BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2530c

Length=139
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15609667|ref|NP_217046.1|  hypothetical protein Rv2530c [Mycob...   278    2e-73
gi|225874392|ref|YP_002755851.1|  Mycobacterium tuberculosis PIN ...   114    5e-24
gi|333815879|gb|AEG08546.1|  PIN domain protein family protein [S...   107    7e-22
gi|294339103|emb|CAZ87457.1|  conserved hypothetical protein; put...   105    2e-21
gi|15842022|ref|NP_337059.1|  hypothetical protein MT2569 [Mycoba...   105    2e-21
gi|87123102|ref|ZP_01078953.1|  hypothetical protein RS9917_04565...   105    2e-21
gi|15609631|ref|NP_217010.1|  hypothetical protein Rv2494 [Mycoba...   105    2e-21
gi|334319720|ref|YP_004556349.1|  PIN domain-containing protein f...   105    3e-21
gi|254232624|ref|ZP_04925951.1|  conserved hypothetical protein [...   104    4e-21
gi|289758626|ref|ZP_06518004.1|  conserved hypothetical protein [...   103    9e-21
gi|241518561|ref|YP_002979189.1|  PIN domain protein family prote...   103    9e-21
gi|113953974|ref|YP_729372.1|  hypothetical protein sync_0135 [Sy...   102    2e-20
gi|254420497|ref|ZP_05034221.1|  Mycobacterium tuberculosis PIN d...   102    3e-20
gi|262201135|ref|YP_003272343.1|  PIN domain-containing protein f...   101    3e-20
gi|116624591|ref|YP_826747.1|  PilT domain-containing protein [Ca...   101    4e-20
gi|134291479|ref|YP_001115248.1|  PilT domain-containing protein ...  97.4    6e-19
gi|206601848|gb|EDZ38331.1|  Hypothetical protein CGL2_11278040 [...  96.3    1e-18
gi|304413692|ref|ZP_07395136.1|  PIN domain-containing addiction ...  94.4    5e-18
gi|269954934|ref|YP_003324723.1|  PIN domain-containing protein f...  93.6    1e-17
gi|344199817|ref|YP_004784143.1|  PIN domain-containing protein f...  93.2    1e-17
gi|330818818|ref|YP_004351035.1|  PilT domain-containing protein ...  92.4    2e-17
gi|336115788|ref|YP_004570554.1|  hypothetical protein MLP_01370 ...  89.0    2e-16
gi|121595342|ref|YP_987238.1|  PilT domain-containing protein [Ac...  86.7    1e-15
gi|340628304|ref|YP_004746756.1|  hypothetical protein MCAN_33461...  85.9    2e-15
gi|15610456|ref|NP_217837.1|  hypothetical protein Rv3320c [Mycob...  85.1    3e-15
gi|326772971|ref|ZP_08232255.1|  toxin-antitoxin system, toxin co...  83.6    9e-15
gi|289747139|ref|ZP_06506517.1|  conserved hypothetical protein [...  83.6    1e-14
gi|24214369|ref|NP_711850.1|  hypothetical protein LA_1669 [Lepto...  83.2    1e-14
gi|336120816|ref|YP_004575602.1|  hypothetical protein MLP_51850 ...  82.8    2e-14
gi|45657964|ref|YP_002050.1|  hypothetical protein LIC12116 [Lept...  82.4    2e-14
gi|317967919|ref|ZP_07969309.1|  hypothetical protein SCB02_00127...  82.0    3e-14
gi|340358885|ref|ZP_08681388.1|  PIN family toxin-antitoxin syste...  80.1    1e-13
gi|114331350|ref|YP_747572.1|  PilT domain-containing protein [Ni...  79.3    2e-13
gi|240169388|ref|ZP_04748047.1|  hypothetical protein MkanA1_0874...  77.4    6e-13
gi|256826277|ref|YP_003150237.1|  nucleic acid-binding protein [K...  77.0    8e-13
gi|336179654|ref|YP_004585029.1|  PIN domain-containing protein f...  75.5    2e-12
gi|15607757|ref|NP_215131.1|  hypothetical protein Rv0617 [Mycoba...  72.8    2e-11
gi|87123276|ref|ZP_01079127.1|  hypothetical protein RS9917_05435...  69.3    2e-10
gi|324997204|ref|ZP_08118316.1|  toxin [Pseudonocardia sp. P1]        62.8    2e-08
gi|320109069|ref|YP_004184659.1|  PIN domain-containing protein f...  61.2    5e-08
gi|16264146|ref|NP_436938.1|  hypothetical protein SM_b20412 [Sin...  57.8    6e-07
gi|320108460|ref|YP_004184050.1|  PIN domain-containing protein f...  57.0    1e-06
gi|218459869|ref|ZP_03499960.1|  hypothetical protein RetlK5_1036...  54.3    6e-06
gi|16264145|ref|NP_436937.1|  hypothetical protein SM_b20411 [Sin...  53.9    7e-06
gi|124515583|gb|EAY57093.1|  conserved hypothetical protein [Lept...  52.8    2e-05
gi|190895067|ref|YP_001985360.1|  hypothetical protein RHECIAT_PC...  52.0    3e-05
gi|227876599|ref|ZP_03994709.1|  conserved hypothetical protein [...  48.1    4e-04
gi|33865109|ref|NP_896668.1|  hypothetical protein SYNW0573 [Syne...  45.1    0.003
gi|332797202|ref|YP_004458702.1|  VapC-type toxin [Acidianus hosp...  43.1    0.014
gi|254430307|ref|ZP_05044010.1|  hypothetical protein CPCC7001_19...  42.7    0.018


>gi|15609667|ref|NP_217046.1| hypothetical protein Rv2530c [Mycobacterium tuberculosis H37Rv]
 gi|15842064|ref|NP_337101.1| hypothetical protein MT2605 [Mycobacterium tuberculosis CDC1551]
 gi|31793711|ref|NP_856204.1| hypothetical protein Mb2559c [Mycobacterium bovis AF2122/97]
 81 more sequence titles
 Length=139

 Score =  278 bits (711),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 138/139 (99%), Positives = 139/139 (100%), Gaps = 0/139 (0%)

Query  1    VTALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVST  60
            +TALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVST
Sbjct  1    MTALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVST  60

Query  61   TPAIAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRL  120
            TPAIAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRL
Sbjct  61   TPAIAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRL  120

Query  121  VTFDAALADSASAGLVEVL  139
            VTFDAALADSASAGLVEVL
Sbjct  121  VTFDAALADSASAGLVEVL  139


>gi|225874392|ref|YP_002755851.1| Mycobacterium tuberculosis PIN domain protein [Acidobacterium 
capsulatum ATCC 51196]
 gi|225792658|gb|ACO32748.1| Mycobacterium tuberculosis PIN domain protein [Acidobacterium 
capsulatum ATCC 51196]
Length=146

 Score =  114 bits (285),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 56/125 (45%), Positives = 78/125 (63%), Gaps = 0/125 (0%)

Query  4    LLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVSTTPA  63
            LLDVNVL+A+ WP+HVHH  AQ+WF++ S +GWAT P+T+ G+VRI SN +  + + T  
Sbjct  5    LLDVNVLVAMFWPSHVHHVRAQQWFSEHSRHGWATCPLTQTGFVRIVSNPAFSKSAVTAR  64

Query  64   IAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRLVTF  123
             AI  L        H FW D V +   ++   D +  H++VTD +LI LA  + GRL+TF
Sbjct  65   DAIHVLQENLKHRSHVFWADSVGVNEAASFTHDRLIGHKQVTDAYLIGLAHHHQGRLLTF  124

Query  124  DAALA  128
            D  L 
Sbjct  125  DRGLG  129


>gi|333815879|gb|AEG08546.1| PIN domain protein family protein [Sinorhizobium meliloti BL225C]
Length=147

