BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2552c
Length=269
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609689|ref|NP_217068.1| shikimate 5-dehydrogenase [Mycobact... 528 4e-148
gi|289575258|ref|ZP_06455485.1| shikimate 5-dehydrogenase aroE [... 526 1e-147
gi|289570721|ref|ZP_06450948.1| LOW QUALITY PROTEIN: shikimate 5... 524 6e-147
gi|340627569|ref|YP_004746021.1| putative shikimate 5-dehydrogen... 522 3e-146
gi|167968837|ref|ZP_02551114.1| shikimate 5-dehydrogenase [Mycob... 521 3e-146
gi|161511531|ref|NP_856228.2| shikimate 5-dehydrogenase [Mycobac... 516 1e-144
gi|224990931|ref|YP_002645618.1| shikimate 5-dehydrogenase [Myco... 508 4e-142
gi|240170727|ref|ZP_04749386.1| shikimate 5-dehydrogenase [Mycob... 440 1e-121
gi|15827177|ref|NP_301440.1| shikimate 5-dehydrogenase [Mycobact... 436 1e-120
gi|229220809|ref|YP_882610.2| shikimate 5-dehydrogenase [Mycobac... 431 4e-119
gi|41407178|ref|NP_960014.1| shikimate 5-dehydrogenase [Mycobact... 429 2e-118
gi|183982186|ref|YP_001850477.1| shikimate 5-dehydrogenase AroE ... 426 2e-117
gi|118166288|gb|ABK67185.1| shikimate-5-dehydrogenase [Mycobacte... 422 2e-116
gi|254775874|ref|ZP_05217390.1| shikimate 5-dehydrogenase [Mycob... 422 3e-116
gi|118617377|ref|YP_905709.1| shikimate 5-dehydrogenase [Mycobac... 421 6e-116
gi|336461492|gb|EGO40360.1| shikimate-5-dehydrogenase, fungal AR... 419 2e-115
gi|254821809|ref|ZP_05226810.1| shikimate 5-dehydrogenase [Mycob... 413 1e-113
gi|296170780|ref|ZP_06852352.1| shikimate dehydrogenase [Mycobac... 398 4e-109
gi|108799316|ref|YP_639513.1| shikimate 5-dehydrogenase [Mycobac... 389 2e-106
gi|126434974|ref|YP_001070665.1| shikimate 5-dehydrogenase [Myco... 386 2e-105
gi|342858628|ref|ZP_08715283.1| shikimate 5-dehydrogenase [Mycob... 382 2e-104
gi|118473062|ref|YP_887345.1| shikimate 5-dehydrogenase [Mycobac... 358 4e-97
gi|333990978|ref|YP_004523592.1| shikimate 5-dehydrogenase AroE ... 342 3e-92
gi|315444674|ref|YP_004077553.1| shikimate dehydrogenase [Mycoba... 327 8e-88
gi|145224342|ref|YP_001135020.1| shikimate 5-dehydrogenase [Myco... 327 1e-87
gi|120403628|ref|YP_953457.1| shikimate 5-dehydrogenase [Mycobac... 317 2e-84
gi|226306475|ref|YP_002766435.1| shikimate dehydrogenase [Rhodoc... 302 3e-80
gi|111024088|ref|YP_707060.1| shikimate 5-dehydrogenase [Rhodoco... 300 2e-79
gi|333919512|ref|YP_004493093.1| Shikimate-5-dehydrogenase [Amyc... 294 1e-77
gi|226366328|ref|YP_002784111.1| shikimate 5-dehydrogenase [Rhod... 288 6e-76
gi|312139555|ref|YP_004006891.1| shikimate dehydrogenase aroe [R... 286 3e-75
gi|325672561|ref|ZP_08152257.1| shikimate dehydrogenase [Rhodoco... 285 5e-75
gi|169629932|ref|YP_001703581.1| shikimate 5-dehydrogenase [Myco... 280 2e-73
gi|229493503|ref|ZP_04387288.1| shikimate-5-dehydrogenase [Rhodo... 277 1e-72
gi|262202253|ref|YP_003273461.1| shikimate-5-dehydrogenase [Gord... 275 5e-72
gi|326382146|ref|ZP_08203838.1| shikimate 5-dehydrogenase [Gordo... 272 4e-71
gi|343924305|ref|ZP_08763856.1| shikimate dehydrogenase [Gordoni... 270 2e-70
gi|254551603|ref|ZP_05142050.1| shikimate 5-dehydrogenase [Mycob... 266 3e-69
gi|254551604|ref|ZP_05142051.1| shikimate 5-dehydrogenase [Mycob... 265 6e-69
gi|296394054|ref|YP_003658938.1| shikimate-5-dehydrogenase [Segn... 258 5e-67
gi|54025611|ref|YP_119853.1| shikimate 5-dehydrogenase [Nocardia... 258 5e-67
gi|225021336|ref|ZP_03710528.1| hypothetical protein CORMATOL_01... 248 7e-64
gi|213966149|ref|ZP_03394336.1| shikimate-5-dehydrogenase [Coryn... 248 1e-63
gi|306836210|ref|ZP_07469194.1| shikimate-5-dehydrogenase [Coryn... 244 1e-62
gi|255325068|ref|ZP_05366174.1| shikimate-5-dehydrogenase [Coryn... 241 8e-62
gi|227503539|ref|ZP_03933588.1| shikimate 5-dehydrogenase [Coryn... 238 5e-61
gi|145295751|ref|YP_001138572.1| shikimate 5-dehydrogenase [Cory... 237 2e-60
gi|227549182|ref|ZP_03979231.1| shikimate 5-dehydrogenase [Coryn... 236 2e-60
gi|302525840|ref|ZP_07278182.1| shikimate-5-dehydrogenase [Strep... 236 3e-60
gi|19552841|ref|NP_600843.1| shikimate 5-dehydrogenase [Coryneba... 236 3e-60
>gi|15609689|ref|NP_217068.1| shikimate 5-dehydrogenase [Mycobacterium tuberculosis H37Rv]
gi|15842090|ref|NP_337127.1| shikimate 5-dehydrogenase [Mycobacterium tuberculosis CDC1551]
gi|148662391|ref|YP_001283914.1| shikimate 5-dehydrogenase [Mycobacterium tuberculosis H37Ra]
53 more sequence titles
Length=269
Score = 528 bits (1359), Expect = 4e-148, Method: Compositional matrix adjust.
Identities = 269/269 (100%), Positives = 269/269 (100%), Gaps = 0/269 (0%)
Query 1 MSEGPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWV 60
MSEGPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWV
Sbjct 1 MSEGPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWV 60
Query 61 GVSVTMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHA 120
GVSVTMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHA
Sbjct 61 GVSVTMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHA 120
Query 121 LVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLAD 180
LVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLAD
Sbjct 121 LVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLAD 180
Query 181 AVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQML 240
AVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQML
Sbjct 181 AVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQML 240
Query 241 LHQAFAQVEQFTGLPAPREAMTCALAALD 269
LHQAFAQVEQFTGLPAPREAMTCALAALD
Sbjct 241 LHQAFAQVEQFTGLPAPREAMTCALAALD 269
>gi|289575258|ref|ZP_06455485.1| shikimate 5-dehydrogenase aroE [Mycobacterium tuberculosis K85]
gi|339632580|ref|YP_004724222.1| shikimate 5-dehydrogenase AROE (5-dehydroshikimate reductase)
[Mycobacterium africanum GM041182]
gi|289539689|gb|EFD44267.1| shikimate 5-dehydrogenase aroE [Mycobacterium tuberculosis K85]
gi|339331936|emb|CCC27639.1| putative shikimate 5-dehydrogenase AROE (5-dehydroshikimate reductase)
[Mycobacterium africanum GM041182]
Length=269
Score = 526 bits (1355), Expect = 1e-147, Method: Compositional matrix adjust.
Identities = 268/269 (99%), Positives = 269/269 (100%), Gaps = 0/269 (0%)
Query 1 MSEGPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWV 60
MSEGPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWV
Sbjct 1 MSEGPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWV 60
Query 61 GVSVTMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHA 120
GVSVTMPGKFAALRFADERTARADLVGSANTLVRTPHGW+ADNTDIDGVAGALGAAAGHA
Sbjct 61 GVSVTMPGKFAALRFADERTARADLVGSANTLVRTPHGWQADNTDIDGVAGALGAAAGHA 120
Query 121 LVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLAD 180
LVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLAD
Sbjct 121 LVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLAD 180
Query 181 AVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQML 240
AVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQML
Sbjct 181 AVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQML 240
Query 241 LHQAFAQVEQFTGLPAPREAMTCALAALD 269
LHQAFAQVEQFTGLPAPREAMTCALAALD
Sbjct 241 LHQAFAQVEQFTGLPAPREAMTCALAALD 269
>gi|289570721|ref|ZP_06450948.1| LOW QUALITY PROTEIN: shikimate 5-dehydrogenase aroE [Mycobacterium
tuberculosis T17]
gi|289544475|gb|EFD48123.1| LOW QUALITY PROTEIN: shikimate 5-dehydrogenase aroE [Mycobacterium
tuberculosis T17]
Length=267
Score = 524 bits (1349), Expect = 6e-147, Method: Compositional matrix adjust.
Identities = 267/267 (100%), Positives = 267/267 (100%), Gaps = 0/267 (0%)
Query 1 MSEGPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWV 60
MSEGPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWV
Sbjct 1 MSEGPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWV 60
Query 61 GVSVTMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHA 120
GVSVTMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHA
Sbjct 61 GVSVTMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHA 120
Query 121 LVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLAD 180
LVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLAD
Sbjct 121 LVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLAD 180
Query 181 AVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQML 240
AVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQML
Sbjct 181 AVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQML 240
Query 241 LHQAFAQVEQFTGLPAPREAMTCALAA 267
LHQAFAQVEQFTGLPAPREAMTCALAA
Sbjct 241 LHQAFAQVEQFTGLPAPREAMTCALAA 267
>gi|340627569|ref|YP_004746021.1| putative shikimate 5-dehydrogenase AROE (5-dehydroshikimate reductase)
[Mycobacterium canettii CIPT 140010059]
gi|340005759|emb|CCC44925.1| putative shikimate 5-dehydrogenase AROE (5-dehydroshikimate reductase)
[Mycobacterium canettii CIPT 140010059]
Length=269
Score = 522 bits (1344), Expect = 3e-146, Method: Compositional matrix adjust.
Identities = 265/269 (99%), Positives = 267/269 (99%), Gaps = 0/269 (0%)
Query 1 MSEGPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWV 60
MSEGPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWV
Sbjct 1 MSEGPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWV 60
Query 61 GVSVTMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHA 120
GVSVTMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHA
Sbjct 61 GVSVTMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHA 120
Query 121 LVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLAD 180
LVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGV TRFCAFDSGGLAD
Sbjct 121 LVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVVTRFCAFDSGGLAD 180
Query 181 AVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQML 240
AVAAAEVLVST+PAEVAA YAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQML
Sbjct 181 AVAAAEVLVSTVPAEVAARYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQML 240
Query 241 LHQAFAQVEQFTGLPAPREAMTCALAALD 269
LHQAFAQVEQFTGLPAPREAMTCA+AALD
Sbjct 241 LHQAFAQVEQFTGLPAPREAMTCAMAALD 269
>gi|167968837|ref|ZP_02551114.1| shikimate 5-dehydrogenase [Mycobacterium tuberculosis H37Ra]
Length=269
Score = 521 bits (1343), Expect = 3e-146, Method: Compositional matrix adjust.
