BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2539c
Length=176
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609676|ref|NP_217055.1| shikimate kinase [Mycobacterium tub... 343 5e-93
gi|118138559|pdb|2IYQ|A Chain A, Shikimate Kinase From Mycobacte... 343 6e-93
gi|340627555|ref|YP_004746007.1| shikimate kinase AROK [Mycobact... 340 7e-92
gi|240170732|ref|ZP_04749391.1| shikimate kinase [Mycobacterium ... 303 9e-81
gi|254821805|ref|ZP_05226806.1| shikimate kinase [Mycobacterium ... 300 5e-80
gi|342858639|ref|ZP_08715294.1| shikimate kinase [Mycobacterium ... 296 9e-79
gi|108799320|ref|YP_639517.1| shikimate kinase [Mycobacterium sp... 293 6e-78
gi|145224339|ref|YP_001135017.1| shikimate kinase [Mycobacterium... 280 6e-74
gi|183982189|ref|YP_001850480.1| shikimate kinase AroK [Mycobact... 278 2e-73
gi|333990974|ref|YP_004523588.1| shikimate kinase AroK [Mycobact... 278 2e-73
gi|120403631|ref|YP_953460.1| shikimate kinase [Mycobacterium va... 278 3e-73
gi|41407190|ref|NP_960026.1| shikimate kinase [Mycobacterium avi... 275 1e-72
gi|118471061|ref|YP_887348.1| shikimate kinase [Mycobacterium sm... 275 1e-72
gi|118617379|ref|YP_905711.1| shikimate kinase [Mycobacterium ul... 275 2e-72
gi|15827179|ref|NP_301442.1| shikimate kinase [Mycobacterium lep... 267 5e-70
gi|169629926|ref|YP_001703575.1| shikimate kinase [Mycobacterium... 262 2e-68
gi|296170777|ref|ZP_06852349.1| shikimate kinase [Mycobacterium ... 259 1e-67
gi|333919515|ref|YP_004493096.1| Shikimate kinase [Amycolicicocc... 207 4e-52
gi|325672559|ref|ZP_08152255.1| shikimate kinase [Rhodococcus eq... 206 8e-52
gi|111024091|ref|YP_707063.1| shikimate kinase [Rhodococcus jost... 201 3e-50
gi|312139557|ref|YP_004006893.1| shikimate kinase arok [Rhodococ... 198 3e-49
gi|226366331|ref|YP_002784114.1| shikimate kinase [Rhodococcus o... 197 4e-49
gi|317508443|ref|ZP_07966113.1| shikimate kinase [Segniliparus r... 192 2e-47
gi|296394328|ref|YP_003659212.1| shikimate kinase [Segniliparus ... 191 3e-47
gi|229493442|ref|ZP_04387227.1| shikimate kinase [Rhodococcus er... 181 5e-44
gi|226306479|ref|YP_002766439.1| shikimate kinase [Rhodococcus e... 179 1e-43
gi|54025606|ref|YP_119848.1| shikimate kinase [Nocardia farcinic... 177 5e-43
gi|296140316|ref|YP_003647559.1| shikimate kinase [Tsukamurella ... 174 4e-42
gi|300784640|ref|YP_003764931.1| shikimate kinase [Amycolatopsis... 172 3e-41
gi|213966135|ref|ZP_03394322.1| shikimate kinase [Corynebacteriu... 171 3e-41
gi|257055575|ref|YP_003133407.1| shikimate kinase [Saccharomonos... 167 6e-40
gi|319950551|ref|ZP_08024461.1| shikimate kinase [Dietzia cinnam... 166 1e-39
gi|25028297|ref|NP_738351.1| shikimate kinase [Corynebacterium e... 160 7e-38
gi|331697323|ref|YP_004333562.1| Shikimate kinase [Pseudonocardi... 159 2e-37
gi|256379261|ref|YP_003102921.1| shikimate kinase [Actinosynnema... 158 4e-37
gi|237785592|ref|YP_002906297.1| Shikimate kinase [Corynebacteri... 158 4e-37
gi|302525855|ref|ZP_07278197.1| shikimate kinase [Streptomyces s... 157 5e-37
gi|72161495|ref|YP_289152.1| shikimate kinase [Thermobifida fusc... 157 6e-37
gi|134098636|ref|YP_001104297.1| shikimate kinase I [Saccharopol... 155 2e-36
gi|300858561|ref|YP_003783544.1| shikimate kinase [Corynebacteri... 155 3e-36
gi|117928515|ref|YP_873066.1| shikimate kinase [Acidothermus cel... 154 5e-36
gi|269127162|ref|YP_003300532.1| Shikimate kinase [Thermomonospo... 152 2e-35
gi|337290865|ref|YP_004629886.1| Shikimate kinase [Corynebacteri... 151 3e-35
gi|334696979|gb|AEG81776.1| Shikimate kinase [Corynebacterium ul... 151 3e-35
gi|337769303|emb|CCB78016.1| Shikimate kinase [Streptomyces catt... 150 6e-35
gi|334337117|ref|YP_004542269.1| Shikimate kinase [Isoptericola ... 150 9e-35
gi|145295744|ref|YP_001138565.1| shikimate kinase [Corynebacteri... 149 2e-34
gi|271967794|ref|YP_003341990.1| shikimate kinase [Streptosporan... 148 4e-34
gi|334565067|ref|ZP_08518058.1| shikimate kinase [Corynebacteriu... 148 4e-34
gi|68536109|ref|YP_250814.1| shikimate kinase [Corynebacterium j... 147 4e-34
>gi|15609676|ref|NP_217055.1| shikimate kinase [Mycobacterium tuberculosis H37Rv]
gi|15842073|ref|NP_337110.1| shikimate kinase [Mycobacterium tuberculosis CDC1551]
gi|31793721|ref|NP_856214.1| shikimate kinase [Mycobacterium bovis AF2122/97]
91 more sequence titles
gi|121638423|ref|YP_978647.1| shikimate kinase [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|148662377|ref|YP_001283900.1| shikimate kinase [Mycobacterium tuberculosis H37Ra]
gi|148823734|ref|YP_001288488.1| shikimate kinase [Mycobacterium tuberculosis F11]
gi|167967002|ref|ZP_02549279.1| shikimate kinase [Mycobacterium tuberculosis H37Ra]
gi|224990917|ref|YP_002645604.1| shikimate kinase [Mycobacterium bovis BCG str. Tokyo 172]
gi|253798381|ref|YP_003031382.1| shikimate kinase aroK [Mycobacterium tuberculosis KZN 1435]
gi|254366745|ref|ZP_04982788.1| shikimate kinase aroK [Mycobacterium tuberculosis str. Haarlem]
gi|254551588|ref|ZP_05142035.1| shikimate kinase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
gi|289444074|ref|ZP_06433818.1| shikimate kinase [Mycobacterium tuberculosis T46]
gi|289448187|ref|ZP_06437931.1| shikimate kinase aroK [Mycobacterium tuberculosis CPHL_A]
gi|289553672|ref|ZP_06442882.1| shikimate kinase aroK [Mycobacterium tuberculosis KZN 605]
gi|289570705|ref|ZP_06450932.1| shikimate kinase aroK [Mycobacterium tuberculosis T17]
gi|289575244|ref|ZP_06455471.1| shikimate kinase aroK [Mycobacterium tuberculosis K85]
gi|289746325|ref|ZP_06505703.1| shikimate kinase [Mycobacterium tuberculosis 02_1987]
gi|289751156|ref|ZP_06510534.1| shikimate kinase aroK [Mycobacterium tuberculosis T92]
gi|289754649|ref|ZP_06514027.1| shikimate kinase aroK [Mycobacterium tuberculosis EAS054]
gi|289758669|ref|ZP_06518047.1| shikimate kinase arok [Mycobacterium tuberculosis T85]
gi|289762707|ref|ZP_06522085.1| shikimate kinase aroK [Mycobacterium tuberculosis GM 1503]
gi|294994352|ref|ZP_06800043.1| shikimate kinase [Mycobacterium tuberculosis 210]
gi|297635149|ref|ZP_06952929.1| shikimate kinase [Mycobacterium tuberculosis KZN 4207]
gi|297732140|ref|ZP_06961258.1| shikimate kinase [Mycobacterium tuberculosis KZN R506]
gi|298526013|ref|ZP_07013422.1| shikimate kinase aroK [Mycobacterium tuberculosis 94_M4241A]
gi|306776813|ref|ZP_07415150.1| shikimate kinase aroK [Mycobacterium tuberculosis SUMu001]
gi|306780578|ref|ZP_07418915.1| shikimate kinase aroK [Mycobacterium tuberculosis SUMu002]
gi|306785341|ref|ZP_07423663.1| shikimate kinase aroK [Mycobacterium tuberculosis SUMu003]
