61  ALPATLE-IVNQLRDEL  76


>gi|218458497|ref|ZP_03498588.1| hypothetical protein RetlK5_03168 [Rhizobium etli Kim 5]
Length=63

 Score = 56.6 bits (135),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 32/57 (57%), Positives = 39/57 (69%), Gaps = 1/57 (1%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL-RPVGIVEVDGFPVFDVPP  56
           MRTTL IDDDVL  A+++A  + +SVG VISELARRSL RP    E +G P+    P
Sbjct  7   MRTTLAIDDDVLIAAKAMATQQHRSVGEVISELARRSLRRPPSSGERNGIPLLSARP  63


>gi|225874393|ref|YP_002755852.1| hypothetical protein ACP_2836 [Acidobacterium capsulatum ATCC 
51196]
 gi|225793202|gb|ACO33292.1| conserved hypothetical protein [Acidobacterium capsulatum ATCC 
51196]
Length=74

 Score = 56.2 bits (134),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 2/75 (2%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL-RPVGIVEVDGFPVFDVPPDAP  59
           MRTTL +DDDV E+ RS A +    +G  ++EL RR++ +P     V+G  VFD+P D+ 
Sbjct  1   MRTTLALDDDVFEEVRSYAEARDLPLGRAVTELLRRAMVQPAPTRRVNGLLVFDLPADSS  60

Query  60  TVTSEDVVRALEDDV  74
            VT E +VR LE ++
Sbjct  61  PVTDE-MVRDLESEI  74


>gi|87123103|ref|ZP_01078954.1| hypothetical protein RS9917_04570 [Synechococcus sp. RS9917]
 gi|86168823|gb|EAQ70079.1| hypothetical protein RS9917_04570 [Synechococcus sp. RS9917]
Length=79

 Score = 56.2 bits (134),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 32/59 (55%), Positives = 41/59 (70%), Gaps = 5/59 (8%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL-RPVGI----VEVDGFPVFDV  54
           MRTTLQ+DDDVL+ AR +AR +  SVG VISELAR++L RP G+     E  G P+  +
Sbjct  1   MRTTLQLDDDVLDAARVLARQQHLSVGEVISELARQALRRPAGLEEPPSERSGLPLLPI  59


>gi|304413693|ref|ZP_07395137.1| hypothetical protein REG_0768 [Candidatus Regiella insecticola 
LSR1]
 gi|304283784|gb|EFL92178.1| hypothetical protein REG_0768 [Candidatus Regiella insecticola 
LSR1]
Length=82

 Score = 55.8 bits (133),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 33/74 (45%), Positives = 46/74 (63%), Gaps = 1/74 (1%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVGIVEVDGFPVFDVPPDAPT  60
           MRTTL IDDD+L  A+ +A  + KS+GAVIS LAR++L      + +G P+  V  D   
Sbjct  9   MRTTLAIDDDILAAAKGLAARQNKSLGAVISSLARQALHVPSHPKRNGIPLLLVRSDGML  68

Query  61  VTSEDVVRALEDDV  74
           VT E +V  L D++
Sbjct  69  VTPE-LVNQLRDEL  81


>gi|206601847|gb|EDZ38330.1| Hypothetical protein CGL2_11278039 [Leptospirillum sp. Group 
II '5-way CG']
Length=152

 Score = 55.8 bits (133),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 36/80 (45%), Positives = 47/80 (59%), Gaps = 10/80 (12%)

Query  1    MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVG-------IVEVDGFPVFD  53
            MRTTL ID+DVLE AR +AR +GKS+G VIS+L R++L  +         V V GF  F 
Sbjct  73   MRTTLDIDEDVLETARELARRQGKSIGKVISDLGRQALMEMSGRDLSSETVSVFGFRPF-  131

Query  54   VPPDAPTVTSEDVVRALEDD  73
              P    V + D + AL +D
Sbjct  132  --PKRGGVVTNDRIDALRED  149


>gi|15827187|ref|NP_301450.1| hypothetical protein ML0525 [Mycobacterium leprae TN]
 gi|221229665|ref|YP_002503081.1| hypothetical protein MLBr_00525 [Mycobacterium leprae Br4923]
 gi|13092735|emb|CAC30033.1| conserved hypothetical protein [Mycobacterium leprae]
 gi|219932772|emb|CAR70618.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=58

