BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2544

Length=220
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15609681|ref|NP_217060.1|  lipoprotein LppB [Mycobacterium tub...   456    8e-127
gi|289444079|ref|ZP_06433823.1|  lipoprotein lppB [Mycobacterium ...   455    2e-126
gi|254232665|ref|ZP_04925992.1|  lipoprotein lppB [Mycobacterium ...   455    3e-126
gi|340627561|ref|YP_004746013.1|  putative lipoprotein LPPB [Myco...   455    3e-126
gi|289448192|ref|ZP_06437936.1|  lipoprotein lppB [Mycobacterium ...   439    1e-121
gi|289754653|ref|ZP_06514031.1|  lipoprotein lppB [Mycobacterium ...   439    2e-121
gi|323718816|gb|EGB27972.1|  lipoprotein lppB [Mycobacterium tube...   415    3e-114
gi|344220371|gb|AEN01002.1|  lipoprotein LppA [Mycobacterium tube...   389    1e-106
gi|15609680|ref|NP_217059.1|  lipoprotein LppA [Mycobacterium tub...   387    6e-106
gi|289758673|ref|ZP_06518051.1|  lipoprotein lppB [Mycobacterium ...   387    8e-106
gi|289754651|ref|ZP_06514029.1|  lipoprotein LppA [Mycobacterium ...   385    2e-105
gi|298526017|ref|ZP_07013426.1|  lipoprotein [Mycobacterium tuber...   385    3e-105
gi|289746336|ref|ZP_06505714.1|  lipoprotein lppB [Mycobacterium ...   384    4e-105
gi|254232664|ref|ZP_04925991.1|  lipoprotein lppA [Mycobacterium ...   384    6e-105
gi|15842079|ref|NP_337116.1|  putative lipoprotein [Mycobacterium...   377    9e-103
gi|289746328|ref|ZP_06505706.1|  lipoprotein lppA [Mycobacterium ...   375    3e-102
gi|340627560|ref|YP_004746012.1|  putative lipoprotein LPPA [Myco...   374    6e-102
gi|340627559|ref|YP_004746011.1|  putative lipoprotein LPPA [Myco...   369    2e-100
gi|308232168|ref|ZP_07415156.2|  hypothetical protein TMAG_02348 ...   361    3e-98 
gi|289570711|ref|ZP_06450938.1|  lipoprotein lppB [Mycobacterium ...   341    5e-92 
gi|197304970|pdb|2V7S|A  Chain A, Crystal Structure Of The Putati...   318    3e-85 
gi|289570707|ref|ZP_06450934.1|  lipoprotein lppA [Mycobacterium ...   241    4e-62 
gi|289762712|ref|ZP_06522090.1|  lipoprotein [Mycobacterium tuber...   221    6e-56 
gi|240171303|ref|ZP_04749962.1|  putative lipoprotein [Mycobacter...  59.3    3e-07 
gi|240171305|ref|ZP_04749964.1|  putative lipoprotein [Mycobacter...  58.2    8e-07 
gi|340627797|ref|YP_004746249.1|  putative lipoprotein LPPV [Myco...  54.3    1e-05 
gi|183981927|ref|YP_001850218.1|  lipoprotein LppV_1 [Mycobacteri...  53.5    2e-05 
gi|240171304|ref|ZP_04749963.1|  lipoprotein LppV_1 [Mycobacteriu...  53.5    2e-05 
gi|240171306|ref|ZP_04749965.1|  putative lipoprotein [Mycobacter...  52.4    4e-05 
gi|118617693|ref|YP_906025.1|  lipoprotein LppV_1 [Mycobacterium ...  52.4    5e-05 
gi|118617694|ref|YP_906026.1|  lipoprotein LppV [Mycobacterium ul...  50.8    1e-04 
gi|317507795|ref|ZP_07965497.1|  hypothetical protein HMPREF9336_...  48.9    5e-04 
gi|31793972|ref|NP_856465.1|  lipoprotein LppV [Mycobacterium bov...  47.8    0.001 
gi|15842334|ref|NP_337371.1|  hypothetical protein MT2865 [Mycoba...  47.8    0.001 
gi|15609933|ref|NP_217312.1|  lipoprotein LppV [Mycobacterium tub...  47.4    0.001 
gi|296393638|ref|YP_003658522.1|  lipoprotein LppV [Segniliparus ...  47.0    0.002 
gi|296393636|ref|YP_003658520.1|  lipoprotein LppV [Segniliparus ...  45.4    0.006 
gi|296392596|ref|YP_003657480.1|  lipoprotein LppV [Segniliparus ...  43.5    0.022 
gi|340627796|ref|YP_004746248.1|  putative lipoprotein LPPV [Myco...  43.1    0.029 
gi|317507794|ref|ZP_07965496.1|  hypothetical protein HMPREF9336_...  43.1    0.031 
gi|339295645|gb|AEJ47756.1|  hypothetical protein CCDC5079_2566 [...  41.6    0.073 
gi|334321122|ref|YP_004557751.1|  MCP methyltransferase/methylest...  40.4    0.18  
gi|296392494|ref|YP_003657378.1|  hypothetical protein Srot_0054 ...  40.0    0.25  
gi|333815786|gb|AEG08453.1|  MCP methyltransferase/methylesterase...  38.9    0.51  
gi|336038014|gb|AEH83944.1|  putative methyltransferase [Sinorhiz...  38.9    0.55  
gi|221134103|ref|ZP_03560408.1|  hypothetical protein GHTCC_04164...  38.1    0.94  
gi|120612396|ref|YP_972074.1|  peptidase M16 domain-containing pr...  37.4    1.5   
gi|16264244|ref|NP_437036.1|  chemotaxis methyltransferase [Sinor...  37.4    1.6   
gi|153001748|ref|YP_001367429.1|  CRISPR-associated Csy1 family p...  36.6    2.8   
gi|160876481|ref|YP_001555797.1|  CRISPR-associated Csy1 family p...  36.6    2.9   


>gi|15609681|ref|NP_217060.1| lipoprotein LppB [Mycobacterium tuberculosis H37Rv]
 gi|15842080|ref|NP_337117.1| putative lipoprotein [Mycobacterium tuberculosis CDC1551]
 gi|31793727|ref|NP_856220.1| lipoprotein LppB [Mycobacterium bovis AF2122/97]
 52 more sequence titles
 Length=220

 Score =  456 bits (1174),  Expect = 8e-127, Method: Compositional matrix adjust.
 Identities = 219/220 (99%), Positives = 220/220 (100%), Gaps = 0/220 (0%)

Query  1    LIAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHK  60
            +IAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHK
Sbjct  1    MIAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHK  60

Query  61   GSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPM  120
            GSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPM
Sbjct  61   GSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPM  120

Query  121  AKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQI  180
            AKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQI
Sbjct  121  AKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQI  180

Query  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP  220
            KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP
Sbjct  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP  220


>gi|289444079|ref|ZP_06433823.1| lipoprotein lppB [Mycobacterium tuberculosis T46]
 gi|289751162|ref|ZP_06510540.1| lipoprotein lppB [Mycobacterium tuberculosis T92]
 gi|289416998|gb|EFD14238.1| lipoprotein lppB [Mycobacterium tuberculosis T46]
 gi|289691749|gb|EFD59178.1| lipoprotein lppB [Mycobacterium tuberculosis T92]
Length=220

 Score =  455 bits (1171),  Expect = 2e-126, Method: Compositional matrix adjust.
 Identities = 218/220 (99%), Positives = 220/220 (100%), Gaps = 0/220 (0%)

Query  1    LIAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHK  60
            +IAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHK
Sbjct  1    MIAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHK  60

Query  61   GSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPM  120
            GSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPM
Sbjct  61   GSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPM  120

Query  121  AKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQI  180
            AKPVDFGSTFSAEDFKIAANI+REEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQI
Sbjct  121  AKPVDFGSTFSAEDFKIAANIMREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQI  180

Query  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP  220
            KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP
Sbjct  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP  220


>gi|254232665|ref|ZP_04925992.1| lipoprotein lppB [Mycobacterium tuberculosis C]
 gi|124601724|gb|EAY60734.1| lipoprotein lppB [Mycobacterium tuberculosis C]
Length=220

 Score =  455 bits (1170),  Expect = 3e-126, Method: Compositional matrix adjust.
 Identities = 218/220 (99%), Positives = 220/220 (100%), Gaps = 0/220 (0%)

Query  1    LIAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHK  60
            +IAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHK
Sbjct  1    MIAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHK  60

Query  61   GSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPM  120
            GSYEAARERLTATA+IIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPM
Sbjct  61   GSYEAARERLTATARIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPM  120

Query  121  AKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQI  180
            AKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQI
Sbjct  121  AKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQI  180

Query  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP  220
            KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP
Sbjct  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP  220


>gi|340627561|ref|YP_004746013.1| putative lipoprotein LPPB [Mycobacterium canettii CIPT 140010059]
 gi|340005751|emb|CCC44917.1| putative conserved lipoprotein LPPB [Mycobacterium canettii CIPT 
140010059]
Length=220

 Score =  455 bits (1170),  Expect = 3e-126, Method: Compositional matrix adjust.
 Identities = 218/220 (99%), Positives = 219/220 (99%), Gaps = 0/220 (0%)

Query  1    LIAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHK  60
            +IAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHK
Sbjct  1    MIAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHK  60

Query  61   GSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPM  120
            GSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPM
Sbjct  61   GSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPM  120