 Score =  107 bits (266),  Expect = 7e-22, Method: Compositional matrix adjust.
 Identities = 58/131 (45%), Positives = 74/131 (57%), Gaps = 0/131 (0%)

Query  1    VTALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVST  60
            +T LLDVNVLIAL  P+H+ H  A  WF       WAT PITE G +RI  N        
Sbjct  1    MTFLLDVNVLIALIDPSHIGHDDAHEWFASIGQTAWATCPITENGVIRIVGNPEYPNSPG  60

Query  61   TPAIAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRL  120
            +P  A+  +A + SL GH FWPDDV L+  S      +    +VTD +L+ALA   GG+L
Sbjct  61   SPLPAMEIVAKLRSLPGHVFWPDDVSLVGSSDIIPSKILTSGQVTDTYLLALAKARGGKL  120

Query  121  VTFDAALADSA  131
             TFD  L+ +A
Sbjct  121  ATFDRKLSAAA  131


>gi|294339103|emb|CAZ87457.1| conserved hypothetical protein; putative PIN domain [Thiomonas 
sp. 3As]
Length=143

 Score =  105 bits (263),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 59/134 (45%), Positives = 77/134 (58%), Gaps = 1/134 (0%)

Query  2    TALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVSTT  61
            T LLDVNVLIAL  P HV H AA  WF +  S  WAT P+TE G +RI  +        T
Sbjct  3    TFLLDVNVLIALIDPAHVQHDAAHHWFAETGSASWATCPLTENGLLRIVGHPRYPNTPGT  62

Query  62   PAIAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRLV  121
            PA     L A+ +L GH FWPDD+ L+       D + +H ++TD +L+ALA  + G+L 
Sbjct  63   PATVAVVLQALRALPGHHFWPDDISLLNPELILTDRLLSHTQITDSYLLALARHHSGKLA  122

Query  122  TFDAAL-ADSASAG  134
            +FD  L AD+   G
Sbjct  123  SFDRKLVADAVVDG  136


>gi|15842022|ref|NP_337059.1| hypothetical protein MT2569 [Mycobacterium tuberculosis CDC1551]
 gi|254366798|ref|ZP_04982840.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|13882299|gb|AAK46873.1| hypothetical protein MT2569 [Mycobacterium tuberculosis CDC1551]
 gi|134152308|gb|EBA44353.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|323718902|gb|EGB28056.1| toxin protein [Mycobacterium tuberculosis CDC1551A]
Length=141

 Score =  105 bits (262),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 68/147 (47%), Positives = 87/147 (60%), Gaps = 20/147 (13%)

Query  3    ALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVSTTP  62
            ALLDVN L+AL W +H+HHA  + WFT  ++ GWAT P+TEAG+VR+S+N  V+  +   
Sbjct  2    ALLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGI  61

Query  63   AIAIAQLAAMTSLAGHTFWP-------DDVPLIVGSAGDRDAVSNHRRVTDCHLIALAAR  115
            A A   L A+ ++ GH F         DDVPLIVG          +R+VTD HL+ LA R
Sbjct  62   ADARPVLVALRAVGGHRFLADDVSLVDDDVPLIVG----------YRQVTDAHLLTLARR  111

Query  116  YGGRLVTFDAA---LADSASAGLVEVL  139
             G RLVTFDA    LA       VE+L
Sbjct  112  RGVRLVTFDAGVFTLAQQRPKTPVELL  138


>gi|87123102|ref|ZP_01078953.1| hypothetical protein RS9917_04565 [Synechococcus sp. RS9917]
 gi|86168822|gb|EAQ70078.1| hypothetical protein RS9917_04565 [Synechococcus sp. RS9917]
Length=149

 Score =  105 bits (262),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 58/132 (44%), Positives = 74/132 (57%), Gaps = 0/132 (0%)

Query  3    ALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVSTTP  62
            ALLDVNVLIAL  P HVHH  A RWF   +S GWAT P+T+   +RI SN         P
Sbjct  6    ALLDVNVLIALLDPQHVHHEPAHRWFQANASYGWATCPLTQNALLRILSNPRYPNSPGGP  65

Query  63   AIAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRLVT  122
            A  +  L  M S  GH FWPD +          + + +H ++TD +L+ALA   GG L++
Sbjct  66   ASVMPLLQGMLSHPGHLFWPDLLSWSTDGELQAELLLHHGQITDTYLLALAVHQGGCLMS  125

Query  123  FDAALADSASAG  134
            FDA L+  A  G
Sbjct  126  FDARLSTCAVPG  137


>gi|15609631|ref|NP_217010.1| hypothetical protein Rv2494 [Mycobacterium tuberculosis H37Rv]
 gi|31793674|ref|NP_856167.1| hypothetical protein Mb2522 [Mycobacterium bovis AF2122/97]
 gi|121638376|ref|YP_978600.1| hypothetical protein BCG_2514 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 68 more sequence titles
 Length=141

 Score =  105 bits (262),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 68/147 (47%), Positives = 87/147 (60%), Gaps = 20/147 (13%)

Query  3    ALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVSTTP  62
            ALLDVN L+AL W +H+HHA  + WFT  ++ GWAT P+TEAG+VR+S+N  V+  +   
Sbjct  2    ALLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGI  61

Query  63   AIAIAQLAAMTSLAGHTFWP-------DDVPLIVGSAGDRDAVSNHRRVTDCHLIALAAR  115
            A A   L A+ ++ GH F         DDVPLIVG          +R+VTD HL+ LA R
Sbjct  62   ADARRVLVALRAVGGHRFLADDVSLVDDDVPLIVG----------YRQVTDAHLLTLARR  111

Query  116  YGGRLVTFDAA---LADSASAGLVEVL  139
             G RLVTFDA    LA       VE+L
Sbjct  112  RGVRLVTFDAGVFTLAQQRPKTPVELL  138


>gi|334319720|ref|YP_004556349.1| PIN domain-containing protein family protein [Sinorhizobium meliloti 
AK83]
 gi|334097459|gb|AEG55469.1| PIN domain protein family protein [Sinorhizobium meliloti AK83]
Length=147

 Score =  105 bits (261),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 57/131 (44%), Positives = 73/131 (56%), Gaps = 0/131 (0%)

Query  1    VTALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVST  60
            +T LLDVNVLIAL  P+H+ H  A  WF       WAT PITE G +RI  N        
Sbjct  1    MTFLLDVNVLIALIDPSHIGHDDAHEWFASIGQTTWATCPITENGVIRIVGNPEYPNSPG  60

Query  61   TPAIAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRL  120
            +P   +  +A + SL GH FWPDDV L+  S      +    +VTD +L+ALA   GG+L
Sbjct  61   SPLPVMEIVAKLRSLPGHVFWPDDVSLVGSSDIIPSKILTSGQVTDTYLLALAKARGGKL  120

Query  121  VTFDAALADSA  131
             TFD  L+ +A
Sbjct  121  ATFDRKLSAAA  131


>gi|254232624|ref|ZP_04925951.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|124601683|gb|EAY60693.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
Length=141

 Score =  104 bits (259),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 67/147 (46%), Positives = 87/147 (60%), Gaps = 20/147 (13%)

Query  3    ALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVSTTP  62
            AL+DVN L+AL W +H+HHA  + WFT  ++ GWAT P+TEAG+VR+S+N  V+  +   
Sbjct  2    ALIDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRVSTNPKVLPSAIGI  61

Query  63   AIAIAQLAAMTSLAGHTFWP-------DDVPLIVGSAGDRDAVSNHRRVTDCHLIALAAR  115
            A A   L A+ ++ GH F         DDVPLIVG          +R+VTD HL+ LA R
Sbjct  62   ADARPVLVALRAVGGHRFLADDVSLVDDDVPLIVG----------YRQVTDAHLLTLARR  111