 Score = 55.5 bits (132),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 28/44 (64%), Positives = 32/44 (73%), Gaps = 0/44 (0%)

Query  16  RSIARSEGKSVGAVISELARRSLRPVGIVEVDGFPVFDVPPDAP  59
           R+IA+  G SVG +IS LAR  LRP G+VEVDG PV DVP  AP
Sbjct  15  RNIAQPGGHSVGVMISGLARSPLRPGGVVEVDGLPVLDVPQPAP  58


>gi|196230684|ref|ZP_03129545.1| conserved hypothetical protein [Chthoniobacter flavus Ellin428]
 gi|196225025|gb|EDY19534.1| conserved hypothetical protein [Chthoniobacter flavus Ellin428]
Length=80

 Score = 47.0 bits (110),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 34/80 (43%), Positives = 46/80 (58%), Gaps = 9/80 (11%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVGIVE------VDGFPVFDV  54
           MRTTL ID DVL  A+ I+    +SVG VIS+LAR +L   G  +      ++GF V  +
Sbjct  1   MRTTLDIDSDVLAAAKEISARTKRSVGHVISDLARAALLKRGKSKARISRMINGFEV--I  58

Query  55  PPDAPTVTSEDVVRALEDDV  74
             D   VTSE +VR L + +
Sbjct  59  SADGRVVTSE-LVRKLAEGM  77


>gi|340358884|ref|ZP_08681387.1| hypothetical protein HMPREF9062_0512 [Actinomyces sp. oral taxon 
448 str. F0400]
 gi|339885630|gb|EGQ75339.1| hypothetical protein HMPREF9062_0512 [Actinomyces sp. oral taxon 
448 str. F0400]
Length=77

 Score = 47.0 bits (110),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 35/76 (47%), Positives = 41/76 (54%), Gaps = 3/76 (3%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVGI-VEVDGFPVFDVPPDAP  59
           MRTTL IDD VL  AR  AR EG S+G  +S+ A R +R  G      G PVF  P   P
Sbjct  1   MRTTLDIDDSVLAVAREKARREGLSLGRAVSDYALRGIRGGGPDAGSRGVPVFTPPQGGP  60

Query  60  --TVTSEDVVRALEDD  73
             TVT + V R  + D
Sbjct  61  PHTVTLDLVERHRDGD  76


>gi|325069051|ref|ZP_08127724.1| hypothetical protein AoriK_14579 [Actinomyces oris K20]
Length=76

 Score = 47.0 bits (110),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 32/76 (43%), Positives = 42/76 (56%), Gaps = 4/76 (5%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVGIVEVDGFPVFDVPP---D  57
           MRTTL+IDD VL  AR  A  +G S+G  +S+LA R +   G     G P+F  PP    
Sbjct  1   MRTTLEIDDRVLSLARERAHRDGVSLGRAVSDLALRGISHGGRTSRHGIPLF-FPPAGQQ  59

Query  58  APTVTSEDVVRALEDD  73
           A  VT E + +  +DD
Sbjct  60  AHVVTPELIEQYRDDD  75


>gi|113954589|ref|YP_729373.1| hypothetical protein sync_0136 [Synechococcus sp. CC9311]
 gi|113881940|gb|ABI46898.1| conserved hypothetical protein [Synechococcus sp. CC9311]
Length=81

 Score = 46.6 bits (109),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 26/41 (64%), Positives = 33/41 (81%), Gaps = 1/41 (2%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL-RP  40
           MRTTL++DDDVL  AR +AR   +SVG VIS+LAR++L RP
Sbjct  1   MRTTLRLDDDVLAAARVLARQRRRSVGDVISDLARQTLSRP  41


>gi|56478773|ref|YP_160362.1| hypothetical protein ebA5867 [Aromatoleum aromaticum EbN1]
 gi|56314816|emb|CAI09461.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length=81

 Score = 46.2 bits (108),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 23/38 (61%), Positives = 28/38 (74%), Gaps = 0/38 (0%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL  38
           MRTTL I+ DVL  A+ IAR +  SVG VIS+L RR+L
Sbjct  1   MRTTLDIESDVLAAAKEIARQQHTSVGKVISQLVRRTL  38


