BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2546

Length=137
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15842082|ref|NP_337119.1|  hypothetical protein MT2622 [Mycoba...   278    2e-73
gi|15609683|ref|NP_217062.1|  hypothetical protein Rv2546 [Mycoba...   278    2e-73
gi|306780585|ref|ZP_07418922.1|  toxin [Mycobacterium tuberculosi...   277    5e-73
gi|167968845|ref|ZP_02551122.1|  hypothetical protein MtubH3_1276...   274    3e-72
gi|339295424|gb|AEJ47535.1|  hypothetical protein CCDC5079_2345 [...   226    7e-58
gi|302536099|ref|ZP_07288441.1|  conserved hypothetical protein [...  93.6    8e-18
gi|297199892|ref|ZP_06917289.1|  conserved hypothetical protein [...  93.2    1e-17
gi|297160784|gb|ADI10496.1|  hypothetical protein SBI_07376 [Stre...  92.8    2e-17
gi|254388989|ref|ZP_05004220.1|  conserved membrane protein [Stre...  92.0    2e-17
gi|297154824|gb|ADI04536.1|  hypothetical protein SBI_01415 [Stre...  91.7    3e-17
gi|345013748|ref|YP_004816102.1|  PilT protein domain-containing ...  90.5    8e-17
gi|284991226|ref|YP_003409780.1|  PilT protein domain-containing ...  86.7    1e-15
gi|311897824|dbj|BAJ30232.1|  hypothetical protein KSE_44490 [Kit...  86.3    2e-15
gi|254383838|ref|ZP_04999186.1|  conserved hypothetical protein [...  85.9    2e-15
gi|302544584|ref|ZP_07296926.1|  PIN family toxin-antitoxin syste...  85.1    3e-15
gi|290958509|ref|YP_003489691.1|  hypothetical protein SCAB_40681...  84.0    6e-15
gi|167968774|ref|ZP_02551051.1|  hypothetical protein MtubH3_1235...  83.2    1e-14
gi|291452355|ref|ZP_06591745.1|  conserved hypothetical protein [...  82.8    1e-14
gi|289572808|ref|ZP_06453035.1|  toxin [Mycobacterium tuberculosi...  82.4    2e-14
gi|15607370|ref|NP_214743.1|  hypothetical protein Rv0229c [Mycob...  82.4    2e-14
gi|302534504|ref|ZP_07286846.1|  predicted protein [Streptomyces ...  82.0    2e-14
gi|302557955|ref|ZP_07310297.1|  PIN family toxin-antitoxin syste...  81.6    3e-14
gi|343479040|gb|AEM44209.1|  hypothetical protein [uncultured bac...  81.6    4e-14
gi|289445761|ref|ZP_06435505.1|  toxin [Mycobacterium tuberculosi...  80.9    6e-14
gi|297163315|gb|ADI13027.1|  PilT protein domain protein [Strepto...  80.5    8e-14
gi|302546829|ref|ZP_07299171.1|  PIN family toxin-antitoxin syste...  79.7    1e-13
gi|213649389|ref|ZP_03379442.1|  hypothetical protein SentesTy_20...  78.6    3e-13
gi|302869194|ref|YP_003837831.1|  PilT protein domain-containing ...  78.2    4e-13
gi|15609894|ref|NP_217273.1|  hypothetical protein Rv2757c [Mycob...  77.8    5e-13
gi|315504329|ref|YP_004083216.1|  pilt protein domain-containing ...  77.4    6e-13
gi|340627758|ref|YP_004746210.1|  hypothetical protein MCAN_27841...  77.4    7e-13
gi|239988547|ref|ZP_04709211.1|  hypothetical protein SrosN1_1465...  77.0    9e-13
gi|308378090|ref|ZP_07668665.1|  putative type I restriction-modi...  75.9    2e-12
gi|289748705|ref|ZP_06508083.1|  LOW QUALITY PROTEIN: conserved m...  75.9    2e-12
gi|284045212|ref|YP_003395552.1|  PilT protein domain protein [Co...  75.1    3e-12
gi|302559325|ref|ZP_07311667.1|  PIN family toxin-antitoxin syste...  74.3    5e-12
gi|269124363|ref|YP_003297733.1|  PilT protein domain-containing ...  69.7    1e-10
gi|158318849|ref|YP_001511357.1|  PilT domain-containing protein ...  68.9    2e-10
gi|254549168|ref|ZP_05139615.1|  hypothetical protein Mtube_01671...  64.3    5e-09
gi|340627542|ref|YP_004745994.1|  hypothetical protein MCAN_25671...  63.9    8e-09
gi|15609664|ref|NP_217043.1|  hypothetical protein Rv2527 [Mycoba...  62.8    2e-08
gi|167967328|ref|ZP_02549605.1|  hypothetical protein MtubH3_0454...  62.8    2e-08
gi|333992736|ref|YP_004525350.1|  hypothetical protein JDM601_409...  60.1    1e-07
gi|240172880|ref|ZP_04751539.1|  hypothetical protein MkanA1_2644...  59.7    1e-07
gi|328882585|emb|CCA55824.1|  hypothetical protein SVEN_2538 [Str...  59.7    2e-07
gi|284044239|ref|YP_003394579.1|  PilT protein domain protein [Co...  58.5    3e-07
gi|229598010|pdb|3H87|A  Chain A, Rv0301 Rv0300 Toxin Antitoxin C...  57.8    5e-07
gi|289748072|ref|ZP_06507450.1|  conserved hypothetical protein [...  57.8    6e-07
gi|15607442|ref|NP_214815.1|  hypothetical protein Rv0301 [Mycoba...  57.8    6e-07
gi|29832237|ref|NP_826871.1|  hypothetical protein SAV_5694 [Stre...  57.0    9e-07


>gi|15842082|ref|NP_337119.1| hypothetical protein MT2622 [Mycobacterium tuberculosis CDC1551]
 gi|254551596|ref|ZP_05142043.1| hypothetical protein Mtube_14247 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289746329|ref|ZP_06505707.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 7 more sequence titles
 Length=138

 Score =  278 bits (711),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 137/137 (100%), Positives = 137/137 (100%), Gaps = 0/137 (0%)

Query  1    MVFCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDG  60
            MVFCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDG
Sbjct  2    MVFCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDG  61

Query  61   LARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRV  120
            LARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRV
Sbjct  62   LARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRV  121

Query  121  AAITGQPTEWIVPRGTL  137
            AAITGQPTEWIVPRGTL
Sbjct  122  AAITGQPTEWIVPRGTL  138


>gi|15609683|ref|NP_217062.1| hypothetical protein Rv2546 [Mycobacterium tuberculosis H37Rv]
 gi|31793729|ref|NP_856222.1| hypothetical protein Mb2576 [Mycobacterium bovis AF2122/97]
 gi|121638431|ref|YP_978655.1| hypothetical protein BCG_2569 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 55 more sequence titles
 Length=137

 Score =  278 bits (711),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 137/137 (100%), Positives = 137/137 (100%), Gaps = 0/137 (0%)

Query  1    MVFCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDG  60
            MVFCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDG
Sbjct  1    MVFCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDG  60

Query  61   LARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRV  120
            LARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRV
Sbjct  61   LARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRV  120

