BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv2558
Length=236
Score E
Sequences producing significant alignments: (Bits) Value
gi|15609695|ref|NP_217074.1| hypothetical protein Rv2558 [Mycoba... 471 5e-131
gi|340627575|ref|YP_004746027.1| hypothetical protein MCAN_26001... 470 9e-131
gi|289444094|ref|ZP_06433838.1| conserved hypothetical protein [... 465 2e-129
gi|289762728|ref|ZP_06522106.1| conserved hypothetical protein [... 444 7e-123
gi|167968831|ref|ZP_02551108.1| hypothetical protein MtubH3_1269... 411 5e-113
gi|118464884|ref|YP_882615.1| hypothetical protein MAV_3433 [Myc... 379 3e-103
gi|336461497|gb|EGO40365.1| hypothetical protein MAPs_29850 [Myc... 377 7e-103
gi|342858623|ref|ZP_08715278.1| hypothetical protein MCOL_07096 ... 372 2e-101
gi|254821815|ref|ZP_05226816.1| hypothetical protein MintA_17917... 372 2e-101
gi|296170785|ref|ZP_06852357.1| conserved hypothetical protein [... 369 2e-100
gi|240170722|ref|ZP_04749381.1| hypothetical protein MkanA1_1551... 367 6e-100
gi|254232679|ref|ZP_04926006.1| conserved hypothetical protein [... 367 9e-100
gi|183982181|ref|YP_001850472.1| hypothetical protein MMAR_2168 ... 364 6e-99
gi|308232173|ref|ZP_07415169.2| hypothetical protein TMAG_02362 ... 362 4e-98
gi|118617372|ref|YP_905704.1| hypothetical protein MUL_1752 [Myc... 359 2e-97
gi|15609694|ref|NP_217073.1| hypothetical protein Rv2557 [Mycoba... 307 1e-81
gi|308232172|ref|ZP_07415168.2| hypothetical protein TMAG_02361 ... 292 3e-77
gi|167968832|ref|ZP_02551109.1| hypothetical protein MtubH3_1269... 288 5e-76
gi|294994332|ref|ZP_06800023.1| hypothetical protein Mtub2_07408... 275 3e-72
gi|108799311|ref|YP_639508.1| hypothetical protein Mmcs_2344 [My... 256 3e-66
gi|339295435|gb|AEJ47546.1| hypothetical protein CCDC5079_2356 [... 243 2e-62
gi|111024013|ref|YP_706985.1| hypothetical protein RHA1_ro07061 ... 240 1e-61
gi|254821814|ref|ZP_05226815.1| hypothetical protein MintA_17912... 231 9e-59
gi|323718830|gb|EGB27986.1| hypothetical protein TMMG_02568 [Myc... 223 2e-56
gi|226359891|ref|YP_002777669.1| hypothetical protein ROP_04770 ... 219 3e-55
gi|145225230|ref|YP_001135908.1| hypothetical protein Mflv_4652 ... 216 2e-54
gi|315445526|ref|YP_004078405.1| hypothetical protein Mspyr1_398... 209 2e-52
gi|284992199|ref|YP_003410753.1| hypothetical protein Gobs_3807 ... 208 7e-52
gi|258651154|ref|YP_003200310.1| hypothetical protein Namu_0911 ... 207 7e-52
gi|120405717|ref|YP_955546.1| hypothetical protein Mvan_4767 [My... 204 6e-51
gi|41407172|ref|NP_960008.1| hypothetical protein MAP1074c [Myco... 196 3e-48
gi|284990818|ref|YP_003409372.1| hypothetical protein Gobs_2322 ... 186 2e-45
gi|284992200|ref|YP_003410754.1| hypothetical protein Gobs_3808 ... 186 2e-45
gi|284992139|ref|YP_003410693.1| hypothetical protein Gobs_3744 ... 181 8e-44