Identities = 267/269 (99%), Positives = 267/269 (99%), Gaps = 0/269 (0%)
Query 1 MSEGPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWV 60
MSEGPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWV
Sbjct 1 MSEGPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWV 60
Query 61 GVSVTMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHA 120
GVSVTMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHA
Sbjct 61 GVSVTMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHA 120
Query 121 LVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLAD 180
LVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDL TRVGVATRFCAFDSGGLAD
Sbjct 121 LVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLCTRVGVATRFCAFDSGGLAD 180
Query 181 AVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQML 240
AVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQML
Sbjct 181 AVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQML 240
Query 241 LHQAFAQVEQFTGLPAPREAMTCALAALD 269
HQAFAQVEQFTGLPAPREAMTCALAALD
Sbjct 241 PHQAFAQVEQFTGLPAPREAMTCALAALD 269
>gi|161511531|ref|NP_856228.2| shikimate 5-dehydrogenase [Mycobacterium bovis AF2122/97]
gi|229576791|ref|YP_978661.2| shikimate 5-dehydrogenase [Mycobacterium bovis BCG str. Pasteur
1173P2]
Length=275
Score = 516 bits (1330), Expect = 1e-144, Method: Compositional matrix adjust.
Identities = 263/264 (99%), Positives = 264/264 (100%), Gaps = 0/264 (0%)
Query 6 KKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVT 65
+KAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVT
Sbjct 12 QKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVT 71
Query 66 MPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHALVLGS 125
MPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHALVLGS
Sbjct 72 MPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHALVLGS 131
Query 126 GGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLADAVAAA 185
GGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLADAVAAA
Sbjct 132 GGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLADAVAAA 191
Query 186 EVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQAF 245
EVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQAF
Sbjct 192 EVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQAF 251
Query 246 AQVEQFTGLPAPREAMTCALAALD 269
AQVEQFTGLPAPREAMTCALAALD
Sbjct 252 AQVEQFTGLPAPREAMTCALAALD 275
>gi|224990931|ref|YP_002645618.1| shikimate 5-dehydrogenase [Mycobacterium bovis BCG str. Tokyo
172]
gi|31619329|emb|CAD94767.1| PROBABLE SHIKIMATE 5-DEHYDROGENASE AROE (5-DEHYDROSHIKIMATE REDUCTASE)
[Mycobacterium bovis AF2122/97]
gi|121494085|emb|CAL72563.1| Probable shikimate 5-dehydrogenase aroE [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|224774044|dbj|BAH26850.1| shikimate 5-dehydrogenase [Mycobacterium bovis BCG str. Tokyo
172]
gi|341602475|emb|CCC65151.1| probable shikimate 5-dehydrogenase aroE [Mycobacterium bovis
BCG str. Moreau RDJ]
Length=260
Score = 508 bits (1308), Expect = 4e-142, Method: Compositional matrix adjust.
Identities = 259/260 (99%), Positives = 260/260 (100%), Gaps = 0/260 (0%)
Query 10 VLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVTMPGK 69
+LGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVTMPGK
Sbjct 1 MLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVTMPGK 60
Query 70 FAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHALVLGSGGTA 129
FAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHALVLGSGGTA
Sbjct 61 FAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHALVLGSGGTA 120
Query 130 PAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLADAVAAAEVLV 189
PAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLADAVAAAEVLV
Sbjct 121 PAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLADAVAAAEVLV 180
Query 190 STIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQAFAQVE 249
STIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQAFAQVE
Sbjct 181 STIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQAFAQVE 240
Query 250 QFTGLPAPREAMTCALAALD 269
QFTGLPAPREAMTCALAALD
Sbjct 241 QFTGLPAPREAMTCALAALD 260
>gi|240170727|ref|ZP_04749386.1| shikimate 5-dehydrogenase [Mycobacterium kansasii ATCC 12478]
Length=274
Score = 440 bits (1131), Expect = 1e-121, Method: Compositional matrix adjust.
Identities = 221/264 (84%), Positives = 237/264 (90%), Gaps = 0/264 (0%)
Query 6 KKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVT 65
+KAGVLGSPIAHSRSPQLHLAAYRALGL DWTYERIEC A +LP VVGGFGPEWVGVSVT
Sbjct 11 RKAGVLGSPIAHSRSPQLHLAAYRALGLDDWTYERIECTAEQLPAVVGGFGPEWVGVSVT 70
Query 66 MPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHALVLGS 125
MPGKFAALRFADERTARA+ VGSANTLVRTP GWRADNTDIDGV GALGAA+G A+VLGS
Sbjct 71 MPGKFAALRFADERTARAEQVGSANTLVRTPRGWRADNTDIDGVTGALGAASGDAVVLGS 130
Query 126 GGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLADAVAAA 185
GGTAPAAV+GLA+LGVT ITVVARN KAARLVDLGT+ GVA+RFCA D GL D VAAA
Sbjct 131 GGTAPAAVIGLAQLGVTGITVVARNPGKAARLVDLGTQAGVASRFCALDDAGLPDQVAAA 190
Query 186 EVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQAF 245
+VL+ST+PA+VAA Y LA +PVLLDAIY PWPTPLAAAV AGGR ISGLQMLLHQAF
Sbjct 191 QVLISTLPADVAARYIQALAGVPVLLDAIYHPWPTPLAAAVTDAGGRAISGLQMLLHQAF 250
Query 246 AQVEQFTGLPAPREAMTCALAALD 269
AQVEQFTG+PAPR+AMTCALA LD
Sbjct 251 AQVEQFTGMPAPRDAMTCALAELD 274
>gi|15827177|ref|NP_301440.1| shikimate 5-dehydrogenase [Mycobacterium leprae TN]
gi|221229655|ref|YP_002503071.1| shikimate 5-dehydrogenase [Mycobacterium leprae Br4923]
gi|13092725|emb|CAC30023.1| putative shikimate 5-dehydrogenase [Mycobacterium leprae]
gi|219932762|emb|CAR70608.1| putative shikimate 5-dehydrogenase [Mycobacterium leprae Br4923]
Length=278
Score = 436 bits (1122), Expect = 1e-120, Method: Compositional matrix adjust.
Identities = 220/270 (82%), Positives = 236/270 (88%), Gaps = 3/270 (1%)
Query 2 SEGPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVG 61
++GP+KAG++GSPIAHSRSP LHLAAYRAL LHDWTYERIEC A ELP VV GFGP+WVG
Sbjct 8 NKGPRKAGIIGSPIAHSRSPHLHLAAYRALRLHDWTYERIECDAEELPTVVSGFGPQWVG 67
Query 62 VSVTMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGAL---GAAAG 118
VSVTMPGKFAALRFADE TARA LVGSANTL+RT GWRADNTDIDGVAGAL G AG
Sbjct 68 VSVTMPGKFAALRFADEHTARASLVGSANTLLRTQRGWRADNTDIDGVAGALAAIGPLAG 127
Query 119 HALVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGL 178
ALV GSGGTAPAAV+GLAELGVTDITV+ARN DKA+RLVDLG +VGVATR C DSGGL
Sbjct 128 RALVCGSGGTAPAAVMGLAELGVTDITVLARNPDKASRLVDLGVQVGVATRLCGLDSGGL 187
Query 179 ADAVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQ 238
AD V AAEVLVST+PA+VAA Y A +PVLLDAIYDPWPTPL AAV +AGGRVISGLQ
Sbjct 188 ADEVKAAEVLVSTVPADVAARYVDVFATVPVLLDAIYDPWPTPLVAAVSAAGGRVISGLQ 247
Query 239 MLLHQAFAQVEQFTGLPAPREAMTCALAAL 268
MLLHQAFAQVEQFTG+PAPREAM CALA L
Sbjct 248 MLLHQAFAQVEQFTGMPAPREAMACALAGL 277
>gi|229220809|ref|YP_882610.2| shikimate 5-dehydrogenase [Mycobacterium avium 104]
Length=294
Score = 431 bits (1109), Expect = 4e-119, Method: Compositional matrix adjust.
Identities = 222/266 (84%), Positives = 234/266 (88%), Gaps = 0/266 (0%)
Query 4 GPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVS 63
GP++A VLG PIAHS+SPQLHLAAYRALGLHDWTYERIEC A +LP VVGGFGPEWVGVS
Sbjct 29 GPRRAAVLGKPIAHSKSPQLHLAAYRALGLHDWTYERIECDADQLPGVVGGFGPEWVGVS 88
Query 64 VTMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHALVL 123
VTMPGKFAALRFADERT RA VGSANTLVRT GWRADNTDIDGVAGALGAA+G ALV
Sbjct 89 VTMPGKFAALRFADERTERARRVGSANTLVRTATGWRADNTDIDGVAGALGAASGWALVC 148
Query 124 GSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLADAVA 183
GSGGTAPAAV GLA+LGV ITVVARN DKAARLV LG +GV TRFCA D GLAD VA
Sbjct 149 GSGGTAPAAVAGLAQLGVAGITVVARNPDKAARLVRLGDELGVPTRFCALDGAGLADEVA 208
Query 184 AAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQ 243
AAEVLVST+PAEVA YAGTLA + VLLDA+YDPWPTPLAAAV +AGGRVISG+QMLLHQ
Sbjct 209 AAEVLVSTLPAEVAERYAGTLARVGVLLDAVYDPWPTPLAAAVSAAGGRVISGMQMLLHQ 268
Query 244 AFAQVEQFTGLPAPREAMTCALAALD 269
AFAQVEQFTGLPAPREAMTCA A D
Sbjct 269 AFAQVEQFTGLPAPREAMTCAAADAD 294
>gi|41407178|ref|NP_960014.1| shikimate 5-dehydrogenase [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395529|gb|AAS03397.1| AroE [Mycobacterium avium subsp. paratuberculosis K-10]
Length=276
Score = 429 bits (1103), Expect = 2e-118, Method: Compositional matrix adjust.
Identities = 221/268 (83%), Positives = 234/268 (88%), Gaps = 0/268 (0%)
Query 2 SEGPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVG 61
S GP++A VLG PI HS+SPQLHLAAYRALGLHDWTYERIEC A +LP VVGGFGPEWVG
Sbjct 9 SAGPRRAAVLGKPIGHSKSPQLHLAAYRALGLHDWTYERIECDADQLPGVVGGFGPEWVG 68
Query 62 VSVTMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHAL 121
VSVTMPGKFAALRFADERT +A VGSANTLVRT GWRADNTDIDGVAGALGAA+G AL
Sbjct 69 VSVTMPGKFAALRFADERTEQARRVGSANTLVRTATGWRADNTDIDGVAGALGAASGWAL 128
Query 122 VLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLADA 181
V GSGGTAPAAV GLA+LGV ITVVARN DKAARLV LG +GV TRFCA D GLAD
Sbjct 129 VCGSGGTAPAAVAGLAQLGVAGITVVARNPDKAARLVRLGDELGVPTRFCALDGAGLADE 188
Query 182 VAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLL 241
VAAAEVLVST+PAEVA YAGTLA + VLLDA+YDPWPTPLAAAV +AGGRVISG+QMLL
Sbjct 189 VAAAEVLVSTLPAEVAERYAGTLARVGVLLDAVYDPWPTPLAAAVSAAGGRVISGMQMLL 248
Query 242 HQAFAQVEQFTGLPAPREAMTCALAALD 269
HQAFAQVEQFTGLPAPREAMTCA A D
Sbjct 249 HQAFAQVEQFTGLPAPREAMTCAAADAD 276
>gi|183982186|ref|YP_001850477.1| shikimate 5-dehydrogenase AroE [Mycobacterium marinum M]
gi|183175512|gb|ACC40622.1| shikimate 5-dehydrogenase AroE [Mycobacterium marinum M]
Length=277
Score = 426 bits (1094), Expect = 2e-117, Method: Compositional matrix adjust.