Query  116  YGGRLVTFDAA---LADSASAGLVEVL  139
             G RLVTFDA    LA       VE+L
Sbjct  112  RGVRLVTFDAGVFTLAQQRPKTPVELL  138


>gi|289758626|ref|ZP_06518004.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|294994398|ref|ZP_06800089.1| toxin [Mycobacterium tuberculosis 210]
 gi|289714190|gb|EFD78202.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|326904108|gb|EGE51041.1| toxin [Mycobacterium tuberculosis W-148]
 gi|339295377|gb|AEJ47488.1| hypothetical protein CCDC5079_2298 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339298997|gb|AEJ51107.1| hypothetical protein CCDC5180_2270 [Mycobacterium tuberculosis 
CCDC5180]
Length=141

 Score =  103 bits (257),  Expect = 9e-21, Method: Compositional matrix adjust.
 Identities = 68/147 (47%), Positives = 86/147 (59%), Gaps = 20/147 (13%)

Query  3    ALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVSTTP  62
            ALLDVN L+AL W +H+HHA  + WFT  ++ GWAT P+TEAG+VR S+N  V+  +   
Sbjct  2    ALLDVNALVALAWDSHIHHARIREWFTANATLGWATCPLTEAGFVRASTNPKVLPSAIGI  61

Query  63   AIAIAQLAAMTSLAGHTFWP-------DDVPLIVGSAGDRDAVSNHRRVTDCHLIALAAR  115
            A A   L A+ ++ GH F         DDVPLIVG          +R+VTD HL+ LA R
Sbjct  62   ADARRVLVALRAVGGHRFLADDVSLVDDDVPLIVG----------YRQVTDAHLLTLARR  111

Query  116  YGGRLVTFDAA---LADSASAGLVEVL  139
             G RLVTFDA    LA       VE+L
Sbjct  112  RGVRLVTFDAGVFTLAQQRPKTPVELL  138


>gi|241518561|ref|YP_002979189.1| PIN domain protein family protein [Rhizobium leguminosarum bv. 
trifolii WSM1325]
 gi|240862974|gb|ACS60638.1| PIN domain protein family protein [Rhizobium leguminosarum bv. 
trifolii WSM1325]
Length=147

 Score =  103 bits (257),  Expect = 9e-21, Method: Compositional matrix adjust.
 Identities = 56/131 (43%), Positives = 74/131 (57%), Gaps = 0/131 (0%)

Query  1    VTALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVST  60
            +T LLDVNVLIAL  P HV H  A  WF     + WAT PITE G +RI  N        
Sbjct  1    MTFLLDVNVLIALIDPGHVAHDDAHEWFAAIGQSAWATCPITENGVIRIVGNPQYPNSPG  60

Query  61   TPAIAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRL  120
            +P++ +  +  + SL GH+FWPDDV L+         +    +VTD +L+ALA   GG+L
Sbjct  61   SPSLVMEIVRKLRSLPGHSFWPDDVSLVGSGDIAPAKILTSGQVTDTYLLALAKARGGQL  120

Query  121  VTFDAALADSA  131
             TFD  L+ +A
Sbjct  121  ATFDRKLSAAA  131


>gi|113953974|ref|YP_729372.1| hypothetical protein sync_0135 [Synechococcus sp. CC9311]
 gi|113881325|gb|ABI46283.1| Mycobacterium tuberculosis PIN domain family subfamily [Synechococcus 
sp. CC9311]
Length=148

 Score =  102 bits (254),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 54/137 (40%), Positives = 76/137 (56%), Gaps = 0/137 (0%)

Query  3    ALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVSTTP  62
            ALLDVNVLIAL  P HVHH  + RWF     +GWAT P+T+   +RI  N         P
Sbjct  6    ALLDVNVLIALIDPQHVHHEPSHRWFQAHGGDGWATCPLTQNALLRILGNPRYPNSPGGP  65

Query  63   AIAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRLVT  122
            A+ ++ L  + +   H FWPD +        + +A+ +H ++TD +L+ LA  + GRLV+
Sbjct  66   AVVMSFLQELLAHPAHVFWPDALSWQATGVFEAEALLHHGQITDTYLLGLAVHHQGRLVS  125

Query  123  FDAALADSASAGLVEVL  139
            FD  L+  A  G  E L
Sbjct  126  FDRRLSLRAVRGGEEAL  142


>gi|254420497|ref|ZP_05034221.1| Mycobacterium tuberculosis PIN domain family [Brevundimonas sp. 
BAL3]
 gi|196186674|gb|EDX81650.1| Mycobacterium tuberculosis PIN domain family [Brevundimonas sp. 
BAL3]
Length=145

 Score =  102 bits (253),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 56/131 (43%), Positives = 72/131 (55%), Gaps = 0/131 (0%)

Query  1    VTALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVST  60
            +T LLDVNVLIAL  P HV H  A  WF + ++  WAT PITE G VRI  N        
Sbjct  1    MTYLLDVNVLIALVDPRHVFHDTANGWFQREAAGSWATCPITENGLVRIVGNSRYRNPVG  60

Query  61   TPAIAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRL  120
             P+  +  L  +  +AGH FWPD + L      D  A++   ++TD +L+ALA   GGRL
Sbjct  61   PPSEIVRILELLRDMAGHVFWPDAISLADDRLFDPSALTTPEQITDAYLLALAVSNGGRL  120

Query  121  VTFDAALADSA  131
             T D  L+  A
Sbjct  121  ATLDRRLSPDA  131


>gi|262201135|ref|YP_003272343.1| PIN domain-containing protein family protein [Gordonia bronchialis 
DSM 43247]
 gi|262084482|gb|ACY20450.1| PIN domain protein family protein [Gordonia bronchialis DSM 43247]
Length=144

 Score =  101 bits (252),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 58/127 (46%), Positives = 74/127 (59%), Gaps = 3/127 (2%)

Query  4    LLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVSTTPA  63
            LLD+NVL+AL W  HVHH  A   F Q +   W+T P+TEAG VR+    S +    T A
Sbjct  7    LLDINVLVALSWDQHVHHGVAHERFAQLTE--WSTCPVTEAGLVRVLMTESAVGRVVTGA  64

Query  64   IAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRLVTF  123
             A+ QLAA+ ++ G  F  DD  L   S  D   +   R+VTD HL+ LAAR G +L TF
Sbjct  65   EALGQLAALRTVTGWGFLHDDASL-ADSVIDLRVLMGRRQVTDLHLVNLAARNGRKLATF  123

Query  124  DAALADS  130
            DA L +S
Sbjct  124  DAGLRES  130


>gi|116624591|ref|YP_826747.1| PilT domain-containing protein [Candidatus Solibacter usitatus 
Ellin6076]
 gi|116227753|gb|ABJ86462.1| PIN domain family protein [Candidatus Solibacter usitatus Ellin6076]
Length=147

 Score =  101 bits (252),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 56/132 (43%), Positives = 74/132 (57%), Gaps = 0/132 (0%)

Query  3    ALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVSTTP  62
            ALLDVNVLIAL  P H+ H  A RWF      GWAT PIT  G VRI S+     ++ +P
Sbjct  4    ALLDVNVLIALFDPAHIDHVEAHRWFGLNRKRGWATCPITINGCVRILSSPGYPGINASP  63

Query  63   AIAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRLVT  122
            A   A++ A  +   H FWPD V L+  +      ++ H+ +TD +L+ LA R  GRL T
Sbjct  64   AEITARMQASFANVDHHFWPDSVSLLDEALFRPSMITGHKNITDVYLLGLAVRNHGRLAT  123