Query  121  AAITGQPTEWIVPRGTL  137
            AAITGQPTEWIVPRGTL
Sbjct  121  AAITGQPTEWIVPRGTL  137


>gi|306780585|ref|ZP_07418922.1| toxin [Mycobacterium tuberculosis SUMu002]
 gi|306785348|ref|ZP_07423670.1| toxin [Mycobacterium tuberculosis SUMu003]
 gi|306789947|ref|ZP_07428269.1| toxin [Mycobacterium tuberculosis SUMu004]
 13 more sequence titles
 Length=137

 Score =  277 bits (708),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 136/137 (99%), Positives = 137/137 (100%), Gaps = 0/137 (0%)

Query  1    MVFCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDG  60
            MVFCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDG
Sbjct  1    MVFCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDG  60

Query  61   LARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRV  120
            LARIPVGA+TFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRV
Sbjct  61   LARIPVGAKTFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRV  120

Query  121  AAITGQPTEWIVPRGTL  137
            AAITGQPTEWIVPRGTL
Sbjct  121  AAITGQPTEWIVPRGTL  137


>gi|167968845|ref|ZP_02551122.1| hypothetical protein MtubH3_12760 [Mycobacterium tuberculosis 
H37Ra]
Length=136

 Score =  274 bits (701),  Expect = 3e-72, Method: Compositional matrix adjust.
 Identities = 135/136 (99%), Positives = 136/136 (100%), Gaps = 0/136 (0%)

Query  2    VFCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDGL  61
            +FCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDGL
Sbjct  1    MFCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDGL  60

Query  62   ARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVA  121
            ARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVA
Sbjct  61   ARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVA  120

Query  122  AITGQPTEWIVPRGTL  137
            AITGQPTEWIVPRGTL
Sbjct  121  AITGQPTEWIVPRGTL  136


>gi|339295424|gb|AEJ47535.1| hypothetical protein CCDC5079_2345 [Mycobacterium tuberculosis 
CCDC5079]
Length=112

 Score =  226 bits (577),  Expect = 7e-58, Method: Compositional matrix adjust.
 Identities = 111/112 (99%), Positives = 112/112 (100%), Gaps = 0/112 (0%)

Query  26   LSADQIGICDHVRLEILYSANSATDYDALADELDGLARIPVGAETFTRACQVQRELAHVA  85
            +SADQIGICDHVRLEILYSANSATDYDALADELDGLARIPVGAETFTRACQVQRELAHVA
Sbjct  1    MSADQIGICDHVRLEILYSANSATDYDALADELDGLARIPVGAETFTRACQVQRELAHVA  60

Query  86   GLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVAAITGQPTEWIVPRGTL  137
            GLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVAAITGQPTEWIVPRGTL
Sbjct  61   GLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVAAITGQPTEWIVPRGTL  112


>gi|302536099|ref|ZP_07288441.1| conserved hypothetical protein [Streptomyces sp. C]
 gi|302444994|gb|EFL16810.1| conserved hypothetical protein [Streptomyces sp. C]
Length=138

 Score = 93.6 bits (231),  Expect = 8e-18, Method: Compositional matrix adjust.
 Identities = 57/134 (43%), Positives = 75/134 (56%), Gaps = 2/134 (1%)

Query  3    FCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDGLA  62
            F +D SA     +P V         A  +G+C  V LE+LYSA S  D D +   L   A
Sbjct  5    FLIDKSALARYPKPAVRAVIDPLHVAGVLGVCGAVELEVLYSARSKGDADRVRAGLGAFA  64

Query  63   RIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVAA  122
             +    E + RA  VQ++L  VAG + ++V + DLVIAA AE  G  V HYD +YD +A 
Sbjct  65   WLSTPDEVWDRALDVQKQLI-VAG-NWKAVSLPDLVIAATAERHGATVLHYDGDYDMIAE  122

Query  123  ITGQPTEWIVPRGT  136
            +TGQP  W+VPRGT
Sbjct  123  VTGQPMRWVVPRGT  136


>gi|297199892|ref|ZP_06917289.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|197710357|gb|EDY54391.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length=139

 Score = 93.2 bits (230),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 55/140 (40%), Positives = 74/140 (53%), Gaps = 11/140 (7%)

Query  3    FCVDTSAW----HHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADEL  58
            + +DTSA      H ARP    RW   L    I  C    +E LYSA +A D   L  +L
Sbjct  6    YLIDTSALVRILKHPARP----RWEKPLEEGLISRCPMTEVEFLYSARNAEDRSELVQDL  61

Query  59   DGL-ARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENY  117
            D L    P+     +RA  VQREL       HRS    DL++AA AEL G  + HYD ++
Sbjct  62   DALFGWTPLDDRAVSRAWDVQRELTEKG--QHRSAGAVDLLVAATAELQGLTMLHYDNDF  119

Query  118  DRVAAITGQPTEWIVPRGTL  137
            + +A++TGQPT+W+   G+L
Sbjct  120  ETIASVTGQPTQWLAAPGSL  139


>gi|297160784|gb|ADI10496.1| hypothetical protein SBI_07376 [Streptomyces bingchenggensis 
BCW-1]
Length=138

 Score = 92.8 bits (229),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 54/135 (40%), Positives = 81/135 (60%), Gaps = 4/135 (2%)

Query  3    FCVDTSAWHHAARPEVARRWLAAL-SADQIGICDHVRLEILYSANSATDYDALADELDGL  61
            + +D SA     +P  AR  +  L +A  + +C  V LE+L+SA S  D + + DE+ G 
Sbjct  5    YLIDKSALARYPKP-AARAVIEPLHNAGLLAVCGAVELEVLHSARSKGDAERIRDEMRGF  63

Query  62   ARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVA  121
              +P   E + RA +VQ +L  +A  + +++ ++DLVIAA AE    IV HYD +YD +A
Sbjct  64   DWLPTPDEAWDRALEVQTQL--IAAGNWKALSVSDLVIAATAERHSVIVLHYDGDYDMIA  121

Query  122  AITGQPTEWIVPRGT  136
            A+TGQ T W+VP GT
Sbjct  122  AVTGQSTRWVVPSGT  136


>gi|254388989|ref|ZP_05004220.1| conserved membrane protein [Streptomyces clavuligerus ATCC 27064]
 gi|294814925|ref|ZP_06773568.1| toxin [Streptomyces clavuligerus ATCC 27064]
 gi|326443296|ref|ZP_08218030.1| PilT protein domain-containing protein [Streptomyces clavuligerus 
ATCC 27064]
 gi|197702707|gb|EDY48519.1| conserved membrane protein [Streptomyces clavuligerus ATCC 27064]
 gi|294327524|gb|EFG09167.1| toxin [Streptomyces clavuligerus ATCC 27064]
Length=139

 Score = 92.0 bits (227),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 51/134 (39%), Positives = 71/134 (53%), Gaps = 2/134 (1%)

Query  3    FCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDGLA  62
            + VD S W  A +P V       L    +G    + LE+L+SA +A DY+ +        
Sbjct  6    YLVDMSVWARAGKPGVRAALEPKLLRGLVGTSGIIDLELLFSARNADDYERMLGRRQAFE  65

Query  63   RIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVAA  122
              P   E   RA +VQ   A     +HR++ I DL++AA AE  G  + HYD ++D +A 
Sbjct  66   WFPTTDEIVARAIEVQGFCARKG--NHRALSIPDLLVAATAERHGLTLLHYDGDFDLIAE  123