Query  121  AKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQI  180
            AKPVDFGSTFSAEDFKIAANIVREEAAKYG TTESSLFNESAKRDYDVQGNGYEFNLGQI
Sbjct  121  AKPVDFGSTFSAEDFKIAANIVREEAAKYGATTESSLFNESAKRDYDVQGNGYEFNLGQI  180

Query  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP  220
            KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP
Sbjct  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP  220


>gi|289448192|ref|ZP_06437936.1| lipoprotein lppB [Mycobacterium tuberculosis CPHL_A]
 gi|289421150|gb|EFD18351.1| lipoprotein lppB [Mycobacterium tuberculosis CPHL_A]
Length=220

 Score =  439 bits (1129),  Expect = 1e-121, Method: Compositional matrix adjust.
 Identities = 212/220 (97%), Positives = 215/220 (98%), Gaps = 0/220 (0%)

Query  1    LIAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHK  60
            +IAPQPIPRTLPRWQRIVALTMIGISTALIGGCTM Q+PD S  LT EQKIQLIDSMRHK
Sbjct  1    MIAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMDQSPDTSRRLTDEQKIQLIDSMRHK  60

Query  61   GSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPM  120
            GSYEAARERLTATA+IIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPM
Sbjct  61   GSYEAARERLTATARIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPM  120

Query  121  AKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQI  180
            AKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQI
Sbjct  121  AKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQI  180

Query  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP  220
            KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP
Sbjct  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP  220


>gi|289754653|ref|ZP_06514031.1| lipoprotein lppB [Mycobacterium tuberculosis EAS054]
 gi|289754661|ref|ZP_06514039.1| lipoprotein lppB [Mycobacterium tuberculosis EAS054]
 gi|289695240|gb|EFD62669.1| lipoprotein lppB [Mycobacterium tuberculosis EAS054]
 gi|289695248|gb|EFD62677.1| lipoprotein lppB [Mycobacterium tuberculosis EAS054]
Length=219

 Score =  439 bits (1128),  Expect = 2e-121, Method: Compositional matrix adjust.
 Identities = 211/211 (100%), Positives = 211/211 (100%), Gaps = 0/211 (0%)

Query  1    LIAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHK  60
            LIAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHK
Sbjct  9    LIAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHK  68

Query  61   GSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPM  120
            GSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPM
Sbjct  69   GSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPM  128

Query  121  AKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQI  180
            AKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQI
Sbjct  129  AKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQI  188

Query  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPI  211
            KFATLNITGDCFLLQKVLDLPAGQLPPEPPI
Sbjct  189  KFATLNITGDCFLLQKVLDLPAGQLPPEPPI  219


>gi|323718816|gb|EGB27972.1| lipoprotein lppB [Mycobacterium tuberculosis CDC1551A]
Length=199

 Score =  415 bits (1066),  Expect = 3e-114, Method: Compositional matrix adjust.
 Identities = 199/199 (100%), Positives = 199/199 (100%), Gaps = 0/199 (0%)

Query  22   MIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHKGSYEAARERLTATAQIIADRV  81
            MIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHKGSYEAARERLTATAQIIADRV
Sbjct  1    MIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHKGSYEAARERLTATAQIIADRV  60

Query  82   SAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPMAKPVDFGSTFSAEDFKIAANI  141
            SAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPMAKPVDFGSTFSAEDFKIAANI
Sbjct  61   SAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPMAKPVDFGSTFSAEDFKIAANI  120

Query  142  VREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQIKFATLNITGDCFLLQKVLDLP  201
            VREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQIKFATLNITGDCFLLQKVLDLP
Sbjct  121  VREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQIKFATLNITGDCFLLQKVLDLP  180

Query  202  AGQLPPEPPIWPTTSTPTP  220
            AGQLPPEPPIWPTTSTPTP
Sbjct  181  AGQLPPEPPIWPTTSTPTP  199


>gi|344220371|gb|AEN01002.1| lipoprotein LppA [Mycobacterium tuberculosis CTRI-2]
Length=219

 Score =  389 bits (1000),  Expect = 1e-106, Method: Compositional matrix adjust.
 Identities = 191/218 (88%), Positives = 200/218 (92%), Gaps = 0/218 (0%)

Query  1    LIAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHK  60
            +IAPQPI RTLPRWQRIVALTMIGISTALIGGCTM  NPD S  LTGEQKIQLIDSMR+K
Sbjct  1    MIAPQPISRTLPRWQRIVALTMIGISTALIGGCTMDHNPDTSRRLTGEQKIQLIDSMRNK  60

Query  61   GSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPM  120
            GSYEAARERLTATA+IIADRVSAAIPGQTWKF+DD   Q   RNG+LC +L+ADIARRP+
Sbjct  61   GSYEAARERLTATARIIADRVSAAIPGQTWKFDDDPNIQQSDRNGALCDKLTADIARRPI  120

Query  121  AKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQI  180
            A  V FG+TFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGYEF L QI
Sbjct  121  ANSVMFGATFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFRLLQI  180

Query  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTP  218
            KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTP
Sbjct  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTP  218


>gi|15609680|ref|NP_217059.1| lipoprotein LppA [Mycobacterium tuberculosis H37Rv]
 gi|15842078|ref|NP_337115.1| putative lipoprotein [Mycobacterium tuberculosis CDC1551]
 gi|31793725|ref|NP_856218.1| lipoprotein LppA [Mycobacterium bovis AF2122/97]
 64 more sequence titles
 Length=219

 Score =  387 bits (994),  Expect = 6e-106, Method: Compositional matrix adjust.
 Identities = 190/218 (88%), Positives = 199/218 (92%), Gaps = 0/218 (0%)

Query  1    LIAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHK  60
            +IAPQPI RTLPRWQRIVALTMIGISTALIGGCTM  NPD S  LTGEQKIQLIDSMR+K
Sbjct  1    MIAPQPISRTLPRWQRIVALTMIGISTALIGGCTMDHNPDTSRRLTGEQKIQLIDSMRNK  60

Query  61   GSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPM  120
            GSYEAARERLTATA+IIADRVSAAIPGQTWKF+DD   Q   RNG+LC +L+ADIARRP+
Sbjct  61   GSYEAARERLTATARIIADRVSAAIPGQTWKFDDDPNIQQSDRNGALCDKLTADIARRPI  120

Query  121  AKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQI  180
            A  V FG+TFSAEDFKIAANIVREEAAKYG TTESSLFNESAKRDYDVQGNGYEF L QI
Sbjct  121  ANSVMFGATFSAEDFKIAANIVREEAAKYGATTESSLFNESAKRDYDVQGNGYEFRLLQI  180

Query  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTP  218
            KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTP
Sbjct  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTP  218


>gi|289758673|ref|ZP_06518051.1| lipoprotein lppB [Mycobacterium tuberculosis T85]
 gi|294994346|ref|ZP_06800037.1| putative lipoprotein [Mycobacterium tuberculosis 210]
 gi|289714237|gb|EFD78249.1| lipoprotein lppB [Mycobacterium tuberculosis T85]
 gi|326904159|gb|EGE51092.1| lipoprotein lppB [Mycobacterium tuberculosis W-148]
 gi|339295423|gb|AEJ47534.1| putative lipoprotein lprR [Mycobacterium tuberculosis CCDC5079]
 gi|339299043|gb|AEJ51153.1| putative lipoprotein lprR [Mycobacterium tuberculosis CCDC5180]
Length=220

 Score =  387 bits (993),  Expect = 8e-106, Method: Compositional matrix adjust.
 Identities = 188/220 (86%), Positives = 198/220 (90%), Gaps = 0/220 (0%)

Query  1    LIAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHK  60
            +IAPQPIPRTLPRWQRIVALTMIGISTALIGGCTM Q+PD S  LT EQKIQLIDSMR+K
Sbjct  1    MIAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMDQSPDTSRRLTDEQKIQLIDSMRNK  60

Query  61   GSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPM  120
            GSYEAARERLTATA+IIADRVSAAIPGQTWKF +D  G+   R G  CKEL+ DIARRP+
Sbjct  61   GSYEAARERLTATARIIADRVSAAIPGQTWKFTEDPAGRKADREGLSCKELTGDIARRPI  120

Query  121  AKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQI  180
            A  V FG+ FSAEDFK+  NIVREEAAKYG TTESSLFNESAKRDYDVQGNGYEFNLGQI
Sbjct  121  ADAVIFGTAFSAEDFKVVTNIVREEAAKYGATTESSLFNESAKRDYDVQGNGYEFNLGQI  180

Query  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP  220
            KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP
Sbjct  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP  220


>gi|289754651|ref|ZP_06514029.1| lipoprotein LppA [Mycobacterium tuberculosis EAS054]
 gi|289695238|gb|EFD62667.1| lipoprotein LppA [Mycobacterium tuberculosis EAS054]
Length=219

 Score =  385 bits (990),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 189/218 (87%), Positives = 199/218 (92%), Gaps = 0/218 (0%)

Query  1    LIAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHK  60
            +IAPQPI RTLPRWQRIVALTMIGISTALIGGCTM  NPD S  LTGEQKIQLIDSMR+K
Sbjct  1    MIAPQPISRTLPRWQRIVALTMIGISTALIGGCTMDHNPDTSRRLTGEQKIQLIDSMRNK  60