Identities = 218/264 (83%), Positives = 236/264 (90%), Gaps = 0/264 (0%)
Query 6 KKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVT 65
+KA VLGSPIAHSRSPQLHLAAYRALGL DWTY+RIEC AA+LP VVGGFGPEWVGVSVT
Sbjct 14 RKAAVLGSPIAHSRSPQLHLAAYRALGLTDWTYQRIECDAAQLPAVVGGFGPEWVGVSVT 73
Query 66 MPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHALVLGS 125
MPGKFAAL+FADERTARA+LVGSANTLVRTP GWRADNTDIDGVAGALG A+G A+V GS
Sbjct 74 MPGKFAALQFADERTARAELVGSANTLVRTPRGWRADNTDIDGVAGALGQASGPAIVCGS 133
Query 126 GGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLADAVAAA 185
GGTAPAAVVGLAELGVT+IT+ ARN+DKAARLVDLG R+GVA+RFC D L + A+A
Sbjct 134 GGTAPAAVVGLAELGVTEITIAARNADKAARLVDLGARLGVASRFCGLDDPELGERAASA 193
Query 186 EVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQAF 245
LVSTIPAEVA+ YA T A +PVLLDAIY+PWPTPLAAAV +AGGRVISGL MLLHQAF
Sbjct 194 AALVSTIPAEVASRYAATFATVPVLLDAIYNPWPTPLAAAVAAAGGRVISGLHMLLHQAF 253
Query 246 AQVEQFTGLPAPREAMTCALAALD 269
AQVEQFTGLPAPR AMTCAL ALD
Sbjct 254 AQVEQFTGLPAPRAAMTCALEALD 277
>gi|118166288|gb|ABK67185.1| shikimate-5-dehydrogenase [Mycobacterium avium 104]
Length=260
Score = 422 bits (1085), Expect = 2e-116, Method: Compositional matrix adjust.
Identities = 218/260 (84%), Positives = 229/260 (89%), Gaps = 0/260 (0%)
Query 10 VLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVTMPGK 69
+LG PIAHS+SPQLHLAAYRALGLHDWTYERIEC A +LP VVGGFGPEWVGVSVTMPGK
Sbjct 1 MLGKPIAHSKSPQLHLAAYRALGLHDWTYERIECDADQLPGVVGGFGPEWVGVSVTMPGK 60
Query 70 FAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHALVLGSGGTA 129
FAALRFADERT RA VGSANTLVRT GWRADNTDIDGVAGALGAA+G ALV GSGGTA
Sbjct 61 FAALRFADERTERARRVGSANTLVRTATGWRADNTDIDGVAGALGAASGWALVCGSGGTA 120
Query 130 PAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLADAVAAAEVLV 189
PAAV GLA+LGV ITVVARN DKAARLV LG +GV TRFCA D GLAD VAAAEVLV
Sbjct 121 PAAVAGLAQLGVAGITVVARNPDKAARLVRLGDELGVPTRFCALDGAGLADEVAAAEVLV 180
Query 190 STIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQAFAQVE 249
ST+PAEVA YAGTLA + VLLDA+YDPWPTPLAAAV +AGGRVISG+QMLLHQAFAQVE
Sbjct 181 STLPAEVAERYAGTLARVGVLLDAVYDPWPTPLAAAVSAAGGRVISGMQMLLHQAFAQVE 240
Query 250 QFTGLPAPREAMTCALAALD 269
QFTGLPAPREAMTCA A D
Sbjct 241 QFTGLPAPREAMTCAAADAD 260
>gi|254775874|ref|ZP_05217390.1| shikimate 5-dehydrogenase [Mycobacterium avium subsp. avium ATCC
25291]
Length=260
Score = 422 bits (1084), Expect = 3e-116, Method: Compositional matrix adjust.
Identities = 217/260 (84%), Positives = 229/260 (89%), Gaps = 0/260 (0%)
Query 10 VLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVTMPGK 69
+LG PIAHS+SPQLHLAAYRALGLHDWTYERIEC A +LP VVGGFGPEWVGVSVTMPGK
Sbjct 1 MLGKPIAHSKSPQLHLAAYRALGLHDWTYERIECDADQLPGVVGGFGPEWVGVSVTMPGK 60
Query 70 FAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHALVLGSGGTA 129
FAALRFADERT RA VGSANTLVRT GWRADNTDIDGVAGALGAA+G ALV GSGGTA
Sbjct 61 FAALRFADERTERARRVGSANTLVRTATGWRADNTDIDGVAGALGAASGWALVCGSGGTA 120
Query 130 PAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLADAVAAAEVLV 189
PAAV GLA+LGV ITVV+RN DKAARLV LG +GV TRFCA D GLAD VAAAEVLV
Sbjct 121 PAAVAGLAQLGVAGITVVSRNPDKAARLVRLGDELGVPTRFCALDGAGLADEVAAAEVLV 180
Query 190 STIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQAFAQVE 249
ST+PAEVA YAGTLA + VLLDA+YDPWPTPLAAAV +AGGRVISG+QMLLHQAFAQVE
Sbjct 181 STLPAEVAERYAGTLARVGVLLDAVYDPWPTPLAAAVSAAGGRVISGMQMLLHQAFAQVE 240
Query 250 QFTGLPAPREAMTCALAALD 269
QFTGLPAPREAMTCA A D
Sbjct 241 QFTGLPAPREAMTCAAADAD 260
>gi|118617377|ref|YP_905709.1| shikimate 5-dehydrogenase [Mycobacterium ulcerans Agy99]
gi|118569487|gb|ABL04238.1| shikimate 5-dehydrogenase AroE [Mycobacterium ulcerans Agy99]
Length=277
Score = 421 bits (1082), Expect = 6e-116, Method: Compositional matrix adjust.
Identities = 216/264 (82%), Positives = 235/264 (90%), Gaps = 0/264 (0%)
Query 6 KKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVT 65
+KA VLGSPIAHSRSPQLHLAAYRALGL DWTY+RIEC AA+LP VVGGFGPEWVGVSVT
Sbjct 14 RKAAVLGSPIAHSRSPQLHLAAYRALGLTDWTYQRIECDAAQLPAVVGGFGPEWVGVSVT 73
Query 66 MPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHALVLGS 125
MPGKFAAL+FADERTARA+LVGSANTLVRTP GWRADNTDIDGVAGALG A+G A+V GS
Sbjct 74 MPGKFAALQFADERTARAELVGSANTLVRTPRGWRADNTDIDGVAGALGQASGPAIVCGS 133
Query 126 GGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLADAVAAA 185
GGTAPAAVVGLAELGVT+IT+ ARN+DKAARLVDLG R+GVA+RFC D L + A+A
Sbjct 134 GGTAPAAVVGLAELGVTEITIAARNADKAARLVDLGARLGVASRFCGLDDPELGERAASA 193
Query 186 EVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQAF 245
LVSTIPAEVA+ YA T A +PV+LDAIY+ WPTPLAAAV +AGGRVISGL MLLHQAF
Sbjct 194 AALVSTIPAEVASRYAATFATVPVVLDAIYNSWPTPLAAAVAAAGGRVISGLHMLLHQAF 253
Query 246 AQVEQFTGLPAPREAMTCALAALD 269
AQVEQFTGLPAPR AMTCAL ALD
Sbjct 254 AQVEQFTGLPAPRAAMTCALEALD 277
>gi|336461492|gb|EGO40360.1| shikimate-5-dehydrogenase, fungal AROM-type [Mycobacterium avium
subsp. paratuberculosis S397]
Length=260
Score = 419 bits (1078), Expect = 2e-115, Method: Compositional matrix adjust.
Identities = 216/260 (84%), Positives = 228/260 (88%), Gaps = 0/260 (0%)
Query 10 VLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVTMPGK 69
+LG PI HS+SPQLHLAAYRALGLHDWTYERIEC A +LP VVGGFGPEWVGVSVTMPGK
Sbjct 1 MLGKPIGHSKSPQLHLAAYRALGLHDWTYERIECDADQLPGVVGGFGPEWVGVSVTMPGK 60
Query 70 FAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHALVLGSGGTA 129
FAALRFADERT +A VGSANTLVRT GWRADNTDIDGVAGALGAA+G ALV GSGGTA
Sbjct 61 FAALRFADERTEQARRVGSANTLVRTATGWRADNTDIDGVAGALGAASGWALVCGSGGTA 120
Query 130 PAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLADAVAAAEVLV 189
PAAV GLA+LGV ITVVARN DKAARLV LG +GV TRFCA D GLAD VAAAEVLV
Sbjct 121 PAAVAGLAQLGVAGITVVARNPDKAARLVRLGDELGVPTRFCALDGAGLADEVAAAEVLV 180
Query 190 STIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQAFAQVE 249
ST+PAEVA YAGTLA + VLLDA+YDPWPTPLAAAV +AGGRVISG+QMLLHQAFAQVE
Sbjct 181 STLPAEVAERYAGTLARVGVLLDAVYDPWPTPLAAAVSAAGGRVISGMQMLLHQAFAQVE 240
Query 250 QFTGLPAPREAMTCALAALD 269
QFTGLPAPREAMTCA A D
Sbjct 241 QFTGLPAPREAMTCAAADAD 260
>gi|254821809|ref|ZP_05226810.1| shikimate 5-dehydrogenase [Mycobacterium intracellulare ATCC
13950]
Length=295
Score = 413 bits (1062), Expect = 1e-113, Method: Compositional matrix adjust.
Identities = 217/269 (81%), Positives = 233/269 (87%), Gaps = 1/269 (0%)
Query 2 SEGPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVG 61
S P+KA VLG PIAHS+SPQLHLAAYRALGL WTY+RIEC A +LP VVGG GPEWVG
Sbjct 27 SGAPRKAAVLGKPIAHSKSPQLHLAAYRALGLTGWTYDRIECDADQLPGVVGGLGPEWVG 86
Query 62 VSVTMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGA-AAGHA 120
VSVTMPGKFAAL FADERT RA+ VGSANTLVRTP GWRADNTDIDGVAGALG+ A+G A
Sbjct 87 VSVTMPGKFAALAFADERTERAERVGSANTLVRTPAGWRADNTDIDGVAGALGSTASGWA 146
Query 121 LVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLAD 180
LV GSGGTAPAAV GLA+LGV ITVVARN KAARLV+LG +GVATRFC D GGLAD
Sbjct 147 LVCGSGGTAPAAVAGLAQLGVGGITVVARNPGKAARLVELGHAMGVATRFCDLDGGGLAD 206
Query 181 AVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQML 240
VA+A+VLVSTIPA+VAA YAGT A I VLLDA+YDPWPTPLAAAV +AGGRVISG+QML
Sbjct 207 EVASADVLVSTIPADVAARYAGTFAGIGVLLDAVYDPWPTPLAAAVSAAGGRVISGVQML 266
Query 241 LHQAFAQVEQFTGLPAPREAMTCALAALD 269
LHQAFAQVEQFTGLPAPREAM CAL A D
Sbjct 267 LHQAFAQVEQFTGLPAPREAMACALEASD 295
>gi|296170780|ref|ZP_06852352.1| shikimate dehydrogenase [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295894595|gb|EFG74332.1| shikimate dehydrogenase [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=260
Score = 398 bits (1023), Expect = 4e-109, Method: Compositional matrix adjust.