Query  123  ITGQPTEWIVPRGT  136
            +TGQ TEWIVPRGT
Sbjct  124  VTGQLTEWIVPRGT  137


>gi|297154824|gb|ADI04536.1| hypothetical protein SBI_01415 [Streptomyces bingchenggensis 
BCW-1]
Length=139

 Score = 91.7 bits (226),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 55/135 (41%), Positives = 79/135 (59%), Gaps = 4/135 (2%)

Query  3    FCVDTSAWHHAARPEVARRWLAALSADQI-GICDHVRLEILYSANSATDYDALADELDGL  61
            F +D SA     +P+VA   L  L  D +  +C  V +E++YSA +  D   L   L G 
Sbjct  5    FLIDNSALQRWRKPKVAEV-LDPLHEDGVLAVCGPVEIEVMYSARNENDAKRLHWFLAGF  63

Query  62   ARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVA  121
              +P+  E + RA  VQR+   +A  +HR++ + DL+IAAAAE     V HYD++YD +A
Sbjct  64   DYLPMTDEVWDRAKDVQRQA--IAKGNHRALSMPDLLIAAAAERHVVTVLHYDQDYDMIA  121

Query  122  AITGQPTEWIVPRGT  136
            AITGQP +W+V  GT
Sbjct  122  AITGQPMKWVVEAGT  136


>gi|345013748|ref|YP_004816102.1| PilT protein domain-containing protein [Streptomyces violaceusniger 
Tu 4113]
 gi|344040097|gb|AEM85822.1| PilT protein domain protein [Streptomyces violaceusniger Tu 4113]
Length=139

 Score = 90.5 bits (223),  Expect = 8e-17, Method: Compositional matrix adjust.
 Identities = 52/135 (39%), Positives = 77/135 (58%), Gaps = 4/135 (2%)

Query  3    FCVDTSAWHHAARPEVARRWLAALSADQI-GICDHVRLEILYSANSATDYDALADELDGL  61
            F +D SA     +P+VA   L  L  D +  +C  V +E++YSA +  D   L   L G 
Sbjct  5    FLIDNSALQRWRKPKVAEV-LDPLHEDGVLAVCGPVEMEVMYSARNDNDAKRLHWFLSGF  63

Query  62   ARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVA  121
              +P+  E + RA  +QR+   +   +HR++ + DL+IAAAAE     V HYD++YD +A
Sbjct  64   DYLPMPDEVWDRAKDIQRQA--ITKGNHRALSMPDLLIAAAAERHAVTVLHYDQDYDMIA  121

Query  122  AITGQPTEWIVPRGT  136
            AITGQP +W+   GT
Sbjct  122  AITGQPMKWVTEAGT  136


>gi|284991226|ref|YP_003409780.1| PilT protein domain-containing protein [Geodermatophilus obscurus 
DSM 43160]
 gi|284064471|gb|ADB75409.1| PilT protein domain protein [Geodermatophilus obscurus DSM 43160]
Length=141

 Score = 86.7 bits (213),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 57/136 (42%), Positives = 75/136 (56%), Gaps = 3/136 (2%)

Query  3    FCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDY-DALADELDGL  61
            + +DTSA      P+VA R +  LSA  +  C  + LE LYSA S  +Y +  AD     
Sbjct  7    YLLDTSAAARVPAPQVADRVVPLLSAGLLATCAALDLEALYSARSPREYREVRADRRLAY  66

Query  62   ARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVA  121
              +P     + RA QVQ  LA       R V +ADLVI+A AE     V HYD ++D VA
Sbjct  67   EYLPTEDGDWQRALQVQAALADAG--RWRGVGLADLVISAVAERHRVTVLHYDGDFDGVA  124

Query  122  AITGQPTEWIVPRGTL  137
            A+TGQ TEW+VP G++
Sbjct  125  AVTGQRTEWVVPAGSV  140


>gi|311897824|dbj|BAJ30232.1| hypothetical protein KSE_44490 [Kitasatospora setae KM-6054]
Length=139

 Score = 86.3 bits (212),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 57/135 (43%), Positives = 77/135 (58%), Gaps = 4/135 (2%)

Query  3    FCVDTSAWHHAARPEVARRWLAALSADQI-GICDHVRLEILYSANSATDYDALADELDGL  61
            F +D SA     +P V R  L  LS   +  I   V +E+LYSA +  + + L   L G 
Sbjct  6    FLIDKSALARWGKPAV-RPVLDDLSQRALLAISPTVEMEVLYSARTLAEAERLRHLLRGF  64

Query  62   ARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVA  121
              +    E + RA QVQ++ A   G +HR++ +ADL+IAA AE  G  V HYD +YD +A
Sbjct  65   DYLSCPDEVWDRAKQVQQQ-ALFRG-NHRALSMADLLIAATAERHGVTVLHYDGDYDMIA  122

Query  122  AITGQPTEWIVPRGT  136
            AITGQP  W+VP GT
Sbjct  123  AITGQPARWVVPAGT  137


>gi|254383838|ref|ZP_04999186.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194342731|gb|EDX23697.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length=138

 Score = 85.9 bits (211),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 49/133 (37%), Positives = 72/133 (55%), Gaps = 2/133 (1%)

Query  3    FCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDGLA  62
            F +D SA     +P V        +A  + +C  V LE++YSA S  D   + + +    
Sbjct  5    FLIDKSALARYPKPAVHAVIDPLHNAGLLAVCGAVELEVMYSARSKADARRVREGMAAFD  64

Query  63   RIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVAA  122
             +P   E + RA +VQ  L  +   + ++V + DL+IAA AE  G  V HYD +YD +AA
Sbjct  65   WLPTPDEAWDRALEVQDAL--IGEGNWKAVSLPDLIIAATAERHGATVLHYDGDYDMIAA  122

Query  123  ITGQPTEWIVPRG  135
            +TGQP  W+VPRG
Sbjct  123  VTGQPMRWVVPRG  135


>gi|302544584|ref|ZP_07296926.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
hygroscopicus ATCC 53653]
 gi|302462202|gb|EFL25295.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
himastatinicus ATCC 53653]
Length=138

 Score = 85.1 bits (209),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 50/134 (38%), Positives = 73/134 (55%), Gaps = 2/134 (1%)

Query  3    FCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDGLA  62
            + +D SA   +ARP V            + +   V +EILYSA +A + D L   L G  
Sbjct  5    YLIDKSALARSARPAVRETLNPLHERGLLCVTGAVEVEILYSARNANEADRLGRWLTGFD  64

Query  63   RIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVAA  122
             +P   E +  A  +QR+   +A  +HR+  +ADL+IAA A+  G  V HYD +YD++AA
Sbjct  65   YLPCPDEVWDAALDIQRQA--IAKGNHRAFSMADLLIAATAQRHGATVLHYDGDYDQIAA  122

Query  123  ITGQPTEWIVPRGT  136
            ITG P+ W+   GT
Sbjct  123  ITGYPSRWVAEPGT  136


>gi|290958509|ref|YP_003489691.1| hypothetical protein SCAB_40681 [Streptomyces scabiei 87.22]
 gi|260648035|emb|CBG71143.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length=139

 Score = 84.0 bits (206),  Expect = 6e-15, Method: Compositional matrix adjust.
 Identities = 46/134 (35%), Positives = 75/134 (56%), Gaps = 2/134 (1%)

Query  3    FCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDGLA  62
            + +D SA     +P V            + +C     E+++SA  +++   ++  L    
Sbjct  5    YLIDKSALARWTKPSVKEVLKPLHERYLLAVCQPTEFEMIHSARDSSEATRISTWLHAFD  64