gi|306789941|ref|ZP_07428263.1| shikimate kinase aroK [Mycobacterium tuberculosis SUMu004]
gi|306794022|ref|ZP_07432324.1| shikimate kinase aroK [Mycobacterium tuberculosis SUMu005]
gi|306798418|ref|ZP_07436720.1| shikimate kinase aroK [Mycobacterium tuberculosis SUMu006]
gi|306804298|ref|ZP_07440966.1| shikimate kinase aroK [Mycobacterium tuberculosis SUMu008]
gi|306807663|ref|ZP_07444331.1| shikimate kinase aroK [Mycobacterium tuberculosis SUMu007]
gi|306969864|ref|ZP_07482525.1| shikimate kinase aroK [Mycobacterium tuberculosis SUMu009]
gi|306972926|ref|ZP_07485587.1| shikimate kinase aroK [Mycobacterium tuberculosis SUMu010]
gi|307080639|ref|ZP_07489809.1| shikimate kinase aroK [Mycobacterium tuberculosis SUMu011]
gi|313659473|ref|ZP_07816353.1| shikimate kinase [Mycobacterium tuberculosis KZN V2475]
gi|339632566|ref|YP_004724208.1| shikimate kinase AROK (SK) [Mycobacterium africanum GM041182]
gi|61219237|sp|P0A4Z2.1|AROK_MYCTU RecName: Full=Shikimate kinase; Short=SK
gi|61219239|sp|P0A4Z3.1|AROK_MYCBO RecName: Full=Shikimate kinase; Short=SK
gi|166219249|sp|A1KLN6.1|AROK_MYCBP RecName: Full=Shikimate kinase; Short=SK
gi|166219250|sp|A5U5N8.1|AROK_MYCTA RecName: Full=Shikimate kinase; Short=SK
gi|21730653|pdb|1L4U|A Chain A, Crystal Structure Of Shikimate Kinase From Mycobacterium
Tuberculosis In Complex With Mgadp And Pt(Ii) At 1.8 Angstrom
Resolution
gi|21730654|pdb|1L4Y|A Chain A, Crystal Structure Of Shikimate Kinase From Mycobacterium
Tuberculosis In Complex With Mgadp At 2.0 Angstrom Resolution
gi|56554162|pdb|1U8A|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Shikimate
Kinase In Complex With Shikimate And Adp At 2.15 Angstrom
Resolution
gi|67464173|pdb|1WE2|A Chain A, Crystal Structure Of Shikimate Kinase From Mycobacterium
Tuberculosis In Complex With Mgadp And Shikimic Acid
gi|112489848|pdb|1ZYU|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Shikimate
Kinase In Complex With Shikimate And Amppcp At 2.85 Angstrom
Resolution
gi|112490652|pdb|2G1J|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Shikimate
Kinase At 2.0 Angstrom Resolution
gi|112490653|pdb|2G1J|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Shikimate
Kinase At 2.0 Angstrom Resolution
gi|112490654|pdb|2G1K|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Shikimate
Kinase In Complex With Shikimate At 1.75 Angstrom Resolution
gi|114793701|pdb|2DFN|A Chain A, Structure Of Shikimate Kinase From Mycobacterium Tuberculosis
Complexed With Adp And Shikimate At 1.9 Angstrons
Of Resolution
gi|126030237|pdb|2DFT|A Chain A, Structure Of Shikimate Kinase From Mycobacterium Tuberculosis
Complexed With Adp And Mg At 2.8 Angstrons Of Resolution
gi|126030238|pdb|2DFT|B Chain B, Structure Of Shikimate Kinase From Mycobacterium Tuberculosis
Complexed With Adp And Mg At 2.8 Angstrons Of Resolution
gi|126030239|pdb|2DFT|C Chain C, Structure Of Shikimate Kinase From Mycobacterium Tuberculosis
Complexed With Adp And Mg At 2.8 Angstrons Of Resolution
gi|126030240|pdb|2DFT|D Chain D, Structure Of Shikimate Kinase From Mycobacterium Tuberculosis
Complexed With Adp And Mg At 2.8 Angstrons Of Resolution
gi|212374935|pdb|3BAF|A Chain A, Crystal Structure Of Shikimate Kinase From Mycobacterium
Tuberculosis In Complex With Amp-Pnp
gi|1781063|emb|CAB06199.1| SHIKIMATE KINASE AROK (SK) [Mycobacterium tuberculosis H37Rv]
gi|13882354|gb|AAK46924.1| shikimate kinase [Mycobacterium tuberculosis CDC1551]
gi|31619315|emb|CAD94753.1| PROBABLE SHIKIMATE KINASE AROK (SK) [Mycobacterium bovis AF2122/97]
gi|121494071|emb|CAL72549.1| Probable shikimate kinase aroK [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|134152256|gb|EBA44301.1| shikimate kinase aroK [Mycobacterium tuberculosis str. Haarlem]
gi|148506529|gb|ABQ74338.1| shikimate kinase [Mycobacterium tuberculosis H37Ra]
gi|148722261|gb|ABR06886.1| shikimate kinase aroK [Mycobacterium tuberculosis F11]
gi|224774030|dbj|BAH26836.1| shikimate kinase [Mycobacterium bovis BCG str. Tokyo 172]
gi|253319884|gb|ACT24487.1| shikimate kinase aroK [Mycobacterium tuberculosis KZN 1435]
gi|289416993|gb|EFD14233.1| shikimate kinase [Mycobacterium tuberculosis T46]
gi|289421145|gb|EFD18346.1| shikimate kinase aroK [Mycobacterium tuberculosis CPHL_A]
gi|289438304|gb|EFD20797.1| shikimate kinase aroK [Mycobacterium tuberculosis KZN 605]
gi|289539675|gb|EFD44253.1| shikimate kinase aroK [Mycobacterium tuberculosis K85]
gi|289544459|gb|EFD48107.1| shikimate kinase aroK [Mycobacterium tuberculosis T17]
gi|289686853|gb|EFD54341.1| shikimate kinase [Mycobacterium tuberculosis 02_1987]
gi|289691743|gb|EFD59172.1| shikimate kinase aroK [Mycobacterium tuberculosis T92]
gi|289695236|gb|EFD62665.1| shikimate kinase aroK [Mycobacterium tuberculosis EAS054]
gi|289710213|gb|EFD74229.1| shikimate kinase aroK [Mycobacterium tuberculosis GM 1503]
gi|289714233|gb|EFD78245.1| shikimate kinase arok [Mycobacterium tuberculosis T85]
gi|298495807|gb|EFI31101.1| shikimate kinase aroK [Mycobacterium tuberculosis 94_M4241A]
gi|308214820|gb|EFO74219.1| shikimate kinase aroK [Mycobacterium tuberculosis SUMu001]
gi|308326592|gb|EFP15443.1| shikimate kinase aroK [Mycobacterium tuberculosis SUMu002]
gi|308330014|gb|EFP18865.1| shikimate kinase aroK [Mycobacterium tuberculosis SUMu003]
gi|308333631|gb|EFP22482.1| shikimate kinase aroK [Mycobacterium tuberculosis SUMu004]
gi|308337658|gb|EFP26509.1| shikimate kinase aroK [Mycobacterium tuberculosis SUMu005]
gi|308341313|gb|EFP30164.1| shikimate kinase aroK [Mycobacterium tuberculosis SUMu006]
gi|308345905|gb|EFP34756.1| shikimate kinase aroK [Mycobacterium tuberculosis SUMu007]
gi|308349130|gb|EFP37981.1| shikimate kinase aroK [Mycobacterium tuberculosis SUMu008]
gi|308352595|gb|EFP41446.1| shikimate kinase aroK [Mycobacterium tuberculosis SUMu009]
gi|308357697|gb|EFP46548.1| shikimate kinase aroK [Mycobacterium tuberculosis SUMu010]
gi|308361640|gb|EFP50491.1| shikimate kinase aroK [Mycobacterium tuberculosis SUMu011]
gi|323718895|gb|EGB28050.1| shikimate kinase aroK [Mycobacterium tuberculosis CDC1551A]
gi|326904154|gb|EGE51087.1| shikimate kinase aroK [Mycobacterium tuberculosis W-148]
gi|328458151|gb|AEB03574.1| shikimate kinase aroK [Mycobacterium tuberculosis KZN 4207]
gi|339299039|gb|AEJ51149.1| aroK, shikimate kinase [Mycobacterium tuberculosis CCDC5180]
gi|339331922|emb|CCC27625.1| shikimate kinase AROK (SK) [Mycobacterium africanum GM041182]
gi|341602461|emb|CCC65137.1| probable shikimate kinase aroK [Mycobacterium bovis BCG str.