>gi|317967918|ref|ZP_07969308.1| hypothetical protein SCB02_00122 [Synechococcus sp. CB0205]
Length=86

 Score = 45.8 bits (107),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 22/38 (58%), Positives = 29/38 (77%), Gaps = 0/38 (0%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL  38
           MRTTL +DDDVL  A+ +AR   + +G+VISELAR+ L
Sbjct  8   MRTTLSLDDDVLAAAKVLARQRKQPIGSVISELARQGL  45


>gi|134291478|ref|YP_001115247.1| hypothetical protein Bcep1808_6070 [Burkholderia vietnamiensis 
G4]
 gi|134134667|gb|ABO58992.1| conserved hypothetical protein [Burkholderia vietnamiensis G4]
Length=85

 Score = 43.9 bits (102),  Expect = 0.008, Method: Compositional matrix adjust.
 Identities = 34/75 (46%), Positives = 42/75 (56%), Gaps = 4/75 (5%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLR--PVGIVEVDGFPVFDVPPDA  58
           MRTT+ IDDDVL  AR  A+  G S+G VIS+LAR +L+         +G P+  V   A
Sbjct  11  MRTTIDIDDDVLAFARERAK-PGTSIGKVISDLARAALQRGTTNQSSRNGLPLMPVSATA  69

Query  59  PTVTSEDVVRALEDD  73
             VT  D V  L DD
Sbjct  70  RPVT-LDTVNQLRDD  83


>gi|15610457|ref|NP_217838.1| hypothetical protein Rv3321c [Mycobacterium tuberculosis H37Rv]
 gi|15842913|ref|NP_337950.1| CopG family DNA-binding protein [Mycobacterium tuberculosis CDC1551]
 gi|31794502|ref|NP_856995.1| hypothetical protein Mb3350c [Mycobacterium bovis AF2122/97]
 77 more sequence titles
 Length=80

 Score = 43.1 bits (100),  Expect = 0.015, Method: Compositional matrix adjust.
 Identities = 29/78 (38%), Positives = 42/78 (54%), Gaps = 6/78 (7%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL-----RPVGIVEVDGFPVFDVP  55
           MRTTL IDDDVL   +  AR E ++ G ++S+LAR++L     +P    E D F  F+  
Sbjct  1   MRTTLSIDDDVLLAVKERARREKRTAGEILSDLARQALTNQNPQPAASQE-DAFHGFEPL  59

Query  56  PDAPTVTSEDVVRALEDD  73
           P      S  ++  L D+
Sbjct  60  PHRGGAVSNALIDRLRDE  77


>gi|114331351|ref|YP_747573.1| hypothetical protein Neut_1360 [Nitrosomonas eutropha C91]
 gi|114308365|gb|ABI59608.1| conserved hypothetical protein [Nitrosomonas eutropha C91]
Length=92

 Score = 42.7 bits (99),  Expect = 0.017, Method: Compositional matrix adjust.
 Identities = 30/81 (38%), Positives = 43/81 (54%), Gaps = 11/81 (13%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL--------RPVGIVEVDGFPVF  52
           +RTT+ I++DVL  A+ IAR+E  SVG VIS L R++L         P     V GF  F
Sbjct  12  VRTTIDIENDVLAAAKEIARTENVSVGKVISRLVRQALAGHVAEVSSPDDASSVTGFRPF  71

Query  53  DVPPDAPTVTSEDVVRALEDD  73
              P    + S +++  L D+
Sbjct  72  ---PSRGVIVSNELINRLRDE  89


>gi|336179655|ref|YP_004585030.1| hypothetical protein FsymDg_3832 [Frankia symbiont of Datisca 
glomerata]
 gi|334860635|gb|AEH11109.1| hypothetical protein, antitoxin [Frankia symbiont of Datisca 
glomerata]
Length=84

 Score = 42.4 bits (98),  Expect = 0.021, Method: Compositional matrix adjust.
 Identities = 30/78 (39%), Positives = 43/78 (56%), Gaps = 9/78 (11%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVGIVEVD-----GFPVFDVP  55
           MRTT+ + DD+   A SIAR   +++   +++L RR L   G  EV      G PV  + 
Sbjct  1   MRTTIDLSDDLHRQALSIARGTRRTLSDTVADLIRRGLGQSGAAEVSRSERTGLPVVRL-  59