Query  123  FDAALADSASAG  134
            FD ++   A  G
Sbjct  124  FDQSIPLKAVHG  135


>gi|134291479|ref|YP_001115248.1| PilT domain-containing protein [Burkholderia vietnamiensis G4]
 gi|134134668|gb|ABO58993.1| PIN domain family protein [Burkholderia vietnamiensis G4]
Length=144

 Score = 97.4 bits (241),  Expect = 6e-19, Method: Compositional matrix adjust.
 Identities = 54/127 (43%), Positives = 71/127 (56%), Gaps = 0/127 (0%)

Query  1    VTALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVST  60
            +T LLDVNVLIAL  P HV H  A  WF +   + WAT P+TE G +RI  N        
Sbjct  2    ITYLLDVNVLIALLDPAHVQHEPAHAWFGRVGHSAWATCPLTENGVLRIIGNPKYPNTMV  61

Query  61   TPAIAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRL  120
            +PA     +  + S AGHTFW DDV L+     D   + +  ++TD +L+ALA  + G+L
Sbjct  62   SPASVAPLVVQLRSHAGHTFWSDDVSLLDEKHVDATRLLSSAQLTDTYLLALARAHKGKL  121

Query  121  VTFDAAL  127
             TFD  L
Sbjct  122  ATFDRRL  128


>gi|206601848|gb|EDZ38331.1| Hypothetical protein CGL2_11278040 [Leptospirillum sp. Group 
II '5-way CG']
Length=142

 Score = 96.3 bits (238),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 51/135 (38%), Positives = 79/135 (59%), Gaps = 1/135 (0%)

Query  1    VTALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVST  60
            + +LLD+NVLIAL   +HV H  A+ WF+  +++GWA+ P+T+ G +RI S+ +     +
Sbjct  1    MRSLLDINVLIALLDSDHVSHHTAREWFSLHATDGWASCPLTQNGCMRIMSHPNYPNPIS  60

Query  61   TPAIAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRL  120
               I   +L+   S + H FWPDDV  +     D   +    ++TD +L+ALA R+ GR 
Sbjct  61   ISRIR-ERLSEAASSSLHQFWPDDVSFLDAGVADTARIHGPHQITDLYLLALAIRHKGRF  119

Query  121  VTFDAALADSASAGL  135
            VTFD ++  SA  G 
Sbjct  120  VTFDGSIVTSAVQGF  134


>gi|304413692|ref|ZP_07395136.1| PIN domain-containing addiction module [Candidatus Regiella insecticola 
LSR1]
 gi|304283783|gb|EFL92177.1| PIN domain-containing addiction module [Candidatus Regiella insecticola 
LSR1]
Length=147

 Score = 94.4 bits (233),  Expect = 5e-18, Method: Compositional matrix adjust.
 Identities = 52/128 (41%), Positives = 69/128 (54%), Gaps = 1/128 (0%)

Query  4    LLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVSTTPA  63
            LLDVNVLIAL  P H+ H AA  WF +     WAT P+T+ G +RI  +        TPA
Sbjct  4    LLDVNVLIALVDPAHIQHDAAHTWFEK-QGQDWATCPLTQNGVLRIVGHGRYPNSPGTPA  62

Query  64   IAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRLVTF  123
                 +  + SL GH FWPDD+ L+     D   +    ++TD +L+ALA  + G+L TF
Sbjct  63   AVAELMTTLCSLPGHCFWPDDISLLDTEKLDATRLLTSAQLTDSYLLALACAHNGQLATF  122

Query  124  DAALADSA  131
            D  L   A
Sbjct  123  DRRLETDA  130


>gi|269954934|ref|YP_003324723.1| PIN domain-containing protein family protein [Xylanimonas cellulosilytica 
DSM 15894]
 gi|269303615|gb|ACZ29165.1| PIN domain protein family protein [Xylanimonas cellulosilytica 
DSM 15894]
Length=141

 Score = 93.6 bits (231),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 57/130 (44%), Positives = 74/130 (57%), Gaps = 9/130 (6%)

Query  2    TALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVSTT  61
            T L DVNVLIAL + +HVHH  A  W  +     +ATT +TEAG+VR+S N +++     
Sbjct  3    TDLPDVNVLIALHFEDHVHHVPAMSWLRK--GGQFATTALTEAGFVRVSMNPAIV---GE  57

Query  62   PAIAIAQLAAMTSLAGH---TFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGG  118
            P   +  L A+  L GH   TFW DD  L      DR  +S H++ TD HL+ LAA   G
Sbjct  58   PFSGVEALEALRRLRGHTRATFWADDTSLATSPFADR-VLSGHKQTTDLHLLNLAASRDG  116

Query  119  RLVTFDAALA  128
             LVTFD+ L 
Sbjct  117  VLVTFDSKLG  126


>gi|344199817|ref|YP_004784143.1| PIN domain-containing protein family protein [Acidithiobacillus 
ferrivorans SS3]
 gi|343775261|gb|AEM47817.1| PIN domain protein family protein [Acidithiobacillus ferrivorans 
SS3]
Length=142

 Score = 93.2 bits (230),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 52/131 (40%), Positives = 69/131 (53%), Gaps = 0/131 (0%)

Query  1    VTALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVST  60
            +T LLDVNVLIAL  P HV H  A  WF       WAT P+TE G +RI  +        
Sbjct  1    MTFLLDVNVLIALIDPMHVQHDMAHEWFAAHGQPAWATCPLTENGVLRIVGHPRYPNSPG  60

Query  61   TPAIAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRL  120
            TPA     +  + +  GH FWPDD+ L+     D   +    ++TD +L+ALA  + G+L
Sbjct  61   TPAAVAPLIQGLRASPGHVFWPDDISLLDVDHIDASRLLTSGQITDSYLLALACAHEGQL  120

Query  121  VTFDAALADSA  131
             TFD  L  +A
Sbjct  121  ATFDHRLVTNA  131


>gi|330818818|ref|YP_004351035.1| PilT domain-containing protein [Burkholderia gladioli BSR3]
 gi|327374360|gb|AEA65712.1| PilT domain-containing protein [Burkholderia gladioli BSR3]
Length=151

 Score = 92.4 bits (228),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 54/127 (43%), Positives = 69/127 (55%), Gaps = 0/127 (0%)

Query  1    VTALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVST  60
            +T LLDVNVLIAL    HV H AA  WF   +   WAT P+TE G +RI  N        
Sbjct  9    MTYLLDVNVLIALLDAGHVQHEAAHEWFGSAAHAAWATCPLTENGVLRIIGNPRYPNTLG  68

Query  61   TPAIAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRL  120
            TPA     +  + +  GHTFW DD+ L+     D   +    +VTD +L+ALA  +GG+L
Sbjct  69   TPAAVAPLVTQLRAHPGHTFWWDDLSLLNPEQVDVSRILATDQVTDTYLLALARVHGGKL  128

Query  121  VTFDAAL  127
             TFD  L
Sbjct  129  ATFDRRL  135


>gi|336115788|ref|YP_004570554.1| hypothetical protein MLP_01370 [Microlunatus phosphovorus NM-1]
 gi|334683566|dbj|BAK33151.1| hypothetical protein MLP_01370 [Microlunatus phosphovorus NM-1]
Length=139

 Score = 89.0 bits (219),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 54/127 (43%), Positives = 68/127 (54%), Gaps = 3/127 (2%)

Query  4    LLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVSTTPA  63
            LLDVNVL+AL W  HVHH  A + F +  +  W T P TEAG VR+     V+      +
Sbjct  2    LLDVNVLLALSWDQHVHHEIAHQRFAELDT--WNTCPTTEAGLVRLLLTEQVVGRKVIGS  59