Moreau RDJ]
gi|344220367|gb|AEN00998.1| shikimate kinase [Mycobacterium tuberculosis CTRI-2]
Length=176
Score = 343 bits (880), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 176/176 (100%), Positives = 176/176 (100%), Gaps = 0/176 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI
Sbjct 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL
Sbjct 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVPSPSEAAT 176
AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVPSPSEAAT
Sbjct 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVPSPSEAAT 176
>gi|118138559|pdb|2IYQ|A Chain A, Shikimate Kinase From Mycobacterium Tuberculosis In
Complex With Shikimate And Adp
gi|118138560|pdb|2IYR|A Chain A, Shikimate Kinase From Mycobacterium Tuberculosis In
Complex With Shikimate
gi|118138561|pdb|2IYR|B Chain B, Shikimate Kinase From Mycobacterium Tuberculosis In
Complex With Shikimate
8 more sequence titles
gi|118138562|pdb|2IYS|A Chain A, Shikimate Kinase From Mycobacterium Tuberculosis In
Complex With Shikimate, Open Lid (Conf. A)
gi|118138563|pdb|2IYT|A Chain A, Shikimate Kinase From Mycobacterium Tuberculosis In
Unliganded State, Open Lid (Conf. A)
gi|118138564|pdb|2IYU|A Chain A, Shikimate Kinase From Mycobacterium Tuberculosis In
Complex With Adp, Open Lid (Conf. A)
gi|118138565|pdb|2IYV|A Chain A, Shikimate Kinase From Mycobacterium Tuberculosis In
Complex With Adp, Open Lid (Conf. B)
gi|118138566|pdb|2IYW|A Chain A, Shikimate Kinase From Mycobacterium Tuberculosis In
Complex With Mgatp, Open Lid (Conf. B)
gi|118138567|pdb|2IYX|A Chain A, Shikimate Kinase From Mycobacterium Tuberculosis In
Complex With Shikimate And So4
gi|118138568|pdb|2IYY|A Chain A, Shikimate Kinase From Mycobacterium Tuberculosis In
Complex With Shikimate-3-Phosphate And So4
gi|118138569|pdb|2IYZ|A Chain A, Shikimate Kinase From Mycobacterium Tuberculosis In
Complex With Shikimate-3-Phosphate And Adp
Length=184
Score = 343 bits (880), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 176/176 (100%), Positives = 176/176 (100%), Gaps = 0/176 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI
Sbjct 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL
Sbjct 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVPSPSEAAT 176
AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVPSPSEAAT
Sbjct 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVPSPSEAAT 176
>gi|340627555|ref|YP_004746007.1| shikimate kinase AROK [Mycobacterium canettii CIPT 140010059]
gi|340005745|emb|CCC44911.1| shikimate kinase AROK (SK) [Mycobacterium canettii CIPT 140010059]
Length=176
Score = 340 bits (871), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 174/176 (99%), Positives = 175/176 (99%), Gaps = 0/176 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
MAPKAVLVGLPGSGKSTIGRRLAKALGV LLDTDVAIEQRTGRSIADIFATDGEQEFRRI
Sbjct 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVSLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL
Sbjct 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVPSPSEAAT 176
AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVR+ILSRLQVPSPSEAAT
Sbjct 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRYILSRLQVPSPSEAAT 176
>gi|240170732|ref|ZP_04749391.1| shikimate kinase [Mycobacterium kansasii ATCC 12478]
Length=171
Score = 303 bits (775), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 154/171 (91%), Positives = 163/171 (96%), Gaps = 2/171 (1%)
Query 8 VGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEEDVVRA 67
+GLPGSGKSTIGRRLAKALGVGLLDTD AIEQ+TGRSIADIFATDGEQEFRRIEEDVVRA
Sbjct 1 MGLPGSGKSTIGRRLAKALGVGLLDTDAAIEQQTGRSIADIFATDGEQEFRRIEEDVVRA 60
Query 68 ALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLLAGPDRAE 127
ALADHDGVLSLGGGAVTSPGV AALAG TVVYLEI+AAEGVRRTGGNT RPLLAGPDRAE
Sbjct 61 ALADHDGVLSLGGGAVTSPGVCAALAGQTVVYLEINAAEGVRRTGGNTARPLLAGPDRAE 120
Query 128 KYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVPS--PSEAAT 176
KYR+LMAKR PLYRRVAT+RVDTNRRNPGAVVR+I+SRLQ PS P++AAT
Sbjct 121 KYRSLMAKRIPLYRRVATIRVDTNRRNPGAVVRYIMSRLQTPSQTPTQAAT 171
>gi|254821805|ref|ZP_05226806.1| shikimate kinase [Mycobacterium intracellulare ATCC 13950]
Length=174
Score = 300 bits (768), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 151/170 (89%), Positives = 161/170 (95%), Gaps = 0/170 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
MAPKAVL+GLPGSGKSTIGRRLAKAL VG LDTD AIEQRTGR I +IFATDGE+EFRRI
Sbjct 1 MAPKAVLIGLPGSGKSTIGRRLAKALDVGFLDTDAAIEQRTGRRIDEIFATDGEREFRRI 60
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
EEDVVRAALADHDGVLSLGGGAVTSPGVR ALAGHTVVYLEISA EGVRRTGGNTVRPLL
Sbjct 61 EEDVVRAALADHDGVLSLGGGAVTSPGVREALAGHTVVYLEISATEGVRRTGGNTVRPLL 120
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVPS 170
AGPDRA+KYRALMA+R+PLYRR AT+RVDTNRRNPGAVVR+I+SRLQ P+
Sbjct 121 AGPDRADKYRALMAERSPLYRRAATIRVDTNRRNPGAVVRYIVSRLQAPA 170
>gi|342858639|ref|ZP_08715294.1| shikimate kinase [Mycobacterium colombiense CECT 3035]
gi|342134343|gb|EGT87523.1| shikimate kinase [Mycobacterium colombiense CECT 3035]
Length=174
Score = 296 bits (758), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 149/170 (88%), Positives = 161/170 (95%), Gaps = 0/170 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
MAPKAVLVGLPGSGKSTIGRRLAKALGV LDTDVAIEQ+TGR IADIFATDGE EFRRI
Sbjct 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVDFLDTDVAIEQQTGRRIADIFATDGEPEFRRI 60
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
EEDVVRAALA HDGV+SLGGGAVTSPGVR ALAGHTV+YLEISA+EGVRRTGGN VRPLL
Sbjct 61 EEDVVRAALAGHDGVVSLGGGAVTSPGVREALAGHTVIYLEISASEGVRRTGGNAVRPLL 120
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVPS 170
AGPDRA+KYRAL+A+R+PLYRR AT+RVDTNRRNPGAVVR+I+SRLQ P+
Sbjct 121 AGPDRADKYRALLAERSPLYRRAATIRVDTNRRNPGAVVRYIVSRLQAPA 170
>gi|108799320|ref|YP_639517.1| shikimate kinase [Mycobacterium sp. MCS]
gi|119868436|ref|YP_938388.1| shikimate kinase [Mycobacterium sp. KMS]
gi|126434978|ref|YP_001070669.1| shikimate kinase [Mycobacterium sp. JLS]
gi|108769739|gb|ABG08461.1| shikimate kinase [Mycobacterium sp. MCS]
gi|119694525|gb|ABL91598.1| shikimate kinase [Mycobacterium sp. KMS]
gi|126234778|gb|ABN98178.1| shikimate kinase [Mycobacterium sp. JLS]
Length=235
Score = 293 bits (750), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 148/177 (84%), Positives = 165/177 (94%), Gaps = 1/177 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
MAP+AVLVGLPGSGKSTIGRRLAKALG+ LLDTD AIE+ TGR+IADIFATDGEQEFRRI
Sbjct 1 MAPRAVLVGLPGSGKSTIGRRLAKALGLTLLDTDAAIEETTGRTIADIFATDGEQEFRRI 60
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
EE+V+R+AL HDGVLSLGGGAVT+PGVR ALAGHTV+YLEISAAEGVRRTGG+TVRPLL
Sbjct 61 EEEVIRSALQTHDGVLSLGGGAVTTPGVRDALAGHTVIYLEISAAEGVRRTGGSTVRPLL 120
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVPSP-SEAAT 176
AGPDRAEKY+ALM R PLYRRVATMRV+TNRRNPGAVVRHI++RL+ +P +EAAT
Sbjct 121 AGPDRAEKYKALMDARVPLYRRVATMRVNTNRRNPGAVVRHIVARLEKSAPRAEAAT 177
>gi|145224339|ref|YP_001135017.1| shikimate kinase [Mycobacterium gilvum PYR-GCK]
gi|315444671|ref|YP_004077550.1| shikimate kinase [Mycobacterium sp. Spyr1]
gi|145216825|gb|ABP46229.1| shikimate kinase [Mycobacterium gilvum PYR-GCK]
gi|315262974|gb|ADT99715.1| shikimate kinase [Mycobacterium sp. Spyr1]
Length=220
Score = 280 bits (716), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 139/169 (83%), Positives = 155/169 (92%), Gaps = 0/169 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
MAPKAVL+GLPGSGKSTIGRRLAK+LGV LLDTD AIE+ TGR+IADIFATDGE EFRRI
Sbjct 1 MAPKAVLIGLPGSGKSTIGRRLAKSLGVPLLDTDNAIEETTGRTIADIFATDGESEFRRI 60
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
EE V+R ALA HDGVLSLGGGAVT+ GVR ALAGHTV+YLEISAAEGVRRTGG+TVRPLL