Query  56  PDAPTVTSEDVVRALEDD  73
                +TSED VRA++DD
Sbjct  60  --GTVITSED-VRAMDDD  74


>gi|87123275|ref|ZP_01079126.1| hypothetical protein RS9917_05430 [Synechococcus sp. RS9917]
 gi|86168995|gb|EAQ70251.1| hypothetical protein RS9917_05430 [Synechococcus sp. RS9917]
Length=82

 Score = 41.2 bits (95),  Expect = 0.057, Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 28/38 (74%), Gaps = 0/38 (0%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL  38
           MRTTL IDDD+L+ A+ +A+ +  S G V+S L R++L
Sbjct  1   MRTTLDIDDDLLQAAKDLAKQQRMSAGQVVSTLLRQAL  38


>gi|334319153|ref|YP_004551712.1| hypothetical protein Sinme_6079 [Sinorhizobium meliloti AK83]
 gi|333814848|gb|AEG07516.1| hypothetical protein SinmeB_6397 [Sinorhizobium meliloti BL225C]
 gi|334099580|gb|AEG57589.1| hypothetical protein Sinme_6079 [Sinorhizobium meliloti AK83]
Length=47

 Score = 39.7 bits (91),  Expect = 0.17, Method: Compositional matrix adjust.
 Identities = 20/35 (58%), Positives = 26/35 (75%), Gaps = 0/35 (0%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELAR  35
           MRTTL I+DDV   AR++A  + + +G VISELAR
Sbjct  1   MRTTLSIEDDVRIAARAMATQQQQRIGEVISELAR  35


>gi|336035908|gb|AEH81839.1| hypothetical protein SM11_pC0766 [Sinorhizobium meliloti SM11]
Length=54

 Score = 39.3 bits (90),  Expect = 0.20, Method: Compositional matrix adjust.
 Identities = 20/35 (58%), Positives = 26/35 (75%), Gaps = 0/35 (0%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELAR  35
           MRTTL I+DDV   AR++A  + + +G VISELAR
Sbjct  8   MRTTLSIEDDVRIAARAMATQQQQRIGEVISELAR  42


>gi|330818819|ref|YP_004351036.1| hypothetical protein bgla_3p0110 [Burkholderia gladioli BSR3]
 gi|327374361|gb|AEA65713.1| hypothetical protein bgla_3p0110 [Burkholderia gladioli BSR3]
Length=73

 Score = 38.9 bits (89),  Expect = 0.28, Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 46/75 (62%), Gaps = 6/75 (8%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVGIVEV--DGFPVFDVPPDA  58
           MRTTL+IDDDVL  AR+ A  E  S+G +IS+LAR +L+P        +G PV    P A
Sbjct  1   MRTTLEIDDDVLALARARADREHVSIGRIISQLARAALQPAAAAPTTRNGLPVL---PSA  57

Query  59  PTVTSEDVVRALEDD  73
            TVT E +V  L D+
Sbjct  58  RTVTPE-LVNQLRDE  71


>gi|332321844|sp|P0CW33.1|VPB25_MYCTU RecName: Full=Antitoxin VapB25
Length=85

 Score = 37.7 bits (86),  Expect = 0.53, Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 26/38 (69%), Gaps = 0/38 (0%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL  38
           MRTT+ I D++L  A+  AR  G+S+GAVI +  RR L
Sbjct  1   MRTTVSISDELLATAKRRARERGQSLGAVIEDALRREL  38


>gi|121636191|ref|YP_976414.1| antitoxin [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224988664|ref|YP_002643351.1| hypothetical protein, antitoxin [Mycobacterium bovis BCG str. 
Tokyo 172]
 gi|121491838|emb|CAL70300.1| Conserved hypothetical protein, antitoxin [Mycobacterium bovis 
BCG str. Pasteur 1173P2]
 gi|224771777|dbj|BAH24583.1| hypothetical protein, antitoxin [Mycobacterium bovis BCG str. 
Tokyo 172]
 gi|341600207|emb|CCC62876.1| conserved hypothetical protein, antitoxin [Mycobacterium bovis 
BCG str. Moreau RDJ]
Length=85