Query  61   GSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPM  120
            GSYEAARERLTATA+IIADRVSAAIPGQTWKF+DD   Q   RNG+LC +L+ADIARRP+
Sbjct  61   GSYEAARERLTATARIIADRVSAAIPGQTWKFDDDPNIQQSDRNGALCDKLTADIARRPI  120

Query  121  AKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQI  180
            A  V FG+TFSAEDFKIAANIVREEAAKYG TTESSLFNESAKRDYDVQGNGYEF L QI
Sbjct  121  ANSVMFGATFSAEDFKIAANIVREEAAKYGATTESSLFNESAKRDYDVQGNGYEFRLLQI  180

Query  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTP  218
            KFATLNITGDCFLLQKVL+LPAGQLPPEPPIWPTTSTP
Sbjct  181  KFATLNITGDCFLLQKVLELPAGQLPPEPPIWPTTSTP  218


>gi|298526017|ref|ZP_07013426.1| lipoprotein [Mycobacterium tuberculosis 94_M4241A]
 gi|298495811|gb|EFI31105.1| lipoprotein [Mycobacterium tuberculosis 94_M4241A]
Length=220

 Score =  385 bits (988),  Expect = 3e-105, Method: Compositional matrix adjust.
 Identities = 187/220 (85%), Positives = 198/220 (90%), Gaps = 0/220 (0%)

Query  1    LIAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHK  60
            +IAPQPIPRTLPRWQRIVALTMIGISTALIGGCTM Q+PD S  LT EQKIQLIDSMR+K
Sbjct  1    MIAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMDQSPDTSRRLTDEQKIQLIDSMRNK  60

Query  61   GSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPM  120
            GSYEAARERLTATA+IIADRVSAAIPGQTWKF +D  G+   + G  CKEL+ DIARRP+
Sbjct  61   GSYEAARERLTATARIIADRVSAAIPGQTWKFTEDPAGRKADQEGLSCKELTGDIARRPI  120

Query  121  AKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQI  180
            A  V FG+ FSAEDFK+  NIVREEAAKYG TTESSLFNESAKRDYDVQGNGYEFNLGQI
Sbjct  121  ADAVIFGTAFSAEDFKVVTNIVREEAAKYGATTESSLFNESAKRDYDVQGNGYEFNLGQI  180

Query  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP  220
            KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP
Sbjct  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP  220


>gi|289746336|ref|ZP_06505714.1| lipoprotein lppB [Mycobacterium tuberculosis 02_1987]
 gi|289686864|gb|EFD54352.1| lipoprotein lppB [Mycobacterium tuberculosis 02_1987]
Length=220

 Score =  384 bits (987),  Expect = 4e-105, Method: Compositional matrix adjust.
 Identities = 187/220 (85%), Positives = 196/220 (90%), Gaps = 0/220 (0%)

Query  1    LIAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHK  60
            +IAPQPI RTLPRWQRIVALTMIGISTALIGGCTM  NPD S  LT EQKIQLIDSMR+K
Sbjct  1    MIAPQPISRTLPRWQRIVALTMIGISTALIGGCTMDHNPDTSRRLTDEQKIQLIDSMRNK  60

Query  61   GSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPM  120
            GSYEAARERLTATA+IIADRVSAAIPGQTWKF +D  G+   R G  CKEL+ DIARRP+
Sbjct  61   GSYEAARERLTATARIIADRVSAAIPGQTWKFTEDPAGRKADREGLSCKELTGDIARRPI  120

Query  121  AKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQI  180
            A  V FG+ FSAEDFK+  NIVREEAAKYG TTESSLFNESAKRDYDVQGNGYEFNLGQI
Sbjct  121  ADAVIFGTAFSAEDFKVVTNIVREEAAKYGATTESSLFNESAKRDYDVQGNGYEFNLGQI  180

Query  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP  220
            KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP
Sbjct  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP  220


>gi|254232664|ref|ZP_04925991.1| lipoprotein lppA [Mycobacterium tuberculosis C]
 gi|124601723|gb|EAY60733.1| lipoprotein lppA [Mycobacterium tuberculosis C]
Length=219

 Score =  384 bits (985),  Expect = 6e-105, Method: Compositional matrix adjust.
 Identities = 187/218 (86%), Positives = 197/218 (91%), Gaps = 0/218 (0%)

Query  1    LIAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHK  60
            +IAPQPI RTLPRWQRIVALTMIGISTALIGGCTM  NPD S  LTGEQKIQLIDSMR+K
Sbjct  1    MIAPQPISRTLPRWQRIVALTMIGISTALIGGCTMDHNPDTSRRLTGEQKIQLIDSMRNK  60

Query  61   GSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPM  120
            GSYEAARERLTATA+IIADRVSAAIPGQTWKF+DD   Q   RNG+LC +L+ADIARRP+
Sbjct  61   GSYEAARERLTATARIIADRVSAAIPGQTWKFDDDPNIQQSDRNGALCDKLTADIARRPI  120

Query  121  AKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQI  180
            A  V FG+TFSAEDFK+  NIVREEAAKYG TTESSLFNESAKRDYDVQGNGYEF L QI
Sbjct  121  ANSVMFGATFSAEDFKVVTNIVREEAAKYGATTESSLFNESAKRDYDVQGNGYEFRLLQI  180

Query  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTP  218
            KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTP
Sbjct  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTP  218


>gi|15842079|ref|NP_337116.1| putative lipoprotein [Mycobacterium tuberculosis CDC1551]
 gi|31793726|ref|NP_856219.1| lipoprotein LprR [Mycobacterium bovis AF2122/97]
 gi|121638428|ref|YP_978652.1| putative lipoprotein lprR [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 15 more sequence titles
 Length=219

 Score =  377 bits (967),  Expect = 9e-103, Method: Compositional matrix adjust.
 Identities = 184/218 (85%), Positives = 194/218 (89%), Gaps = 0/218 (0%)

Query  1    LIAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHK  60
            +IAPQPIPRTLPRWQRIVALTMIGISTALIGGCTM Q+PD S  LT EQKIQLIDSMR+K
Sbjct  1    MIAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMDQSPDTSRRLTDEQKIQLIDSMRNK  60

Query  61   GSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPM  120
            GSYEAARERLTATA+IIADRVSAAIPGQTWKF +D  G+   R G  CKEL+ DIARRP+
Sbjct  61   GSYEAARERLTATARIIADRVSAAIPGQTWKFTEDPAGRKADREGLSCKELTGDIARRPI  120

Query  121  AKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQI  180
            A  V FG+ FSAEDFK+  NIVREEAAKYG TTESSLFNESAKRDYDVQGNGYEF L QI
Sbjct  121  ADAVIFGTAFSAEDFKVVTNIVREEAAKYGATTESSLFNESAKRDYDVQGNGYEFRLLQI  180

Query  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTP  218
            KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTP
Sbjct  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTP  218


>gi|289746328|ref|ZP_06505706.1| lipoprotein lppA [Mycobacterium tuberculosis 02_1987]
 gi|289758672|ref|ZP_06518050.1| lipoprotein LprR [Mycobacterium tuberculosis T85]
 gi|294994347|ref|ZP_06800038.1| putative lipoprotein [Mycobacterium tuberculosis 210]
 gi|289686856|gb|EFD54344.1| lipoprotein lppA [Mycobacterium tuberculosis 02_1987]
 gi|289714236|gb|EFD78248.1| lipoprotein LprR [Mycobacterium tuberculosis T85]
 gi|326904158|gb|EGE51091.1| lipoprotein lppA [Mycobacterium tuberculosis W-148]
 gi|339295422|gb|AEJ47533.1| putative lipoprotein lprR [Mycobacterium tuberculosis CCDC5079]
 gi|339299042|gb|AEJ51152.1| putative lipoprotein lprR [Mycobacterium tuberculosis CCDC5180]
Length=219

 Score =  375 bits (962),  Expect = 3e-102, Method: Compositional matrix adjust.
 Identities = 183/218 (84%), Positives = 192/218 (89%), Gaps = 0/218 (0%)

Query  1    LIAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHK  60
            +IAPQPI RTLPRWQRIVALTMIGISTALIGGCTM  NPD S  LT EQKIQLIDSMR+K
Sbjct  1    MIAPQPISRTLPRWQRIVALTMIGISTALIGGCTMDHNPDTSRRLTDEQKIQLIDSMRNK  60

Query  61   GSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPM  120
            GSYEAARERLTATA+IIADRVSAAIPGQTWKF +D  G+   R G  CKEL+ DIARRP+
Sbjct  61   GSYEAARERLTATARIIADRVSAAIPGQTWKFTEDPAGRKADREGLSCKELTGDIARRPI  120

Query  121  AKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQI  180
            A  V FG+ FSAEDFK+  NIVREEAAKYG TTESSLFNESAKRDYDVQGNGYEF L QI
Sbjct  121  ADAVIFGTAFSAEDFKVVTNIVREEAAKYGATTESSLFNESAKRDYDVQGNGYEFRLLQI  180

Query  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTP  218
            KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTP
Sbjct  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTP  218


>gi|340627560|ref|YP_004746012.1| putative lipoprotein LPPA [Mycobacterium canettii CIPT 140010059]
 gi|340005750|emb|CCC44916.1| putative conserved lipoprotein LPPA [Mycobacterium canettii CIPT 
140010059]
Length=219

 Score =  374 bits (960),  Expect = 6e-102, Method: Compositional matrix adjust.
 Identities = 181/218 (84%), Positives = 193/218 (89%), Gaps = 0/218 (0%)