Query  63   RIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVAA  122
             +    +TFTRA ++QR  A  AG H R++ + DL+IAA AEL+   V HYD ++D +A+
Sbjct  65   YLRTDDDTFTRALEIQRH-ALNAGFH-RALSLPDLLIAATAELNRRTVLHYDGDFDMIAS  122

Query  123  ITGQPTEWIVPRGT  136
            +TGQPTEW+VP G+
Sbjct  123  LTGQPTEWVVPPGS  136


>gi|167968774|ref|ZP_02551051.1| hypothetical protein MtubH3_12355 [Mycobacterium tuberculosis 
H37Ra]
 gi|253797151|ref|YP_003030152.1| toxin [Mycobacterium tuberculosis KZN 1435]
 gi|308231499|ref|ZP_07412656.2| toxin [Mycobacterium tuberculosis SUMu001]
 27 more sequence titles
 Length=137

 Score = 83.2 bits (204),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 52/137 (38%), Positives = 70/137 (52%), Gaps = 3/137 (2%)

Query  1    MVFCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDG  60
            + + +DTS     +RP V R       A  +       LE+ YSA + T++  L   L  
Sbjct  3    LKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVALSA  62

Query  61   LARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRV  120
               I   A    RA  +QR LA       R  KI DL+IAAA E  G +V HYD ++D +
Sbjct  63   FDLIESTASHHRRALGIQRLLA---ARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLI  119

Query  121  AAITGQPTEWIVPRGTL  137
            AA+TGQP +WIVP GT+
Sbjct  120  AAVTGQPCQWIVPAGTI  136


>gi|291452355|ref|ZP_06591745.1| conserved hypothetical protein [Streptomyces albus J1074]
 gi|291355304|gb|EFE82206.1| conserved hypothetical protein [Streptomyces albus J1074]
Length=135

 Score = 82.8 bits (203),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 49/129 (38%), Positives = 66/129 (52%), Gaps = 2/129 (1%)

Query  3    FCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDGLA  62
            + +DTSA     +  V R W   + A  + +CD   LE+LYSA S +D DA+ D L    
Sbjct  6    YLIDTSALVRVLQRRVPREWEHRIGAGLVSLCDLTELELLYSARSTSDRDAIRDRLSLFT  65

Query  63   RIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVAA  122
              P+    F RA  VQ  L       HRS    DL++AA AE SG  + H+D +++ VA 
Sbjct  66   WCPMPDGVFRRARTVQALLTDKG--EHRSAGAVDLLLAATAEQSGLTLLHHDRDFETVAR  123

Query  123  ITGQPTEWI  131
             TGQP   I
Sbjct  124  ATGQPVRMI  132


>gi|289572808|ref|ZP_06453035.1| toxin [Mycobacterium tuberculosis K85]
 gi|289537239|gb|EFD41817.1| toxin [Mycobacterium tuberculosis K85]
Length=547

 Score = 82.4 bits (202),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 52/137 (38%), Positives = 71/137 (52%), Gaps = 3/137 (2%)

Query  1    MVFCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDG  60
            + + +DTS     +RP V R       A  +       LE+ YSA + T++  L   L  
Sbjct  413  LKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVALSA  472

Query  61   LARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRV  120
               I   A    RA  +QR LA  +    R  KI DL+IAAA E  G +V HYD ++D +
Sbjct  473  FDLIESTASHHRRALGIQRLLAARS---QRGRKIPDLLIAAAGEEHGLVVLHYDADFDLI  529

Query  121  AAITGQPTEWIVPRGTL  137
            AA+TGQP +WIVP GT+
Sbjct  530  AAVTGQPCQWIVPAGTI  546


>gi|15607370|ref|NP_214743.1| hypothetical protein Rv0229c [Mycobacterium tuberculosis H37Rv]
 gi|15839609|ref|NP_334646.1| hypothetical protein MT0239 [Mycobacterium tuberculosis CDC1551]
 gi|31791406|ref|NP_853899.1| hypothetical protein Mb0234c [Mycobacterium bovis AF2122/97]
 42 more sequence titles
 Length=226

 Score = 82.4 bits (202),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 52/137 (38%), Positives = 70/137 (52%), Gaps = 3/137 (2%)

Query  1    MVFCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDG  60
            + + +DTS     +RP V R       A  +       LE+ YSA + T++  L   L  
Sbjct  92   LKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYSARNETEWQRLMVALSA  151

Query  61   LARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRV  120
               I   A    RA  +QR LA       R  KI DL+IAAA E  G +V HYD ++D +
Sbjct  152  FDLIESTASHHRRALGIQRLLA---ARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLI  208

Query  121  AAITGQPTEWIVPRGTL  137
            AA+TGQP +WIVP GT+
Sbjct  209  AAVTGQPCQWIVPAGTI  225


>gi|302534504|ref|ZP_07286846.1| predicted protein [Streptomyces sp. C]
 gi|302443399|gb|EFL15215.1| predicted protein [Streptomyces sp. C]
Length=140

 Score = 82.0 bits (201),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 55/139 (40%), Positives = 73/139 (53%), Gaps = 8/139 (5%)

Query  1    MVFCVDTSAWHHAARPEVARR-WLAALSADQIGICDHVRLEILYSANSATD---YDALAD  56
            + + +DTSA       E  R+ W   L+   IGIC+   LEIL+SA S  D    +AL  
Sbjct  4    VTYLIDTSAVVRVLTNEDVRKAWRDHLAEGVIGICEVTELEILFSAKSLADRLEKEALLG  63

Query  57   ELDGLARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDEN  116
            EL      PV    + RA  VQR L       HRS    DL++AA AEL+G  + HYD++
Sbjct  64   EL--FNWTPVPESVYVRARAVQRLLTGRG--EHRSAGPVDLLVAATAELTGLTLLHYDKD  119

Query  117  YDRVAAITGQPTEWIVPRG  135
            +D +A  TGQPT W+   G
Sbjct  120  FDAIARATGQPTRWVARPG  138


>gi|302557955|ref|ZP_07310297.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
griseoflavus Tu4000]
 gi|302475573|gb|EFL38666.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
griseoflavus Tu4000]
Length=136

 Score = 81.6 bits (200),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 49/136 (37%), Positives = 72/136 (53%), Gaps = 2/136 (1%)

Query  1    MVFCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDG  60
            M + +D SA    A+P V       +    + +   V +EILYSA +  +   L   L G
Sbjct  1    MRYLIDKSALARRAKPAVRGVLDPLIQRGLLAVTGAVEMEILYSARNPAEAGKLRYWLAG  60

Query  61   LARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRV  120
               +P   E + RA  VQ +       +HR++ +ADL+IAA AE  G  V HYDE+Y+++
Sbjct  61   FDYLPCPDECWDRAKDVQAQATRTG--NHRALSMADLLIAATAERHGVRVLHYDEDYEQI  118

Query  121  AAITGQPTEWIVPRGT  136
            A +TGQ  EW+ P GT
Sbjct  119  AELTGQAHEWVAPAGT  134


>gi|343479040|gb|AEM44209.1| hypothetical protein [uncultured bacterium]
Length=139

 Score = 81.6 bits (200),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 45/134 (34%), Positives = 73/134 (55%), Gaps = 2/134 (1%)