gi|333991051|ref|YP_004523665.1| hypothetical protein JDM601_241... 181 9e-44
gi|119716601|ref|YP_923566.1| hypothetical protein Noca_2374 [No... 178 6e-43
gi|326332594|ref|ZP_08198862.1| hypothetical protein NBCG_04038 ... 172 3e-41
gi|339295434|gb|AEJ47545.1| hypothetical protein CCDC5079_2355 [... 168 5e-40
gi|41407173|ref|NP_960009.1| hypothetical protein MAP1075c [Myco... 151 9e-35
gi|258654035|ref|YP_003203191.1| hypothetical protein Namu_3909 ... 134 1e-29
gi|256391447|ref|YP_003113011.1| hypothetical protein Caci_2252 ... 52.8 4e-05
gi|254383707|ref|ZP_04999056.1| hypothetical protein SSAG_03358 ... 51.2 1e-04
gi|269836227|ref|YP_003318455.1| hypothetical protein Sthe_0194 ... 49.3 4e-04
gi|108805730|ref|YP_645667.1| antibiotic biosynthesis monooxygen... 48.5 8e-04
gi|325278849|ref|YP_004251391.1| TonB-dependent receptor plug [O... 37.7 1.6
gi|330921872|ref|XP_003299597.1| hypothetical protein PTT_10630 ... 36.2 3.7
gi|29827484|ref|NP_822118.1| type I polyketide synthase AVES 4 [... 36.2 4.1
gi|336276181|ref|XP_003352844.1| hypothetical protein SMAC_04958... 35.4 7.3
gi|238766992|dbj|BAH67487.1| polyketide synthase [Streptomyces s... 35.4 7.7
gi|189210597|ref|XP_001941630.1| peroxisomal multifunctional enz... 35.0 9.8
>gi|15609695|ref|NP_217074.1| hypothetical protein Rv2558 [Mycobacterium tuberculosis H37Rv]
gi|15842096|ref|NP_337133.1| hypothetical protein MT2635 [Mycobacterium tuberculosis CDC1551]
gi|31793741|ref|NP_856234.1| hypothetical protein Mb2588 [Mycobacterium bovis AF2122/97]
43 more sequence titles
Length=236
Score = 471 bits (1211), Expect = 5e-131, Method: Compositional matrix adjust.
Identities = 235/236 (99%), Positives = 236/236 (100%), Gaps = 0/236 (0%)
Query 1 LPGSAGWRKVFGGTGGATGALPRHGRGSIVYARSTTIEAQPLSVDIGIAHVRDVVMPALQ 60
+PGSAGWRKVFGGTGGATGALPRHGRGSIVYARSTTIEAQPLSVDIGIAHVRDVVMPALQ
Sbjct 1 MPGSAGWRKVFGGTGGATGALPRHGRGSIVYARSTTIEAQPLSVDIGIAHVRDVVMPALQ 60
Query 61 EIDGCVGVSLLVDRQSGRCIATSAWETLEAMRASVERVAPIRDRAALMFAGSARVEEWDI 120
EIDGCVGVSLLVDRQSGRCIATSAWETLEAMRASVERVAPIRDRAALMFAGSARVEEWDI
Sbjct 61 EIDGCVGVSLLVDRQSGRCIATSAWETLEAMRASVERVAPIRDRAALMFAGSARVEEWDI 120
Query 121 ALLHRDHPSHEGACVRATWLKVVPDQLGRSLEFYRTSVLPELESLDGFCSASLMVDHPAC 180
ALLHRDHPSHEGACVRATWLKVVPDQLGRSLEFYRTSVLPELESLDGFCSASLMVDHPAC
Sbjct 121 ALLHRDHPSHEGACVRATWLKVVPDQLGRSLEFYRTSVLPELESLDGFCSASLMVDHPAC 180
Query 181 RRAVSCSTFDSMDAMARNRDRASELRSRRVRELGAEVLDVAEFELAIAHLRVPELV 236
RRAVSCSTFDSMDAMARNRDRASELRSRRVRELGAEVLDVAEFELAIAHLRVPELV
Sbjct 181 RRAVSCSTFDSMDAMARNRDRASELRSRRVRELGAEVLDVAEFELAIAHLRVPELV 236
>gi|340627575|ref|YP_004746027.1| hypothetical protein MCAN_26001 [Mycobacterium canettii CIPT
140010059]
gi|340005765|emb|CCC44931.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=236
Score = 470 bits (1209), Expect = 9e-131, Method: Compositional matrix adjust.