Query  1    LIAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHK  60
            +IAPQP+PRTLPRWQRIV LTMIG+STALIGGCTM Q+PD S  LT EQKIQLIDSMR+K
Sbjct  1    MIAPQPVPRTLPRWQRIVTLTMIGLSTALIGGCTMDQSPDTSRRLTDEQKIQLIDSMRNK  60

Query  61   GSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPM  120
            GSYEAARERLTATA+IIADRVSAAIPGQTWKF +D  G+   R G  CKEL+ DIARRP+
Sbjct  61   GSYEAARERLTATARIIADRVSAAIPGQTWKFTEDPAGRKADREGLSCKELTGDIARRPI  120

Query  121  AKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQI  180
            A  V FG+ FSAEDFK+  NIVREEAAKYG TTESSLFNESAKRDYDVQGNGYEF L QI
Sbjct  121  ADAVIFGTAFSAEDFKVVTNIVREEAAKYGATTESSLFNESAKRDYDVQGNGYEFRLLQI  180

Query  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTP  218
            KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTP
Sbjct  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTP  218


>gi|340627559|ref|YP_004746011.1| putative lipoprotein LPPA [Mycobacterium canettii CIPT 140010059]
 gi|340005749|emb|CCC44915.1| putative conserved lipoprotein LPPA [Mycobacterium canettii CIPT 
140010059]
Length=219

 Score =  369 bits (947),  Expect = 2e-100, Method: Compositional matrix adjust.
 Identities = 191/218 (88%), Positives = 200/218 (92%), Gaps = 0/218 (0%)

Query  1    LIAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHK  60
            +IAPQPI RTLPRWQRIVALTMIGISTALIGGCTM  NPD S  LTGEQKIQLIDSMR+K
Sbjct  1    MIAPQPISRTLPRWQRIVALTMIGISTALIGGCTMDHNPDTSRRLTGEQKIQLIDSMRNK  60

Query  61   GSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPM  120
            GSYEAARERLTATA+IIADRVSAAIPGQTWKF+DD   Q   RNG+LC +L+ADIARRP+
Sbjct  61   GSYEAARERLTATARIIADRVSAAIPGQTWKFDDDPNIQQSDRNGALCDKLTADIARRPI  120

Query  121  AKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQI  180
            A  V FG+TFSAEDFKIAANIVREEAAKYG TTESSLFNESAKRDYDVQGNGYEFNLGQI
Sbjct  121  ANSVMFGATFSAEDFKIAANIVREEAAKYGATTESSLFNESAKRDYDVQGNGYEFNLGQI  180

Query  181  KFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTP  218
            KFATLNITGDCFLLQKVLDLP GQLPPEPPIWPTTSTP
Sbjct  181  KFATLNITGDCFLLQKVLDLPPGQLPPEPPIWPTTSTP  218


>gi|308232168|ref|ZP_07415156.2| hypothetical protein TMAG_02348 [Mycobacterium tuberculosis SUMu001]
 gi|308214746|gb|EFO74145.1| hypothetical protein TMAG_02348 [Mycobacterium tuberculosis SUMu001]
Length=248

 Score =  361 bits (927),  Expect = 3e-98, Method: Compositional matrix adjust.
 Identities = 174/177 (99%), Positives = 174/177 (99%), Gaps = 0/177 (0%)

Query  35   MGQNPDKSPHLTGEQKIQLIDSMRHKGSYEAARERLTATAQIIADRVSAAIPGQTWKFND  94
            MGQNPDKSPHLTGEQKIQLIDSMRHKGSYEAARERLTATAQIIADRVSAAIPGQTWKFND
Sbjct  1    MGQNPDKSPHLTGEQKIQLIDSMRHKGSYEAARERLTATAQIIADRVSAAIPGQTWKFND  60

Query  95   DSYGQDFYRNGSLCKELSADIARRPMAKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTE  154
            DSYGQDFYRNGSLCKELSADIARRPMAKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTE
Sbjct  61   DSYGQDFYRNGSLCKELSADIARRPMAKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTE  120

Query  155  SSLFNESAKRDYDVQGNGYEFNLGQIKFATLNITGDCFLLQKVLDLPAGQLPPEPPI  211
            SSLFNESAKRDYDVQGNGYEFNLGQIKFATLNITGDCFLLQKVLDLPAGQLPP  P 
Sbjct  121  SSLFNESAKRDYDVQGNGYEFNLGQIKFATLNITGDCFLLQKVLDLPAGQLPPNHPF  177


>gi|289570711|ref|ZP_06450938.1| lipoprotein lppB [Mycobacterium tuberculosis T17]
 gi|289544465|gb|EFD48113.1| lipoprotein lppB [Mycobacterium tuberculosis T17]
Length=164

 Score =  341 bits (874),  Expect = 5e-92, Method: Compositional matrix adjust.
 Identities = 163/164 (99%), Positives = 164/164 (100%), Gaps = 0/164 (0%)

Query  57   MRHKGSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIA  116
            MRHKGSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIA
Sbjct  1    MRHKGSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIA  60

Query  117  RRPMAKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFN  176
            RRPMAKPVDFGSTFSAEDFKIAANI+REEAAKYGVTTESSLFNESAKRDYDVQGNGYEFN
Sbjct  61   RRPMAKPVDFGSTFSAEDFKIAANIMREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFN  120

Query  177  LGQIKFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP  220
            LGQIKFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP
Sbjct  121  LGQIKFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP  164


>gi|197304970|pdb|2V7S|A Chain A, Crystal Structure Of The Putative Lipoprotein Lppa From 
Mycobacterium Tuberculosis
Length=215

 Score =  318 bits (815),  Expect = 3e-85, Method: Compositional matrix adjust.
 Identities = 157/185 (85%), Positives = 165/185 (90%), Gaps = 0/185 (0%)

Query  34   TMGQNPDKSPHLTGEQKIQLIDSMRHKGSYEAARERLTATAQIIADRVSAAIPGQTWKFN  93
            T   NPD S  LTGEQKIQLIDS R+KGSYEAARERLTATA+IIADRVSAAIPGQTWKF+
Sbjct  30   TXDHNPDTSRRLTGEQKIQLIDSXRNKGSYEAARERLTATARIIADRVSAAIPGQTWKFD  89

Query  94   DDSYGQDFYRNGSLCKELSADIARRPMAKPVDFGSTFSAEDFKIAANIVREEAAKYGVTT  153
            DD   Q   RNG+LC +L+ADIARRP+A  V FG+TFSAEDFKIAANIVREEAAKYG TT
Sbjct  90   DDPNIQQSDRNGALCDKLTADIARRPIANSVXFGATFSAEDFKIAANIVREEAAKYGATT  149

Query  154  ESSLFNESAKRDYDVQGNGYEFNLGQIKFATLNITGDCFLLQKVLDLPAGQLPPEPPIWP  213
            ESSLFNESAKRDYDVQGNGYEF L QIKFATLNITGDCFLLQKVLDLPAGQLPPEPPIWP
Sbjct  150  ESSLFNESAKRDYDVQGNGYEFRLLQIKFATLNITGDCFLLQKVLDLPAGQLPPEPPIWP  209

Query  214  TTSTP  218
            TTSTP
Sbjct  210  TTSTP  214


>gi|289570707|ref|ZP_06450934.1| lipoprotein lppA [Mycobacterium tuberculosis T17]
 gi|289544461|gb|EFD48109.1| lipoprotein lppA [Mycobacterium tuberculosis T17]
Length=145

 Score =  241 bits (616),  Expect = 4e-62, Method: Compositional matrix adjust.
 Identities = 119/145 (83%), Positives = 129/145 (89%), Gaps = 0/145 (0%)

Query  1    LIAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHK  60
            +IAPQPI RTLPRWQRIVALTMIGISTALIGGCTM  NPD S  LTGEQKIQLIDSMR+K
Sbjct  1    MIAPQPISRTLPRWQRIVALTMIGISTALIGGCTMDHNPDTSRRLTGEQKIQLIDSMRNK  60

Query  61   GSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPM  120
            GSYEAARERLTATA+IIADRVSAAIPGQTWKF+DD   Q   RNG+LC +L+ADIARRP+
Sbjct  61   GSYEAARERLTATARIIADRVSAAIPGQTWKFDDDPNIQQSDRNGALCDKLTADIARRPI  120

Query  121  AKPVDFGSTFSAEDFKIAANIVREE  145
            A  V FG+TFSAEDFKIAA+IVREE
Sbjct  121  ANSVMFGATFSAEDFKIAAHIVREE  145


>gi|289762712|ref|ZP_06522090.1| lipoprotein [Mycobacterium tuberculosis GM 1503]
 gi|289710218|gb|EFD74234.1| lipoprotein [Mycobacterium tuberculosis GM 1503]
Length=132

 Score =  221 bits (563),  Expect = 6e-56, Method: Compositional matrix adjust.
 Identities = 108/128 (85%), Positives = 115/128 (90%), Gaps = 0/128 (0%)

Query  91   KFNDDSYGQDFYRNGSLCKELSADIARRPMAKPVDFGSTFSAEDFKIAANIVREEAAKYG  150
            +F+DD   Q   RNG+LC +L+ADIARRP+A  V FG+TFSAEDFKIAANIVREEAAKYG
Sbjct  4    EFDDDPNIQQSDRNGALCDKLTADIARRPIANSVMFGATFSAEDFKIAANIVREEAAKYG  63