Sbjct 61 EEQVIRDALATHDGVLSLGGGAVTTEGVREALAGHTVIYLEISAAEGVRRTGGSTVRPLL 120
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVP 169
AGPDR EK++ALMA+R PLYR+VATMRV+TN RNPGAVVR+I +RL+ P
Sbjct 121 AGPDRGEKFKALMAERVPLYRQVATMRVNTNHRNPGAVVRYICARLENP 169
>gi|183982189|ref|YP_001850480.1| shikimate kinase AroK [Mycobacterium marinum M]
gi|238690936|sp|B2HNC7.1|AROK_MYCMM RecName: Full=Shikimate kinase; Short=SK
gi|183175515|gb|ACC40625.1| shikimate kinase AroK [Mycobacterium marinum M]
Length=184
Score = 278 bits (712), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/174 (87%), Positives = 166/174 (96%), Gaps = 0/174 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTD AIEQ+ GRSIA+IFATDGE+EFRRI
Sbjct 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDAAIEQQAGRSIAEIFATDGEEEFRRI 60
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
EE+VVRAALADHDGVLSLGGGAVTSPGVR+AL GHTVVYLEISAAEGVRRTGG+ VRPLL
Sbjct 61 EEEVVRAALADHDGVLSLGGGAVTSPGVRSALDGHTVVYLEISAAEGVRRTGGSNVRPLL 120
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVPSPSEA 174
AGPDRAEK+RALM++R PLYRRV+T+RVDTNRRNPGAVVR+I+SRL P+P+ +
Sbjct 121 AGPDRAEKFRALMSQRIPLYRRVSTIRVDTNRRNPGAVVRYIMSRLDDPTPNTS 174
>gi|333990974|ref|YP_004523588.1| shikimate kinase AroK [Mycobacterium sp. JDM601]
gi|333486942|gb|AEF36334.1| shikimate kinase AroK [Mycobacterium sp. JDM601]
Length=199
Score = 278 bits (712), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 141/169 (84%), Positives = 156/169 (93%), Gaps = 0/169 (0%)
Query 8 VGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEEDVVRA 67
+GLPG+GKSTIGRRLAKALGV +LDTD AIE R GRSIADIFATDGEQEFRRIEE+VVRA
Sbjct 1 MGLPGAGKSTIGRRLAKALGVEMLDTDAAIEARAGRSIADIFATDGEQEFRRIEEEVVRA 60
Query 68 ALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLLAGPDRAE 127
ALADHDGVLSLGGGAVTSPGVR ALAGHTVV+LEISAAEGVRRTGG+TVRPLLAGP RAE
Sbjct 61 ALADHDGVLSLGGGAVTSPGVREALAGHTVVFLEISAAEGVRRTGGSTVRPLLAGPGRAE 120
Query 128 KYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVPSPSEAAT 176
K+R LMA+R PLYRR+AT+RV+TNRRNPGAVVR+I+SRL+ +P AT
Sbjct 121 KFRELMAQRVPLYRRLATIRVNTNRRNPGAVVRYIVSRLEATAPGGKAT 169
>gi|120403631|ref|YP_953460.1| shikimate kinase [Mycobacterium vanbaalenii PYR-1]
gi|119956449|gb|ABM13454.1| shikimate kinase [Mycobacterium vanbaalenii PYR-1]
Length=220
Score = 278 bits (710), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 137/169 (82%), Positives = 154/169 (92%), Gaps = 0/169 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
MAP+AVLVGLPGSGKSTIGRRLAK L + LLDTDVAIE+ TGR+IADIFATDGE EFRRI
Sbjct 1 MAPRAVLVGLPGSGKSTIGRRLAKTLQLPLLDTDVAIEKATGRTIADIFATDGEAEFRRI 60
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
EE V+R ALA HDGVLSLGGGAVT+ GVR AL GHTV+YLEISAAEGVRRTGG+TVRPLL
Sbjct 61 EESVIRDALATHDGVLSLGGGAVTTEGVREALCGHTVIYLEISAAEGVRRTGGSTVRPLL 120
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVP 169
AGPDR EK++ALMA+R PLYR+VATMR++TN RNPGAVVRHI++RL+ P
Sbjct 121 AGPDRNEKFKALMAERVPLYRQVATMRINTNHRNPGAVVRHIVARLENP 169
>gi|41407190|ref|NP_960026.1| shikimate kinase [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118462476|ref|YP_882598.1| shikimate kinase [Mycobacterium avium 104]
gi|254775862|ref|ZP_05217378.1| shikimate kinase [Mycobacterium avium subsp. avium ATCC 25291]
gi|81571415|sp|Q741J8.1|AROK_MYCPA RecName: Full=Shikimate kinase; Short=SK
gi|166219248|sp|A0QI60.1|AROK_MYCA1 RecName: Full=Shikimate kinase; Short=SK
gi|41395541|gb|AAS03409.1| AroK [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118163763|gb|ABK64660.1| shikimate kinase [Mycobacterium avium 104]
gi|336461557|gb|EGO40424.1| shikimate kinase [Mycobacterium avium subsp. paratuberculosis
S397]
Length=176
Score = 275 bits (704), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 151/176 (86%), Positives = 162/176 (93%), Gaps = 0/176 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
MAPKAVL+GLPGSGKSTIGRRLAKALGVG LDTD AIEQRTGR IA+IFATDGE+EFRRI
Sbjct 1 MAPKAVLIGLPGSGKSTIGRRLAKALGVGFLDTDAAIEQRTGRPIAEIFATDGEREFRRI 60
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
EE+VVRAAL +HDGVLSLGGGAVTSPGVR ALAGHTVVYLEISA EGVRRTGGNTVRPLL
Sbjct 61 EEEVVRAALTEHDGVLSLGGGAVTSPGVREALAGHTVVYLEISATEGVRRTGGNTVRPLL 120
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVPSPSEAAT 176
AGPDRAEKYRAL+A+R+PLYRR AT+RVDTNRRNPGAVVR+I+SRL AAT
Sbjct 121 AGPDRAEKYRALLAERSPLYRRAATIRVDTNRRNPGAVVRYIVSRLPATDACRAAT 176
>gi|118471061|ref|YP_887348.1| shikimate kinase [Mycobacterium smegmatis str. MC2 155]
gi|118172348|gb|ABK73244.1| shikimate kinase [Mycobacterium smegmatis str. MC2 155]
Length=244
Score = 275 bits (704), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 134/173 (78%), Positives = 156/173 (91%), Gaps = 0/173 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
MAP+AVL+GLPGSGKSTIGRRLAK L V +LDTD IE+ GR+IADIFATDGE+EFRRI
Sbjct 1 MAPRAVLIGLPGSGKSTIGRRLAKVLDVSMLDTDAVIEETAGRTIADIFATDGEKEFRRI 60
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
EE+V+R+AL HDGVLSLGGGAVT+PGVR ALAGHTVVYLEISAAEGVRRTGG+TVRPLL
Sbjct 61 EEEVIRSALQTHDGVLSLGGGAVTTPGVREALAGHTVVYLEISAAEGVRRTGGSTVRPLL 120
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVPSPSE 173
AG DRAEKYR LMA+R PLYR+VAT+R++TNRRNPGAVVR I++R++ P ++
Sbjct 121 AGGDRAEKYRKLMAERVPLYRKVATIRINTNRRNPGAVVRTIVARMENPQQAK 173
>gi|118617379|ref|YP_905711.1| shikimate kinase [Mycobacterium ulcerans Agy99]
gi|166219251|sp|A0PPH1.1|AROK_MYCUA RecName: Full=Shikimate kinase; Short=SK
gi|118569489|gb|ABL04240.1| shikimate kinase AroK [Mycobacterium ulcerans Agy99]
Length=184
Score = 275 bits (703), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 148/174 (86%), Positives = 164/174 (95%), Gaps = 0/174 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
MAPKAVLVGLPGSGKSTIGRRLAKALGV LLDTD AIEQ+ GRSIA+IFATDGE+EFRRI
Sbjct 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVSLLDTDAAIEQQAGRSIAEIFATDGEEEFRRI 60
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
EE+VVRAAL DHDGVLSLGGGAVTSPGVR+AL GHTVVYLEISAAEGVRRTGG+ VRPLL
Sbjct 61 EEEVVRAALVDHDGVLSLGGGAVTSPGVRSALDGHTVVYLEISAAEGVRRTGGSNVRPLL 120
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVPSPSEA 174
AGPDRAEK+RALM++R PLYRRV+T+RVDTNRRNPGAVVR+I+SRL P+P+ +
Sbjct 121 AGPDRAEKFRALMSQRIPLYRRVSTIRVDTNRRNPGAVVRYIMSRLDDPTPNTS 174
>gi|15827179|ref|NP_301442.1| shikimate kinase [Mycobacterium leprae TN]
gi|221229657|ref|YP_002503073.1| shikimate kinase [Mycobacterium leprae Br4923]
gi|20137461|sp|Q9CCS5.1|AROK_MYCLE RecName: Full=Shikimate kinase; Short=SK
gi|13092727|emb|CAC30025.1| putative shikimate kinase [Mycobacterium leprae]
gi|219932764|emb|CAR70610.1| putative shikimate kinase [Mycobacterium leprae Br4923]
Length=199
Score = 267 bits (682), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 133/167 (80%), Positives = 151/167 (91%), Gaps = 0/167 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
MAPKAVLVGLPG+GKSTIGRRL+KALGV LLDTD AIE++TGRSIADIFA DGE+EFRRI
Sbjct 1 MAPKAVLVGLPGAGKSTIGRRLSKALGVSLLDTDAAIEKQTGRSIADIFAIDGEEEFRRI 60
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
EE VVRAAL +HDGV+SLGGGAVTSPGV AALAGH V+YLEI+A E +RR G+TVRPLL
Sbjct 61 EEGVVRAALVEHDGVVSLGGGAVTSPGVCAALAGHIVIYLEINAEEAMRRACGSTVRPLL 120
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQ 167
AGPDRAEK++ LMA+R PLYRRVAT+RVDTN N GAVVR+I++RLQ
Sbjct 121 AGPDRAEKFQDLMARRVPLYRRVATIRVDTNCHNLGAVVRYIMARLQ 167
>gi|169629926|ref|YP_001703575.1| shikimate kinase [Mycobacterium abscessus ATCC 19977]
gi|169241893|emb|CAM62921.1| Shikimate kinase (AroK) [Mycobacterium abscessus]
Length=216
Score = 262 bits (669), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 130/169 (77%), Positives = 146/169 (87%), Gaps = 0/169 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