Query  3    FCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDGLA  62
            + +D SA     +P V            + +C     E+++SA   ++   ++  L    
Sbjct  5    YLIDKSALARWTKPSVKEVLKPLHERYLLAVCQPTEFEMIHSARDGSEATRISTWLHAFD  64

Query  63   RIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVAA  122
             +    +TF RA ++QR  A  AG H R++ + DL+IAA AEL+   V HYD ++D +A+
Sbjct  65   YLRTDDDTFIRALEIQRH-ALNAGFH-RALSLPDLLIAATAELNRRTVLHYDGDFDMIAS  122

Query  123  ITGQPTEWIVPRGT  136
            +TGQPTEW+VP G+
Sbjct  123  LTGQPTEWVVPPGS  136


>gi|289445761|ref|ZP_06435505.1| toxin [Mycobacterium tuberculosis CPHL_A]
 gi|289418719|gb|EFD15920.1| toxin [Mycobacterium tuberculosis CPHL_A]
Length=226

 Score = 80.9 bits (198),  Expect = 6e-14, Method: Compositional matrix adjust.
 Identities = 51/137 (38%), Positives = 69/137 (51%), Gaps = 3/137 (2%)

Query  1    MVFCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDG  60
            + + +DTS     +RP V R       A  +       LE+ Y A + T++  L   L  
Sbjct  92   LKYLLDTSVIKRLSRPAVRRAVEPLAEAGAVARTQITDLEVGYPARNETEWQRLMVALSA  151

Query  61   LARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRV  120
               I   A    RA  +QR LA       R  KI DL+IAAA E  G +V HYD ++D +
Sbjct  152  FDLIESTASHHRRALGIQRLLA---ARSQRGRKIPDLLIAAAGEEHGLVVLHYDADFDLI  208

Query  121  AAITGQPTEWIVPRGTL  137
            AA+TGQP +WIVP GT+
Sbjct  209  AAVTGQPCQWIVPAGTI  225


>gi|297163315|gb|ADI13027.1| PilT protein domain protein [Streptomyces bingchenggensis BCW-1]
Length=140

 Score = 80.5 bits (197),  Expect = 8e-14, Method: Compositional matrix adjust.
 Identities = 49/137 (36%), Positives = 72/137 (53%), Gaps = 4/137 (2%)

Query  3    FCVDTSAWHHAAR-PEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADEL-DG  60
            F +DTSA +   R P V R W   L   ++ +C+   LE++ +     ++  L   L D 
Sbjct  5    FLIDTSACNRLFRTPAVERHWATVLDEGRVTVCEITELELVRATGGRGEWAVLERYLHDA  64

Query  61   LARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRV  120
                PV     TRA  VQ  L  VA   H+  +  DL+ AA AEL G  + HYD +++ +
Sbjct  65   FGWPPVPDRALTRARHVQDLL--VATSWHQGPRAVDLMTAATAELCGLTLLHYDADFETI  122

Query  121  AAITGQPTEWIVPRGTL  137
            A +TGQP +WI PRG++
Sbjct  123  AKVTGQPHQWIAPRGSV  139


>gi|302546829|ref|ZP_07299171.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
hygroscopicus ATCC 53653]
 gi|302464447|gb|EFL27540.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
himastatinicus ATCC 53653]
Length=140

 Score = 79.7 bits (195),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 49/137 (36%), Positives = 71/137 (52%), Gaps = 4/137 (2%)

Query  3    FCVDTSAWHHAAR-PEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADEL-DG  60
            + +DTSA +   R P V R W   L   ++ +C+   LE++ +     +   L   L D 
Sbjct  5    YLIDTSACNRLFRSPAVERHWAGILDEGRVAVCEITELELVRATGGRDERAVLERYLHDA  64

Query  61   LARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRV  120
                PV     TRA QVQ  L  VA   H+     DL+ AA AEL G  + HYD +++ +
Sbjct  65   FGWTPVPDRALTRARQVQDLL--VATSWHQGPGAVDLMTAATAELCGLTLLHYDADFETI  122

Query  121  AAITGQPTEWIVPRGTL  137
            A +TGQP +WI PRG++
Sbjct  123  AKVTGQPHQWIAPRGSI  139


>gi|213649389|ref|ZP_03379442.1| hypothetical protein SentesTy_20112 [Salmonella enterica subsp. 
enterica serovar Typhi str. J185]
Length=36

 Score = 78.6 bits (192),  Expect = 3e-13, Method: Compositional matrix adjust.
 Identities = 36/36 (100%), Positives = 36/36 (100%), Gaps = 0/36 (0%)

Query  102  AAELSGTIVWHYDENYDRVAAITGQPTEWIVPRGTL  137
            AAELSGTIVWHYDENYDRVAAITGQPTEWIVPRGTL
Sbjct  1    AAELSGTIVWHYDENYDRVAAITGQPTEWIVPRGTL  36


>gi|302869194|ref|YP_003837831.1| PilT protein domain-containing protein [Micromonospora aurantiaca 
ATCC 27029]
 gi|302572053|gb|ADL48255.1| PilT protein domain protein [Micromonospora aurantiaca ATCC 27029]
Length=139

 Score = 78.2 bits (191),  Expect = 4e-13, Method: Compositional matrix adjust.
 Identities = 46/133 (35%), Positives = 71/133 (54%), Gaps = 2/133 (1%)

Query  3    FCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDGLA  62
            + +D SA     +P VA           + +C  + +E+++SA SA D       L G  
Sbjct  6    YLLDKSALARWPKPAVAPVLDELSDRGLLAVCGAIEIEVIHSARSAKDAKRARWLLRGFD  65

Query  63   RIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVAA  122
             + +  + + RA  +Q +  H    +HR++ +ADL+IAA AE  G  V HYD ++D + A
Sbjct  66   WLAMPDDIWDRAIDIQVQTLHKG--NHRALSMADLLIAATAERHGVTVLHYDGDFDLITA  123

Query  123  ITGQPTEWIVPRG  135
            ITGQPT W+VP G
Sbjct  124  ITGQPTTWVVPAG  136


>gi|15609894|ref|NP_217273.1| hypothetical protein Rv2757c [Mycobacterium tuberculosis H37Rv]
 gi|15842295|ref|NP_337332.1| hypothetical protein MT2827 [Mycobacterium tuberculosis CDC1551]
 gi|31793931|ref|NP_856424.1| hypothetical protein Mb2778c [Mycobacterium bovis AF2122/97]
 77 more sequence titles
 Length=138

 Score = 77.8 bits (190),  Expect = 5e-13, Method: Compositional matrix adjust.
 Identities = 51/135 (38%), Positives = 68/135 (51%), Gaps = 3/135 (2%)

Query  3    FCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALAD-ELDGL  61
            + +D SA + A  P V  R    +    +  C    LE   SA S  D+  L     D L
Sbjct  5    YLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDAL  64

Query  62   ARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVA  121
              +      + RA ++Q  L       HRSVKI DL+IAA AE  G  V HYD++++R+A
Sbjct  65   EYVNTPDTVWVRAWEIQEALTDKG--FHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIA  122

Query  122  AITGQPTEWIVPRGT  136
            AIT QP EW+V  GT
Sbjct  123  AITRQPVEWVVAPGT  137


>gi|315504329|ref|YP_004083216.1| pilt protein domain-containing protein [Micromonospora sp. L5]
 gi|315410948|gb|ADU09065.1| PilT protein domain protein [Micromonospora sp. L5]
Length=139