Query  151  VTTESSLFNESAKRDYDVQGNGYEFNLGQIKFATLNITGDCFLLQKVLDLPAGQLPPEPP  210
             TTESSLFNESAKRDYDVQGNGYEF L QIKFATLNITGDCFLLQKVLDLPAGQLPPEPP
Sbjct  64   ATTESSLFNESAKRDYDVQGNGYEFRLLQIKFATLNITGDCFLLQKVLDLPAGQLPPEPP  123

Query  211  IWPTTSTP  218
            IWPTTSTP
Sbjct  124  IWPTTSTP  131


>gi|240171303|ref|ZP_04749962.1| putative lipoprotein [Mycobacterium kansasii ATCC 12478]
Length=187

 Score = 59.3 bits (142),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 48/191 (26%), Positives = 82/191 (43%), Gaps = 23/191 (12%)

Query  13   RWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHKGSYEAARERLTA  72
            RW     LT++ +     G    G    +   L+ E+  +L +++R K + EAA++   A
Sbjct  2    RWPMAWLLTVVCVMVLGCGRSGHGTGSGEEGPLSPEKVAELENALRAKPALEAAKDEYRA  61

Query  73   TAQIIADRVSAAIPGQTWKFNDDSY---GQDFYRNGSLCKELSADIARRPMAKPVDFGST  129
             A  +A+ ++A +PG TW+ + D++   G D+                   AK   F   
Sbjct  62   VAAEMANAITALVPGLTWRTDMDTWTGCGGDY---------------EWTRAKAAYFMVV  106

Query  130  FSA----EDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGN-GYEFNLGQIKFAT  184
            FS     + +  A  IV++   ++G T    + N+    D  + G+ G EF L   K A 
Sbjct  107  FSGPIPDDKWPQAVQIVKDRGKQFGATNFGVMKNKPGDHDVYIAGHGGVEFKLSTQKAAV  166

Query  185  LNITGDCFLLQ  195
            L    DC + Q
Sbjct  167  LTAQSDCRISQ  177


>gi|240171305|ref|ZP_04749964.1| putative lipoprotein [Mycobacterium kansasii ATCC 12478]
Length=186

 Score = 58.2 bits (139),  Expect = 8e-07, Method: Compositional matrix adjust.
 Identities = 46/188 (25%), Positives = 79/188 (43%), Gaps = 22/188 (11%)

Query  9    RTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHKGSYEAARE  68
            R L  W  +V + ++G      G    G    +   L+ E+  +L + +R K S EAARE
Sbjct  2    RWLVAWLAVVCVMVLGC-----GRIGHGTGRGEEGPLSPEKVAELENPLRAKPSLEAARE  56

Query  69   RLTATAQIIADRVSAAIPGQTWKFNDDSY----GQDFYRNGSLCKELSADIARRPMAKPV  124
               A    +A+ ++  +PG TW+ + DS+    G+  + +  +   +            V
Sbjct  57   EYRAAVTQMANSITGLVPGLTWRTDMDSWNHCEGEYVWTDAKMAYLM------------V  104

Query  125  DFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGN-GYEFNLGQIKFA  183
             F      + +  A  IV++   ++G T    + N+    D  + G+ G EF L   K A
Sbjct  105  VFSGPIPDDKWPQAVQIVKDRGKQFGATNFGVMKNKPGDHDVYIAGHGGVEFKLSTQKAA  164

Query  184  TLNITGDC  191
             L    DC
Sbjct  165  VLTAQSDC  172


>gi|340627797|ref|YP_004746249.1| putative lipoprotein LPPV [Mycobacterium canettii CIPT 140010059]
 gi|340005987|emb|CCC45154.1| putative conserved lipoprotein LPPV [Mycobacterium canettii CIPT 
140010059]
Length=198

 Score = 54.3 bits (129),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 50/209 (24%), Positives = 84/209 (41%), Gaps = 17/209 (8%)

Query  13   RWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHKGSYEAARERLTA  72
            RW     L ++ +     G    G    +   L+ E+  +L + +R K   EAA+++  A
Sbjct  2    RWPTAWLLALVCVMATGCGPGGHGTRAGEEGPLSPERVAELENPLRAKPPLEAAKDQYRA  61

Query  73   TAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPMAKPVDFGSTFSA  132
                +A+ ++A +PG TW  + DS+       G      SA +A       V F      
Sbjct  62   AVTQLANAITALVPGLTWSMDIDSWNH----CGGEYVWTSAKMAYF----MVGFSGPIPD  113

Query  133  EDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGN-GYEFNLGQIKFATLNITGDC  191
            + +  A  IV++   ++G T+   + N+    D    G+ G EF       ++L    DC
Sbjct  114  DKWPQAVQIVKDGVEQFGATSFGVMKNKPGDHDVYFAGHGGVEFKFATQVASSLTAQSDC  173

Query  192  FLLQKVLDLPAGQLPPEPPIWPTTSTPTP  220
             + Q           P+P   PTT  P P
Sbjct  174  RISQTDT--------PKPSPRPTTPLPAP  194


>gi|183981927|ref|YP_001850218.1| lipoprotein LppV_1 [Mycobacterium marinum M]
 gi|183175253|gb|ACC40363.1| conserved lipoprotein LppV_1 [Mycobacterium marinum M]
Length=190

 Score = 53.5 bits (127),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 39/152 (26%), Positives = 70/152 (47%), Gaps = 17/152 (11%)

Query  45   LTGEQKIQLIDSMRHKGSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSY----GQD  100
            L+ E+  +L + +R K S EAA+++  A    +AD ++A +PG TW  + DS+    G+ 
Sbjct  37   LSPEKVAELENPLRAKPSLEAAKDQYRAAVTRMADAIAALVPGLTWSMDVDSWNHCGGEY  96

Query  101  FYRNGSLCKELSADIARRPMAKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNE  160
             + N  +   +            V F      + +  A  IV++   ++G TT   + ++
Sbjct  97   VWTNAKMAYFM------------VGFSGPIPDDKWPQAVRIVKDGGQQFGATTFGVMKDK  144

Query  161  SAKRDYDVQGN-GYEFNLGQIKFATLNITGDC  191
                D  + G+ G EF LG    ++L    DC
Sbjct  145  PGDHDVYLAGHGGVEFKLGTQVASSLTAQSDC  176


>gi|240171304|ref|ZP_04749963.1| lipoprotein LppV_1 [Mycobacterium kansasii ATCC 12478]
Length=186

 Score = 53.5 bits (127),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 43/192 (23%), Positives = 82/192 (43%), Gaps = 22/192 (11%)

Query  9    RTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHKGSYEAARE  68
            R L  W  +V + ++G      G    G    +   L+ E+  +L + +R K   EAA++
Sbjct  2    RWLVAWLAVVCVMVLGC-----GRIGHGTGRGEEGPLSPEKVAELENPLRAKPPLEAAKD  56

Query  69   RLTATAQIIADRVSAAIPGQTWKFNDDSY----GQDFYRNGSLCKELSADIARRPMAKPV  124
            +  A    +A+ ++A +PG TW  + DS+    G+  + +  +   ++            
Sbjct  57   QYRAAVTQMANAITALVPGLTWSMDMDSWNHCGGEYVWTDAKMAYFMAG-----------  105

Query  125  DFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQG-NGYEFNLGQIKFA  183
             F      + +  A  IV++ A ++G T    + ++    D  + G  G EF LG    +
Sbjct  106  -FSGPIPDDKWPQAVQIVKDGAKQFGATNFGVMKDKPGDHDVYISGAGGIEFKLGTQVAS  164

Query  184  TLNITGDCFLLQ  195
            +L    DC + Q
Sbjct  165  SLTAQSDCRISQ  176


>gi|240171306|ref|ZP_04749965.1| putative lipoprotein [Mycobacterium kansasii ATCC 12478]
Length=182

 Score = 52.4 bits (124),  Expect = 4e-05, Method: Compositional matrix adjust.
 Identities = 49/186 (27%), Positives = 84/186 (46%), Gaps = 20/186 (10%)

Query  14   WQRIVALTMIGISTALIGGCT-MGQNPDKSPHLTGEQKIQLIDSMRHKGSYEAARERLTA  72
            W  ++ L M G+    IG  T  G+    SP    E+  +L + +R K   EAA+++  A
Sbjct  3    WLMVLILVM-GLGCGRIGHRTGRGEEGPLSP----EKVAELENPLRAKPPLEAAKDQYRA  57

Query  73   TAQIIADRVSAAIPGQTWKFNDDSY---GQDFYRNGSLCKELSADIARRPMAKPVDFGST  129
                +A+ ++A +PG TW  + D++   G D+        E +   A   M   V F   
Sbjct  58   AVTQMANAITALVPGLTWSMDMDTWTGCGGDY--------EWTRAKAAYFM---VGFSGP  106

Query  130  FSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQIKFATLNITG  189
               +++  A  IV++ A ++GVT    + ++    D  + G G  F LG    ++L    
Sbjct  107  IPDDNWPQAVQIVKDGAKQFGVTNFGVMKDKPGDHDIYISGAGGIFKLGTQVASSLTAQS  166

Query  190  DCFLLQ  195
            DC + Q
Sbjct  167  DCRISQ  172


>gi|118617693|ref|YP_906025.1| lipoprotein LppV_1 [Mycobacterium ulcerans Agy99]
 gi|118569803|gb|ABL04554.1| conserved lipoprotein LppV_1 [Mycobacterium ulcerans Agy99]
Length=191