Query  64   IAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRLVTF  123
             A+ QLAAM  ++G  F PD   L      D   +   R+VTD  L+ LAA    +L TF
Sbjct  60   EALGQLAAMRGVSGWGFLPDSGSL-AEPVIDTRVLMGRRQVTDLQLVNLAASNNTKLATF  118

Query  124  DAALADS  130
            DA L DS
Sbjct  119  DAGLRDS  125


>gi|121595342|ref|YP_987238.1| PilT domain-containing protein [Acidovorax sp. JS42]
 gi|120607422|gb|ABM43162.1| PIN domain family protein [Acidovorax sp. JS42]
Length=142

 Score = 86.7 bits (213),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 53/135 (40%), Positives = 75/135 (56%), Gaps = 3/135 (2%)

Query  1    VTALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVST  60
            + ALLDVNVLIAL    H+HH  A +W  Q   +GWA+ P+T+ G +RI +  +  Q   
Sbjct  1    MRALLDVNVLIALLDAAHIHHQRASQWLEQSLHHGWASCPLTQNGCLRIMAQPAYPQ--A  58

Query  61   TPAIAIAQ-LAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGR  119
             P  A+AQ L    +   H F  DD  L+   +     +  HR+VTD +L+ LA R+G R
Sbjct  59   LPLAAVAQRLGQAAATPAHLFIADDYSLLDADSLHWPQLLGHRQVTDAYLLGLAVRHGCR  118

Query  120  LVTFDAALADSASAG  134
             V+FDA +  +A  G
Sbjct  119  FVSFDARVNLAAVPG  133


>gi|340628304|ref|YP_004746756.1| hypothetical protein MCAN_33461 [Mycobacterium canettii CIPT 
140010059]
 gi|340006494|emb|CCC45677.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=142

 Score = 85.9 bits (211),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 56/133 (43%), Positives = 75/133 (57%), Gaps = 3/133 (2%)

Query  3    ALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVR-ISSNRSVMQVSTT  61
            ALLDVNVL+AL   +HV H  A+ W T     GWA+  IT+ G+VR IS  R    +S  
Sbjct  3    ALLDVNVLLALLDRDHVDHERARAWITGQIERGWASCAITQNGFVRVISQPRYPSPISVA  62

Query  62   PAIAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRLV  121
             AI +  LA  T    H FW   V ++     DR  + + ++VTD +L+ALA  + GR V
Sbjct  63   HAIDL--LARATHTRYHEFWSCTVSILDSKVIDRSRLHSPKQVTDAYLLALAVAHDGRFV  120

Query  122  TFDAALADSASAG  134
            TFD A+A +A  G
Sbjct  121  TFDQAIALTAVPG  133


>gi|15610456|ref|NP_217837.1| hypothetical protein Rv3320c [Mycobacterium tuberculosis H37Rv]
 gi|15842912|ref|NP_337949.1| hypothetical protein MT3421 [Mycobacterium tuberculosis CDC1551]
 gi|31794501|ref|NP_856994.1| hypothetical protein Mb3349c [Mycobacterium bovis AF2122/97]
 77 more sequence titles
 Length=142

 Score = 85.1 bits (209),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 55/133 (42%), Positives = 75/133 (57%), Gaps = 3/133 (2%)

Query  3    ALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVR-ISSNRSVMQVSTT  61
            ALLDVNVL+AL   +HV H  A+ W T     GWA+  IT+ G+VR IS  R    +S  
Sbjct  3    ALLDVNVLLALLDRDHVDHERARAWITGQIERGWASCAITQNGFVRVISQPRYPSPISVA  62

Query  62   PAIAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRLV  121
             AI +  LA  T    H FW   V ++     DR  + + ++VTD +L+ALA  + GR V
Sbjct  63   HAIDL--LARATHTRYHEFWSCTVSILDSKVIDRSRLHSPKQVTDAYLLALAVAHDGRFV  120

Query  122  TFDAALADSASAG  134
            TFD ++A +A  G
Sbjct  121  TFDQSIALTAVPG  133


>gi|326772971|ref|ZP_08232255.1| toxin-antitoxin system, toxin component, PIN family [Actinomyces 
viscosus C505]
 gi|326637603|gb|EGE38505.1| toxin-antitoxin system, toxin component, PIN family [Actinomyces 
viscosus C505]
Length=146

 Score = 83.6 bits (205),  Expect = 9e-15, Method: Compositional matrix adjust.
 Identities = 50/125 (40%), Positives = 64/125 (52%), Gaps = 3/125 (2%)

Query  4    LLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVSTTPA  63
            LLDVNVL+AL  PNH HH     WF     + WAT  IT+A Y+R+  N  V       A
Sbjct  9    LLDVNVLVALSLPNHAHHEVVSAWFD--GVDQWATCSITQAAYLRLLMNPRVTGFEIAAA  66

Query  64   IAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRLVTF  123
              ++ L  +TSL  H F  DD P    S      +   ++VTD HL+ LAAR+   L T 
Sbjct  67   DVLSGLGGLTSLDDHVFLVDDAPPAEPSIS-FSRLKGPKQVTDLHLVDLAARHNAVLATM  125

Query  124  DAALA  128
            D  +A
Sbjct  126  DGRMA  130


>gi|289747139|ref|ZP_06506517.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289687667|gb|EFD55155.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
Length=202

 Score = 83.6 bits (205),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 53/129 (42%), Positives = 73/129 (57%), Gaps = 3/129 (2%)

Query  1    VTALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVR-ISSNRSVMQVS  59
            + ALLDVNVL+AL   +HV H  A+ W T     GWA+  IT+ G+VR IS  R    +S
Sbjct  1    MRALLDVNVLLALLDRDHVDHERARAWITGQIERGWASCAITQNGFVRVISQPRYPSPIS  60

Query  60   TTPAIAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGR  119
               AI +  LA  T    H FW   V ++     DR  + + ++VTD +L+ALA  + GR
Sbjct  61   VAHAIDL--LARATHTRYHEFWSCTVSILDSKVIDRSRLHSPKQVTDAYLLALAVAHDGR  118

Query  120  LVTFDAALA  128
             VTFD ++A
Sbjct  119  FVTFDQSIA  127


>gi|24214369|ref|NP_711850.1| hypothetical protein LA_1669 [Leptospira interrogans serovar 
Lai str. 56601]
 gi|24195304|gb|AAN48868.1| hypothetical protein LA_1669 [Leptospira interrogans serovar 
Lai str. 56601]
Length=144

 Score = 83.2 bits (204),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 51/133 (39%), Positives = 75/133 (57%), Gaps = 3/133 (2%)

Query  4    LLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVSTTPA  63
            LLDVNVLI+L   NHV H  A +WF + + NGWAT PIT+   VRI S+ S         
Sbjct  4    LLDVNVLISLCDSNHVFHEKAWKWFDRKAKNGWATCPITQNALVRIMSHSSYPGNPGGVE  63

Query  64   IAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVS-NHRRVTDCHLIALAARYGGRLVT  122
            +  A L ++  + GH F PD++  I  S    + VS + +++TD +L+AL+  +  +  T
Sbjct  64   VVSAILHSLLKVKGHQFIPDNIS-INSSLFYLNIVSVSSKQITDVYLLALSVHHKVKFAT  122

Query  123  FDAALA-DSASAG  134
            FD+ +  DS   G
Sbjct  123  FDSKIPYDSVDRG  135


>gi|336120816|ref|YP_004575602.1| hypothetical protein MLP_51850 [Microlunatus phosphovorus NM-1]
 gi|334688614|dbj|BAK38199.1| hypothetical protein MLP_51850 [Microlunatus phosphovorus NM-1]
Length=148

 Score = 82.8 bits (203),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 53/125 (43%), Positives = 75/125 (60%), Gaps = 3/125 (2%)