Identities = 215/259 (84%), Positives = 223/259 (87%), Gaps = 3/259 (1%)
Query 10 VLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVTMPGK 69
+LG PIAHS+SPQLHLAAYRALGLHDWTYERIEC A LP VVGGFGPEWVGVSVTMPGK
Sbjct 1 MLGKPIAHSKSPQLHLAAYRALGLHDWTYERIECDAERLPAVVGGFGPEWVGVSVTMPGK 60
Query 70 FAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGAL---GAAAGHALVLGSG 126
FAALRFADERT RA VGSANTLVRTP GWRADNTDIDGV+GAL G AAG ALV GSG
Sbjct 61 FAALRFADERTERAGRVGSANTLVRTPAGWRADNTDIDGVSGALASTGVAAGPALVCGSG 120
Query 127 GTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLADAVAAAE 186
GTAPAAV+GLAELGVT I VVARN DKAARLVDLG GV+TRF D LA AVA AE
Sbjct 121 GTAPAAVLGLAELGVTAIAVVARNPDKAARLVDLGAGAGVSTRFVHLDGDELAGAVAEAE 180
Query 187 VLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQAFA 246
VLVSTIPA+VAA YA TLAAIPVLLDA+YDPWPTPLAAAV +AGGRVISGLQMLLHQAF
Sbjct 181 VLVSTIPADVAARYADTLAAIPVLLDAVYDPWPTPLAAAVAAAGGRVISGLQMLLHQAFT 240
Query 247 QVEQFTGLPAPREAMTCAL 265
QVE FTGLPAPREAM AL
Sbjct 241 QVELFTGLPAPREAMAAAL 259
>gi|108799316|ref|YP_639513.1| shikimate 5-dehydrogenase [Mycobacterium sp. MCS]
gi|119868432|ref|YP_938384.1| shikimate 5-dehydrogenase [Mycobacterium sp. KMS]
gi|108769735|gb|ABG08457.1| shikimate dehydrogenase [Mycobacterium sp. MCS]
gi|119694521|gb|ABL91594.1| shikimate dehydrogenase [Mycobacterium sp. KMS]
Length=276
Score = 389 bits (999), Expect = 2e-106, Method: Compositional matrix adjust.
Identities = 200/260 (77%), Positives = 218/260 (84%), Gaps = 0/260 (0%)
Query 6 KKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVT 65
+KA VLGSPIAHSRSPQLHLAAYRALGL DWTYERIEC A +LP +VGGFGPEWVGVSVT
Sbjct 14 RKAAVLGSPIAHSRSPQLHLAAYRALGLTDWTYERIECTAEQLPGLVGGFGPEWVGVSVT 73
Query 66 MPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHALVLGS 125
MPGKFAALRFADERT RA+LVGSANTLVRTP+GWRADNTD+DGVAGALG G +V+GS
Sbjct 74 MPGKFAALRFADERTERAELVGSANTLVRTPNGWRADNTDVDGVAGALGNVDGPGIVVGS 133
Query 126 GGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLADAVAAA 185
GGTAPAAVV LA LG T +T+ ARN+DKAA LVDL R+GV R+C D L AAA
Sbjct 134 GGTAPAAVVALAGLGATRLTIAARNADKAASLVDLAHRLGVTARWCDLDDPDLTALAAAA 193
Query 186 EVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQAF 245
+VST+PA+VA YA T A PVLLDAIYDPWPTPLAAAV +AGGRVI GLQMLLHQAF
Sbjct 194 GAVVSTVPADVAQRYAATFAGTPVLLDAIYDPWPTPLAAAVQAAGGRVIGGLQMLLHQAF 253
Query 246 AQVEQFTGLPAPREAMTCAL 265
AQVEQFTGLPAP+EAM AL
Sbjct 254 AQVEQFTGLPAPKEAMRAAL 273
>gi|126434974|ref|YP_001070665.1| shikimate 5-dehydrogenase [Mycobacterium sp. JLS]
gi|126234774|gb|ABN98174.1| shikimate dehydrogenase [Mycobacterium sp. JLS]
Length=272
Score = 386 bits (991), Expect = 2e-105, Method: Compositional matrix adjust.
Identities = 199/260 (77%), Positives = 217/260 (84%), Gaps = 0/260 (0%)
Query 6 KKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVT 65
+KA VLGSPIAHSRSPQLHLAAYRALGL DWTYERIEC A +LP +VG FGPEWVGVSVT
Sbjct 10 RKAAVLGSPIAHSRSPQLHLAAYRALGLTDWTYERIECTAEQLPGLVGRFGPEWVGVSVT 69
Query 66 MPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHALVLGS 125
MPGKFAALRFADERT RA+LVGSANTLVRTP+GWRADNTD+DGVAGALG G +V+GS
Sbjct 70 MPGKFAALRFADERTERAELVGSANTLVRTPNGWRADNTDVDGVAGALGNVDGPGIVVGS 129
Query 126 GGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLADAVAAA 185
GGTAPAAVV LA LG T +T+ ARN+DKAA LVDL R+GV R+C D L AAA
Sbjct 130 GGTAPAAVVALAGLGATRLTIAARNADKAASLVDLAHRLGVTARWCDLDDPDLTALAAAA 189
Query 186 EVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQAF 245
+VST+PA+VA YA T A PVLLDAIYDPWPTPLAAAV +AGGRVI GLQMLLHQAF
Sbjct 190 GAVVSTVPADVAQRYAATFAGTPVLLDAIYDPWPTPLAAAVQAAGGRVIGGLQMLLHQAF 249
Query 246 AQVEQFTGLPAPREAMTCAL 265
AQVEQFTGLPAP+EAM AL
Sbjct 250 AQVEQFTGLPAPKEAMRAAL 269
>gi|342858628|ref|ZP_08715283.1| shikimate 5-dehydrogenase [Mycobacterium colombiense CECT 3035]
gi|342134332|gb|EGT87512.1| shikimate 5-dehydrogenase [Mycobacterium colombiense CECT 3035]
Length=263
Score = 382 bits (982), Expect = 2e-104, Method: Compositional matrix adjust.
Identities = 210/261 (81%), Positives = 223/261 (86%), Gaps = 3/261 (1%)
Query 10 VLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVTMPGK 69
+LG PIAHS+SPQLHLAAYRALGL DWTYERIEC A +LP VVGG GPEWVGVSVTMPGK
Sbjct 1 MLGKPIAHSKSPQLHLAAYRALGLADWTYERIECDAEQLPGVVGGMGPEWVGVSVTMPGK 60
Query 70 FAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAA---AGHALVLGSG 126
FAALRFADERT RA VGSANTLVRTP GWRADNTDIDGVAGAL + +G ALV GSG
Sbjct 61 FAALRFADERTDRAQRVGSANTLVRTPAGWRADNTDIDGVAGALASTKRTSGWALVCGSG 120
Query 127 GTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLADAVAAAE 186
GTAPAAV GLA+LGV ITVVARN DKAARL+ LG +GV TRFC D GLAD VA AE
Sbjct 121 GTAPAAVAGLAQLGVAGITVVARNPDKAARLLGLGDELGVPTRFCDLDGHGLADEVAGAE 180
Query 187 VLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQAFA 246
VLVSTIPA++A YAGT A I VLLDA+YDPWPTPLAAAVG+AGGRV+SGLQMLLHQAFA
Sbjct 181 VLVSTIPADIAERYAGTFARIGVLLDAVYDPWPTPLAAAVGAAGGRVVSGLQMLLHQAFA 240
Query 247 QVEQFTGLPAPREAMTCALAA 267
QVEQFTG PAPREAMTCAL A
Sbjct 241 QVEQFTGRPAPREAMTCALTA 261
>gi|118473062|ref|YP_887345.1| shikimate 5-dehydrogenase [Mycobacterium smegmatis str. MC2 155]
gi|118174349|gb|ABK75245.1| shikimate-5-dehydrogenase [Mycobacterium smegmatis str. MC2 155]
Length=276
Score = 358 bits (919), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 194/262 (75%), Positives = 214/262 (82%), Gaps = 1/262 (0%)
Query 5 PKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSV 64
P+KA VLGSPIAHSRSPQLHLAAYRALGL DWTYERIEC A +LP +V GPEWVG SV
Sbjct 12 PRKAAVLGSPIAHSRSPQLHLAAYRALGLTDWTYERIECTAEQLPGLVEAAGPEWVGFSV 71
Query 65 TMPGKFAALRFADERTARADLVGSANTLVRTPHG-WRADNTDIDGVAGALGAAAGHALVL 123
TMPGKFAAL+FAD+RT RA+LVGSANTLVRT G WRADNTD+DGVAGALG A ALV+
Sbjct 72 TMPGKFAALQFADQRTDRAELVGSANTLVRTEAGGWRADNTDVDGVAGALGTAGEAALVI 131
Query 124 GSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLADAVA 183
GSGGTAPAAVVGLAE+GV IT+VARN+DKAA LVDL R G +C L DAVA
Sbjct 132 GSGGTAPAAVVGLAEMGVQHITIVARNADKAAALVDLAGRCGAQGDWCDIAGPALTDAVA 191
Query 184 AAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQ 243
A VSTIPA+ AAGYA TLAA+P LLDAIY+PWPTPLA AV +AGG VISGLQMLL+Q
Sbjct 192 QASAAVSTIPADAAAGYAPTLAAVPRLLDAIYNPWPTPLATAVQAAGGEVISGLQMLLNQ 251
Query 244 AFAQVEQFTGLPAPREAMTCAL 265
A++QVE FTG PAP+EAM AL
Sbjct 252 AYSQVELFTGRPAPKEAMRAAL 273
>gi|333990978|ref|YP_004523592.1| shikimate 5-dehydrogenase AroE [Mycobacterium sp. JDM601]
gi|333486946|gb|AEF36338.1| shikimate 5-dehydrogenase AroE [Mycobacterium sp. JDM601]
Length=263
Score = 342 bits (878), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 192/260 (74%), Positives = 211/260 (82%), Gaps = 3/260 (1%)
Query 10 VLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVTMPGK 69
+LGSPIAHSRSPQLHLAAYRALGL WTY+RIEC A LP +V G GPEWVGVSVTMPGK
Sbjct 1 MLGSPIAHSRSPQLHLAAYRALGLRGWTYDRIECDAERLPALVSGLGPEWVGVSVTMPGK 60
Query 70 FAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAG---HALVLGSG 126
FAAL FADERT RA+ +GSANTLVR P GW ADNTD+DGV+GALG+ A+VLGSG
Sbjct 61 FAALAFADERTPRAERIGSANTLVRIPTGWLADNTDVDGVSGALGSVGQVYREAIVLGSG 120
Query 127 GTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLADAVAAAE 186
GTAPAAVV L +LGV+ ITV ARN D AARLV L T+VGV R+CA D GLA+A A+A
Sbjct 121 GTAPAAVVALTDLGVSGITVAARNPDNAARLVALATQVGVPARYCALDEAGLAEAAASAS 180
Query 187 VLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQAFA 246
V VST+PAEVAA YA LA +PVLLDAIYDPWPT LAAAV +AGG VISGLQMLLHQAF
Sbjct 181 VTVSTLPAEVAARYAPVLAGVPVLLDAIYDPWPTRLAAAVTAAGGTVISGLQMLLHQAFT 240
Query 247 QVEQFTGLPAPREAMTCALA 266
QVE FTG PAPR AMTC +A
Sbjct 241 QVELFTGRPAPRAAMTCVIA 260
>gi|315444674|ref|YP_004077553.1| shikimate dehydrogenase [Mycobacterium sp. Spyr1]
gi|315262977|gb|ADT99718.1| shikimate dehydrogenase [Mycobacterium sp. Spyr1]
Length=275
Score = 327 bits (839), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 182/263 (70%), Positives = 206/263 (79%), Gaps = 2/263 (0%)
Query 5 PKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSV 64
P++A VLGSPIAHSRSPQLHLAAY ALGL W Y+RIECG ELP V G G EWVG+SV
Sbjct 10 PRRAAVLGSPIAHSRSPQLHLAAYAALGLSSWRYDRIECGEDELPGFVAGLGDEWVGLSV 69
Query 65 TMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAA--AGHALV 122
TMPGKFAALR ADE T RA LVGSANTLV T GWRADNTDIDGVAGAL A +G A+V