 Score = 37.7 bits (86),  Expect = 0.57, Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 26/38 (69%), Gaps = 0/38 (0%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL  38
           MRTT+ I D++L  A+  AR  G+S+GAVI +  RR L
Sbjct  1   MRTTVSISDELLATAKRRARERGQSLGAVIEDALRREL  38


>gi|15840019|ref|NP_335056.1| hypothetical protein MT0645.2 [Mycobacterium tuberculosis CDC1551]
 gi|121636536|ref|YP_976759.1| antitoxin [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|167969042|ref|ZP_02551319.1| hypothetical protein MtubH3_13852 [Mycobacterium tuberculosis 
H37Ra]
 56 more sequence titles
 Length=75

 Score = 37.4 bits (85),  Expect = 0.77, Method: Compositional matrix adjust.
 Identities = 28/78 (36%), Positives = 43/78 (56%), Gaps = 9/78 (11%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL---RPVGIVE--VDGFPVFDVP  55
           MRTT+ +  D+ + A +IAR   +++   +++L RR L   RP  +      G P+  V 
Sbjct  1   MRTTIDLPQDLHKQALAIARDTHRTLSETVADLMRRGLAANRPTALSSDPRTGLPLVSV-  59

Query  56  PDAPTVTSEDVVRALEDD  73
                VTSED VR+LED+
Sbjct  60  --GTVVTSED-VRSLEDE  74


>gi|298529362|ref|ZP_07016765.1| conserved hypothetical protein [Desulfonatronospira thiodismutans 
ASO3-1]
 gi|298510798|gb|EFI34701.1| conserved hypothetical protein [Desulfonatronospira thiodismutans 
ASO3-1]
Length=81

 Score = 37.0 bits (84),  Expect = 0.99, Method: Compositional matrix adjust.
 Identities = 21/41 (52%), Positives = 25/41 (61%), Gaps = 0/41 (0%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPV  41
           MRTTL ID+DVLE AR++A         VI+E  R  LR V
Sbjct  1   MRTTLAIDNDVLEKARALAARRKIPFKTVINEALRAGLREV  41


>gi|15610008|ref|NP_217387.1| hypothetical protein Rv2871 [Mycobacterium tuberculosis H37Rv]
 gi|31794048|ref|NP_856541.1| hypothetical protein Mb2896 [Mycobacterium bovis AF2122/97]
 gi|121638753|ref|YP_978977.1| hypothetical protein BCG_2893 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 73 more sequence titles
 Length=85

 Score = 36.6 bits (83),  Expect = 1.3, Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 27/40 (68%), Gaps = 0/40 (0%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRP  40
           MRTT++IDD++  + ++ A   G++V AV+ +  RR L P
Sbjct  1   MRTTIRIDDELYREVKAKAARSGRTVAAVLEDAVRRGLNP  40


>gi|254551940|ref|ZP_05142387.1| antitoxin [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=85

 Score = 36.6 bits (83),  Expect = 1.3, Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 27/40 (68%), Gaps = 0/40 (0%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRP  40
           MRTT++IDD++  + ++ A   G++V AV+ +  RR L P
Sbjct  1   MRTTIRIDDELYREVKAKAARSGRTVAAVLEDAVRRGLNP  40


>gi|300780205|ref|ZP_07090061.1| toxin-antitoxin system [Corynebacterium genitalium ATCC 33030]
 gi|300534315|gb|EFK55374.1| toxin-antitoxin system [Corynebacterium genitalium ATCC 33030]
Length=80

 Score = 35.8 bits (81),  Expect = 2.0, Method: Compositional matrix adjust.
 Identities = 17/38 (45%), Positives = 27/38 (72%), Gaps = 0/38 (0%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL  38
           MR T+++D++V   AR+IA  +G SVG  +++LAR  L
Sbjct  1   MRLTIRLDEEVYTAARAIAAEKGTSVGEAVNDLARAGL  38


>gi|240169387|ref|ZP_04748046.1| hypothetical protein MkanA1_08743 [Mycobacterium kansasii ATCC 
12478]
Length=75