Identities = 234/236 (99%), Positives = 236/236 (100%), Gaps = 0/236 (0%)
Query 1 LPGSAGWRKVFGGTGGATGALPRHGRGSIVYARSTTIEAQPLSVDIGIAHVRDVVMPALQ 60
+PGSAGWRKVFGGTGGATGALPRHGRGSIVYARSTTIEAQPLSVDIGIAHVRDVVMPALQ
Sbjct 1 MPGSAGWRKVFGGTGGATGALPRHGRGSIVYARSTTIEAQPLSVDIGIAHVRDVVMPALQ 60
Query 61 EIDGCVGVSLLVDRQSGRCIATSAWETLEAMRASVERVAPIRDRAALMFAGSARVEEWDI 120
EIDGCVGVSLLVDRQSGRCIATSAWETLEAMR+SVERVAPIRDRAALMFAGSARVEEWDI
Sbjct 61 EIDGCVGVSLLVDRQSGRCIATSAWETLEAMRSSVERVAPIRDRAALMFAGSARVEEWDI 120
Query 121 ALLHRDHPSHEGACVRATWLKVVPDQLGRSLEFYRTSVLPELESLDGFCSASLMVDHPAC 180
ALLHRDHPSHEGACVRATWLKVVPDQLGRSLEFYRTSVLPELESLDGFCSASLMVDHPAC
Sbjct 121 ALLHRDHPSHEGACVRATWLKVVPDQLGRSLEFYRTSVLPELESLDGFCSASLMVDHPAC 180
Query 181 RRAVSCSTFDSMDAMARNRDRASELRSRRVRELGAEVLDVAEFELAIAHLRVPELV 236
RRAVSCSTFDSMDAMARNRDRASELRSRRVRELGAEVLDVAEFELAIAHLRVPELV
Sbjct 181 RRAVSCSTFDSMDAMARNRDRASELRSRRVRELGAEVLDVAEFELAIAHLRVPELV 236
>gi|289444094|ref|ZP_06433838.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289417013|gb|EFD14253.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
Length=236
Score = 465 bits (1196), Expect = 2e-129, Method: Compositional matrix adjust.
Identities = 233/236 (99%), Positives = 235/236 (99%), Gaps = 0/236 (0%)
Query 1 LPGSAGWRKVFGGTGGATGALPRHGRGSIVYARSTTIEAQPLSVDIGIAHVRDVVMPALQ 60
+PGSAGWRKVFGGTGGATGALPRHGRGSIVYARSTTIEAQPLSVDIGIAHVRDVVMPALQ
Sbjct 1 MPGSAGWRKVFGGTGGATGALPRHGRGSIVYARSTTIEAQPLSVDIGIAHVRDVVMPALQ 60
Query 61 EIDGCVGVSLLVDRQSGRCIATSAWETLEAMRASVERVAPIRDRAALMFAGSARVEEWDI 120
EIDGCVGVSLLVDRQSGRCIATSAWETLEAMRASVERVAPIRDRAALMFAGSARVE+ DI
Sbjct 61 EIDGCVGVSLLVDRQSGRCIATSAWETLEAMRASVERVAPIRDRAALMFAGSARVEKCDI 120
Query 121 ALLHRDHPSHEGACVRATWLKVVPDQLGRSLEFYRTSVLPELESLDGFCSASLMVDHPAC 180
ALLHRDHPSHEGACVRATWLKVVPDQLGRSLEFYRTSVLPELESLDGFCSASLMVDHPAC
Sbjct 121 ALLHRDHPSHEGACVRATWLKVVPDQLGRSLEFYRTSVLPELESLDGFCSASLMVDHPAC 180
Query 181 RRAVSCSTFDSMDAMARNRDRASELRSRRVRELGAEVLDVAEFELAIAHLRVPELV 236
RRAVSCSTFDSMDAMARNRDRASELRSRRVRELGAEVLDVAEFELAIAHLRVPELV
Sbjct 181 RRAVSCSTFDSMDAMARNRDRASELRSRRVRELGAEVLDVAEFELAIAHLRVPELV 236
>gi|289762728|ref|ZP_06522106.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
gi|289710234|gb|EFD74250.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
Length=226
Score = 444 bits (1141), Expect = 7e-123, Method: Compositional matrix adjust.
Identities = 223/224 (99%), Positives = 223/224 (99%), Gaps = 0/224 (0%)
Query 13 GTGGATGALPRHGRGSIVYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLV 72
G GGATGALPRHGRGSIVYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLV
Sbjct 3 GPGGATGALPRHGRGSIVYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLV 62
Query 73 DRQSGRCIATSAWETLEAMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEG 132
DRQSGRCIATSAWETLEAMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEG
Sbjct 63 DRQSGRCIATSAWETLEAMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEG 122
Query 133 ACVRATWLKVVPDQLGRSLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSM 192
ACVRATWLKVVPDQLGRSLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSM
Sbjct 123 ACVRATWLKVVPDQLGRSLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSM 182
Query 193 DAMARNRDRASELRSRRVRELGAEVLDVAEFELAIAHLRVPELV 236
DAMARNRDRASELRSRRVRELGAEVLDVAEFELAIAHLRVPELV
Sbjct 183 DAMARNRDRASELRSRRVRELGAEVLDVAEFELAIAHLRVPELV 226
>gi|167968831|ref|ZP_02551108.1| hypothetical protein MtubH3_12690 [Mycobacterium tuberculosis
H37Ra]
gi|254551609|ref|ZP_05142056.1| hypothetical protein Mtube_14324 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|294994331|ref|ZP_06800022.1| hypothetical protein Mtub2_07403 [Mycobacterium tuberculosis
210]
6 more sequence titles
Length=207
Score = 411 bits (1056), Expect = 5e-113, Method: Compositional matrix adjust.