Sbjct 70 TMPGKFAALRCADEATERARLVGSANTLVHTATGWRADNTDIDGVAGALADAGVSGSAVV 129
Query 123 LGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLADAV 182
+GSGGTAPA V GL +LG +TVVARN++KA LV LG R G T + + AV
Sbjct 130 VGSGGTAPAVVAGLVQLGARHVTVVARNAEKAQGLVALGRRCGATTEWVDLTGDDVTGAV 189
Query 183 AAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLH 242
AAA+V+V+T+PA+ A YA LA PVLLDAIYDPWPTPLAAAV +AGGRVISGL+MLL+
Sbjct 190 AAADVVVNTVPADAVAPYAPRLAGTPVLLDAIYDPWPTPLAAAVTAAGGRVISGLEMLLN 249
Query 243 QAFAQVEQFTGLPAPREAMTCAL 265
QAFAQVEQFTG+PAP++AM AL
Sbjct 250 QAFAQVEQFTGMPAPQKAMRGAL 272
>gi|145224342|ref|YP_001135020.1| shikimate 5-dehydrogenase [Mycobacterium gilvum PYR-GCK]
gi|145216828|gb|ABP46232.1| shikimate dehydrogenase [Mycobacterium gilvum PYR-GCK]
Length=275
Score = 327 bits (839), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 182/263 (70%), Positives = 206/263 (79%), Gaps = 2/263 (0%)
Query 5 PKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSV 64
P++A VLGSPIAHSRSPQLHLAAY ALGL W Y+RIECG ELP V G G EWVG+SV
Sbjct 10 PRRAAVLGSPIAHSRSPQLHLAAYAALGLSSWRYDRIECGEDELPGFVAGLGDEWVGLSV 69
Query 65 TMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAA--AGHALV 122
TMPGKFAALR ADE T RA LVGSANTLV T GWRADNTDIDGVAGAL A +G A+V
Sbjct 70 TMPGKFAALRCADEATERARLVGSANTLVHTATGWRADNTDIDGVAGALADAGVSGSAVV 129
Query 123 LGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLADAV 182
+GSGGTAPA V GL +LG +TVVARN++KA LV LG R G T + + AV
Sbjct 130 VGSGGTAPAVVAGLVQLGAHHVTVVARNAEKAQGLVALGRRCGATTEWVDLTGDDVTGAV 189
Query 183 AAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLH 242
AAA+V+V+T+PA+ A YA LA PVLLDAIYDPWPTPLAAAV +AGGRVISGL+MLL+
Sbjct 190 AAADVVVNTVPADAVAPYAPRLAGTPVLLDAIYDPWPTPLAAAVTAAGGRVISGLEMLLN 249
Query 243 QAFAQVEQFTGLPAPREAMTCAL 265
QAFAQVEQFTG+PAP++AM AL
Sbjct 250 QAFAQVEQFTGMPAPQKAMRGAL 272
>gi|120403628|ref|YP_953457.1| shikimate 5-dehydrogenase [Mycobacterium vanbaalenii PYR-1]
gi|119956446|gb|ABM13451.1| shikimate-5-dehydrogenase [Mycobacterium vanbaalenii PYR-1]
Length=271
Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 185/267 (70%), Positives = 209/267 (79%), Gaps = 2/267 (0%)
Query 1 MSEGPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWV 60
MS GP++A VLGSPIAHSRSPQLHLAAYRALGL DWTYERIEC +LP VV GFGPEWV
Sbjct 2 MSAGPRRAAVLGSPIAHSRSPQLHLAAYRALGLTDWTYERIECTGEQLPGVVAGFGPEWV 61
Query 61 GVSVTMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALG--AAAG 118
GVSVTMPGKFAALR ADE T RA +VGSANTLVR+ GWRADNTDIDGV GAL
Sbjct 62 GVSVTMPGKFAALRVADEATDRARMVGSANTLVRSSAGWRADNTDIDGVVGALSGVQVTD 121
Query 119 HALVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGL 178
A+V+GSGGTAPA VVGL LG +TV AR++DKA+ LV+L R G + G L
Sbjct 122 RAMVIGSGGTAPAVVVGLVTLGARFVTVAARHADKASALVELAVRCGARAGWVDLQHGRL 181
Query 179 ADAVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQ 238
A+ VA EV+V+T+PA+ A +A LA PVLLDAIYDPWPTPLAAAV +AGG+VISGL+
Sbjct 182 AEEVAGVEVVVNTVPADAVAPHAAALAGTPVLLDAIYDPWPTPLAAAVQAAGGQVISGLE 241
Query 239 MLLHQAFAQVEQFTGLPAPREAMTCAL 265
MLL+QAF QVEQFTGLPAP+EAM AL
Sbjct 242 MLLNQAFTQVEQFTGLPAPKEAMRAAL 268
>gi|226306475|ref|YP_002766435.1| shikimate dehydrogenase [Rhodococcus erythropolis PR4]
gi|226185592|dbj|BAH33696.1| shikimate dehydrogenase [Rhodococcus erythropolis PR4]
Length=279
Score = 302 bits (774), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 160/268 (60%), Positives = 195/268 (73%), Gaps = 6/268 (2%)
Query 5 PKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSV 64
P+KA VLGSPIAHS+SP LHLAAY ALGL DWTYERIEC +LP +V GPEWVG+SV
Sbjct 12 PRKAAVLGSPIAHSKSPLLHLAAYEALGLSDWTYERIECTGEQLPALVDSLGPEWVGLSV 71
Query 65 TMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGA------AAG 118
TMPGK AAL +A ERT RA +GSANTLVR GWRAD TD+DGV+GAL A +
Sbjct 72 TMPGKIAALDYATERTPRAVTIGSANTLVRIDGGWRADCTDVDGVSGALIAGGVGDLSGT 131
Query 119 HALVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGL 178
A+V+G+GGTA A+V LA++GV +TVVAR+ +A+ ++ G+ VG+ +FD L
Sbjct 132 SAVVVGAGGTARPALVALADMGVRTVTVVARDPGRASGAIECGSAVGLGIDLVSFDDARL 191
Query 179 ADAVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQ 238
A + VLVST+PAE AA +A L +LDAIY+PWPTPLA+ V +AGG VI GL+
Sbjct 192 GGICAESSVLVSTVPAEAAAPFAQQLGRARFVLDAIYNPWPTPLASVVEAAGGTVIGGLE 251
Query 239 MLLHQAFAQVEQFTGLPAPREAMTCALA 266
MLL+QAF QVEQFTG PAPREAM A+A
Sbjct 252 MLLNQAFGQVEQFTGKPAPREAMAAAIA 279
>gi|111024088|ref|YP_707060.1| shikimate 5-dehydrogenase [Rhodococcus jostii RHA1]
gi|110823618|gb|ABG98902.1| shikimate 5-dehydrogenase [Rhodococcus jostii RHA1]
Length=275
Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 167/266 (63%), Positives = 193/266 (73%), Gaps = 6/266 (2%)
Query 6 KKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVT 65
+KA VLGSPIAHSRSPQLHLAAYRALGL WTY+RIEC LP +V G GPEWVG+SVT
Sbjct 9 RKAAVLGSPIAHSRSPQLHLAAYRALGLTGWTYDRIECDGERLPGLVSGLGPEWVGLSVT 68
Query 66 MPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGAL-----GAAAG-H 119
MPGK AAL FA ERT RA ++GSANTLVR GWRAD TD+DGV+GAL G AG
Sbjct 69 MPGKIAALEFASERTERAVVIGSANTLVRIEGGWRADCTDVDGVSGALIAGGVGTIAGTE 128
Query 120 ALVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLA 179
A+V+G+GGTA A+V LA++GV +TVVAR++ +AA + VG+ R FDS L
Sbjct 129 AVVVGAGGTARPALVALADMGVKSVTVVARDAGRAAGALGCAESVGLDVRLLGFDSPELG 188
Query 180 DAVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQM 239
A+A LVST+P+ YA L P +LDAIYDPWPTPLAAAV +AGG V+ GL M
Sbjct 189 ARCASAAALVSTVPSAAITEYADILGRAPFVLDAIYDPWPTPLAAAVEAAGGTVVGGLSM 248
Query 240 LLHQAFAQVEQFTGLPAPREAMTCAL 265
LLHQAF QVEQFTG PAPREAM AL
Sbjct 249 LLHQAFGQVEQFTGRPAPREAMAAAL 274
>gi|333919512|ref|YP_004493093.1| Shikimate-5-dehydrogenase [Amycolicicoccus subflavus DQS3-9A1]
gi|333481733|gb|AEF40293.1| Shikimate-5-dehydrogenase [Amycolicicoccus subflavus DQS3-9A1]
Length=276
Score = 294 bits (752), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 159/266 (60%), Positives = 186/266 (70%), Gaps = 8/266 (3%)
Query 6 KKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVT 65
++AGVLGSPIAHSRSPQLHLAAYRALGL DWTYERIEC A EL +V G G EWVGVSVT
Sbjct 8 RRAGVLGSPIAHSRSPQLHLAAYRALGLRDWTYERIECRAGELAGIVSGLGAEWVGVSVT 67
Query 66 MPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALG------AAAGH 119
MPGK AL FA ERT RA +VGSANTLVRT GWRAD TD+DGV GAL ++
Sbjct 68 MPGKLEALEFATERTERAVVVGSANTLVRTASGWRADCTDVDGVTGALAELGVTDVSSKP 127
Query 120 ALVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLA 179
A+V+G+GGTA A+V LAELG ++ VVAR+ +A V+ G R G++ + F LA
Sbjct 128 AIVIGAGGTARPALVALAELGASEAVVVARDEQRAEGAVECGLRAGLSVTYAPFSD--LA 185
Query 180 DAVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQM 239
A ++STIPA+ +G+ A P +LD IY PWPTPLAAAV GGRV GL M
Sbjct 186 RLCPDASAVISTIPADAMSGHLEAAATAPHVLDVIYHPWPTPLAAAVRERGGRVTGGLSM 245
Query 240 LLHQAFAQVEQFTGLPAPREAMTCAL 265
LL+QA+ QVEQFTG PAPR M AL
Sbjct 246 LLNQAYGQVEQFTGRPAPRAEMAQAL 271
>gi|226366328|ref|YP_002784111.1| shikimate 5-dehydrogenase [Rhodococcus opacus B4]
gi|226244818|dbj|BAH55166.1| shikimate dehydrogenase [Rhodococcus opacus B4]
Length=275
Score = 288 bits (737), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 166/266 (63%), Positives = 189/266 (72%), Gaps = 6/266 (2%)
Query 6 KKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVT 65
++A VLGSPIAHSRSPQLHLAAYRALGL WTY+RIEC LP +V G GPEWVG+SVT
Sbjct 9 RRAAVLGSPIAHSRSPQLHLAAYRALGLTGWTYDRIECDGERLPGLVSGLGPEWVGLSVT 68
Query 66 MPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGAL------GAAAGH 119
MPGK AAL FA ERT RA +GSANTLVR GWRAD TD+DGV+GAL A
Sbjct 69 MPGKIAALEFASERTDRAVAIGSANTLVRIEGGWRADCTDVDGVSGALTAGGVGAIAGAE 128
Query 120 ALVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLA 179
A+V+G+GGTA A+V LA+LGV +TVVAR++ +AA + VG+ R FDS L
Sbjct 129 AVVVGAGGTARPALVALADLGVKSVTVVARDAGRAAGALGCAESVGLEVRLLGFDSPELG 188
Query 180 DAVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQM 239
AAA LVST+P A A L P +LDAIYDPWPTPLAAAV +AGG V+ GL M
Sbjct 189 ARCAAAAALVSTVPCAAIADCADVLGRAPFVLDAIYDPWPTPLAAAVEAAGGTVVGGLSM 248
Query 240 LLHQAFAQVEQFTGLPAPREAMTCAL 265
LLHQAF QVEQFTG PAPREAM AL
Sbjct 249 LLHQAFGQVEQFTGRPAPREAMAAAL 274
>gi|312139555|ref|YP_004006891.1| shikimate dehydrogenase aroe [Rhodococcus equi 103S]
gi|311888894|emb|CBH48207.1| shikimate dehydrogenase AroE [Rhodococcus equi 103S]