 Score = 35.4 bits (80),  Expect = 2.8, Method: Compositional matrix adjust.
 Identities = 28/78 (36%), Positives = 44/78 (57%), Gaps = 9/78 (11%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVGIVEVD-----GFPVFDVP  55
           MRTT+ + DD+ + A +IAR   +++   +++L RR L   G   +      G P+ +V 
Sbjct  1   MRTTIDLPDDLHKQALAIARDTRRTLSETVADLMRRGLGAGGAAAISTDPRTGLPLVNV-  59

Query  56  PDAPTVTSEDVVRALEDD  73
                VTSED VR+LED+
Sbjct  60  --GKVVTSED-VRSLEDE  74


>gi|311899907|dbj|BAJ32315.1| putative modular polyketide synthase [Kitasatospora setae KM-6054]
Length=1351

 Score = 34.7 bits (78),  Expect = 4.4, Method: Compositional matrix adjust.
 Identities = 18/35 (52%), Positives = 24/35 (69%), Gaps = 1/35 (2%)

Query  18    IARSEGKSVG-AVISELARRSLRPVGIVEVDGFPV  51
             + RS G  V  AV +EL RR +RP+G+V VD FP+
Sbjct  1198  LGRSLGGCVAHAVTAELERRGVRPLGLVLVDSFPM  1232


>gi|258593409|emb|CBE69748.1| conserved protein of unknown function [NC10 bacterium 'Dutch 
sediment']
Length=81

 Score = 34.7 bits (78),  Expect = 4.5, Method: Compositional matrix adjust.
 Identities = 16/38 (43%), Positives = 27/38 (72%), Gaps = 0/38 (0%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL  38
           M+TT+++ D +L DAR +A +EG ++ A++ E  RR L
Sbjct  1   MKTTIEVTDTLLRDARQLAANEGTTLRALVEEGLRRIL  38


>gi|86738905|ref|YP_479305.1| hypothetical protein Francci3_0184 [Frankia sp. CcI3]
 gi|86565767|gb|ABD09576.1| hypothetical protein Francci3_0184 [Frankia sp. CcI3]
Length=184

 Score = 34.3 bits (77),  Expect = 5.9, Method: Compositional matrix adjust.
 Identities = 24/64 (38%), Positives = 33/64 (52%), Gaps = 10/64 (15%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSL---RPVGIVEVDGFPVFD--VP  55
           MRTT+ + DD+   A SIAR   +++    ++L RR L   RP        +  FD  VP
Sbjct  1   MRTTIDLPDDLHRQAMSIARDTSRTLSETAADLMRRGLGQGRP-----THAYLPFDLTVP  55

Query  56  PDAP  59
           PD P
Sbjct  56  PDTP  59


>gi|336115787|ref|YP_004570553.1| hypothetical protein MLP_01360 [Microlunatus phosphovorus NM-1]
 gi|334683565|dbj|BAK33150.1| hypothetical protein MLP_01360 [Microlunatus phosphovorus NM-1]
Length=75

 Score = 34.3 bits (77),  Expect = 6.6, Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 39/75 (52%), Gaps = 4/75 (5%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVG--IVEVDGFPVFDVPPDA  58
           MRTTL +D  VL  AR+ A +E  S+G  +SELA   LR          GFPV    P  
Sbjct  1   MRTTLDLDPVVLSAARAKAAAERISLGKAVSELALSGLRAPSSQFTTASGFPVLSGVPGR  60

Query  59  PTVTSEDVVRALEDD  73
           P   ++++V A  DD
Sbjct  61  P--VTDELVAAHRDD  73


>gi|157382509|gb|ABV48745.1| Rv2871 [Mycobacterium kansasii ATCC 12478]
Length=85

 Score = 34.3 bits (77),  Expect = 6.8, Method: Compositional matrix adjust.
 Identities = 16/42 (39%), Positives = 27/42 (65%), Gaps = 0/42 (0%)

Query  1   MRTTLQIDDDVLEDARSIARSEGKSVGAVISELARRSLRPVG  42
           MRTT++IDD++  + ++ A   G++V AV+ +  R  L P G
Sbjct  1   MRTTIRIDDELYREVKARAARSGRTVAAVLEDAVRCGLNPPG  42



Lambda     K      H
   0.315    0.135    0.368 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 131500792262


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40