Query  4    LLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVSTTPA  63
            L DVN+L+AL  P HVHH  AQ WFT  S   +ATTPITE+G++R++ N +V    T+  
Sbjct  13   LPDVNLLVALLHPAHVHHLQAQAWFT--SVERFATTPITESGFIRMALNPAVAGQVTSLD  70

Query  64   IAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRLVTF  123
             A++ L ++ +     +  DD  L + +  D   +   R+VTD HL+ LAA +  RLVTF
Sbjct  71   DAMSSLNSVRADKRVEYVADDTSLALPTI-DLVGLVGFRQVTDFHLVNLAACHSARLVTF  129

Query  124  DAALA  128
            D  LA
Sbjct  130  DRKLA  134


>gi|45657964|ref|YP_002050.1| hypothetical protein LIC12116 [Leptospira interrogans serovar 
Copenhageni str. Fiocruz L1-130]
 gi|45601205|gb|AAS70687.1| conserved hypothetical protein [Leptospira interrogans serovar 
Copenhageni str. Fiocruz L1-130]
Length=144

 Score = 82.4 bits (202),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 51/133 (39%), Positives = 75/133 (57%), Gaps = 3/133 (2%)

Query  4    LLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVSTTPA  63
            LLDVNVLI+L   NHV H  A +WF + + NGWAT PIT+   VRI S+ S         
Sbjct  4    LLDVNVLISLCDSNHVFHEKAWKWFDRKARNGWATCPITQNALVRIMSHSSYPGNPGGVE  63

Query  64   IAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVS-NHRRVTDCHLIALAARYGGRLVT  122
            +  A L ++  + GH F PD++  I  S    + VS + +++TD +L+AL+  +  +  T
Sbjct  64   VVSAILHSLLKVKGHQFIPDNIS-INSSLFYLNIVSVSSKQITDVYLLALSVHHKVKFAT  122

Query  123  FDAALA-DSASAG  134
            FD+ +  DS   G
Sbjct  123  FDSKIPYDSVDRG  135


>gi|317967919|ref|ZP_07969309.1| hypothetical protein SCB02_00127 [Synechococcus sp. CB0205]
Length=144

 Score = 82.0 bits (201),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 50/139 (36%), Positives = 73/139 (53%), Gaps = 2/139 (1%)

Query  2    TALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSN-RSVMQVST  60
            TALLDVNVLIAL  P+HVHH     WF    +  WA+  +T+   +RI  N R  +    
Sbjct  5    TALLDVNVLIALLDPHHVHHELCHGWFADRGAAPWASCAMTQNAVLRILGNPRYPISPGP  64

Query  61   TPAIAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRL  120
             P IA   L ++    GH FW  +  L+      R A+ ++ ++TD +L+ALA  +GG L
Sbjct  65   PPTIA-PHLDSLVEHPGHEFWDSNPSLLSQGFIARSALIDYAQITDLYLLALARHHGGTL  123

Query  121  VTFDAALADSASAGLVEVL  139
             T D  +    S   +E++
Sbjct  124  ATLDKRIKVDGSQDALELI  142


>gi|340358885|ref|ZP_08681388.1| PIN family toxin-antitoxin system [Actinomyces sp. oral taxon 
448 str. F0400]
 gi|339885631|gb|EGQ75340.1| PIN family toxin-antitoxin system [Actinomyces sp. oral taxon 
448 str. F0400]
Length=148

 Score = 80.1 bits (196),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 49/125 (40%), Positives = 60/125 (48%), Gaps = 3/125 (2%)

Query  1    VTALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVST  60
            V  LLDVNV++AL   NH HH  A  WF       WAT PITE+ Y R+  N  V     
Sbjct  7    VLRLLDVNVMLALSLANHAHHRVATSWFEDV--GAWATCPITESAYCRLLLNSHVTGFEL  64

Query  61   TPAIAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRL  120
              +     L    S++GH    D   L    A D   +   R++TD HL+ LAAR G  L
Sbjct  65   GVSEVFDALRTFCSVSGHELIEDSASL-TAPAIDVSGLVGRRQITDFHLVDLAARSGALL  123

Query  121  VTFDA  125
             T DA
Sbjct  124  ATLDA  128


>gi|114331350|ref|YP_747572.1| PilT domain-containing protein [Nitrosomonas eutropha C91]
 gi|114308364|gb|ABI59607.1| PIN domain family protein [Nitrosomonas eutropha C91]
Length=142

 Score = 79.3 bits (194),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 47/134 (36%), Positives = 73/134 (55%), Gaps = 1/134 (0%)

Query  1    VTALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVST  60
            + ALLDVNVLIAL    HVHH  A +W  Q   +GWA+ P+T+ G +RI +  +  +  +
Sbjct  1    MRALLDVNVLIALLDAGHVHHVRASQWLEQEIIHGWASCPLTQNGCLRIMTQPAYPEALS  60

Query  61   TPAIAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRL  120
              A+A ++LA   +   H F  DD  L+     +   +  H ++ D +L+ LA R+  R 
Sbjct  61   LAAVA-SRLAQAIAHPTHAFVADDYSLLDAEQVNWQQMLGHWQIIDSYLLGLAVRHHCRF  119

Query  121  VTFDAALADSASAG  134
            V+FD+ L     +G
Sbjct  120  VSFDSRLNPDIVSG  133


>gi|240169388|ref|ZP_04748047.1| hypothetical protein MkanA1_08748 [Mycobacterium kansasii ATCC 
12478]
Length=133

 Score = 77.4 bits (189),  Expect = 6e-13, Method: Compositional matrix adjust.
 Identities = 51/126 (41%), Positives = 64/126 (51%), Gaps = 9/126 (7%)

Query  3    ALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVSTTP  62
            ALLD NVLIAL    HVHH  A  W +    NG+AT PIT+   VR      +M+     
Sbjct  3    ALLDSNVLIALVVAEHVHHDVAAAWLSA-RDNGFATCPITQGSLVRF-----LMRTGQPA  56

Query  63   AIAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRLVT  122
            A+A   + A+ +   H FWPD V       G    V  HR+VTD +L  LA    G+L T
Sbjct  57   AVAREVVGAVETAKRHEFWPDSVSFADVEIG---GVVGHRQVTDAYLAQLARSRNGQLAT  113

Query  123  FDAALA  128
             D+ LA
Sbjct  114  LDSGLA  119


>gi|256826277|ref|YP_003150237.1| nucleic acid-binding protein [Kytococcus sedentarius DSM 20547]
 gi|256689670|gb|ACV07472.1| predicted nucleic acid-binding protein, contains PIN domain [Kytococcus 
sedentarius DSM 20547]
Length=147

 Score = 77.0 bits (188),  Expect = 8e-13, Method: Compositional matrix adjust.
 Identities = 50/124 (41%), Positives = 64/124 (52%), Gaps = 2/124 (1%)

Query  1    VTALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVST  60
            V ALLDVN LIAL   +H  H AA RW  +  SNGWAT   T+ G++R+ S        T
Sbjct  7    VAALLDVNTLIALLDIDHRDHEAAHRWAEERLSNGWATCATTQMGFLRVISQPGYPSPIT  66

Query  61   TPAIAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRL  120
                A   L   T    H +W  +     GS    D ++ HR++TD +L+ALA    G L
Sbjct  67   VDE-AGRLLRRATDHPSHEYWSSEPQPCAGSVS-LDVITGHRQITDAYLLALAVHQNGCL  124

Query  121  VTFD  124
            VTFD
Sbjct  125  VTFD  128


>gi|336179654|ref|YP_004585029.1| PIN domain-containing protein family protein [Frankia symbiont 
of Datisca glomerata]
 gi|334860634|gb|AEH11108.1| PIN domain protein family protein [Frankia symbiont of Datisca 
glomerata]
Length=131