M+PKAVLVGLPGSGKSTIGRRLAKALGV + DTD IE GR+IA IFA DGE EFRRI
Sbjct 1 MSPKAVLVGLPGSGKSTIGRRLAKALGVNVYDTDTGIETEAGRTIAQIFANDGEPEFRRI 60
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
EE V+R AL DGV+SLGGGAV +PGVR ALAGHTVVYLEISAAEG+RRTGG+ VRPLL
Sbjct 61 EESVIRQALDQQDGVVSLGGGAVLTPGVREALAGHTVVYLEISAAEGIRRTGGSVVRPLL 120
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVP 169
AGPDRAEKY ALM++R PLYR VAT++V+T+RRNPGAVVR I+SRL+ P
Sbjct 121 AGPDRAEKYHALMSQRVPLYREVATIKVNTDRRNPGAVVRMIVSRLENP 169
>gi|296170777|ref|ZP_06852349.1| shikimate kinase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295894592|gb|EFG74329.1| shikimate kinase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=181
Score = 259 bits (662), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/181 (81%), Positives = 161/181 (89%), Gaps = 5/181 (2%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
MAP+AVLVGLPGSGKSTIGRRLAKALGVG LDTD AIEQRTGR+I DIFA DGE+EFRRI
Sbjct 1 MAPRAVLVGLPGSGKSTIGRRLAKALGVGFLDTDAAIEQRTGRTIPDIFAADGEREFRRI 60
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
EE+ VRAALADHDGV+SLGGGAVTSPGV ALAGHTV+YLEISA EGVRRTGG+ VRPLL
Sbjct 61 EEEAVRAALADHDGVVSLGGGAVTSPGVCEALAGHTVIYLEISAGEGVRRTGGSAVRPLL 120
Query 121 AGPDRAE---KYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVP--SPSEAA 175
A D AE KY+ALMA+R PLYRRV+T+RVDTNRRNPGAVVR+I+SRLQ P + +EAA
Sbjct 121 AATDEAEKYSKYKALMAQRVPLYRRVSTIRVDTNRRNPGAVVRYIVSRLQTPENAHAEAA 180
Query 176 T 176
T
Sbjct 181 T 181
>gi|333919515|ref|YP_004493096.1| Shikimate kinase [Amycolicicoccus subflavus DQS3-9A1]
gi|333481736|gb|AEF40296.1| Shikimate kinase [Amycolicicoccus subflavus DQS3-9A1]
Length=203
Score = 207 bits (527), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 105/166 (64%), Positives = 130/166 (79%), Gaps = 0/166 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
M P+A+LVG PG+GKSTIGRRLA ALGV DTD AIE+ TGRSI +IF+TDGE FR+I
Sbjct 1 MPPRAILVGPPGAGKSTIGRRLASALGVPFYDTDAAIERETGRSIREIFSTDGEAGFRKI 60
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
EEDVV A+A+ G++SLGGGAV SP + AL GHTV+YLEI+ AEG+RRTG N RPLL
Sbjct 61 EEDVVGRAIAEQTGIVSLGGGAVLSPVTQQALRGHTVIYLEITVAEGLRRTGANKSRPLL 120
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRL 166
G D KYRALM +R P+Y++V+T+RV TN R+PG V++IL R+
Sbjct 121 DGDDPGAKYRALMRRRRPIYKKVSTLRVRTNGRSPGRSVQYILRRI 166
>gi|325672559|ref|ZP_08152255.1| shikimate kinase [Rhodococcus equi ATCC 33707]
gi|325556436|gb|EGD26102.1| shikimate kinase [Rhodococcus equi ATCC 33707]
Length=184
Score = 206 bits (525), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 106/166 (64%), Positives = 129/166 (78%), Gaps = 0/166 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
M P+AVL+G PG+GKSTIGRRLA+AL + LLDTDV IE+RTGR+I +IFATDGE FR I
Sbjct 1 MTPRAVLIGPPGAGKSTIGRRLAQALDLELLDTDVEIERRTGRTIPEIFATDGEPHFREI 60
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
EE VV AL HDG+LSLGGGA+ S R LAGHTVVYLEIS AEG++RTG T RPLL
Sbjct 61 EEQVVGEALEKHDGILSLGGGAILSERTRTRLAGHTVVYLEISVAEGLKRTGATTGRPLL 120
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRL 166
G D KY ALM +R PLYR+VAT+R+ T+ R+P VV+ ++++L
Sbjct 121 NGGDPKAKYHALMRRRRPLYRQVATIRMRTDSRSPSRVVQQLVTKL 166
>gi|111024091|ref|YP_707063.1| shikimate kinase [Rhodococcus jostii RHA1]
gi|123045355|sp|Q0S0N1.1|AROK_RHOSR RecName: Full=Shikimate kinase; Short=SK
gi|110823621|gb|ABG98905.1| shikimate kinase [Rhodococcus jostii RHA1]
Length=168
Score = 201 bits (512), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/166 (60%), Positives = 130/166 (79%), Gaps = 0/166 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
MAPKAVLVG PG+GKSTIGRRLA+AL + L DTDVA+E+ GR+IA+IF +GE FR +
Sbjct 1 MAPKAVLVGPPGAGKSTIGRRLAQALDLPLFDTDVAVEEEAGRTIAEIFVQEGEPAFRAL 60
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
EE++VR A+ H+G++SLGGG++ S R L GHTV+YLEIS AEG++RTG NT RPLL
Sbjct 61 EEEIVRKAIESHEGIVSLGGGSILSERTRELLKGHTVIYLEISVAEGLKRTGTNTARPLL 120
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRL 166
AG D +KY LM KR PLYR+VA++R+ T+ R+P VV+ ++++L
Sbjct 121 AGGDPRQKYTELMRKRRPLYRQVASIRIRTDGRSPARVVQQLVAKL 166
>gi|312139557|ref|YP_004006893.1| shikimate kinase arok [Rhodococcus equi 103S]
gi|311888896|emb|CBH48209.1| shikimate kinase AroK [Rhodococcus equi 103S]
Length=179
Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/161 (64%), Positives = 125/161 (78%), Gaps = 0/161 (0%)
Query 6 VLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEEDVV 65
+L+G PG+GKSTIGRRLA+AL + LLDTDV IE+RTGR+I +IFATDGE FR IEE VV
Sbjct 1 MLIGPPGAGKSTIGRRLAQALDLELLDTDVEIERRTGRTIPEIFATDGEPHFREIEEQVV 60
Query 66 RAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLLAGPDR 125
AL HDG+LSLGGGA+ S R LAGHTVVYLEIS AEG++RTG T RPLL G D
Sbjct 61 GEALEKHDGILSLGGGAILSERTRTRLAGHTVVYLEISVAEGLKRTGATTGRPLLNGGDP 120
Query 126 AEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRL 166
KY ALM +R PLYR+VAT+R+ T+ R+P VV+ ++++L
Sbjct 121 KAKYHALMRRRRPLYRQVATIRMRTDSRSPSRVVQQLVTKL 161
>gi|226366331|ref|YP_002784114.1| shikimate kinase [Rhodococcus opacus B4]
gi|226244821|dbj|BAH55169.1| shikimate kinase [Rhodococcus opacus B4]
Length=169
Score = 197 bits (502), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 96/166 (58%), Positives = 129/166 (78%), Gaps = 0/166 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
MAPKAVLVG PG+GKSTIGRRLA+AL + L DTDVA+E+ GR+IA+IF +GE FR +
Sbjct 2 MAPKAVLVGPPGAGKSTIGRRLAQALDLTLFDTDVAVEEEAGRTIAEIFVEEGEPAFRAL 61
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
EE++VR A+ H+G++SLGGG++ S R L GHTV+YLEIS AEG++RTG NT RPLL
Sbjct 62 EEEIVRKAIESHEGIVSLGGGSILSERTRELLKGHTVIYLEISVAEGLKRTGTNTARPLL 121
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRL 166
+G D + Y LM KR PLYR+VA++R+ T+ R+P VV+ ++++L
Sbjct 122 SGGDPRQVYTELMRKRRPLYRQVASIRIRTDGRSPARVVQQLVAKL 167
>gi|317508443|ref|ZP_07966113.1| shikimate kinase [Segniliparus rugosus ATCC BAA-974]
gi|316253290|gb|EFV12690.1| shikimate kinase [Segniliparus rugosus ATCC BAA-974]
Length=188
Score = 192 bits (487), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/166 (58%), Positives = 127/166 (77%), Gaps = 0/166 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
M P+AVL+G PG GKS IGRRL++ALGV +LDTD IE++ G++I +IFAT+GE FR +
Sbjct 1 MPPRAVLIGAPGCGKSVIGRRLSRALGVKVLDTDAEIERQAGKTITEIFATEGEPAFRAL 60
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
EE+VV AALA+H+G+LSLGGGAV S + AL GHTVV+L+ISAAEGVRRT T RP+L
Sbjct 61 EEEVVAAALAEHEGILSLGGGAVLSERTQEALRGHTVVWLQISAAEGVRRTSRRTHRPIL 120
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRL 166
AG + E+YR L+++R P+YR +AT+RV R ++VR + RL
Sbjct 121 AGENPDERYRQLLSERTPIYRSLATLRVRAEGRPTSSIVRELERRL 166
>gi|296394328|ref|YP_003659212.1| shikimate kinase [Segniliparus rotundus DSM 44985]
gi|296181475|gb|ADG98381.1| Shikimate kinase [Segniliparus rotundus DSM 44985]
Length=177
Score = 191 bits (486), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 98/172 (57%), Positives = 125/172 (73%), Gaps = 0/172 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
M P AVL+G PG GKS IGRRLA+ALGV +LD D IE+ G+SI +IFA +GE FR +
Sbjct 1 MPPLAVLIGAPGCGKSVIGRRLARALGVKVLDADAEIERAAGKSITEIFAQEGEPAFRAL 60
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
EE +V ALA+HDGV+SLGGGAV SP + AL GHTVV+L+ISAAEGVRRT T RP+L
Sbjct 61 EEHIVATALAEHDGVVSLGGGAVLSPKTQEALRGHTVVWLQISAAEGVRRTARRTHRPIL 120
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVPSPS 172
AG + E+YR L+A+R P+YR +AT+RV R ++VR + RL +P+
Sbjct 121 AGENSDERYRKLLAERTPIYRSLATLRVRAEGRPTSSIVRELERRLNRKAPT 172
>gi|229493442|ref|ZP_04387227.1| shikimate kinase [Rhodococcus erythropolis SK121]
gi|229319403|gb|EEN85239.1| shikimate kinase [Rhodococcus erythropolis SK121]