Length=274
Score = 286 bits (731), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 154/254 (61%), Positives = 181/254 (72%), Gaps = 6/254 (2%)
Query 6 KKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVT 65
+KA VLGSPIAHS+SP LHLAAYRALGL DWTYERIEC +LP +V G GPEWVG+SVT
Sbjct 7 RKAAVLGSPIAHSKSPDLHLAAYRALGLTDWTYERIECTGEQLPGLVSGLGPEWVGLSVT 66
Query 66 MPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGA------AAGH 119
MPGK AAL FA ERT RA +GSANTLVR GWRAD TD+DGV GAL +
Sbjct 67 MPGKVAALEFATERTDRAVAIGSANTLVRIDDGWRADCTDVDGVRGALAEGGIGDLSGAP 126
Query 120 ALVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLA 179
A+V+G+GGTA A+V LA+LGV +TVVAR++ +A +D G VG+ R FD L
Sbjct 127 AVVIGAGGTARPALVALADLGVGSVTVVARDAARARETLDCGEAVGLHVRHLTFDDARLG 186
Query 180 DAVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQM 239
D A + LVST+PA AA +A + P +LDAIYDPWPTPLA AV AGG V+ GL M
Sbjct 187 DVCAHSAALVSTVPAVGAAPWAEAIGRAPFVLDAIYDPWPTPLAQAVERAGGTVVGGLAM 246
Query 240 LLHQAFAQVEQFTG 253
LL+QA+ QVEQFTG
Sbjct 247 LLNQAYGQVEQFTG 260
>gi|325672561|ref|ZP_08152257.1| shikimate dehydrogenase [Rhodococcus equi ATCC 33707]
gi|325556438|gb|EGD26104.1| shikimate dehydrogenase [Rhodococcus equi ATCC 33707]
Length=277
Score = 285 bits (729), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 156/254 (62%), Positives = 183/254 (73%), Gaps = 6/254 (2%)
Query 6 KKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVT 65
+KA VLGSPIAHS+SP LHLAAYRALGL DWTYERIEC +LP +V G GPEWVG+SVT
Sbjct 10 RKAAVLGSPIAHSKSPDLHLAAYRALGLTDWTYERIECTGEQLPGLVSGLGPEWVGLSVT 69
Query 66 MPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGAL-----GAAAGH- 119
MPGK AAL FA ERT RA +GSANTLVR GWRAD TD+DGV GAL G +G
Sbjct 70 MPGKVAALEFATERTDRAVAIGSANTLVRIDDGWRADCTDVDGVRGALVEGGIGDLSGAP 129
Query 120 ALVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLA 179
A+V+G+GGTA A+V LA+LGV +TVVAR++ +A +D G VG+ R FD L
Sbjct 130 AVVIGAGGTARPALVALADLGVGSVTVVARDAARARETLDCGEAVGLHVRHLTFDDARLG 189
Query 180 DAVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQM 239
D A + LVST+PA AA +A + P +LDAIYDPWPTPLA AV AGG V+ GL M
Sbjct 190 DVCAHSAALVSTVPAVGAAPWAEAIGRAPFVLDAIYDPWPTPLAQAVERAGGTVVGGLAM 249
Query 240 LLHQAFAQVEQFTG 253
LL+QA+ QVEQFTG
Sbjct 250 LLNQAYGQVEQFTG 263
>gi|169629932|ref|YP_001703581.1| shikimate 5-dehydrogenase [Mycobacterium abscessus ATCC 19977]
gi|169241899|emb|CAM62927.1| Probable shikimate-5-dehydrogenase (AroE) [Mycobacterium abscessus]
Length=271
Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 152/254 (60%), Positives = 183/254 (73%), Gaps = 5/254 (1%)
Query 6 KKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVT 65
++A VLGSPI HSRSP LH+AAYRALGL WTYERIEC A +LP VVGG GPEWVG SVT
Sbjct 6 RRAAVLGSPIGHSRSPDLHVAAYRALGLTGWTYERIECTAEQLPDVVGGAGPEWVGFSVT 65
Query 66 MPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAA----AGH-A 120
MPGKFAALRFA T RA +G+ANTLVR+ GW ADNTD+DGV+GAL A AG A
Sbjct 66 MPGKFAALRFASTSTERARSIGAANTLVRSGDGWHADNTDVDGVSGALAGAGIDPAGQSA 125
Query 121 LVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLAD 180
+++G+GGTA A+V LA +GV +TVVAR++ +A +++L +G+ +F L+
Sbjct 126 VIVGAGGTARPAIVALAAMGVRALTVVARDAGRAQGVLELAEHLGLRASVLSFTDAELSS 185
Query 181 AVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQML 240
AA VLVST+PAE AA YA +LAA P +LD IY PWPT LAAA G V+ GL ML
Sbjct 186 VCQAAGVLVSTVPAEAAAPYARSLAAAPAILDVIYHPWPTTLAAAAQRRGAVVVGGLDML 245
Query 241 LHQAFAQVEQFTGL 254
L+QAF QVE FTGL
Sbjct 246 LNQAFTQVELFTGL 259
>gi|229493503|ref|ZP_04387288.1| shikimate-5-dehydrogenase [Rhodococcus erythropolis SK121]
gi|229319464|gb|EEN85300.1| shikimate-5-dehydrogenase [Rhodococcus erythropolis SK121]
Length=279
Score = 277 bits (708), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 159/268 (60%), Positives = 193/268 (73%), Gaps = 6/268 (2%)
Query 5 PKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSV 64
P+KA VLGSPIAHS+SP LHLAAY ALGL DWTYERIEC +LP +V GPEW+G+SV
Sbjct 12 PRKAAVLGSPIAHSKSPLLHLAAYAALGLSDWTYERIECTGEQLPALVDSLGPEWIGLSV 71
Query 65 TMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGA------AAG 118
TMPGK AAL +A ERT RA +GSANTLVR GWRAD TD+DGV+GAL A +
Sbjct 72 TMPGKIAALEYATERTPRAVTIGSANTLVRIDGGWRADCTDVDGVSGALIAGGVGDLSGT 131
Query 119 HALVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGL 178
A+V+G+GGTA A+V LA++GV +TVVAR+ +A+ ++ G VG+ AFD L
Sbjct 132 SAVVVGAGGTARPALVALADMGVRTVTVVARDPGRASGAIECGGAVGLDIDLVAFDDARL 191
Query 179 ADAVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQ 238
A + VLVST+PAE AA +A L +LDAIY+PWPTPLA+ V +A G VI GL+
Sbjct 192 GGICAESSVLVSTVPAEAAAPFAQQLGKARFVLDAIYNPWPTPLASVVEAADGTVIGGLE 251
Query 239 MLLHQAFAQVEQFTGLPAPREAMTCALA 266
MLL+QAF QVEQFTG PAPREAM A+A
Sbjct 252 MLLNQAFGQVEQFTGKPAPREAMAAAIA 279
>gi|262202253|ref|YP_003273461.1| shikimate-5-dehydrogenase [Gordonia bronchialis DSM 43247]
gi|262085600|gb|ACY21568.1| shikimate-5-dehydrogenase [Gordonia bronchialis DSM 43247]
Length=298
Score = 275 bits (703), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 151/258 (59%), Positives = 186/258 (73%), Gaps = 9/258 (3%)
Query 6 KKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVT 65
++A VLGSP++HSRSP LHLAAYRALGL DWTYERIEC A +LP +V G GPE++G+SVT
Sbjct 24 RRAAVLGSPVSHSRSPDLHLAAYRALGLDDWTYERIECTADQLPSLVDGLGPEFIGLSVT 83
Query 66 MPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGAL--------GAAA 117
MPGK AAL AD T RA LVGSANTLVRT GWRAD TDIDG+ GAL A
Sbjct 84 MPGKLAALGHADLSTERARLVGSANTLVRTADGWRADCTDIDGMLGALADLGVRPQADAG 143
Query 118 GHALVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGG 177
G A+++G+GGTA V LA+ G ++ VVAR++ +A ++ L R+G+ T AF+ G
Sbjct 144 GRAVLIGAGGTALPTVAALAQRGFREVAVVARDAGRARSVIALCERLGIDTTIVAFEPGA 203
Query 178 -LADAVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISG 236
LAD A V+VST+PA AA A ++A ++D IYDPWPTPLAAAV +AGG V+ G
Sbjct 204 DLADRCRDAHVVVSTVPAAGAATLAESVAGAARVVDVIYDPWPTPLAAAVTAAGGSVVGG 263
Query 237 LQMLLHQAFAQVEQFTGL 254
L MLL+QAF+QVEQFTGL
Sbjct 264 LVMLLNQAFSQVEQFTGL 281
>gi|326382146|ref|ZP_08203838.1| shikimate 5-dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
gi|326198876|gb|EGD56058.1| shikimate 5-dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
Length=281
Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 148/256 (58%), Positives = 185/256 (73%), Gaps = 6/256 (2%)
Query 4 GPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVS 63
GP+KA VLGSP+ HS+SP +H AAY ALGL WTY+ I+ GA EL VGG GPEWVG S
Sbjct 12 GPRKAAVLGSPVTHSKSPAVHRAAYAALGLDGWTYDAIDTGADELAARVGGSGPEWVGFS 71
Query 64 VTMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGAL-----GAAAG 118
VTMPGK AAL FADERT RA+L+GSANTLVRT GWRAD TD+DG+ GAL A A
Sbjct 72 VTMPGKLAALAFADERTRRAELIGSANTLVRTADGWRADCTDVDGMTGALAAAGVPATAA 131
Query 119 HALVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGG- 177
A+V+G+GGTA V LAE GV +++VVAR++++AA +++L ++G++ R FD+
Sbjct 132 RAVVIGAGGTALPTVAALAEAGVDEVSVVARSAERAAGVLELAEKLGMSARVIGFDADAV 191
Query 178 LADAVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGL 237
L A A A+V VST+PA A + L+D IYDPWPTPLAAAV +AGG V+ GL
Sbjct 192 LRSACAEADVTVSTVPAPAAESLIPAVIGTGRLVDVIYDPWPTPLAAAVSAAGGTVVGGL 251
Query 238 QMLLHQAFAQVEQFTG 253
MLL+QA++QVEQFTG
Sbjct 252 VMLLNQAYSQVEQFTG 267
>gi|343924305|ref|ZP_08763856.1| shikimate dehydrogenase [Gordonia alkanivorans NBRC 16433]
gi|343765739|dbj|GAA10782.1| shikimate dehydrogenase [Gordonia alkanivorans NBRC 16433]
Length=284
Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 159/271 (59%), Positives = 193/271 (72%), Gaps = 11/271 (4%)
Query 6 KKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVT 65
++A VLGSPIAHS+SP +HLAAYRALGL DWTY+RIEC A LP +V PE+VG SVT
Sbjct 10 RRAAVLGSPIAHSKSPAVHLAAYRALGLDDWTYDRIECTADRLPEIVSDAAPEFVGFSVT 69
Query 66 MPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGA---------- 115
MP K AAL FA ERT RA+LVGSANTLVR GWRAD TDIDG+ GAL
Sbjct 70 MPNKLAALDFATERTERAELVGSANTLVRIDGGWRADCTDIDGMTGALAELGVDADLAAG 129
Query 116 AAGHALVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDS 175
AA A+V+G+GGTA V+ LAE+GV+ I+VVAR++ +AA +++L R+G+A FD+
Sbjct 130 AAPDAVVVGAGGTALPTVMALAEVGVSTISVVARDAGRAASVLELCERLGIAGEVVPFDA 189
Query 176 G-GLADAVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVI 234