 Score = 77.4 bits (189),  Expect = 6e-13, Method: Compositional matrix adjust.
 Identities = 46/133 (35%), Positives = 71/133 (54%), Gaps = 2/133 (1%)

Query  3    FCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDGLA  62
            + +D SA     +P VA           + +C  + +E+++SA SA D       L G  
Sbjct  6    YLLDKSALARWPKPAVAPVLDELSDRGLLAVCGAIEIEVVHSARSAKDAKRARWLLRGFD  65

Query  63   RIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVAA  122
             + +  + + RA  +Q +  H    +HR++ +ADL+IAA AE  G  V HYD ++D + A
Sbjct  66   WLAMPDDIWDRAIDIQVQALHKG--NHRALSMADLLIAATAERHGVTVLHYDGDFDLITA  123

Query  123  ITGQPTEWIVPRG  135
            ITGQPT W+VP G
Sbjct  124  ITGQPTTWVVPAG  136


>gi|340627758|ref|YP_004746210.1| hypothetical protein MCAN_27841 [Mycobacterium canettii CIPT 
140010059]
 gi|340005948|emb|CCC45115.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=138

 Score = 77.4 bits (189),  Expect = 7e-13, Method: Compositional matrix adjust.
 Identities = 51/135 (38%), Positives = 68/135 (51%), Gaps = 3/135 (2%)

Query  3    FCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALAD-ELDGL  61
            + +D SA + A  P V  R    +    +  C    LE   SA S  D+  L     D L
Sbjct  5    YLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDAL  64

Query  62   ARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVA  121
              +      + RA ++Q  L       HRSVKI DL+IAA AE  G  V HYD++++R+A
Sbjct  65   EYVNTPDTVWDRAWEIQEALTDKG--FHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIA  122

Query  122  AITGQPTEWIVPRGT  136
            AIT QP EW+V  GT
Sbjct  123  AITRQPVEWVVAPGT  137


>gi|239988547|ref|ZP_04709211.1| hypothetical protein SrosN1_14659 [Streptomyces roseosporus NRRL 
11379]
 gi|291445528|ref|ZP_06584918.1| PilT protein domain-containing protein [Streptomyces roseosporus 
NRRL 15998]
 gi|291348475|gb|EFE75379.1| PilT protein domain-containing protein [Streptomyces roseosporus 
NRRL 15998]
Length=135

 Score = 77.0 bits (188),  Expect = 9e-13, Method: Compositional matrix adjust.
 Identities = 45/129 (35%), Positives = 66/129 (52%), Gaps = 2/129 (1%)

Query  3    FCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDGLA  62
            + +DTSA       +    W   +SA  + +CD   LE+LYSA S  D + + + L    
Sbjct  6    YLIDTSALARILLRQSTEDWTRRISAGLVALCDLTELELLYSARSTEDREKVRERLALYT  65

Query  63   RIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVAA  122
              P+    F RA  VQ +L   A   HR+    DL++AA AE SG  + HYD +++ +A 
Sbjct  66   WCPMPDGVFRRARTVQDQL--TAKGEHRNAGPVDLLLAATAEQSGLTLLHYDRDFETIAR  123

Query  123  ITGQPTEWI  131
             TGQPT  +
Sbjct  124  TTGQPTRML  132


>gi|308378090|ref|ZP_07668665.1| putative type I restriction-modification system, M subunit [Mycobacterium 
tuberculosis SUMu009]
 gi|308353571|gb|EFP42422.1| putative type I restriction-modification system, M subunit [Mycobacterium 
tuberculosis SUMu009]
Length=718

 Score = 75.9 bits (185),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 51/137 (38%), Positives = 70/137 (52%), Gaps = 4/137 (2%)

Query  3    FCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALAD-ELDGL  61
            + +D SA + A  P V  R    +    +  C    LE   SA S  D+  L     D L
Sbjct  15   YLLDKSAAYRAHLPAVRHRLEPLMERGLLARCGITDLEFGVSARSREDHRTLGTYRRDAL  74

Query  62   ARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVA  121
              +      + RA ++Q  L       HRSVKI DL+IAA AE  G  V HYD++++R+A
Sbjct  75   EYVNTPDTVWVRAWEIQEALTDKG--FHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIA  132

Query  122  AITGQPTEWIV-PRGTL  137
            AIT QP EW+V PR ++
Sbjct  133  AITRQPVEWVVAPRDSV  149


>gi|289748705|ref|ZP_06508083.1| LOW QUALITY PROTEIN: conserved membrane protein [Mycobacterium 
tuberculosis T92]
 gi|289689292|gb|EFD56721.1| LOW QUALITY PROTEIN: conserved membrane protein [Mycobacterium 
tuberculosis T92]
Length=126

 Score = 75.9 bits (185),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 44/99 (45%), Positives = 57/99 (58%), Gaps = 3/99 (3%)

Query  39   LEILYSANSATDYDALADELDGLARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLV  98
            LE+ YSA + T++  L   L     I   A    RA  +QR LA       R  KI DL+
Sbjct  30   LEVGYSARNETEWQRLMVALSAFDLIESTASHHRRALGIQRLLA---ARSQRGRKIPDLL  86

Query  99   IAAAAELSGTIVWHYDENYDRVAAITGQPTEWIVPRGTL  137
            IAAA E  G +V HYD ++D +AA+TGQP +WIVP GT+
Sbjct  87   IAAAGEEHGLVVLHYDADFDLIAAVTGQPCQWIVPAGTI  125


>gi|284045212|ref|YP_003395552.1| PilT protein domain protein [Conexibacter woesei DSM 14684]
 gi|283949433|gb|ADB52177.1| PilT protein domain protein [Conexibacter woesei DSM 14684]
Length=148

 Score = 75.1 bits (183),  Expect = 3e-12, Method: Compositional matrix adjust.
 Identities = 49/132 (38%), Positives = 70/132 (54%), Gaps = 1/132 (0%)

Query  6    DTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDGLARIP  65
            DTSA   A    V  +W  A+SA QI  C  V+LE+ ++A  A   +A+  E      IP
Sbjct  17   DTSARLRARSGIVVAQWQRAVSARQITTCPVVKLELFHTARDANAVEAIEVEERAFRSIP  76

Query  66   VGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVAAITG  125
            +       A    RELA   G +HR V + D++IAAAA+  G  V HYD ++DR+A +  
Sbjct  77   ITRSVQNAAIGAVRELARRGGGYHR-VSLPDVLIAAAAQDVGADVLHYDRHFDRLAEVLH  135

Query  126  QPTEWIVPRGTL  137
              + W+ P G+L
Sbjct  136  FRSIWLAPAGSL  147


>gi|302559325|ref|ZP_07311667.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
griseoflavus Tu4000]
 gi|302476943|gb|EFL40036.1| PIN family toxin-antitoxin system, toxin component [Streptomyces 
griseoflavus Tu4000]
Length=139

 Score = 74.3 bits (181),  Expect = 5e-12, Method: Compositional matrix adjust.
 Identities = 43/134 (33%), Positives = 71/134 (53%), Gaps = 2/134 (1%)

Query  3    FCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDGLA  62
            + +D SA     +P V            + +C     E+++SA  +++   ++  L    
Sbjct  5    YLIDKSALARWTKPSVKEVLKPLHERYLLAVCQPTEYEMIHSARDSSEATRISTWLHAFD  64