Length=169
Score = 181 bits (458), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/167 (62%), Positives = 124/167 (75%), Gaps = 0/167 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
M PKAVL+G PG+GKSTIGRRLA+AL + L+DTD IE+ TGR+I +IF DGE FR I
Sbjct 1 MKPKAVLIGPPGAGKSTIGRRLAQALELELVDTDAEIERTTGRTIPEIFTHDGEPRFREI 60
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
EE VVR AL DG++SLGGGA+ S R L GHTV+YLEIS AEG+RRTG N RPLL
Sbjct 61 EESVVREALQSTDGIVSLGGGAILSDRTRELLQGHTVIYLEISVAEGLRRTGANNHRPLL 120
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQ 167
AG D KY+ LM +R PLYRR AT+R+ T+ R+P VV ++S+LQ
Sbjct 121 AGGDPKVKYQELMRRRRPLYRRSATIRIRTDGRSPARVVGQLVSKLQ 167
>gi|226306479|ref|YP_002766439.1| shikimate kinase [Rhodococcus erythropolis PR4]
gi|259585302|sp|C0ZZB5.1|AROK_RHOE4 RecName: Full=Shikimate kinase; Short=SK
gi|226185596|dbj|BAH33700.1| shikimate kinase [Rhodococcus erythropolis PR4]
Length=169
Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/167 (62%), Positives = 124/167 (75%), Gaps = 0/167 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
M PKAVL+G PG+GKSTIGRRLA+AL + L+DTD IE+ TGR+I +IF DGE FR I
Sbjct 1 MKPKAVLIGPPGAGKSTIGRRLAQALELELVDTDAEIERTTGRTIPEIFTHDGEPRFREI 60
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
EE VVR AL DG++SLGGGA+ S R L GHTV+YLEIS AEG+RRTG N RPLL
Sbjct 61 EESVVRDALQATDGIVSLGGGAILSDRTRELLQGHTVIYLEISVAEGLRRTGANNHRPLL 120
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQ 167
AG D KY+ LM +R PLYRR AT+R+ T+ R+P VV ++S+LQ
Sbjct 121 AGGDPKVKYQELMRRRRPLYRRSATIRIRTDGRSPARVVGQLVSKLQ 167
>gi|54025606|ref|YP_119848.1| shikimate kinase [Nocardia farcinica IFM 10152]
gi|54017114|dbj|BAD58484.1| putative shikimate kinase [Nocardia farcinica IFM 10152]
Length=493
Score = 177 bits (449), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 106/167 (64%), Positives = 122/167 (74%), Gaps = 0/167 (0%)
Query 2 APKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIE 61
AP+ VLVG PG+GKSTIGR+LAK LGV L DTD IE+ TGR+I +IFA DGE EFRRIE
Sbjct 9 APRVVLVGPPGAGKSTIGRKLAKELGVDLYDTDAGIERETGRTIPEIFAADGEPEFRRIE 68
Query 62 EDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLLA 121
E VVR A+ GV+SLGGGAV S RA L TVVYLEIS AEG+RRTG + RPLL
Sbjct 69 ERVVRRAILAERGVVSLGGGAVLSANTRALLRNRTVVYLEISVAEGLRRTGASNQRPLLN 128
Query 122 GPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQV 168
G D KYR LM R PLYR VAT+RV T+ R+P VVR IL++L +
Sbjct 129 GDDPGAKYRELMRTRRPLYREVATVRVRTDGRSPSRVVRMILTKLGI 175
>gi|296140316|ref|YP_003647559.1| shikimate kinase [Tsukamurella paurometabola DSM 20162]
gi|296028450|gb|ADG79220.1| Shikimate kinase [Tsukamurella paurometabola DSM 20162]
Length=206
Score = 174 bits (442), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 98/171 (58%), Positives = 117/171 (69%), Gaps = 2/171 (1%)
Query 3 PKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEE 62
P A+L+G PG+GK+TIGRRLAK L V LD D IE+R GR+I IFA DGE FR IEE
Sbjct 12 PAAILIGPPGAGKTTIGRRLAKVLRVDFLDIDEEIERREGRTIPQIFAGDGEPAFRAIEE 71
Query 63 DVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNT--VRPLL 120
VV +A H GV+SLGGGAV S R L H VVYLE++A EG+RRT T RPLL
Sbjct 72 AVVADVVATHPGVVSLGGGAVLSETTRELLRRHQVVYLELTAEEGIRRTVSPTASARPLL 131
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVPSP 171
G D A YRALMA+R P+YR +AT+RV T R PG+VVR + RL+ +P
Sbjct 132 KGDDPAAAYRALMARRTPIYRELATIRVSTVGRAPGSVVRQVQRRLKDTAP 182
>gi|300784640|ref|YP_003764931.1| shikimate kinase [Amycolatopsis mediterranei U32]
gi|299794154|gb|ADJ44529.1| shikimate kinase [Amycolatopsis mediterranei U32]
gi|340526063|gb|AEK41268.1| shikimate kinase [Amycolatopsis mediterranei S699]
Length=175
Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/170 (53%), Positives = 120/170 (71%), Gaps = 0/170 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
+ P+AV+VG PGSGKST+G LA ALGV D+D + R GRSI+DIFA DGE FR +
Sbjct 2 VTPRAVIVGPPGSGKSTVGPLLAAALGVEFRDSDDDVVARAGRSISDIFAEDGEAAFRAL 61
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
EE+ V ALA+HDGVL+LGGGA +PG RA LA HTVV+L + A GV+RTG ++ RPLL
Sbjct 62 EEEAVATALAEHDGVLALGGGAPLTPGTRARLAEHTVVFLGVGLAAGVQRTGLSSARPLL 121
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVPS 170
AG + ++ L+ +R P+YR VAT+ + T+ R P +V +++ L VP+
Sbjct 122 AGVNPRATFKKLLDERVPVYREVATVEIVTDDRTPSEIVAQLVAELAVPA 171
>gi|213966135|ref|ZP_03394322.1| shikimate kinase [Corynebacterium amycolatum SK46]
gi|213951233|gb|EEB62628.1| shikimate kinase [Corynebacterium amycolatum SK46]
Length=202
Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/164 (57%), Positives = 108/164 (66%), Gaps = 1/164 (0%)
Query 3 PKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEE 62
P VLVG PGSGKSTIGRRL++AL L DTD IEQR G++ ++F+ GE EFRRIEE
Sbjct 33 PTIVLVGPPGSGKSTIGRRLSRALSTRLTDTDEMIEQRMGKTCGEVFSELGEPEFRRIEE 92
Query 63 DVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLLAG 122
VV AL HDG++SLGGGAV S R LA H VVYLEIS +EGVRRT GN RP+L
Sbjct 93 QVVAEALT-HDGIVSLGGGAVISQATRDLLADHNVVYLEISISEGVRRTAGNNSRPVLQA 151
Query 123 PDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRL 166
D YRAL R Y AT +V ++ R+P VV ILS L
Sbjct 152 DDPEAHYRALYEARRAFYEDAATFKVRSDERSPQRVVAEILSYL 195
>gi|257055575|ref|YP_003133407.1| shikimate kinase [Saccharomonospora viridis DSM 43017]
gi|256585447|gb|ACU96580.1| shikimate kinase [Saccharomonospora viridis DSM 43017]
Length=180
Score = 167 bits (423), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 90/162 (56%), Positives = 112/162 (70%), Gaps = 0/162 (0%)
Query 6 VLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEEDVV 65
V+VG PGSGKST+GR LA+ LGV D D IE GR+I+DIFATDGE FR +EE V
Sbjct 11 VVVGPPGSGKSTVGRLLAERLGVDFHDADADIENEQGRTISDIFATDGEPAFRAMEEVAV 70
Query 66 RAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLLAGPDR 125
L ++ GV +LGGGAVTS R L+GHTVV+L ++ AEGVRRTG +T RPLLAG +
Sbjct 71 DRGLREYTGVFALGGGAVTSEVTRDRLSGHTVVFLNVNVAEGVRRTGLSTARPLLAGVNP 130
Query 126 AEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQ 167
YR L+ R PLYR+VA + VDT+ R+P VV I++ L
Sbjct 131 RATYRTLLETRLPLYRQVADVEVDTSSRSPDEVVDEIVANLS 172
>gi|319950551|ref|ZP_08024461.1| shikimate kinase [Dietzia cinnamea P4]
gi|319435801|gb|EFV91011.1| shikimate kinase [Dietzia cinnamea P4]
Length=184
Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/169 (57%), Positives = 114/169 (68%), Gaps = 1/169 (0%)
Query 3 PKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEE 62
P AVLVG PG+GK+TIGR+LA+ L + LD D IE+ GRSI +IFA+DGE FR IEE
Sbjct 7 PVAVLVGPPGAGKTTIGRKLARRLELPFLDADHLIEEAEGRSIPEIFASDGEPAFREIEE 66
Query 63 DVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLLAG 122
++ AL DGVLSLGGGAV SP R L GH VV+L I AEGVRR+ G RPLL+G
Sbjct 67 RIIGEALTSFDGVLSLGGGAVLSPVTRERLRGHRVVHLTIGVAEGVRRSQGPG-RPLLSG 125
Query 123 PDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVPSP 171
D +Y+AL+ +RAPLYR VA V T RR+ G VV I+ RL P
Sbjct 126 GDVTARYQALLTERAPLYREVAWTTVSTERRSSGKVVSDIVDRLDSGDP 174
>gi|25028297|ref|NP_738351.1| shikimate kinase [Corynebacterium efficiens YS-314]
gi|38604881|sp|Q8FT30.1|AROK_COREF RecName: Full=Shikimate kinase; Short=SK
gi|23493581|dbj|BAC18551.1| shikimate kinase [Corynebacterium efficiens YS-314]
Length=169
Score = 160 bits (405), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 85/165 (52%), Positives = 109/165 (67%), Gaps = 1/165 (0%)
Query 3 PKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEE 62
P VLVG PG+GKSTIGRRLA+AL L+D+D IE+ TG++ ++F+ GE FR +E
Sbjct 4 PIVVLVGPPGAGKSTIGRRLARALNADLVDSDELIEKATGKACGEVFSELGEPAFRELEA 63
Query 63 DVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLLAG 122
V AL +HDGV+SLGGGA+ + R L H VV++++S AEGVRRT G RP+LA
Sbjct 64 HHVAEAL-NHDGVVSLGGGAILTESTRELLREHDVVWIDVSVAEGVRRTAGERTRPVLAA 122