Identities = 206/207 (99%), Positives = 207/207 (100%), Gaps = 0/207 (0%)
Query 30 VYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLE 89
+YARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLE
Sbjct 1 MYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLE 60
Query 90 AMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLGR 149
AMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLGR
Sbjct 61 AMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLGR 120
Query 150 SLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAMARNRDRASELRSRR 209
SLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAMARNRDRASELRSRR
Sbjct 121 SLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAMARNRDRASELRSRR 180
Query 210 VRELGAEVLDVAEFELAIAHLRVPELV 236
VRELGAEVLDVAEFELAIAHLRVPELV
Sbjct 181 VRELGAEVLDVAEFELAIAHLRVPELV 207
>gi|118464884|ref|YP_882615.1| hypothetical protein MAV_3433 [Mycobacterium avium 104]
gi|254775879|ref|ZP_05217395.1| hypothetical protein MaviaA2_14585 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118166171|gb|ABK67068.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=207
Score = 379 bits (972), Expect = 3e-103, Method: Compositional matrix adjust.
Identities = 185/207 (90%), Positives = 198/207 (96%), Gaps = 0/207 (0%)
Query 30 VYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLE 89
+YARSTTI+AQPLS+DIGIAHVRDVVMPAL EIDGCVG+SLLVDRQSG CIATS+WE+++
Sbjct 1 MYARSTTIQAQPLSIDIGIAHVRDVVMPALTEIDGCVGLSLLVDRQSGTCIATSSWESID 60
Query 90 AMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLGR 149
AMR S RVAPIRDRAALMF GSARVEEWDIALLHRDHPS +GACVRATWLKVVPDQL R
Sbjct 61 AMRGSAARVAPIRDRAALMFDGSARVEEWDIALLHRDHPSRDGACVRATWLKVVPDQLSR 120
Query 150 SLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAMARNRDRASELRSRR 209
SLEFYR+SVLPELE LDGFCSASLMVDHPACRRAV+CSTFDSMDAMARNRDRA+ELRSRR
Sbjct 121 SLEFYRSSVLPELEQLDGFCSASLMVDHPACRRAVACSTFDSMDAMARNRDRATELRSRR 180
Query 210 VRELGAEVLDVAEFELAIAHLRVPELV 236
VRELGAEV+DVAEFELAIAHLRVPELV
Sbjct 181 VRELGAEVIDVAEFELAIAHLRVPELV 207
>gi|336461497|gb|EGO40365.1| hypothetical protein MAPs_29850 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=207
Score = 377 bits (968), Expect = 7e-103, Method: Compositional matrix adjust.
Identities = 184/207 (89%), Positives = 197/207 (96%), Gaps = 0/207 (0%)
Query 30 VYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLE 89
+YARSTTI+AQPLS+DIGIAH RDVVMPAL EIDGCVG+SLLVDRQSG CIATS+WE+++
Sbjct 1 MYARSTTIQAQPLSIDIGIAHARDVVMPALTEIDGCVGLSLLVDRQSGTCIATSSWESID 60
Query 90 AMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLGR 149
AMR S RVAPIRDRAALMF GSARVEEWDIALLHRDHPS +GACVRATWLKVVPDQL R
Sbjct 61 AMRGSAARVAPIRDRAALMFDGSARVEEWDIALLHRDHPSRDGACVRATWLKVVPDQLSR 120
Query 150 SLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAMARNRDRASELRSRR 209
SLEFYR+SVLPELE LDGFCSASLMVDHPACRRAV+CSTFDSMDAMARNRDRA+ELRSRR
Sbjct 121 SLEFYRSSVLPELEQLDGFCSASLMVDHPACRRAVACSTFDSMDAMARNRDRATELRSRR 180
Query 210 VRELGAEVLDVAEFELAIAHLRVPELV 236
VRELGAEV+DVAEFELAIAHLRVPELV
Sbjct 181 VRELGAEVIDVAEFELAIAHLRVPELV 207
>gi|342858623|ref|ZP_08715278.1| hypothetical protein MCOL_07096 [Mycobacterium colombiense CECT
3035]
gi|342134327|gb|EGT87507.1| hypothetical protein MCOL_07096 [Mycobacterium colombiense CECT
3035]
Length=207
Score = 372 bits (956), Expect = 2e-101, Method: Compositional matrix adjust.