Query  63   RIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVAA  122
             +    + FTRA ++QR  A  AG H R++ + DL+IAA AEL    V HYD ++D +A+
Sbjct  65   YLRTDDDVFTRALEIQRH-ALNAGFH-RALSLPDLLIAATAELHRRTVLHYDGDFDMIAS  122

Query  123  ITGQPTEWIVPRGT  136
            +TGQP EW+V  G+
Sbjct  123  LTGQPAEWVVAPGS  136


>gi|269124363|ref|YP_003297733.1| PilT protein domain-containing protein [Thermomonospora curvata 
DSM 43183]
 gi|268309321|gb|ACY95695.1| PilT protein domain protein [Thermomonospora curvata DSM 43183]
Length=136

 Score = 69.7 bits (169),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 51/132 (39%), Positives = 74/132 (57%), Gaps = 4/132 (3%)

Query  3    FCVDTSAWHHA-ARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADEL-DG  60
            F  DTSA+H     P +AR W   L A  + +C    +EI YSA S+ DY+ ++  L + 
Sbjct  6    FLADTSAFHRLDGIPAIARNWEDQLRAGLVSVCPVTEIEIFYSARSSRDYERVSARLREV  65

Query  61   LARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRV  120
               +PV    F RA +VQ   A +A   HRS  +ADL++AA AE     V H D+++D +
Sbjct  66   FGWVPVPERAFQRALEVQE--AMLAQGTHRSAGLADLLLAATAEEYRLTVLHDDKDFDCI  123

Query  121  AAITGQPTEWIV  132
            AA+TGQP   ++
Sbjct  124  AAVTGQPVRRVL  135


>gi|158318849|ref|YP_001511357.1| PilT domain-containing protein [Frankia sp. EAN1pec]
 gi|158114254|gb|ABW16451.1| PilT protein domain protein [Frankia sp. EAN1pec]
Length=159

 Score = 68.9 bits (167),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 50/135 (38%), Positives = 72/135 (54%), Gaps = 14/135 (10%)

Query  7    TSAWHHAARPEVARR------WLAALSADQIGICDHVRLEILYSANSATDYDA-LADELD  59
            T+  H   RP  A R      WL+ +    I I     LE+ +SA SA D    L   L 
Sbjct  26   TALAHRQVRPRPAERDPDADRWLSHIQHGLIRITTVTILEVGFSARSAQDLRVRLRRSL-  84

Query  60   GLARIPVGAETF---TRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDEN  116
             ++ +PV   T     RA ++Q  LA     HHR+  + DL+IAA AEL+G +V H D++
Sbjct  85   -VSAMPVENTTPRIEARAVEIQELLASTG--HHRAPSVPDLIIAATAELAGLVVLHVDKD  141

Query  117  YDRVAAITGQPTEWI  131
            ++ +AA+TGQPTE +
Sbjct  142  FELIAALTGQPTERL  156


>gi|254549168|ref|ZP_05139615.1| hypothetical protein Mtube_01671 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
Length=71

 Score = 64.3 bits (155),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 32/61 (53%), Positives = 42/61 (69%), Gaps = 3/61 (4%)

Query  77   VQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVAAITGQPTEWIVPRGT  136
            +QR LA  +    R  KI DL+IAAA E  G +V HYD ++D +AA+TGQP +WIVP GT
Sbjct  13   IQRLLAARS---QRGRKIPDLLIAAAGEEHGLVVLHYDADFDLIAAVTGQPCQWIVPAGT  69

Query  137  L  137
            +
Sbjct  70   I  70


>gi|340627542|ref|YP_004745994.1| hypothetical protein MCAN_25671 [Mycobacterium canettii CIPT 
140010059]
 gi|340005732|emb|CCC44898.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=133

 Score = 63.9 bits (154),  Expect = 8e-09, Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 1/100 (1%)

Query  24   AALSADQIGICDHVRLEILYSANSATDYDALADELDGLARIPVGAETFTRACQVQRELAH  83
            A +    + ICD   LE LYSA SATDYD+    L     +   ++ F R   +QR+LAH
Sbjct  22   AGIDLTDLAICDIGELEWLYSARSATDYDSQQTSLRAYQILRAPSDIFDRVRHLQRDLAH  81

Query  84   VAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVAAI  123
              G+ HR+  + DL IA  A      V H+D +Y R+AA+
Sbjct  82   HRGMWHRT-PLPDLFIAETAIHHRAGVLHHDRDYKRIAAV  120


>gi|15609664|ref|NP_217043.1| hypothetical protein Rv2527 [Mycobacterium tuberculosis H37Rv]
 gi|15842061|ref|NP_337098.1| hypothetical protein MT2602 [Mycobacterium tuberculosis CDC1551]
 gi|31793708|ref|NP_856201.1| hypothetical protein Mb2556 [Mycobacterium bovis AF2122/97]
 53 more sequence titles
 Length=133

 Score = 62.8 bits (151),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 1/100 (1%)

Query  24   AALSADQIGICDHVRLEILYSANSATDYDALADELDGLARIPVGAETFTRACQVQRELAH  83
            A +    + ICD   LE LYSA SATDYD+    L     +   ++ F R   +QR+LAH
Sbjct  22   AGIDLTDLAICDIGELEWLYSARSATDYDSQQTSLRAYQILRAPSDIFDRVRHLQRDLAH  81

Query  84   VAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVAAI  123
              G+ HR+  + DL IA  A      V H+D +Y R+A +
Sbjct  82   HRGMWHRT-PLPDLFIAETALHHRAGVLHHDRDYKRIAVV  120


>gi|167967328|ref|ZP_02549605.1| hypothetical protein MtubH3_04542 [Mycobacterium tuberculosis 
H37Ra]
 gi|254551575|ref|ZP_05142022.1| toxin [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|308232164|ref|ZP_07415137.2| toxin [Mycobacterium tuberculosis SUMu001]
 21 more sequence titles
 Length=135

 Score = 62.8 bits (151),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 1/100 (1%)

Query  24   AALSADQIGICDHVRLEILYSANSATDYDALADELDGLARIPVGAETFTRACQVQRELAH  83
            A +    + ICD   LE LYSA SATDYD+    L     +   ++ F R   +QR+LAH
Sbjct  24   AGIDLTDLAICDIGELEWLYSARSATDYDSQQTSLRAYQILRAPSDIFDRVRHLQRDLAH  83

Query  84   VAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVAAI  123
              G+ HR+  + DL IA  A      V H+D +Y R+A +
Sbjct  84   HRGMWHRT-PLPDLFIAETALHHRAGVLHHDRDYKRIAVV  122


>gi|333992736|ref|YP_004525350.1| hypothetical protein JDM601_4096 [Mycobacterium sp. JDM601]
 gi|333488704|gb|AEF38096.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=131

 Score = 60.1 bits (144),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 35/94 (38%), Positives = 52/94 (56%), Gaps = 2/94 (2%)

Query  31   IGICDHVRLEILYSANSATDYDALADEL-DGLARIPVGAETFTRACQVQRELAHVAGLHH  89
            + +C+   LE LYSA S  DYD+ +  + D    +P  A+ F R  ++QR+LAH  G+ H
Sbjct  29   VALCEMSELEWLYSARSGADYDSQSAAVRDAYPVLPAPADIFDRVRRLQRDLAHHRGMWH  88

Query  90   RSVKIADLVIAAAAELSGTIVWHYDENYDRVAAI  123
            R+  + DL IA  A   G  V H D +Y R+  +
Sbjct  89   RT-PLPDLFIAETALHHGAGVLHRDRDYQRIRKV  121