G L + AA V+VST+PA A A +A ++D IYDPWPTPLAA V +AGG V+
Sbjct 190 GTSLENRCRAASVVVSTVPAPAAETLAPAIAHARKVVDVIYDPWPTPLAATVEAAGGVVV 249
Query 235 SGLQMLLHQAFAQVEQFTGLPAPREAMTCAL 265
GL MLL+QAF QVE FTGLPAPREAMT L
Sbjct 250 GGLVMLLNQAFRQVELFTGLPAPREAMTKVL 280
>gi|254551603|ref|ZP_05142050.1| shikimate 5-dehydrogenase [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
Length=138
Score = 266 bits (679), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 138/138 (100%), Positives = 138/138 (100%), Gaps = 0/138 (0%)
Query 132 AVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLADAVAAAEVLVST 191
AVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLADAVAAAEVLVST
Sbjct 1 AVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLADAVAAAEVLVST 60
Query 192 IPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQAFAQVEQF 251
IPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQAFAQVEQF
Sbjct 61 IPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQAFAQVEQF 120
Query 252 TGLPAPREAMTCALAALD 269
TGLPAPREAMTCALAALD
Sbjct 121 TGLPAPREAMTCALAALD 138
>gi|254551604|ref|ZP_05142051.1| shikimate 5-dehydrogenase [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
Length=131
Score = 265 bits (676), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 131/131 (100%), Positives = 131/131 (100%), Gaps = 0/131 (0%)
Query 1 MSEGPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWV 60
MSEGPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWV
Sbjct 1 MSEGPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWV 60
Query 61 GVSVTMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHA 120
GVSVTMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHA
Sbjct 61 GVSVTMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHA 120
Query 121 LVLGSGGTAPA 131
LVLGSGGTAPA
Sbjct 121 LVLGSGGTAPA 131
>gi|296394054|ref|YP_003658938.1| shikimate-5-dehydrogenase [Segniliparus rotundus DSM 44985]
gi|296181201|gb|ADG98107.1| shikimate-5-dehydrogenase [Segniliparus rotundus DSM 44985]
Length=276
Score = 258 bits (660), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 142/265 (54%), Positives = 171/265 (65%), Gaps = 5/265 (1%)
Query 7 KAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVTM 66
KA VLGSPI HS SP LH+AAYRALGL DWTYERIEC A +LP +V G P W G+SVT
Sbjct 2 KAAVLGSPIGHSLSPVLHMAAYRALGLEDWTYERIECAADQLPELVSGLSPAWAGLSVTA 61
Query 67 PGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGA-----AAGHAL 121
P K AAL FAD RT A+ VGSANTLVR GW AD TD+DG GALG + A+
Sbjct 62 PNKLAALAFADTRTELAEAVGSANTLVRQGGGWHADCTDVDGAVGALGELDIDPSGKPAV 121
Query 122 VLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLADA 181
V+GSGGT+ V LA G+ + VV+R+ +A + L G+ R+ +S LA
Sbjct 122 VVGSGGTSLPVVAALARRGIREAVVVSRDEKRAYPALRLAKAFGLRPRWMDLNSPYLAKV 181
Query 182 VAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLL 241
A AEV+V+T+PA+ A +A +LA + D IYDPWPT LA G RV+ G MLL
Sbjct 182 AAIAEVVVNTVPADALAPWAPSLAQASAVFDVIYDPWPTTLARLAAQGGSRVVGGDSMLL 241
Query 242 HQAFAQVEQFTGLPAPREAMTCALA 266
HQAF QVE FTG PAP+EAM AL+
Sbjct 242 HQAFRQVEWFTGQPAPQEAMRSALS 266
>gi|54025611|ref|YP_119853.1| shikimate 5-dehydrogenase [Nocardia farcinica IFM 10152]
gi|54017119|dbj|BAD58489.1| putative shikimate 5-dehydrogenase [Nocardia farcinica IFM 10152]
Length=273
Score = 258 bits (660), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 164/267 (62%), Positives = 194/267 (73%), Gaps = 5/267 (1%)
Query 5 PKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSV 64
P++A VLG PI HSRSPQLHLAAYRALGL DWTY+RIEC AA+LP +V G GPEWVG+SV
Sbjct 8 PRRAAVLGKPIGHSRSPQLHLAAYRALGL-DWTYDRIECDAAQLPGLVDGLGPEWVGLSV 66
Query 65 TMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGAL----GAAAGHA 120
TMPGK AAL +AD RT RA LVGSANTLVRT GWRAD TD+DGV GAL G
Sbjct 67 TMPGKEAALGYADVRTERAVLVGSANTLVRTETGWRADCTDVDGVLGALRGGGVTGVGSG 126
Query 121 LVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLAD 180
+VLG+GGTA A++ L ELG +T+VAR+ +A +L ++G+ FD G+
Sbjct 127 VVLGAGGTARPALLALRELGARSVTIVARDEGRARPARELAEKLGLTVTVAGFDPDGVRA 186
Query 181 AVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQML 240
A A A+ +VSTIPAE AA A +A PV+LDAIY+PWPTPLA AV +AG V+SGLQML
Sbjct 187 ACAQAQAVVSTIPAEAAATIAAAVATAPVVLDAIYNPWPTPLATAVEAAGHTVVSGLQML 246
Query 241 LHQAFAQVEQFTGLPAPREAMTCALAA 267
L QA+ QVEQFTG PAPR AM AL +
Sbjct 247 LEQAYGQVEQFTGRPAPRGAMAAALTS 273
>gi|225021336|ref|ZP_03710528.1| hypothetical protein CORMATOL_01355 [Corynebacterium matruchotii
ATCC 33806]
gi|305680728|ref|ZP_07403535.1| shikimate-5-dehydrogenase [Corynebacterium matruchotii ATCC 14266]
gi|224945718|gb|EEG26927.1| hypothetical protein CORMATOL_01355 [Corynebacterium matruchotii
ATCC 33806]
gi|305658933|gb|EFM48433.1| shikimate-5-dehydrogenase [Corynebacterium matruchotii ATCC 14266]
Length=275
Score = 248 bits (633), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 142/269 (53%), Positives = 173/269 (65%), Gaps = 10/269 (3%)
Query 6 KKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVT 65
+A VLG PIAHS SP LH A YRALGL W Y RIEC ELP VV G + G SVT
Sbjct 4 HQAAVLGKPIAHSLSPLLHNAGYRALGLTQWEYTRIECDEHELPQVVAGADASFRGFSVT 63
Query 66 MPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGAL-------GAAAG 118
MPGKFAAL A +RT RA L+GSANTLVR+ GWRADNTD DGV GA+ G
Sbjct 64 MPGKFAALAVATDRTDRARLIGSANTLVRSGDGWRADNTDCDGVTGAIRTLFDAPSPQLG 123
Query 119 HALVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGL 178
A+++G+GGTA A+ LAELGV+ +T++ R SD++ L DL +G+ F +D +
Sbjct 124 TAVIIGAGGTARPALWALAELGVSHVTIINR-SDRSRELADLIAAIGLQVDFVPYDD-TI 181
Query 179 ADAVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQ 238
+ A A A+V++ST+PA A + LA P LLD IYDPWPTPL AA + + G
Sbjct 182 STACATADVIISTVPAAGIAEHVDKLAQAP-LLDVIYDPWPTPLVAAARNRHLPAVGGHV 240
Query 239 MLLHQAFAQVEQFTGLPAPREAMTCALAA 267
ML HQA+ Q EQFTG PAPREAM AL +
Sbjct 241 MLAHQAYGQFEQFTGYPAPREAMWAALTS 269
>gi|213966149|ref|ZP_03394336.1| shikimate-5-dehydrogenase [Corynebacterium amycolatum SK46]
gi|213951247|gb|EEB62642.1| shikimate-5-dehydrogenase [Corynebacterium amycolatum SK46]
Length=271
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/266 (54%), Positives = 169/266 (64%), Gaps = 7/266 (2%)
Query 6 KKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVT 65
+A VLG PI HS SP +H A YRA G++DW Y+RI C A EL VVGG P + G SVT
Sbjct 5 HRAAVLGDPIDHSYSPAIHNAGYRAAGMNDWHYDRIRCNAEELADVVGGADPSFQGFSVT 64
Query 66 MPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGAL------GAAAGH 119
MPGKFAAL FADE + RA L+GSANTLVR GW ADNTD DGV GAL A G
Sbjct 65 MPGKFAALDFADEVSERARLIGSANTLVRRDSGWFADNTDGDGVLGALREIDCTNAPRGR 124
Query 120 ALVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLA 179
A+V+G+GGTA A+ L++LGV +TVVAR S++A + L +G+ + FD LA
Sbjct 125 AVVVGAGGTARPALWALSQLGVNHVTVVAR-SERAYDIEPLAAALGMEFVWVTFDVPNLA 183
Query 180 DAVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQM 239
D A+VLVST+P+ AG LA P +LD IY+PWPTPL A G + + GL M
Sbjct 184 DIAGNADVLVSTVPSAAIESVAGYLARAPKILDVIYNPWPTPLVKAAERGGTQAVGGLSM 243
Query 240 LLHQAFAQVEQFTGLPAPREAMTCAL 265
LLHQA Q EQFTG EAM AL
Sbjct 244 LLHQAVGQFEQFTGRTPDVEAMRAAL 269
>gi|306836210|ref|ZP_07469194.1| shikimate-5-dehydrogenase [Corynebacterium accolens ATCC 49726]
gi|304567931|gb|EFM43512.1| shikimate-5-dehydrogenase [Corynebacterium accolens ATCC 49726]
Length=272
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 135/264 (52%), Positives = 170/264 (65%), Gaps = 8/264 (3%)
Query 7 KAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVTM 66
+A VLGSPIAHS SP LH A Y A+GL DW+Y R E A L + GPE+ G SVTM
Sbjct 3 RAAVLGSPIAHSLSPILHNAGYAAVGLKDWSYTRFEVTADTLAPFLEECGPEYRGFSVTM 62
Query 67 PGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAG-----HAL 121
PGKFAAL A+E++ RA L+GSANTLVRT HGWRADNTD +GV GAL G AL
Sbjct 63 PGKFAALEVAEEQSDRAQLIGSANTLVRTEHGWRADNTDTEGVRGALQELIGLRPVSQAL 122
Query 122 VLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLADA 181
++G+GGT+ A+ LAE G+ +T++ R S++ A L L R+G+ ++ FD L D
Sbjct 123 IIGAGGTSRPALWALAERGIDQVTILNR-SNRQAELQPLAERLGLNLQYATFDD-DLEDL 180
Query 182 VAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLL 241
+A++++ST+P+ Y LA PV LD IY PWPT LAA + G + G ML
Sbjct 181 SRSADLIISTVPSAALEDYRFQLAHAPV-LDVIYHPWPTTLAACAAANGYFTVGGHVMLA 239