Identities = 183/207 (89%), Positives = 196/207 (95%), Gaps = 0/207 (0%)
Query 30 VYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLE 89
+YARSTTI+AQPLSVDIGIAHVRDVVMPAL EIDGCVG+SLLVDRQSG CIATS+WET+E
Sbjct 1 MYARSTTIQAQPLSVDIGIAHVRDVVMPALTEIDGCVGLSLLVDRQSGTCIATSSWETME 60
Query 90 AMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLGR 149
AMR S E+VAPIRDRAALMF GSARVEEWDI LLHR HPS GACVRATWLKVVPDQL R
Sbjct 61 AMRGSAEQVAPIRDRAALMFDGSARVEEWDIPLLHRAHPSRPGACVRATWLKVVPDQLDR 120
Query 150 SLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAMARNRDRASELRSRR 209
SLEFYR +VLPE+++LDGFCSASLMVDHPACRRAV+CSTFDSM+AMARNRDRASELRSRR
Sbjct 121 SLEFYRMAVLPEMQNLDGFCSASLMVDHPACRRAVTCSTFDSMEAMARNRDRASELRSRR 180
Query 210 VRELGAEVLDVAEFELAIAHLRVPELV 236
VRELGAEV+DVAEFELAIAHLRVPELV
Sbjct 181 VRELGAEVIDVAEFELAIAHLRVPELV 207
>gi|254821815|ref|ZP_05226816.1| hypothetical protein MintA_17917 [Mycobacterium intracellulare
ATCC 13950]
Length=207
Score = 372 bits (955), Expect = 2e-101, Method: Compositional matrix adjust.
Identities = 181/207 (88%), Positives = 198/207 (96%), Gaps = 0/207 (0%)
Query 30 VYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLE 89
+YARSTTI+AQPLSVDIGIAHVRDVVMPAL+EIDG +G+SLLVDRQSG CIATS+WET+E
Sbjct 1 MYARSTTIQAQPLSVDIGIAHVRDVVMPALKEIDGWLGLSLLVDRQSGTCIATSSWETVE 60
Query 90 AMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLGR 149
AMR S ERVAPIRDRAALMF GSARVEEWDIALLHRDHPS +GACVRATWLKVVPDQL R
Sbjct 61 AMRGSAERVAPIRDRAALMFDGSARVEEWDIALLHRDHPSRQGACVRATWLKVVPDQLSR 120
Query 150 SLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAMARNRDRASELRSRR 209
SL+FYR +VLPE+E+LDGFCSASL+VDHP+CRRAV+CSTFDSMDAMARNRDRA+ELRSRR
Sbjct 121 SLDFYRMAVLPEMENLDGFCSASLLVDHPSCRRAVTCSTFDSMDAMARNRDRATELRSRR 180
Query 210 VRELGAEVLDVAEFELAIAHLRVPELV 236
VRELGAEV+DV EFELAIAHLRVPELV
Sbjct 181 VRELGAEVIDVGEFELAIAHLRVPELV 207
>gi|296170785|ref|ZP_06852357.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894600|gb|EFG74337.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=209
Score = 369 bits (947), Expect = 2e-100, Method: Compositional matrix adjust.
Identities = 182/207 (88%), Positives = 195/207 (95%), Gaps = 0/207 (0%)
Query 30 VYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLE 89
VYARSTTI+AQPLSVDIGIAHVRDVVMPAL EIDGCVG+SLLVDRQSG CIATS+W++++
Sbjct 3 VYARSTTIQAQPLSVDIGIAHVRDVVMPALMEIDGCVGLSLLVDRQSGTCIATSSWDSID 62
Query 90 AMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLGR 149
AMRA ERVAPIRDRAALMF GSARVEEWDIALLHRDH S GACVRATWLKVVPDQL R
Sbjct 63 AMRAGAERVAPIRDRAALMFDGSARVEEWDIALLHRDHRSRPGACVRATWLKVVPDQLNR 122
Query 150 SLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAMARNRDRASELRSRR 209
S++FYR SVLPE+ LDGFCSASL+VDHPACRRAVSCSTFDSMDAMARNRDRA+ELRSRR
Sbjct 123 SVDFYRMSVLPEMRDLDGFCSASLLVDHPACRRAVSCSTFDSMDAMARNRDRATELRSRR 182
Query 210 VRELGAEVLDVAEFELAIAHLRVPELV 236
VRELGAEV+DVAEFELAIAHLRVPELV
Sbjct 183 VRELGAEVVDVAEFELAIAHLRVPELV 209
>gi|240170722|ref|ZP_04749381.1| hypothetical protein MkanA1_15512 [Mycobacterium kansasii ATCC
12478]
Length=207
Score = 367 bits (943), Expect = 6e-100, Method: Compositional matrix adjust.