Query 123 PDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQ 167
D E YR L+ R PLY V+T RV TN R+P VV IL L+
Sbjct 123 DDPVEHYRNLLETRRPLYEEVSTFRVRTNSRSPQQVVAEILHHLE 167
>gi|331697323|ref|YP_004333562.1| Shikimate kinase [Pseudonocardia dioxanivorans CB1190]
gi|326952012|gb|AEA25709.1| Shikimate kinase [Pseudonocardia dioxanivorans CB1190]
Length=206
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/172 (52%), Positives = 115/172 (67%), Gaps = 2/172 (1%)
Query 3 PKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEE 62
P V VG PGSGKST+G+ +A+ LGV D D IE+R G+SIADIF DGE FR +E
Sbjct 6 PSVVFVGPPGSGKSTVGKVVARRLGVAFTDADALIEERAGKSIADIFTEDGEDAFRALER 65
Query 63 DVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLLAG 122
+VV ALA GVL+LGGGAV + RAAL GH VV L ++ A+G+RRTG +T RPLLAG
Sbjct 66 EVVADALARDCGVLALGGGAVLAAETRAALRGHRVVALSVTLADGMRRTGMSTARPLLAG 125
Query 123 PDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRL--QVPSPS 172
+ ++AL+ RAPLY VAT+ V+T +R+ V +L+ L VP P+
Sbjct 126 VNPRATFKALLDARAPLYAEVATVTVETAKRSANQVATAVLAALGESVPEPA 177
>gi|256379261|ref|YP_003102921.1| shikimate kinase [Actinosynnema mirum DSM 43827]
gi|255923564|gb|ACU39075.1| Shikimate kinase [Actinosynnema mirum DSM 43827]
Length=171
Score = 158 bits (399), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/164 (52%), Positives = 111/164 (68%), Gaps = 0/164 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
M+P+ V++G PG GK+T+G LA+ LGVG DTD I + G+ I+DIF TDGE FR +
Sbjct 1 MSPRFVVLGPPGGGKTTVGVLLAEHLGVGFRDTDDDIVESQGKPISDIFTTDGEPVFRAL 60
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
EE V AL++++GVLSLGGGA+ S R LA HTVV+L + AEGVRRTG ++ RPLL
Sbjct 61 EEAAVAKALSEYEGVLSLGGGAILSERTRELLADHTVVFLNVGMAEGVRRTGLSSARPLL 120
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILS 164
AG + Y+AL+ R PLYR VA + V T+ P VV IL+
Sbjct 121 AGVNPRATYKALLEARLPLYREVAKIEVLTDALTPEQVVSTILT 164
>gi|237785592|ref|YP_002906297.1| Shikimate kinase [Corynebacterium kroppenstedtii DSM 44385]
gi|237758504|gb|ACR17754.1| Shikimate kinase [Corynebacterium kroppenstedtii DSM 44385]
Length=191
Score = 158 bits (399), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 116/168 (70%), Gaps = 2/168 (1%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTG-RSIADIFATDGEQEFRR 59
M P+ VL+GLPG+GKSTIGRRL++ALG+ L+D+D IEQR G + I+ GE++FR
Sbjct 1 MKPRVVLIGLPGAGKSTIGRRLSRALGLDLVDSDELIEQRWGGMTCGRIYDHLGEEQFRL 60
Query 60 IEEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPL 119
+EEDV+ AL G+++LGGGA+ S R L GH VV+L++SA EG RRT G+ RP+
Sbjct 61 VEEDVIADALT-TGGIVALGGGAIVSSVTRRRLVGHEVVFLDVSAEEGYRRTRGSLTRPV 119
Query 120 LAGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQ 167
L D ++YR L +R PLY VAT+R+ ++RR P VV IL+ L+
Sbjct 120 LQSEDPEQRYRDLDEQRRPLYEEVATLRIRSDRRGPQKVVATILNYLE 167
>gi|302525855|ref|ZP_07278197.1| shikimate kinase [Streptomyces sp. AA4]
gi|302434750|gb|EFL06566.1| shikimate kinase [Streptomyces sp. AA4]
Length=174
Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/155 (58%), Positives = 116/155 (75%), Gaps = 0/155 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
M+P+AV++G PGSGKST+G LA ALGV DTD I R GR+I+DIFA DGE FR +
Sbjct 1 MSPRAVVIGPPGSGKSTVGPLLAAALGVTFRDTDDDIVARAGRAISDIFADDGEPAFRAL 60
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
EE+ V AALA+HDGVLSLGGGA +PG RA L GHTVV+L + A GV+RTG ++ RPLL
Sbjct 61 EEEAVAAALAEHDGVLSLGGGAPLTPGTRARLQGHTVVFLNVGLAAGVQRTGMSSARPLL 120
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNP 155
AG + ++AL+ +R P+YR VAT+ ++T++R P
Sbjct 121 AGINPRATFKALLDQRLPVYREVATVEIETDKRTP 155
>gi|72161495|ref|YP_289152.1| shikimate kinase [Thermobifida fusca YX]
gi|124053407|sp|Q47QY8.1|AROK_THEFY RecName: Full=Shikimate kinase; Short=SK
gi|71915227|gb|AAZ55129.1| shikimate kinase [Thermobifida fusca YX]
Length=172
Score = 157 bits (397), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/153 (53%), Positives = 110/153 (72%), Gaps = 1/153 (0%)
Query 3 PKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEE 62
P AVL+G PG+GK+T+GR LA+ LGV LLDTD IE+R G++++DIF DGE+ FR +E
Sbjct 5 PLAVLIGSPGAGKTTVGRALAERLGVDLLDTDAEIERRAGKTVSDIFVEDGEEAFRALER 64
Query 63 DVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLLAG 122
+VV ALA H GV++LGGGA+ + RA LAGH VVYLE+ A+ +R G +T RPLL G
Sbjct 65 EVVAEALASHPGVVALGGGAILNEQTRADLAGHRVVYLEVEFADAAKRVGLDTARPLLLG 124
Query 123 PDRAEKYRALMAKRAPLYRRVATMRVDTNRRNP 155
RA + +AL+ +R P+Y+ +AT+ V T+ P
Sbjct 125 NPRA-RLKALLRERLPIYQSLATLTVSTSEHTP 156
>gi|134098636|ref|YP_001104297.1| shikimate kinase I [Saccharopolyspora erythraea NRRL 2338]
gi|291003678|ref|ZP_06561651.1| shikimate kinase I [Saccharopolyspora erythraea NRRL 2338]
gi|226729540|sp|A4FBE7.1|AROK_SACEN RecName: Full=Shikimate kinase; Short=SK
gi|133911259|emb|CAM01372.1| shikimate kinase I [Saccharopolyspora erythraea NRRL 2338]
Length=175
Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/166 (53%), Positives = 112/166 (68%), Gaps = 0/166 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
M+P AV+VG PG+GK+T+GR LA+ LGV DTD + + G+ IA+IF DGE FR +
Sbjct 1 MSPCAVVVGPPGAGKTTVGRLLAERLGVAFRDTDDDVVRVAGKPIAEIFTGDGEPVFRAM 60
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
EE V AALA+HDGVLSLGGG+V S RA LA VV+L + AEG RRTG +T RPLL
Sbjct 61 EERAVAAALAEHDGVLSLGGGSVLSERTRALLAEQPVVFLSVGLAEGARRTGLSTARPLL 120
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRL 166
AG + ++AL+ R PLYR VAT + T+ P A+V I+ R+
Sbjct 121 AGVNPRATFKALLDARLPLYREVATWELATDGVEPDALVDRIVERV 166
>gi|300858561|ref|YP_003783544.1| shikimate kinase [Corynebacterium pseudotuberculosis FRC41]
gi|300686015|gb|ADK28937.1| Shikimate kinase [Corynebacterium pseudotuberculosis FRC41]
gi|302206273|gb|ADL10615.1| Shikimate kinase [Corynebacterium pseudotuberculosis C231]
gi|302330831|gb|ADL21025.1| Shikimate kinase [Corynebacterium pseudotuberculosis 1002]
gi|308276515|gb|ADO26414.1| Shikimate kinase [Corynebacterium pseudotuberculosis I19]
gi|341824956|gb|AEK92477.1| Shikimate kinase [Corynebacterium pseudotuberculosis PAT10]
Length=198
Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/167 (50%), Positives = 105/167 (63%), Gaps = 1/167 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
M P VLVG PG+GK+T+G+RLA AL +DTD IEQ TG+S +F+ GE EFR++
Sbjct 28 MHPLVVLVGPPGAGKTTVGKRLANALHTNFVDTDALIEQSTGQSCGAVFSKIGEPEFRKL 87
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
EE VR AL GV+SLGGGAV SP R L GHTV+++++ EG +RTG + RP+L
Sbjct 88 EESKVREALGT-SGVVSLGGGAVLSPLTRNLLLGHTVIWIDVDPEEGAQRTGADNSRPIL 146
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQ 167
D YR L+ R PLYR V+ R +T R P VV IL L+
Sbjct 147 QAQDPIAHYRELVETRRPLYREVSRHRSNTTGRGPQRVVSDILGYLE 193
>gi|117928515|ref|YP_873066.1| shikimate kinase [Acidothermus cellulolyticus 11B]
gi|166219234|sp|A0LUH0.1|AROK_ACIC1 RecName: Full=Shikimate kinase; Short=SK
gi|117648978|gb|ABK53080.1| shikimate kinase [Acidothermus cellulolyticus 11B]
Length=172
Score = 154 bits (389), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/168 (53%), Positives = 106/168 (64%), Gaps = 1/168 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
M P VL+G PG+GKST+GR LA L V DTD IEQR G+ IA+IF TDGE FR++
Sbjct 1 MPPVVVLIGPPGAGKSTVGRALASRLAVSFEDTDDVIEQRAGKRIAEIFLTDGEAAFRQL 60
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
E+ VV LA H GVL+LGGGA+ RA LA HTV+YLE+ +E VRR G N RPLL
Sbjct 61 EKAVVADRLAAHTGVLALGGGAILDDDTRALLADHTVIYLEVEFSEAVRRVGLNRDRPLL 120
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQV 168
G RA + RALM R PLY + AT V T R P V I + + V
Sbjct 121 LGNPRA-QLRALMDARRPLYEQTATHTVGTTGRTPDEVADEIAALITV 167
>gi|269127162|ref|YP_003300532.1| Shikimate kinase [Thermomonospora curvata DSM 43183]