 Score = 52.4 bits (124),  Expect = 5e-05, Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 69/152 (46%), Gaps = 17/152 (11%)

Query  45   LTGEQKIQLIDSMRHKGSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSY----GQD  100
            L+ E+  +L + +R K S EA +++  A    +AD ++A +PG TW  + DS+    G+ 
Sbjct  38   LSPEKVAELENPLRAKPSLEAVKDQYRAAVTRMADAIAALVPGLTWSMDVDSWNHCGGEY  97

Query  101  FYRNGSLCKELSADIARRPMAKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNE  160
             + N  +   +            V F      + +  A  IV++   ++G TT   + ++
Sbjct  98   VWTNAKMAYFM------------VGFSGPIPDDKWPQAVRIVKDGGQQFGATTFGVMKDK  145

Query  161  SAKRDYDVQGN-GYEFNLGQIKFATLNITGDC  191
                D  + G+ G EF LG    ++L    DC
Sbjct  146  PGDHDVYLAGHGGVEFKLGTQVASSLTAQSDC  177


>gi|118617694|ref|YP_906026.1| lipoprotein LppV [Mycobacterium ulcerans Agy99]
 gi|118569804|gb|ABL04555.1| conserved lipoprotein LppV [Mycobacterium ulcerans Agy99]
Length=190

 Score = 50.8 bits (120),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 40/148 (28%), Positives = 67/148 (46%), Gaps = 9/148 (6%)

Query  45   LTGEQKIQLIDSMRHKGSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRN  104
            L+ E+  +L + +R K S EA +++  A    +AD ++A +PG TW  + DS+      N
Sbjct  37   LSPEKVAELENPLRAKPSLEAVKDQYRAAVTRMADAIAALVPGLTWSMDVDSW------N  90

Query  105  GSLCKELSADIARRPMAKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKR  164
            G  C         R     V F      + +  A  IV++   ++G TT   + ++    
Sbjct  91   G--CGGDYEWTRARTAYFMVGFSGPIPDDKWPQAVRIVKDGGQQFGATTFGVMKDKPGDH  148

Query  165  DYDVQGN-GYEFNLGQIKFATLNITGDC  191
            D  + G+ G EF LG    ++L    DC
Sbjct  149  DVYLAGHGGVEFKLGTQVASSLTAQSDC  176


>gi|317507795|ref|ZP_07965497.1| hypothetical protein HMPREF9336_01869 [Segniliparus rugosus ATCC 
BAA-974]
 gi|316253914|gb|EFV13282.1| hypothetical protein HMPREF9336_01869 [Segniliparus rugosus ATCC 
BAA-974]
Length=215

 Score = 48.9 bits (115),  Expect = 5e-04, Method: Compositional matrix adjust.
 Identities = 43/158 (28%), Positives = 70/158 (45%), Gaps = 8/158 (5%)

Query  40   DKSPHLTGEQKIQLIDSMRHKGSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQ  99
            D   H+T +Q      S + KG+ E A + L AT    AD+++A +PG TW+++ D    
Sbjct  49   DAPKHMTKDQIASFEASYQGKGTTEQAAKDLEATIAKTADKITALVPGLTWQWHRDG---  105

Query  100  DFYRNGSLCKELSADI-ARRPMAKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLF  158
                 G   K+ + D    R   +   F      E +  A  IVR EA  +G+T +    
Sbjct  106  ---GPGGCEKDPAGDTWVMRMYTRHALFSGPIPEELWPKAVAIVRAEAEFWGMTAQFKYQ  162

Query  159  NESAKRDYDVQG-NGYEFNLGQIKFATLNITGDCFLLQ  195
            + + + D      +G E N+G    A++  T  C L +
Sbjct  163  DVAKQHDLVFSSEDGGEINIGTAVQASITGTTPCRLRE  200


>gi|31793972|ref|NP_856465.1| lipoprotein LppV [Mycobacterium bovis AF2122/97]
 gi|121638676|ref|YP_978900.1| putative lipoprotein lppV [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224991168|ref|YP_002645857.1| putative lipoprotein [Mycobacterium bovis BCG str. Tokyo 172]
 18 more sequence titles
 Length=187

 Score = 47.8 bits (112),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 43/187 (23%), Positives = 75/187 (41%), Gaps = 23/187 (12%)

Query  13   RWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHKGSYEAARERLTA  72
            RW     L ++ +     G    G    +   L+ E+  +L + +R K   E A+++  A
Sbjct  2    RWPTAWLLALVCVMATGCGPSGHGTRAGEEGPLSPEKVAELENPLRAKPPLEDAKDQYRA  61

Query  73   TAQIIADRVSAAIPGQTWKFNDDSY---GQDFYRNGSLCKELSADIARRPMAKPVDFGST  129
                +A+ ++A +PG TW+ + D++   G ++                   AK   F   
Sbjct  62   AVTQLANAITALVPGLTWRTDMDTWTGCGGEYEWT---------------RAKAAYFMIV  106

Query  130  FSA----EDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGN-GYEFNLGQIKFAT  184
            FS     + +  A  IV++   ++G T    + N+ A  D    G+ G EF     K A 
Sbjct  107  FSGPIPDDKWLQAVQIVKDGVEQFGATGFGVMKNKPADHDVYFAGHGGVEFKFSTQKAAV  166

Query  185  LNITGDC  191
            L    DC
Sbjct  167  LTAQSDC  173


>gi|15842334|ref|NP_337371.1| hypothetical protein MT2865 [Mycobacterium tuberculosis CDC1551]
 gi|13882630|gb|AAK47185.1| hypothetical protein MT2865 [Mycobacterium tuberculosis CDC1551]
Length=188

 Score = 47.8 bits (112),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 43/187 (23%), Positives = 75/187 (41%), Gaps = 23/187 (12%)

Query  13   RWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHKGSYEAARERLTA  72
            RW     L ++ +     G    G    +   L+ E+  +L + +R K   E A+++  A
Sbjct  3    RWPTAWLLALVCVMATGCGPSGHGTRAGEEGPLSPEKVAELENPLRAKPPLEDAKDQYRA  62

Query  73   TAQIIADRVSAAIPGQTWKFNDDSY---GQDFYRNGSLCKELSADIARRPMAKPVDFGST  129
                +A+ ++A +PG TW+ + D++   G ++                   AK   F   
Sbjct  63   AVTQLANAITALVPGLTWRTDMDTWTGCGGEYEWT---------------RAKAAYFMIV  107

Query  130  FSA----EDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGN-GYEFNLGQIKFAT  184
            FS     + +  A  IV++   ++G T    + N+ A  D    G+ G EF     K A 
Sbjct  108  FSGPIPDDKWLQAVQIVKDGVEQFGATGFGVMKNKPADHDVYFAGHGGVEFKCSTQKAAV  167

Query  185  LNITGDC  191
            L    DC
Sbjct  168  LTAQSDC  174


>gi|15609933|ref|NP_217312.1| lipoprotein LppV [Mycobacterium tuberculosis H37Rv]
 gi|148662638|ref|YP_001284161.1| putative lipoprotein LppV [Mycobacterium tuberculosis H37Ra]
 gi|148823984|ref|YP_001288738.1| lipoprotein lppV [Mycobacterium tuberculosis F11]
 51 more sequence titles
 Length=187

 Score = 47.4 bits (111),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 43/187 (23%), Positives = 75/187 (41%), Gaps = 23/187 (12%)

Query  13   RWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHKGSYEAARERLTA  72
            RW     L ++ +     G    G    +   L+ E+  +L + +R K   E A+++  A
Sbjct  2    RWPTAWLLALVCVMATGCGPSGHGTRAGEEGPLSPEKVAELENPLRAKPPLEDAKDQYRA  61

Query  73   TAQIIADRVSAAIPGQTWKFNDDSY---GQDFYRNGSLCKELSADIARRPMAKPVDFGST  129
                +A+ ++A +PG TW+ + D++   G ++                   AK   F   
Sbjct  62   AVTQLANAITALVPGLTWRTDMDTWTGCGGEYEWT---------------RAKAAYFMIV  106

Query  130  FSA----EDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGN-GYEFNLGQIKFAT  184
            FS     + +  A  IV++   ++G T    + N+ A  D    G+ G EF     K A 
Sbjct  107  FSGPIPDDKWLQAVQIVKDGVEQFGATGFGVMKNKPADHDVYFAGHGGVEFKCSTQKAAV  166

Query  185  LNITGDC  191
            L    DC
Sbjct  167  LTAQSDC  173


>gi|296393638|ref|YP_003658522.1| lipoprotein LppV [Segniliparus rotundus DSM 44985]
 gi|296180785|gb|ADG97691.1| lipoprotein LppV [Segniliparus rotundus DSM 44985]
Length=218

 Score = 47.0 bits (110),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 44/182 (25%), Positives = 78/182 (43%), Gaps = 11/182 (6%)

Query  17   IVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHKGSYEAARERLTATAQI  76
            ++A+  +G+   L G   M   P    H+  +Q      S + KG+ E A + L +    
Sbjct  29   LLAVCGVGVYRFLEGLKGMDDAPK---HMAKDQIAAFEASYQDKGTAEQAAKDLESVIAK  85

Query  77   IADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADI-ARRPMAKPVDFGSTFSAEDF  135
             AD+++A +PG TWK++ D         G   K+ + D    R   +   F      + +
Sbjct  86   TADKIAALVPGLTWKWHRDG------GPGGCPKDPAGDTWVMRMYTRHALFSGPIPEDVW  139