>gi|240172880|ref|ZP_04751539.1| hypothetical protein MkanA1_26442 [Mycobacterium kansasii ATCC 
12478]
Length=140

 Score = 59.7 bits (143),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 42/135 (32%), Positives = 64/135 (48%), Gaps = 3/135 (2%)

Query  4    CVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDAL-ADELDGLA  62
             +DTSA      PEVA R    + A  +     +  E LYSA +  DY+ L +D      
Sbjct  8    LIDTSAAARMTHPEVAARLAPLIEAGLVATTAQLDAEALYSARNPADYEQLWSDRRAAYE  67

Query  63   RIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVAA  122
             +P   E +  A   QR+LA      HR+V +ADL+IA  A      + HYD +++  A 
Sbjct  68   YLPTNDEHWQTALGAQRKLASTG--RHRAVGMADLLIATLAAAHDMTLIHYDADFEIAAE  125

Query  123  ITGQPTEWIVPRGTL  137
            +     +W++ R T+
Sbjct  126  VLPFRHQWVLERDTI  140


>gi|328882585|emb|CCA55824.1| hypothetical protein SVEN_2538 [Streptomyces venezuelae ATCC 
10712]
Length=138

 Score = 59.7 bits (143),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 40/127 (32%), Positives = 64/127 (51%), Gaps = 8/127 (6%)

Query  1    MVFCVDTSAW-HHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELD  59
            + + VDTSA+ H    P   RRW A +    IG+C+  R E+L+SA +A D +A+ ++L 
Sbjct  2    ITYLVDTSAYVHLGTDPAAQRRWDAEIETGAIGMCEATRTELLFSAVNADDREAIEEDLA  61

Query  60   GL---ARIPVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDEN  116
             +    R+P  A  +  + Q +          HR+  + DL+I A A   G  V H D +
Sbjct  62   AMFAPVRVPKDAWRWVESAQYKL----TQKGQHRAAGVIDLLICATAVHHGLTVLHRDND  117

Query  117  YDRVAAI  123
            +  VA +
Sbjct  118  FATVARV  124


>gi|284044239|ref|YP_003394579.1| PilT protein domain protein [Conexibacter woesei DSM 14684]
 gi|283948460|gb|ADB51204.1| PilT protein domain protein [Conexibacter woesei DSM 14684]
Length=141

 Score = 58.5 bits (140),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 44/135 (33%), Positives = 62/135 (46%), Gaps = 12/135 (8%)

Query  3    FCVDTSAWHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELDGLA  62
            + +D SA     R   +  W   +    + I     LE+ YSA  A D  A      GL 
Sbjct  10   WLIDKSALVRLGRSPDSELWAGRIERRLVRIATVTLLEVGYSARDAEDLRA------GLR  63

Query  63   RIPVGAETFTRACQVQRELA-HVAGL-----HHRSVKIADLVIAAAAELSGTIVWHYDEN  116
            + PV +           + A  V GL     HHR+  + DL+IAA AE +G  + H D+ 
Sbjct  64   QPPVASMPVEYMAPASEDRAVEVLGLLADRGHHRAPSVPDLLIAAIAERAGLALLHQDKA  123

Query  117  YDRVAAITGQPTEWI  131
            +D +A ITGQPTE +
Sbjct  124  FDLIAEITGQPTERL  138


>gi|229598010|pdb|3H87|A Chain A, Rv0301 Rv0300 Toxin Antitoxin Complex From Mycobacterium 
Tuberculosis
 gi|229598011|pdb|3H87|B Chain B, Rv0301 Rv0300 Toxin Antitoxin Complex From Mycobacterium 
Tuberculosis
Length=156

 Score = 57.8 bits (138),  Expect = 5e-07, Method: Compositional matrix adjust.
 Identities = 32/62 (52%), Positives = 40/62 (65%), Gaps = 2/62 (3%)

Query  73   RACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVAAITGQPTEWIV  132
            RA +VQ  LA     HHR   I DL+IAA AELSG  V H D+++D +AA+TGQ TE + 
Sbjct  93   RALEVQTLLADRG--HHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIAALTGQKTERLT  150

Query  133  PR  134
             R
Sbjct  151  HR  152


>gi|289748072|ref|ZP_06507450.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|308369360|ref|ZP_07417480.2| toxin [Mycobacterium tuberculosis SUMu002]
 gi|308372857|ref|ZP_07430154.2| toxin [Mycobacterium tuberculosis SUMu005]
 11 more sequence titles
 Length=143

 Score = 57.8 bits (138),  Expect = 6e-07, Method: Compositional matrix adjust.
 Identities = 32/62 (52%), Positives = 40/62 (65%), Gaps = 2/62 (3%)

Query  73   RACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVAAITGQPTEWIV  132
            RA +VQ  LA     HHR   I DL+IAA AELSG  V H D+++D +AA+TGQ TE + 
Sbjct  80   RALEVQTLLADRG--HHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIAALTGQKTERLT  137

Query  133  PR  134
             R
Sbjct  138  HR  139


>gi|15607442|ref|NP_214815.1| hypothetical protein Rv0301 [Mycobacterium tuberculosis H37Rv]
 gi|15839686|ref|NP_334723.1| hypothetical protein MT0314 [Mycobacterium tuberculosis CDC1551]
 gi|31791480|ref|NP_853973.1| hypothetical protein Mb0309 [Mycobacterium bovis AF2122/97]
 65 more sequence titles
 Length=141

 Score = 57.8 bits (138),  Expect = 6e-07, Method: Compositional matrix adjust.
 Identities = 32/62 (52%), Positives = 40/62 (65%), Gaps = 2/62 (3%)

Query  73   RACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYDRVAAITGQPTEWIV  132
            RA +VQ  LA     HHR   I DL+IAA AELSG  V H D+++D +AA+TGQ TE + 
Sbjct  78   RALEVQTLLADRG--HHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIAALTGQKTERLT  135

Query  133  PR  134
             R
Sbjct  136  HR  137


>gi|29832237|ref|NP_826871.1| hypothetical protein SAV_5694 [Streptomyces avermitilis MA-4680]
 gi|29609355|dbj|BAC73406.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length=135

 Score = 57.0 bits (136),  Expect = 9e-07, Method: Compositional matrix adjust.
 Identities = 41/125 (33%), Positives = 58/125 (47%), Gaps = 4/125 (3%)

Query  1    MVFCVDTSA-WHHAARPEVARRWLAALSADQIGICDHVRLEILYSANSATDYDALADELD  59
            + + +DTSA WH    P     W   ++A    +C+  R E LYSA S T  D LA+ELD
Sbjct  2    ITYLLDTSALWHLFRTPGALAPWEGHIAAGVFHLCEPTRAEFLYSATSPTHRDELAEELD  61

Query  60   GLARI-PVGAETFTRACQVQRELAHVAGLHHRSVKIADLVIAAAAELSGTIVWHYDENYD  118
             L  + PV    +      Q +L       HR+    DL++ A A   G  V H D ++ 
Sbjct  62   ALCLLSPVPKNAWRWVDTAQYKLTQQG--QHRAAGAIDLLVCATAVHHGHTVLHVDNDFA  119

Query  119  RVAAI  123
             VA +
Sbjct  120  TVAGV  124



Lambda     K      H
   0.322    0.133    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 128325363320


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40