Identities = 178/207 (86%), Positives = 196/207 (95%), Gaps = 0/207 (0%)
Query 30 VYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLE 89
+YARSTTI+AQPLSVDIGIAHVRDVVMPALQ I+G VG+SLLVDRQSG CIATSAWETLE
Sbjct 1 MYARSTTIQAQPLSVDIGIAHVRDVVMPALQAINGYVGLSLLVDRQSGTCIATSAWETLE 60
Query 90 AMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLGR 149
AMRAS ERVAP+RDRAA+MF+G+ARVEEW+IA+LHRDH SH GACVRATWLKVVPDQ+ R
Sbjct 61 AMRASAERVAPVRDRAAMMFSGNARVEEWNIAMLHRDHHSHPGACVRATWLKVVPDQIER 120
Query 150 SLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAMARNRDRASELRSRR 209
SL+FY VLPE+E LDGFCSASLM+DHPACRRAVSC+TFD+MDAMARNRD+A+ELRSRR
Sbjct 121 SLDFYGMHVLPEMEGLDGFCSASLMIDHPACRRAVSCTTFDTMDAMARNRDQATELRSRR 180
Query 210 VRELGAEVLDVAEFELAIAHLRVPELV 236
VRELGAEVLDVAEFELAIAHLRVPELV
Sbjct 181 VRELGAEVLDVAEFELAIAHLRVPELV 207
>gi|254232679|ref|ZP_04926006.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|124601738|gb|EAY60748.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
Length=225
Score = 367 bits (942), Expect = 9e-100, Method: Compositional matrix adjust.
Identities = 185/185 (100%), Positives = 185/185 (100%), Gaps = 0/185 (0%)
Query 52 RDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLEAMRASVERVAPIRDRAALMFAG 111
RDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLEAMRASVERVAPIRDRAALMFAG
Sbjct 41 RDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLEAMRASVERVAPIRDRAALMFAG 100
Query 112 SARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLGRSLEFYRTSVLPELESLDGFCSA 171
SARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLGRSLEFYRTSVLPELESLDGFCSA
Sbjct 101 SARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLGRSLEFYRTSVLPELESLDGFCSA 160
Query 172 SLMVDHPACRRAVSCSTFDSMDAMARNRDRASELRSRRVRELGAEVLDVAEFELAIAHLR 231
SLMVDHPACRRAVSCSTFDSMDAMARNRDRASELRSRRVRELGAEVLDVAEFELAIAHLR
Sbjct 161 SLMVDHPACRRAVSCSTFDSMDAMARNRDRASELRSRRVRELGAEVLDVAEFELAIAHLR 220
Query 232 VPELV 236
VPELV
Sbjct 221 VPELV 225
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/94 (26%), Positives = 49/94 (53%), Gaps = 2/94 (2%)
Query 33 RSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSG-RCIATSAWETLEAM 91
R+T ++ P + + R V+P L+ +DG SL+VD + R ++ S +++++AM
Sbjct 125 RATWLKVVPDQLGRSLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAM 184
Query 92 RASVERVAPIRDRAALMFAGSA-RVEEWDIALLH 124
+ +R + +R R V E+++A+ H
Sbjct 185 ARNRDRASELRSRRVRELGAEVLDVAEFELAIAH 218
>gi|183982181|ref|YP_001850472.1| hypothetical protein MMAR_2168 [Mycobacterium marinum M]
gi|183175507|gb|ACC40617.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=250
Score = 364 bits (934), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 184/218 (85%), Positives = 199/218 (92%), Gaps = 1/218 (0%)
Query 19 GALPRHGRGSIVYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGR 78
GA P G IVYARSTTI+AQPLSVDIGIAHVRDVVMPALQ IDG VG+SLLVDRQSG
Sbjct 34 GAAPTE-EGPIVYARSTTIQAQPLSVDIGIAHVRDVVMPALQAIDGYVGLSLLVDRQSGT 92
Query 79 CIATSAWETLEAMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEGACVRAT 138
CIATSAWETL+AMR+S VAPIRDRAA+MF+G+ARVEEWDIA+LHRDH S +GACVRAT
Sbjct 93 CIATSAWETLQAMRSSAPAVAPIRDRAAMMFSGNARVEEWDIAMLHRDHRSRQGACVRAT 152
Query 139 WLKVVPDQLGRSLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAMARN 198
WLKVVPDQ+ RSL+FY VLPELE LDGFCSASLMVDHPACRRAVSC+TFD+M+AMARN
Sbjct 153 WLKVVPDQIERSLDFYGMYVLPELEGLDGFCSASLMVDHPACRRAVSCATFDTMEAMARN 212
Query 199 RDRASELRSRRVRELGAEVLDVAEFELAIAHLRVPELV 236
RD+ASELRSRRVRELGAEVLDVAEFELAIAHLRVPELV
Sbjct 213 RDQASELRSRRVRELGAEVLDVAEFELAIAHLRVPELV 250
>gi|308232173|ref|ZP_07415169.2| hypothetical protein TMAG_02362 [Mycobacterium tuberculosis SUMu001]
gi|308369753|ref|ZP_07418934.2| hypothetical protein TMBG_01098 [Mycobacterium tuberculosis SUMu002]
gi|308371055|ref|ZP_07423682.2| hypothetical protein TMCG_01803 [Mycobacterium tuberculosis SUMu003]
16 more sequence titles
Length=181
Score = 362 bits (928), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 181/181 (100%), Positives = 181/181 (100%), Gaps = 0/181 (0%)
Query 56 MPALQEIDGCVGVSLLVDRQSGRCIATSAWETLEAMRASVERVAPIRDRAALMFAGSARV 115
MPALQEIDGCVGVSLLVDRQSGRCIATSAWETLEAMRASVERVAPIRDRAALMFAGSARV
Sbjct 1 MPALQEIDGCVGVSLLVDRQSGRCIATSAWETLEAMRASVERVAPIRDRAALMFAGSARV 60
Query 116 EEWDIALLHRDHPSHEGACVRATWLKVVPDQLGRSLEFYRTSVLPELESLDGFCSASLMV 175
EEWDIALLHRDHPSHEGACVRATWLKVVPDQLGRSLEFYRTSVLPELESLDGFCSASLMV
Sbjct 61 EEWDIALLHRDHPSHEGACVRATWLKVVPDQLGRSLEFYRTSVLPELESLDGFCSASLMV 120
Query 176 DHPACRRAVSCSTFDSMDAMARNRDRASELRSRRVRELGAEVLDVAEFELAIAHLRVPEL 235
DHPACRRAVSCSTFDSMDAMARNRDRASELRSRRVRELGAEVLDVAEFELAIAHLRVPEL
Sbjct 121 DHPACRRAVSCSTFDSMDAMARNRDRASELRSRRVRELGAEVLDVAEFELAIAHLRVPEL 180
Query 236 V 236
V
Sbjct 181 V 181
Score = 37.0 bits (84), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/94 (26%), Positives = 49/94 (53%), Gaps = 2/94 (2%)
Query 33 RSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSG-RCIATSAWETLEAM 91
R+T ++ P + + R V+P L+ +DG SL+VD + R ++ S +++++AM
Sbjct 81 RATWLKVVPDQLGRSLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAM 140
Query 92 RASVERVAPIRDRAALMFAGSA-RVEEWDIALLH 124
+ +R + +R R V E+++A+ H
Sbjct 141 ARNRDRASELRSRRVRELGAEVLDVAEFELAIAH 174
>gi|118617372|ref|YP_905704.1| hypothetical protein MUL_1752 [Mycobacterium ulcerans Agy99]
gi|118569482|gb|ABL04233.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=273
Score = 359 bits (922), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 182/218 (84%), Positives = 197/218 (91%), Gaps = 1/218 (0%)
Query 19 GALPRHGRGSIVYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGR 78
GA P G IVYARSTTI+AQPLSVDIGIAHVRDVVMPALQ IDG VG+SLLVDRQSG
Sbjct 57 GAAPTE-EGPIVYARSTTIQAQPLSVDIGIAHVRDVVMPALQAIDGYVGLSLLVDRQSGT 115
Query 79 CIATSAWETLEAMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEGACVRAT 138
CIATSAWETL+AMR+ VAPIRDRAA+MF+ +ARVEEWDIA+LHRDH S +GACVRAT
Sbjct 116 CIATSAWETLQAMRSRAPAVAPIRDRAAMMFSDNARVEEWDIAMLHRDHRSRQGACVRAT 175
Query 139 WLKVVPDQLGRSLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAMARN 198
WLKVVPDQ+ RSL+FY VLPELE LDGFCSASLMVDHPACRRAVSC+TFD+M+AMARN
Sbjct 176 WLKVVPDQIERSLDFYGMYVLPELEGLDGFCSASLMVDHPACRRAVSCATFDTMEAMARN 235
Query 199 RDRASELRSRRVRELGAEVLDVAEFELAIAHLRVPELV 236
RD+ASELRSRRVRELGAEVLDVAEFELAIAHLRVPELV
Sbjct 236 RDQASELRSRRVRELGAEVLDVAEFELAIAHLRVPELV 273
>gi|15609694|ref|NP_217073.1| hypothetical protein Rv2557 [Mycobacterium tuberculosis H37Rv]