 Score = 75.5 bits (184),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 49/125 (40%), Positives = 69/125 (56%), Gaps = 9/125 (7%)

Query  4    LLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVSTTPA  63
            LLD NVLI L   +HVHH AA+ W    ++  +AT PITE   VR+     +++   +  
Sbjct  4    LLDANVLITLIVTDHVHHDAAEAWLAG-TAGRFATCPITEGSLVRL-----LIREGQSAQ  57

Query  64   IAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRLVTF  123
             A A ++A+   + H FWPD+V     SA     V  HR+VTD +L  LA  + GRL +F
Sbjct  58   TATAVVSAIAGDSRHEFWPDEVSY---SAVSMTGVIGHRQVTDAYLAYLARTHNGRLASF  114

Query  124  DAALA  128
            +  LA
Sbjct  115  NQGLA  119


>gi|15607757|ref|NP_215131.1| hypothetical protein Rv0617 [Mycobacterium tuberculosis H37Rv]
 gi|15840020|ref|NP_335057.1| hypothetical protein MT0646 [Mycobacterium tuberculosis CDC1551]
 gi|31791800|ref|NP_854293.1| hypothetical protein Mb0634 [Mycobacterium bovis AF2122/97]
 79 more sequence titles
 Length=133

 Score = 72.8 bits (177),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 51/129 (40%), Positives = 69/129 (54%), Gaps = 11/129 (8%)

Query  1    VTALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVST  60
            +T LLD NVLIAL    HVHH AA  W    S  G+AT P+T+   VR      +++   
Sbjct  1    MTVLLDANVLIALVVAEHVHHDAAADWLMA-SDTGFATCPMTQGSLVRF-----LVRSGQ  54

Query  61   TPAIAIAQLAAMTSLAGHTFWPDDVPLI-VGSAGDRDAVSNHRRVTDCHLIALAARYGGR  119
            + A A   ++A+   + H FWPD +    V  AG    V  HR+VTD +L  LA  + G+
Sbjct  55   SAAAARDVVSAVQCTSRHEFWPDALSFAGVEVAG----VVGHRQVTDAYLAQLARSHDGQ  110

Query  120  LVTFDAALA  128
            L T D+ LA
Sbjct  111  LATLDSGLA  119


>gi|87123276|ref|ZP_01079127.1| hypothetical protein RS9917_05435 [Synechococcus sp. RS9917]
 gi|86168996|gb|EAQ70252.1| hypothetical protein RS9917_05435 [Synechococcus sp. RS9917]
Length=143

 Score = 69.3 bits (168),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 43/124 (35%), Positives = 66/124 (54%), Gaps = 1/124 (0%)

Query  1    VTALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVST  60
            + ALLD+NV+IAL    H  H+ A +W +  ++ GWA+ PI++ G +RI S  S      
Sbjct  1    MRALLDINVIIALLDGQHSLHSTASQWLSHHAAAGWASCPISQNGVIRIMSQPSYPNAQP  60

Query  61   TPAIAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRL  120
              AIA ++LA       H FW   + L+         +   R++TD +L+A+A    G L
Sbjct  61   PAAIA-SRLAEACRHPSHQFWGGALSLLDPRHLKWHCLLGPRQITDAYLLAVAVANDGCL  119

Query  121  VTFD  124
            V+FD
Sbjct  120  VSFD  123


>gi|324997204|ref|ZP_08118316.1| toxin [Pseudonocardia sp. P1]
Length=141

 Score = 62.8 bits (151),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 47/128 (37%), Positives = 60/128 (47%), Gaps = 11/128 (8%)

Query  2    TALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVSTT  61
            T LLD NVLIAL    H HH  A  W  +     +A  P+ E   VR      +++   T
Sbjct  3    TYLLDANVLIALTVTEHEHHDRASAWGARIER--FALCPVVEGALVRF-----LVRAGET  55

Query  62   PAIAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIAL-AARYGGRL  120
            P+ A   L A+ +L G  FWPD +       G    V  HR+VTD +L +L AA  G   
Sbjct  56   PSTATGLLRAVHALPGCEFWPDSLSFADARLGH---VGGHRQVTDAYLTSLVAAVPGASP  112

Query  121  VTFDAALA  128
             T D  LA
Sbjct  113  ATLDEGLA  120


>gi|320109069|ref|YP_004184659.1| PIN domain-containing protein family protein [Terriglobus saanensis 
SP1PR4]
 gi|319927590|gb|ADV84665.1| PIN domain protein family protein [Terriglobus saanensis SP1PR4]
Length=147

 Score = 61.2 bits (147),  Expect = 5e-08, Method: Compositional matrix adjust.
 Identities = 42/124 (34%), Positives = 61/124 (50%), Gaps = 3/124 (2%)

Query  4    LLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVSTTPA  63
            LLDVNV +AL   +H HH     WF    S  WA  P TEAG++R ++     Q++ T A
Sbjct  9    LLDVNVFVALLSEDHTHHQLVTAWFNT-PSLLWAICPFTEAGFLRNATAPRPGQITMTEA  67

Query  64   IAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRLVTF  123
             A+  LA M  + G+ + P         +     +   ++VTD +L+ LA R    LVT 
Sbjct  68   TAV--LARMAQVPGYHYLPITADWRSLCSPFSTRLYGTKQVTDAYLLGLAVREDLVLVTM  125

Query  124  DAAL  127
            D  +
Sbjct  126  DKGI  129


>gi|16264146|ref|NP_436938.1| hypothetical protein SM_b20412 [Sinorhizobium meliloti 1021]
 gi|15140271|emb|CAC48798.1| CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti 1021]
Length=54

 Score = 57.8 bits (138),  Expect = 6e-07, Method: Compositional matrix adjust.
 Identities = 28/52 (54%), Positives = 32/52 (62%), Gaps = 0/52 (0%)

Query  1   VTALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSN  52
           +T LLDVNVLIAL  P+H+ H  A  WF       WAT PITE G +RI  N
Sbjct  1   MTFLLDVNVLIALIDPSHIGHDDAHEWFASIGQTAWATCPITENGVIRIVGN  52


>gi|320108460|ref|YP_004184050.1| PIN domain-containing protein family protein [Terriglobus saanensis 
SP1PR4]
 gi|319926981|gb|ADV84056.1| PIN domain protein family protein [Terriglobus saanensis SP1PR4]
Length=142

 Score = 57.0 bits (136),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 44/134 (33%), Positives = 63/134 (48%), Gaps = 4/134 (2%)

Query  6    DVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQV---STTP  62
            DVNV +AL    H H   AQ W+    S       +T+ G++RI +N++ MQ    +   
Sbjct  8    DVNVWLALTGETHEHSRPAQIWYGTLISETLLFCRMTQLGFLRILTNKTAMQADVKTNLQ  67

Query  63   AIAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRLVT  122
            A+ I Q    T  A +   PD++     S     A S+ +   D +L A A   G RLVT
Sbjct  68   ALRIYQQWIQTDGARYREEPDNMEAAFASIASTTA-SSPKLWNDAYLSAFAVTAGLRLVT  126

Query  123  FDAALADSASAGLV  136
            FD ALA   S  ++
Sbjct  127  FDRALARRTSGSIL  140


>gi|218459869|ref|ZP_03499960.1| hypothetical protein RetlK5_10369 [Rhizobium etli Kim 5]
Length=100

 Score = 54.3 bits (129),  Expect = 6e-06, Method: Compositional matrix adjust.
 Identities = 30/73 (42%), Positives = 45/73 (62%), Gaps = 4/73 (5%)