Query  136  KIAANIVREEAAKYGVTTESSLFNESAKRDYDV-QGNGYEFNLGQIKFATLNITGDCFLL  194
              A  +VR EA   G+T +    + + + D      +G E N+G    A++  T  C L 
Sbjct  140  PQAVAVVRSEAQFLGMTAQFKYQDAAKQHDLVFSSADGGEINIGTAVQASITGTTPCRLR  199

Query  195  QK  196
            ++
Sbjct  200  EQ  201


>gi|296393636|ref|YP_003658520.1| lipoprotein LppV [Segniliparus rotundus DSM 44985]
 gi|296180783|gb|ADG97689.1| lipoprotein LppV [Segniliparus rotundus DSM 44985]
Length=218

 Score = 45.4 bits (106),  Expect = 0.006, Method: Compositional matrix adjust.
 Identities = 22/57 (39%), Positives = 32/57 (57%), Gaps = 0/57 (0%)

Query  40   DKSPHLTGEQKIQLIDSMRHKGSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDS  96
            D   H+T +Q     +  R KGS E A + L A     AD+++A +PG TWK+ DD+
Sbjct  49   DAPRHMTPQQVTAFEERYRDKGSVEQAAKDLEAVIAKTADKIAALVPGLTWKWKDDT  105


>gi|296392596|ref|YP_003657480.1| lipoprotein LppV [Segniliparus rotundus DSM 44985]
 gi|296179743|gb|ADG96649.1| lipoprotein LppV [Segniliparus rotundus DSM 44985]
Length=223

 Score = 43.5 bits (101),  Expect = 0.022, Method: Compositional matrix adjust.
 Identities = 31/122 (26%), Positives = 48/122 (40%), Gaps = 5/122 (4%)

Query  44   HLTGEQKIQLIDSMRHKGSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYR  103
            H+T EQ     +   +K + E   ++L A      D ++A +PG TW + D     D  R
Sbjct  62   HMTKEQAEAFEERYWNKSTLEQEGQKLEALLARTGDEIAALVPGLTWSWKD-----DMSR  116

Query  104  NGSLCKELSADIARRPMAKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAK  163
             G      +     R  A+ V F        +  A  +VR  AA YG T   +  ++   
Sbjct  117  TGCPGDPAADTWVGRFWARKVVFDGPIPPGVWPQAVEVVRRAAASYGATEYQNFIDKPDN  176

Query  164  RD  165
             D
Sbjct  177  HD  178


>gi|340627796|ref|YP_004746248.1| putative lipoprotein LPPV [Mycobacterium canettii CIPT 140010059]
 gi|340005986|emb|CCC45153.1| putative conserved lipoprotein LPPV [Mycobacterium canettii CIPT 
140010059]
Length=187

 Score = 43.1 bits (100),  Expect = 0.029, Method: Compositional matrix adjust.
 Identities = 38/191 (20%), Positives = 75/191 (40%), Gaps = 9/191 (4%)

Query  13   RWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHKGSYEAARERLTA  72
            RW     L ++ +     G    G    +   L+ E+  +L + +R     E A+++  A
Sbjct  2    RWPMAWLLALVCVMATGCGPSGHGTRSGEEGPLSPERVAELENPLRANPPLEDAKDQYRA  61

Query  73   TAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPMAKPVDFGSTFSA  132
                +A+ ++A +P  TW+ + D++        + C         +     + F      
Sbjct  62   AVTQLANAITALVPDLTWRTDMDTW--------TGCGGEYEWTRAKAAYFMIVFSGPIPD  113

Query  133  EDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGN-GYEFNLGQIKFATLNITGDC  191
            + +  A  IV++   ++G T    + N+ A  D    G+ G EF     K A L    DC
Sbjct  114  DKWLQAVQIVKDGVEQFGATGFGMMKNKPADHDVYFAGHGGVEFKFSTQKAAVLTAQSDC  173

Query  192  FLLQKVLDLPA  202
             + +    +P+
Sbjct  174  RISRTDTPIPS  184


>gi|317507794|ref|ZP_07965496.1| hypothetical protein HMPREF9336_01868 [Segniliparus rugosus ATCC 
BAA-974]
 gi|316253913|gb|EFV13281.1| hypothetical protein HMPREF9336_01868 [Segniliparus rugosus ATCC 
BAA-974]
Length=204

 Score = 43.1 bits (100),  Expect = 0.031, Method: Compositional matrix adjust.
 Identities = 41/158 (26%), Positives = 66/158 (42%), Gaps = 8/158 (5%)

Query  40   DKSPHLTGEQKIQLIDSMRHKGSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQ  99
            D   H+   +     +  R KGS E A + L AT    AD+++A  PG TWK++ D    
Sbjct  38   DAPKHMAKSEVPAFEERYRGKGSVEQAAKDLEATIAKTADKITALAPGLTWKWHRDG---  94

Query  100  DFYRNGSLCKELSADI-ARRPMAKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLF  158
                N    ++ +AD    R   +   F      E +  A  IVR EA  +G+T +    
Sbjct  95   ---GNVGCPQDQAADTRVTRFATRHALFSGPIPEELWPKAVAIVRAEAEFWGMTAQFKYQ  151

Query  159  NESAKRDYDVQG-NGYEFNLGQIKFATLNITGDCFLLQ  195
            + + + D      +G E  +G    A +     C L++
Sbjct  152  DVAKQHDLVFSAEDGGEIRIGSAVEAFIRGKTPCRLME  189


>gi|339295645|gb|AEJ47756.1| hypothetical protein CCDC5079_2566 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339299262|gb|AEJ51372.1| hypothetical protein CCDC5180_2535 [Mycobacterium tuberculosis 
CCDC5180]
Length=154

 Score = 41.6 bits (96),  Expect = 0.073, Method: Compositional matrix adjust.
 Identities = 37/155 (24%), Positives = 66/155 (43%), Gaps = 23/155 (14%)

Query  45   LTGEQKIQLIDSMRHKGSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSY---GQDF  101
            ++ E+  +L + +R K   E A+++  A    +A+ ++A +PG TW+ + D++   G ++
Sbjct  1    MSPEKVAELENPLRAKPPLEDAKDQYRAAVTQLANAITALVPGLTWRTDMDTWTGCGGEY  60

Query  102  YRNGSLCKELSADIARRPMAKPVDFGSTFSA----EDFKIAANIVREEAAKYGVTTESSL  157
                               AK   F   FS     + +  A  IV++   ++G T    +
Sbjct  61   EWT---------------RAKAAYFMIVFSGPIPDDKWLQAVQIVKDGVEQFGATGFGVM  105

Query  158  FNESAKRDYDVQGN-GYEFNLGQIKFATLNITGDC  191
             N+ A  D    G+ G EF     K A L    DC
Sbjct  106  KNKPADHDVYFAGHGGVEFKCSTQKAAVLTAQSDC  140


>gi|334321122|ref|YP_004557751.1| MCP methyltransferase/methylesterase CheR/CheB with PAS/PAC sensor 
[Sinorhizobium meliloti AK83]
 gi|334098861|gb|AEG56871.1| MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC 
sensor [Sinorhizobium meliloti AK83]
Length=1161

 Score = 40.4 bits (93),  Expect = 0.18, Method: Compositional matrix adjust.
 Identities = 44/172 (26%), Positives = 76/172 (45%), Gaps = 27/172 (15%)

Query  13   RWQRIVALTMIGISTALIGGCT-------MGQNPDKSPHLTGEQKIQLIDSMRHKGSYEA  65
            +++R   L  IG    + G  T       + +NP+++  L  +  I +    R   ++EA
Sbjct  224  QYKRATILRRIGRRAQIAGRETFADYYNYLRENPEEAQALFSDFLISVTTFFRDPSAFEA  283

Query  66   ARERLTAT---AQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPMAK  122
              ER+       + +AD +   +PG        + G++ Y  G L  E   + ARR ++ 
Sbjct  284  LAERVIPQLFDGKEVADAIRVWVPGC-------ATGEETYTMGMLLLE---EAARRDLSP  333

Query  123  PVD-FGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGY  173
             +  FGS   A+  +IA    RE   +Y  T ES L  E  +R +  +G+ Y
Sbjct  334  EIQVFGSDLDAQALRIA----RE--GRYPSTIESDLSEERLRRFFQREGDHY  379


>gi|296392494|ref|YP_003657378.1| hypothetical protein Srot_0054 [Segniliparus rotundus DSM 44985]
 gi|296179641|gb|ADG96547.1| hypothetical protein Srot_0054 [Segniliparus rotundus DSM 44985]
Length=218

 Score = 40.0 bits (92),  Expect = 0.25, Method: Compositional matrix adjust.
 Identities = 39/148 (27%), Positives = 62/148 (42%), Gaps = 15/148 (10%)

Query  40   DKSPHLTGEQKIQLIDSMRHKGSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQ  99
            D   H+  E+     +  R KGS + A E L A     AD+++A +PG TWK+       
Sbjct  49   DAPRHMAQEKVPAFEERYRDKGSVQQAAEDLEAVIARAADKIAALVPGLTWKWQ------  102

Query  100  DFYRNGSL-CKELSADIAR--RPMAKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESS  156
              Y  G++ C   +A   R  R   +   F      + +  A  IVR EA   G+T +  
Sbjct  103  --YDPGNIGCPADAASDTRVTRFATRLAGFDGAIPEDVWPRAVAIVRSEAEFLGMTAQFK  160