gi|268312120|gb|ACY98494.1| Shikimate kinase [Thermomonospora curvata DSM 43183]
Length=171
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/169 (48%), Positives = 111/169 (66%), Gaps = 1/169 (0%)
Query 3 PKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEE 62
P+AVL+G PGSGK+T+GR LA LG DTD +E G+ I++IF DGE+ FR +E
Sbjct 4 PRAVLIGPPGSGKTTVGRALADRLGAAFRDTDADVEATAGKPISEIFIDDGEERFRALER 63
Query 63 DVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLLAG 122
+ V AALA+H+GVL+LGGGA+ G + LAGHTVVYL++ +E V+R G RPLL
Sbjct 64 EAVAAALAEHEGVLALGGGAILDAGTQRLLAGHTVVYLQVGLSEAVKRVGLGAARPLLVL 123
Query 123 PDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVPSP 171
R+ + R LM +R P+Y R+AT+ VDT+ R VV + + L +P
Sbjct 124 NPRS-QLRKLMEQRRPIYERLATITVDTDGRETAEVVDELAAALTEEAP 171
>gi|337290865|ref|YP_004629886.1| Shikimate kinase [Corynebacterium ulcerans BR-AD22]
gi|334699171|gb|AEG83967.1| Shikimate kinase [Corynebacterium ulcerans BR-AD22]
Length=198
Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/165 (50%), Positives = 106/165 (65%), Gaps = 1/165 (0%)
Query 3 PKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEE 62
P AVLVG PG+GK+T+G+RLA AL +DTD IEQ G+ IF+ GE EFR++EE
Sbjct 30 PLAVLVGPPGAGKTTVGKRLANALHTTFVDTDALIEQSAGQPCGVIFSQMGEPEFRKLEE 89
Query 63 DVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLLAG 122
+ VR AL GV+SLGGGAV SP R+ L GHTV++++++ EG +RTG + RP+L
Sbjct 90 NKVREALGT-SGVVSLGGGAVLSPLTRSLLLGHTVIWIDVNPEEGAKRTGADNSRPILQS 148
Query 123 PDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQ 167
D YR L+ R PLYR V+ R +T R P VV IL L+
Sbjct 149 QDPIAHYRELVESRRPLYREVSRHRSNTTGRGPQRVVADILGYLE 193
>gi|334696979|gb|AEG81776.1| Shikimate kinase [Corynebacterium ulcerans 809]
Length=198
Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/165 (50%), Positives = 106/165 (65%), Gaps = 1/165 (0%)
Query 3 PKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEE 62
P AVLVG PG+GK+T+G+RLA AL +DTD IEQ G+ IF+ GE EFR++EE
Sbjct 30 PLAVLVGPPGAGKTTVGKRLANALHTTFVDTDALIEQSAGQPCGVIFSQMGEPEFRKLEE 89
Query 63 DVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLLAG 122
+ VR AL GV+SLGGGAV SP R+ L GHTV++++++ EG +RTG + RP+L
Sbjct 90 NKVREALGT-SGVVSLGGGAVLSPLTRSLLLGHTVIWIDVNPEEGAKRTGADNSRPILQS 148
Query 123 PDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQ 167
D YR L+ R PLYR V+ R +T R P VV IL L+
Sbjct 149 QDPIAHYRELVESRRPLYREVSRHRSNTTGRGPQRVVADILGYLE 193
>gi|337769303|emb|CCB78016.1| Shikimate kinase [Streptomyces cattleya NRRL 8057]
Length=194
Score = 150 bits (379), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/170 (53%), Positives = 107/170 (63%), Gaps = 1/170 (0%)
Query 3 PKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEE 62
P VLVG PG+GKST+GR LA LGVG DTD IE GR I DIF DGE+ FR +E
Sbjct 14 PAVVLVGPPGAGKSTVGRVLAARLGVGYRDTDADIEATAGRPIPDIFVEDGEEHFRALER 73
Query 63 DVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLLAG 122
VR ALA H GVL+LGGGAV RAALAG VV+L++ A+ VRR G + RPLLA
Sbjct 74 AAVRDALAAHPGVLALGGGAVLDDSTRAALAGLPVVFLDVGLADAVRRVGLDAPRPLLAV 133
Query 123 PDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVPSPS 172
RA ++R LM +R PLY VA V T+ R P V +L+ L P+P
Sbjct 134 NPRA-RWRELMEQRRPLYTEVARAVVVTDGRTPEEVAEAVLAALGRPAPQ 182
>gi|334337117|ref|YP_004542269.1| Shikimate kinase [Isoptericola variabilis 225]
gi|334107485|gb|AEG44375.1| Shikimate kinase [Isoptericola variabilis 225]
Length=179
Score = 150 bits (378), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 82/171 (48%), Positives = 110/171 (65%), Gaps = 6/171 (3%)
Query 2 APKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIE 61
AP VLVG PGSGK+T+GR +A+ LGVG DTD +EQ G+++AD+F DGE FR +E
Sbjct 5 APAVVLVGPPGSGKTTVGRLVAQHLGVGFRDTDTDVEQVAGKAVADVFVEDGEPRFRELE 64
Query 62 EDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHT-----VVYLEISAAEGVRRTGGNTV 116
+ V ALA+HDGVL+LGGGAV P + AL G+T VV+L++S A R G N
Sbjct 65 REAVTTALAEHDGVLALGGGAVMDPLTQGALEGYTAAGGVVVFLDVSLAHAAPRVGFNQS 124
Query 117 RPLLAGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQ 167
RPLL G RA ++ LM +R P Y R+AT+RV ++ R+ V + +Q
Sbjct 125 RPLLVGNPRA-RWAELMERRRPTYERLATVRVLSDGRSAKDVAAEVYQEVQ 174
>gi|145295744|ref|YP_001138565.1| shikimate kinase [Corynebacterium glutamicum R]
gi|140845664|dbj|BAF54663.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344044931|gb|EGV40605.1| shikimate kinase [Corynebacterium glutamicum S9114]
Length=190
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/167 (48%), Positives = 105/167 (63%), Gaps = 1/167 (0%)
Query 2 APKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIE 61
P VLVGLPG+GKSTIGRRLA+AL L+D+D IE+ TG++ +F+ GE FR +E
Sbjct 24 CPIVVLVGLPGAGKSTIGRRLARALNTELVDSDELIERATGKACGAVFSELGEPAFRELE 83
Query 62 EDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLLA 121
V AL GV+SLGGG+V + R L GH VV++++ EG+RRT RP+L
Sbjct 84 AIHVAEALKS-SGVVSLGGGSVLTESTRELLKGHDVVWIDVPVEEGIRRTANERSRPVLQ 142
Query 122 GPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQV 168
D AE YR L+ R PLY VAT R+ TN R+P VV +L L++
Sbjct 143 AADPAEHYRNLVKVRTPLYEEVATYRLRTNNRSPQQVVAAVLHHLEI 189
>gi|271967794|ref|YP_003341990.1| shikimate kinase [Streptosporangium roseum DSM 43021]
gi|270510969|gb|ACZ89247.1| Shikimate kinase [Streptosporangium roseum DSM 43021]
Length=167
Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/166 (49%), Positives = 105/166 (64%), Gaps = 1/166 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
M+P+ VL+G PGSGKST+GR LA LG DTD +E G+ + DIF DGE+ FR +
Sbjct 1 MSPRVVLIGPPGSGKSTVGRLLADRLGAAFRDTDTDVEVVAGKPVGDIFVEDGEERFREL 60
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
E VR ALA+HDGVLSLGGGAV + R LAGH VVYLE+ ++ V+R G + RPLL
Sbjct 61 EAAAVRLALAEHDGVLSLGGGAVLAEATRELLAGHPVVYLEVGLSQAVQRVGLASARPLL 120
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRL 166
R++ + LM R P+Y +A + V T+ R P VV I+ L
Sbjct 121 VLNPRSQ-LKKLMDARRPIYEGLAAVVVATDERKPDEVVDEIVKGL 165
>gi|334565067|ref|ZP_08518058.1| shikimate kinase [Corynebacterium bovis DSM 20582]
Length=179
Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/163 (54%), Positives = 106/163 (66%), Gaps = 1/163 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
M+P+AVLVGLPG+GKSTIGRRL+ AL V ++DTD IE G + +IFA GE FR
Sbjct 1 MSPRAVLVGLPGAGKSTIGRRLSHALNVPVVDTDDLIEAAEGMTCGEIFARRGEPYFRDR 60
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
EE VR ALA DG++SLGGG+V S RAALA H VV+L I+ EG+RRT RPLL
Sbjct 61 EESAVRDALAT-DGIVSLGGGSVLSAATRAALADHLVVHLHITPEEGIRRTVAAGGRPLL 119
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHIL 163
PD +YR L +R LY VAT+ V + + P VV IL
Sbjct 120 EAPDPEARYRELADERQHLYEEVATVTVHGDGKEPQRVVTDIL 162
>gi|68536109|ref|YP_250814.1| shikimate kinase [Corynebacterium jeikeium K411]
gi|109939718|sp|Q4JVG1.1|AROK_CORJK RecName: Full=Shikimate kinase; Short=SK
gi|68263708|emb|CAI37196.1| aroK [Corynebacterium jeikeium K411]
Length=185
Score = 147 bits (372), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/167 (50%), Positives = 105/167 (63%), Gaps = 1/167 (0%)
Query 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRI 60
M+P+AVLVGLPGSGK+TIG+RLA AL + L+DTD +E++ G++ I GE FR
Sbjct 1 MSPRAVLVGLPGSGKTTIGKRLANALNLQLVDTDHMLEKKLGKTCNQIMGELGEPAFREQ 60
Query 61 EEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLL 120
E VV AL DG++SLGGGAV + R LA HTVVYL +S EGVRRT G+ RPLL
Sbjct 61 EAIVVAEALQT-DGIVSLGGGAVVTESTRELLADHTVVYLNVSIDEGVRRTSGSNTRPLL 119
Query 121 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQ 167
D KY L A+R+ Y V+ V + + P VV ILS ++
Sbjct 120 NVADPRGKYAQLFAQRSAFYEEVSNFMVRCDGKEPRRVVTDILSFIE 166
Lambda K H
0.318 0.134 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 149040830208
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40