Query 242 HQAFAQVEQFTGLPAPREAMTCAL 265
HQAF+Q EQFTGL APRE M AL
Sbjct 240 HQAFSQFEQFTGLTAPREEMVAAL 263
>gi|255325068|ref|ZP_05366174.1| shikimate-5-dehydrogenase [Corynebacterium tuberculostearicum
SK141]
gi|311739529|ref|ZP_07713364.1| shikimate-5-dehydrogenase [Corynebacterium pseudogenitalium ATCC
33035]
gi|255297633|gb|EET76944.1| shikimate-5-dehydrogenase [Corynebacterium tuberculostearicum
SK141]
gi|311305345|gb|EFQ81413.1| shikimate-5-dehydrogenase [Corynebacterium pseudogenitalium ATCC
33035]
Length=275
Score = 241 bits (615), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 137/264 (52%), Positives = 166/264 (63%), Gaps = 8/264 (3%)
Query 7 KAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVTM 66
+A VLGSPI HS SP LH A Y A GL W Y R E A LP +V E+VG SVTM
Sbjct 3 RAAVLGSPIKHSLSPVLHNAGYEAAGLAGWDYTRFETSAEGLPELVAASDSEFVGFSVTM 62
Query 67 PGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAG-----HAL 121
PGKFAALRFAD + RA L+GSANTLVR GW ADNTD +GV GAL G HAL
Sbjct 63 PGKFAALRFADTVSDRAQLIGSANTLVRRADGWYADNTDTEGVRGALAELLGDDPAAHAL 122
Query 122 VLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLADA 181
++G+GGTA A+ L+E GV +TV+ R SD++ L+ L +G+ F +FD G L+
Sbjct 123 LIGAGGTARPALWALSERGVKKVTVLNR-SDRSTELLPLAQNLGLELSFVSFD-GDLSAL 180
Query 182 VAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLL 241
+ +V+VST+PA Y LA PV LD IYDPWPTPL + G + + G ML
Sbjct 181 ARSVDVIVSTVPAAAVKDYVFDLAHAPV-LDVIYDPWPTPLTTCAAANGYKTVGGHVMLA 239
Query 242 HQAFAQVEQFTGLPAPREAMTCAL 265
HQAF+Q EQFTG+ APRE M AL
Sbjct 240 HQAFSQFEQFTGVAAPREDMLKAL 263
>gi|227503539|ref|ZP_03933588.1| shikimate 5-dehydrogenase [Corynebacterium accolens ATCC 49725]
gi|227075575|gb|EEI13538.1| shikimate 5-dehydrogenase [Corynebacterium accolens ATCC 49725]
Length=272
Score = 238 bits (608), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 133/264 (51%), Positives = 169/264 (65%), Gaps = 8/264 (3%)
Query 7 KAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVTM 66
+A VLGSPIAHS SP LH A Y A+GL +W+Y R E A L + G E+ G SVTM
Sbjct 3 RAAVLGSPIAHSLSPILHNAGYAAVGLKEWSYTRFEVTADTLVSFLEECGTEYHGFSVTM 62
Query 67 PGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAG-----HAL 121
PGKFAAL A+E++ RA L+GSANTLVRT HGWRADNTD +GV GAL G AL
Sbjct 63 PGKFAALEVAEEQSDRARLIGSANTLVRTEHGWRADNTDTEGVRGALQELIGLRPVSQAL 122
Query 122 VLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLADA 181
++G+GGT+ A+ LAE G+ +T++ R S++ A L L R+G+ ++ FD L D
Sbjct 123 IIGAGGTSRPALWALAERGIDQVTILNR-SNRQAELQPLAERLGLNLQYATFDD-DLEDL 180
Query 182 VAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLL 241
+A++++ST+P+ Y LA PV LD IY PWPT LAA + G + G ML
Sbjct 181 SRSADLIISTVPSAALEDYRFQLAHAPV-LDVIYHPWPTTLAACAAANGYFTVGGHVMLA 239
Query 242 HQAFAQVEQFTGLPAPREAMTCAL 265
HQAF+Q EQFTGL APRE M AL
Sbjct 240 HQAFSQFEQFTGLTAPREEMVAAL 263
>gi|145295751|ref|YP_001138572.1| shikimate 5-dehydrogenase [Corynebacterium glutamicum R]
gi|140845671|dbj|BAF54670.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344044924|gb|EGV40598.1| shikimate 5-dehydrogenase [Corynebacterium glutamicum S9114]
Length=276
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 134/267 (51%), Positives = 163/267 (62%), Gaps = 14/267 (5%)
Query 6 KKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVT 65
+A VLGSPI HS+SP LH Y+ALGL W Y+R EC LP +V G + G SVT
Sbjct 7 HRAAVLGSPIEHSKSPVLHNTGYKALGLDQWEYDRFECTGDMLPGIVSGADETYRGFSVT 66
Query 66 MPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAG------- 118
MP KFAAL FADE T RA +GSANTL+RT GWRADNTD+DG+ GALG G
Sbjct 67 MPSKFAALEFADEVTERARAIGSANTLLRTETGWRADNTDVDGIRGALGELLGSASLAGK 126
Query 119 HALVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGL 178
HA+V+GSGGTA A+ L E GV ITV+ R SD+ A L L + + +
Sbjct 127 HAIVIGSGGTARPAIWALIEAGVARITVLNR-SDRTAELQTLFDETPTTLAYAPLEHLDI 185
Query 179 ADAVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQ 238
A+V+VST+P+ AG TLA PV LD IYDPWPTPL + G + + G
Sbjct 186 -----EADVVVSTVPSAAIAGLEDTLAIAPV-LDVIYDPWPTPLVEVARAKGLKAVGGHV 239
Query 239 MLLHQAFAQVEQFTGLPAPREAMTCAL 265
ML HQ++ Q EQFTG+ APR+AM AL
Sbjct 240 MLAHQSYGQFEQFTGMDAPRDAMREAL 266
>gi|227549182|ref|ZP_03979231.1| shikimate 5-dehydrogenase [Corynebacterium lipophiloflavum DSM
44291]
gi|227078742|gb|EEI16705.1| shikimate 5-dehydrogenase [Corynebacterium lipophiloflavum DSM
44291]
Length=269
Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 145/265 (55%), Positives = 170/265 (65%), Gaps = 10/265 (3%)
Query 6 KKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVT 65
+A VLGSPI HS SP LH A Y A GL DW Y RIEC A ELP +VGG + G SVT
Sbjct 5 HRAAVLGSPIEHSLSPVLHNAGYAAAGLDDWQYSRIECTADELPAIVGGADESFRGFSVT 64
Query 66 MPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGHA----- 120
MP KFAAL FA E T RA +GSANTL R GWRADNTD +G+ GAL A G A
Sbjct 65 MPAKFAALEFATEATQRAAAIGSANTLTRIDGGWRADNTDCEGIVGALSALLGDAPIASS 124
Query 121 LVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGLAD 180
LV+G+GGTA A+ L E GV +TV+ R SD++A + L V RF +FD+ A
Sbjct 125 LVIGAGGTARPALWALGERGVRHLTVLNR-SDRSAEVRPLVRDAEV--RFASFDADITAL 181
Query 181 AVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQML 240
AV A+V+VST+PA V YAG LA PV +D IY PWPTPLA A + G + GL ML
Sbjct 182 AV-EADVIVSTVPAHVLTDYAGRLAHAPV-VDVIYKPWPTPLATAAAANGYTSVGGLVML 239
Query 241 LHQAFAQVEQFTGLPAPREAMTCAL 265
Q+F+Q EQFTG+ APREAM AL
Sbjct 240 AEQSFSQFEQFTGVAAPREAMREAL 264
>gi|302525840|ref|ZP_07278182.1| shikimate-5-dehydrogenase [Streptomyces sp. AA4]
gi|302434735|gb|EFL06551.1| shikimate-5-dehydrogenase [Streptomyces sp. AA4]
Length=287
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 147/271 (55%), Positives = 176/271 (65%), Gaps = 7/271 (2%)
Query 2 SEGPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVG 61
S+ P++A VLG P+AHS SP LH AA+ ALGL WTY+R+E AAELP V G GPEWVG
Sbjct 4 SDRPRRAAVLGKPVAHSLSPVLHRAAFAALGLDGWTYDRVETDAAELPGFVDGLGPEWVG 63
Query 62 VSVTMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAGH-- 119
+SVTMPGK AAL +A E T RA VG+ANTLVR P GW AD TD+DGV GAL A G+
Sbjct 64 LSVTMPGKRAALDYAAEVTPRAAAVGAANTLVRRPDGWLADCTDVDGVTGALKCAGGYSP 123
Query 120 -----ALVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFD 174
A+VLG+GGTA AAVV LA LGV + +V R +A+ VD R G+ +
Sbjct 124 SASDQAVVLGAGGTAAAAVVALAALGVARVRLVVREPARASETVDAAKRAGLDVDVLRWS 183
Query 175 SGGLADAVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVI 234
A+ VLV+T+P + + L+ I +LD IY PWPTPLA AVG GGR+
Sbjct 184 EADFAELADTTAVLVNTVPPDAVVPHLAELSRIGSVLDVIYHPWPTPLAEAVGQRGGRIA 243
Query 235 SGLQMLLHQAFAQVEQFTGLPAPREAMTCAL 265
+GL MLLHQAF Q E FTG PAPRE M AL
Sbjct 244 TGLDMLLHQAFGQAEHFTGQPAPREEMRVAL 274
>gi|19552841|ref|NP_600843.1| shikimate 5-dehydrogenase [Corynebacterium glutamicum ATCC 13032]
gi|62390512|ref|YP_225914.1| shikimate 5-dehydrogenase [Corynebacterium glutamicum ATCC 13032]
gi|21324398|dbj|BAB99022.1| Shikimate 5-dehydrogenase [Corynebacterium glutamicum ATCC 13032]
gi|41325849|emb|CAF21638.1| PROBABLE SHIKIMATE 5-DEHYDROGENASE PROTEIN [Corynebacterium glutamicum
ATCC 13032]
Length=276
Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 134/267 (51%), Positives = 163/267 (62%), Gaps = 14/267 (5%)
Query 6 KKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVT 65
+A VLGSPI HS+SP LH Y+ALGL W Y+R EC LP +V G + G SVT
Sbjct 7 HRAAVLGSPIEHSKSPVLHNTGYKALGLDQWEYDRFECTGDMLPGIVSGADETYCGFSVT 66
Query 66 MPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGAAAG------- 118
MP KFAAL FADE T RA +GSANTL+RT GWRADNTD+DG+ GALG G
Sbjct 67 MPSKFAALEFADEVTERACAIGSANTLLRTATGWRADNTDVDGIRGALGELLGGASLAGK 126
Query 119 HALVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLVDLGTRVGVATRFCAFDSGGL 178
HA+V+GSGGTA A+ L E GV ITV+ R SD+ A L L + + +
Sbjct 127 HAIVIGSGGTARPAIWALIEAGVARITVLNR-SDRTAELQTLFDETPTTLAYAPLEHLHI 185
Query 179 ADAVAAAEVLVSTIPAEVAAGYAGTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQ 238
A+V+VST+P+ AG TLA PV LD IYDPWPTPL + G + + G
Sbjct 186 -----EADVVVSTVPSAAIAGLEDTLAIAPV-LDVIYDPWPTPLVEVTRAKGLKAVGGHV 239
Query 239 MLLHQAFAQVEQFTGLPAPREAMTCAL 265
ML HQ++ Q EQFTG+ APR+AM AL
Sbjct 240 MLAHQSYGQFEQFTGMDAPRDAMREAL 266
Lambda K H
0.319 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 413610492504
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40