Query  157  LFNESAKRDYDVQGNGYEFNLGQIKFAT  184
              + + + D          + G+I+ AT
Sbjct  161  YQDAAKQHDLVFSSQ----DGGEIRIAT  184


>gi|333815786|gb|AEG08453.1| MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC 
sensor [Sinorhizobium meliloti BL225C]
Length=1160

 Score = 38.9 bits (89),  Expect = 0.51, Method: Compositional matrix adjust.
 Identities = 37/143 (26%), Positives = 66/143 (47%), Gaps = 20/143 (13%)

Query  35   MGQNPDKSPHLTGEQKIQLIDSMRHKGSYEAARERLTAT---AQIIADRVSAAIPGQTWK  91
            + +NP+++  L  +  I +    R + ++EA  ER+       + +AD +   +PG    
Sbjct  253  LRENPEEAQALFSDFLISVTTFFRDRSAFEALAERVIPQLFDGKEVADAIRVWVPGC---  309

Query  92   FNDDSYGQDFYRNGSLCKELSADIARRPMAKPVD-FGSTFSAEDFKIAANIVREEAAKYG  150
                + G++ Y  G L  E   + ARR ++  +  FGS   A+  +IA    RE   +Y 
Sbjct  310  ----ATGEETYTMGMLLLE---EAARRDLSPEIQVFGSDLDAQALRIA----RE--GRYP  356

Query  151  VTTESSLFNESAKRDYDVQGNGY  173
             T E  L  E  +R +  +G+ Y
Sbjct  357  STIEGDLSEERLRRFFQREGDHY  379


>gi|336038014|gb|AEH83944.1| putative methyltransferase [Sinorhizobium meliloti SM11]
Length=1161

 Score = 38.9 bits (89),  Expect = 0.55, Method: Compositional matrix adjust.
 Identities = 38/143 (27%), Positives = 66/143 (47%), Gaps = 20/143 (13%)

Query  35   MGQNPDKSPHLTGEQKIQLIDSMRHKGSYEAARERLTAT---AQIIADRVSAAIPGQTWK  91
            + +NP+++  L  +  I +    R   ++EA  ER+       + +AD +   +PG    
Sbjct  253  LRENPEEAQALFSDFLISVTTFFRDPSAFEALAERVIPQLFDGKEVADAIRVWVPGC---  309

Query  92   FNDDSYGQDFYRNGSLCKELSADIARRPMAKPVD-FGSTFSAEDFKIAANIVREEAAKYG  150
                + G++ Y  G L  E   + ARR ++  +  FGS   A+  +IA    RE   +Y 
Sbjct  310  ----ATGEETYTMGMLLLE---EAARRDLSPEIQVFGSDLDAQALRIA----RE--GRYP  356

Query  151  VTTESSLFNESAKRDYDVQGNGY  173
             T ES L  E  +R +  +G+ Y
Sbjct  357  STIESDLSEERLRRFFQREGDHY  379


>gi|221134103|ref|ZP_03560408.1| hypothetical protein GHTCC_04164 [Glaciecola sp. HTCC2999]
Length=441

 Score = 38.1 bits (87),  Expect = 0.94, Method: Compositional matrix adjust.
 Identities = 19/52 (37%), Positives = 25/52 (49%), Gaps = 5/52 (9%)

Query  9   RTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHK  60
           + LPRWQRI+    I ++T  + GC +   P       GE K   I S  HK
Sbjct  8   QNLPRWQRIITAAAISLTTLSLSGCVIAHTP-----YQGEVKYGFIKSPPHK  54


>gi|120612396|ref|YP_972074.1| peptidase M16 domain-containing protein [Acidovorax citrulli 
AAC00-1]
 gi|120590860|gb|ABM34300.1| peptidase M16 domain protein [Acidovorax citrulli AAC00-1]
Length=455

 Score = 37.4 bits (85),  Expect = 1.5, Method: Compositional matrix adjust.
 Identities = 35/153 (23%), Positives = 65/153 (43%), Gaps = 15/153 (9%)

Query  4    PQPIPRTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHKGSY  63
            P P+  TLP   R++AL M  + +A +G      + D++P   G   +  ++ M  KG+ 
Sbjct  5    PTPLLHTLPNGVRLLALPMPHVQSASVGVFLRVGSRDETPETNGISHV--LEHMAFKGTA  62

Query  64   EAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPMAKP  123
                 R      + A+R+ A +   T K +   +     ++      ++ADI        
Sbjct  63   ----TRSVQAINLDAERLGADVNAYTGKDSTGYFMTGLGQHALQLLGMTADIV-------  111

Query  124  VDFGSTFSAEDFKIAANIVREEAAKYGVTTESS  156
                STF   + +   +++R+EA +Y    E S
Sbjct  112  --LHSTFPEAELQRELDVIRQEAIEYDEDPEDS  142


>gi|16264244|ref|NP_437036.1| chemotaxis methyltransferase [Sinorhizobium meliloti 1021]
 gi|15140369|emb|CAC48896.1| putative methyltransferase [Sinorhizobium meliloti 1021]
Length=1161

 Score = 37.4 bits (85),  Expect = 1.6, Method: Compositional matrix adjust.
 Identities = 38/143 (27%), Positives = 65/143 (46%), Gaps = 20/143 (13%)

Query  35   MGQNPDKSPHLTGEQKIQLIDSMRHKGSYEAARERLTAT---AQIIADRVSAAIPGQTWK  91
            + +NP+++  L  +  I +    R   ++EA  ER+       + +AD +   IPG    
Sbjct  253  LRENPEEAQALFSDFLISVTTFFRDPSAFEALAERVIPQLFDGKEVADAIRVWIPGC---  309

Query  92   FNDDSYGQDFYRNGSLCKELSADIARRPMAKPVD-FGSTFSAEDFKIAANIVREEAAKYG  150
                + G++ Y  G L  E   + ARR ++  +  FGS    +  +IA    RE   +Y 
Sbjct  310  ----ATGEETYTMGMLLIE---EAARRDLSPEIQVFGSDLDEQALRIA----RE--GRYP  356

Query  151  VTTESSLFNESAKRDYDVQGNGY  173
             T ES L  E  +R +  +G+ Y
Sbjct  357  STIESDLSEERLRRFFQREGDHY  379


>gi|153001748|ref|YP_001367429.1| CRISPR-associated Csy1 family protein [Shewanella baltica OS185]
 gi|151366366|gb|ABS09366.1| CRISPR-associated protein, Csy1 family [Shewanella baltica OS185]
Length=453

 Score = 36.6 bits (83),  Expect = 2.8, Method: Compositional matrix adjust.
 Identities = 46/176 (27%), Positives = 64/176 (37%), Gaps = 30/176 (17%)

Query  54   IDSMRHKGSYEAARERLT-ATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELS  112
            I   R KG Y A+ E++  ATA         + P    + N + YGQ F  N   C    
Sbjct  235  IREARKKGHYHASLEKIFPATA---VQNFGGSKPQNISQLNSERYGQSFLLN---CAPPH  288

Query  113  ADIARRPMAKPVDFGSTFSAE-DFKIAANIVREEAAKYGVTTESSLFNESAKRDY-----  166
                 +P   P+   S FS +  FK A  I   +A   GVT + + F    +RDY     
Sbjct  289  YQAQSKP---PLTSASIFSRQLRFKTAGFIREFKAFLAGVTAQENNFKARYQRDYGFVLP  345

Query  167  --DVQGNGYEFNLGQIKFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP  220
              DV  N         +FA    + +C            QL     +W   + P P
Sbjct  346  IIDVLLNEAAIIQNMTEFAGWATSAEC------------QLKTAHGLWLDVANPEP  389


>gi|160876481|ref|YP_001555797.1| CRISPR-associated Csy1 family protein [Shewanella baltica OS195]
 gi|160862003|gb|ABX50537.1| CRISPR-associated protein, Csy1 family [Shewanella baltica OS195]
 gi|315268671|gb|ADT95524.1| CRISPR-associated protein, Csy1 family [Shewanella baltica OS678]
Length=453

 Score = 36.6 bits (83),  Expect = 2.9, Method: Compositional matrix adjust.
 Identities = 46/176 (27%), Positives = 64/176 (37%), Gaps = 30/176 (17%)

Query  54   IDSMRHKGSYEAARERLT-ATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELS  112
            I   R KG Y A+ E++  ATA         + P    + N + YGQ F  N   C    
Sbjct  235  IREARKKGHYHASLEKIFPATA---VQNFGGSKPQNISQLNSERYGQSFLLN---CAPPH  288

Query  113  ADIARRPMAKPVDFGSTFSAE-DFKIAANIVREEAAKYGVTTESSLFNESAKRDY-----  166
                 +P   P+   S FS +  FK A  I   +A   GVT + + F    +RDY     
Sbjct  289  YQAQSKP---PLTSASIFSRQLRFKTAGFIREFKAFLAGVTAQENNFKARYQRDYGFVLP  345

Query  167  --DVQGNGYEFNLGQIKFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP  220
              DV  N         +FA    + +C            QL     +W   + P P
Sbjct  346  IIDVLLNEAAIIQNMTEFAGWATSAEC------------QLKTAHGLWLDVANPEP  389



Lambda     K      H
   0.317    0.134    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 273402666736


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40