Query  61   TPAIAIAQLAAMTSLAGHTFWPDDVPLIVGSAGD--RDAVSNHRRVTDCHLIALAARYGG  118
            +PA+ +  +  + SL GH+FWPDDV L+   +GD     +    +VTD +L+ALA   GG
Sbjct  14   SPALVMEIVRKLRSLPGHSFWPDDVSLV--GSGDIAPTKILTPGQVTDTYLLALAKARGG  71

Query  119  RLVTFDAALADSA  131
            +L TFD  L+ +A
Sbjct  72   QLATFDRKLSAAA  84


>gi|16264145|ref|NP_436937.1| hypothetical protein SM_b20411 [Sinorhizobium meliloti 1021]
 gi|15140270|emb|CAC48797.1| CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti 1021]
Length=82

 Score = 53.9 bits (128),  Expect = 7e-06, Method: Compositional matrix adjust.
 Identities = 28/63 (45%), Positives = 38/63 (61%), Gaps = 0/63 (0%)

Query  69   LAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRLVTFDAALA  128
            +A + SL GH FWPDDV L+  S      +    +VTD +L+ALA   GG+L TFD  L+
Sbjct  4    VAKLRSLPGHVFWPDDVSLVGSSDIIPSKILTSGQVTDTYLLALAKARGGKLATFDRKLS  63

Query  129  DSA  131
             +A
Sbjct  64   AAA  66


>gi|124515583|gb|EAY57093.1| conserved hypothetical protein [Leptospirillum rubarum]
Length=193

 Score = 52.8 bits (125),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 34/114 (30%), Positives = 58/114 (51%), Gaps = 3/114 (2%)

Query  3    ALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVSTTP  62
            +LLD+NVLI L   +HV H+A++   +  +++GW++ P+T+ G + I S        T P
Sbjct  71   SLLDINVLIVLLDSDHVFHSASREGLSLHATDGWSSCPLTDNGCMCIMS--CPNDPDTIP  128

Query  63   AIAIA-QLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAAR  115
               I  +L+   S   H FWP+DV  +             R++TD   ++ + R
Sbjct  129  VSRIRDRLSEAASGPPHQFWPEDVHFLDAGVAVASRTHGPRQITDLSWLSPSGR  182


>gi|190895067|ref|YP_001985360.1| hypothetical protein RHECIAT_PC0000733 [Rhizobium etli CIAT 652]
 gi|190700728|gb|ACE94810.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length=82

 Score = 52.0 bits (123),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 28/62 (46%), Positives = 40/62 (65%), Gaps = 4/62 (6%)

Query  72   MTSLAGHTFWPDDVPLIVGSAGD--RDAVSNHRRVTDCHLIALAARYGGRLVTFDAALAD  129
            + SL GH+FWPDDV L+   +GD     +    +VTD +L+ALA  +GG+L TFD  L+ 
Sbjct  7    LRSLPGHSFWPDDVSLV--GSGDIAPTKILTSGQVTDTYLLALAKAHGGQLATFDRKLSA  64

Query  130  SA  131
            +A
Sbjct  65   AA  66


>gi|227876599|ref|ZP_03994709.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
 gi|227842800|gb|EEJ52999.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
Length=130

 Score = 48.1 bits (113),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 37/125 (30%), Positives = 53/125 (43%), Gaps = 10/125 (8%)

Query  4    LLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVMQVSTTPA  63
            L+D N LIA     H HH    RWF Q  ++   T PITE    R      +++     +
Sbjct  5    LIDANALIAFNISTHQHHDVVLRWFAQ--ADTVLTCPITEGALFRF-----IIRNHFDFS  57

Query  64   IAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGGRLVTF  123
            +A   L    ++      PDD+        +   V   R+VTD +L  LA  +   L TF
Sbjct  58   VACQLLTDFCAIPKVQRIPDDLHY---DDANWTGVRGFRQVTDVYLAELALHHDALLATF  114

Query  124  DAALA  128
            D  +A
Sbjct  115  DQGIA  119


>gi|33865109|ref|NP_896668.1| hypothetical protein SYNW0573 [Synechococcus sp. WH 8102]
 gi|33638793|emb|CAE07088.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
Length=144

 Score = 45.1 bits (105),  Expect = 0.003, Method: Compositional matrix adjust.
 Identities = 44/140 (32%), Positives = 61/140 (44%), Gaps = 2/140 (1%)

Query  1    VTALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVM-QVS  59
            +  L D+NV +AL  PNH HH++A +++ + +S        T  G VR+     VM   +
Sbjct  4    IADLPDLNVWLALASPNHKHHSSAVQYWEKQASQQVLFCTTTALGLVRLVMQPKVMGGAA  63

Query  60   TTPAIAIAQLAAMTSLAGHTF-WPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYGG  118
              PA A A L       G +   P      V     R A    R  TD HL ALA     
Sbjct  64   LMPADASALLETFLQQPGVSHAQPTSDGWDVFHLLMRQADLTPRLCTDAHLAALAITNQW  123

Query  119  RLVTFDAALADSASAGLVEV  138
            RLV+FD      +   L+E+
Sbjct  124  RLVSFDQDFQLFSGLNLLEL  143


>gi|332797202|ref|YP_004458702.1| VapC-type toxin [Acidianus hospitalis W1]
 gi|332694937|gb|AEE94404.1| VapC-type toxin [Acidianus hospitalis W1]
Length=122

 Score = 43.1 bits (100),  Expect = 0.014, Method: Compositional matrix adjust.
 Identities = 30/131 (23%), Positives = 57/131 (44%), Gaps = 17/131 (12%)

Query  1    VTALLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSN---RSVMQ  57
            + A++D N +IA+ + +HV+H  A + + +          ITE  Y  I  N     + +
Sbjct  1    MEAVVDTNFIIAVMFKDHVNHDEAIKEWEKLDKVYLPLISITEIAYFLIKHNIDLNVLNE  60

Query  58   VSTTPAIAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCHLIALAARYG  117
            + + P I I +              + V  I  + G +D + ++    D  ++++A R  
Sbjct  61   ILSDPKIEIIE--------------NSVEDISYALGKKDEIKSYDDFNDFLILSVAIRQN  106

Query  118  GRLVTFDAALA  128
              L+TFD  L 
Sbjct  107  LPLLTFDKKLK  117


>gi|254430307|ref|ZP_05044010.1| hypothetical protein CPCC7001_197 [Cyanobium sp. PCC 7001]
 gi|197624760|gb|EDY37319.1| hypothetical protein CPCC7001_197 [Cyanobium sp. PCC 7001]
Length=144

 Score = 42.7 bits (99),  Expect = 0.018, Method: Compositional matrix adjust.
 Identities = 40/136 (30%), Positives = 56/136 (42%), Gaps = 28/136 (20%)

Query  4    LLDVNVLIALGWPNHVHHAAAQRWFTQFSSNGWATTPITEAGYVRISSNRSVM-------  56
            L D+NV +AL    H+HH  A  ++ Q ++       +T  G VR+ S   +M       
Sbjct  7    LPDLNVWLALASSQHIHHRQALHYWEQLAAEQVLFCTVTALGLVRLVSQPRLMGDAVKNA  66

Query  57   --------QVSTTPAIAIAQLAAMTSLAGHTFWPDDVPLIVGSAGDRDAVSNHRRVTDCH  108
                         P +A+A        A H  W  DV   +   G+       R  TD H
Sbjct  67   AEASELLAAFCRQPGVALAP-------AEHDGW--DVFHRLMRKGELPP----RLCTDAH  113

Query  109  LIALAARYGGRLVTFD  124
            L ALA  +G RLV+FD
Sbjct  114  LAALAMTHGWRLVSFD  129



Lambda     K      H
   0.321    0.130    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 131443546824


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40