gi|15842095|ref|NP_337132.1| hypothetical protein MT2634 [Mycobacterium tuberculosis CDC1551]
gi|31793740|ref|NP_856233.1| hypothetical protein Mb2587 [Mycobacterium bovis AF2122/97]
53 more sequence titles
Length=224
Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 155/224 (70%), Positives = 183/224 (82%), Gaps = 2/224 (0%)
Query 14 TGGATGALPRHGR-GSIVYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLV 72
TGGATGALPR + G IVYARSTTI+AQ +D GIAHVRDVVMPALQ +DGC+GVSLLV
Sbjct 2 TGGATGALPRTMKEGWIVYARSTTIQAQSECIDTGIAHVRDVVMPALQGMDGCIGVSLLV 61
Query 73 DRQSGRCIATSAWETLEAMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEG 132
DRQSGRCIATSAWET EAM AS E+V PIRDR A MF G+ VEEW+IA +HRDH S EG
Sbjct 62 DRQSGRCIATSAWETAEAMHASREQVTPIRDRCAEMFGGTPAVEEWEIAAMHRDHRSAEG 121
Query 133 ACVRATWLKVVPDQLGRSLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSM 192
ACVRATW+KV DQ+ + +E+Y++SVLP++E LDGFCSASL+VD + RAVS +TFDS
Sbjct 122 ACVRATWVKVPADQVDQGIEYYKSSVLPQIEGLDGFCSASLLVDRTS-GRAVSSATFDSF 180
Query 193 DAMARNRDRASELRSRRVRELGAEVLDVAEFELAIAHLRVPELV 236
DAM RNRD+++ L++ +RE G E LD EFELA+AHLRVPELV
Sbjct 181 DAMERNRDQSNALKATSLREAGGEELDECEFELALAHLRVPELV 224
>gi|308232172|ref|ZP_07415168.2| hypothetical protein TMAG_02361 [Mycobacterium tuberculosis SUMu001]
gi|308369752|ref|ZP_07418933.2| hypothetical protein TMBG_01097 [Mycobacterium tuberculosis SUMu002]
gi|308371054|ref|ZP_07423681.2| hypothetical protein TMCG_01802 [Mycobacterium tuberculosis SUMu003]
17 more sequence titles
Length=212
Score = 292 bits (747), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 145/210 (70%), Positives = 172/210 (82%), Gaps = 1/210 (0%)
Query 27 GSIVYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWE 86
G IVYARSTTI+AQ +D GIAHVRDVVMPALQ +DGC+GVSLLVDRQSGRCIATSAWE
Sbjct 4 GWIVYARSTTIQAQSECIDTGIAHVRDVVMPALQGMDGCIGVSLLVDRQSGRCIATSAWE 63
Query 87 TLEAMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQ 146
T EAM AS E+V PIRDR A MF G+ VEEW+IA +HRDH S EGACVRATW+KV DQ
Sbjct 64 TAEAMHASREQVTPIRDRCAEMFGGTPAVEEWEIAAMHRDHRSAEGACVRATWVKVPADQ 123
Query 147 LGRSLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAMARNRDRASELR 206
+ + +E+Y++SVLP++E LDGFCSASL+VD + RAVS +TFDS DAM RNRD+++ L+
Sbjct 124 VDQGIEYYKSSVLPQIEGLDGFCSASLLVDRTS-GRAVSSATFDSFDAMERNRDQSNALK 182
Query 207 SRRVRELGAEVLDVAEFELAIAHLRVPELV 236
+ +RE G E LD EFELA+AHLRVPELV
Sbjct 183 ATSLREAGGEELDECEFELALAHLRVPELV 212
>gi|167968832|ref|ZP_02551109.1| hypothetical protein MtubH3_12695 [Mycobacterium tuberculosis
H37Ra]
Length=206
Score = 288 bits (737), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 142/207 (69%), Positives = 170/207 (83%), Gaps = 1/207 (0%)
Query 30 VYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLE 89
+YARSTTI+AQ +D GIAHVRDVVMPALQ +DGC+GVSLLVDRQSGRCIATSAWET E
Sbjct 1 MYARSTTIQAQSECIDTGIAHVRDVVMPALQGMDGCIGVSLLVDRQSGRCIATSAWETAE 60
Query 90 AMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLGR 149
AM AS E+V PIRDR A MF G+ VEEW+IA +HRDH S EGACVRATW+KV DQ+ +
Sbjct 61 AMHASREQVTPIRDRCAEMFGGTPAVEEWEIAAMHRDHRSAEGACVRATWVKVPADQVDQ 120
Query 150 SLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAMARNRDRASELRSRR 209
+E+Y++SVLP++E LDGFCSASL+VD + RAVS +TFDS DAM RNRD+++ L++
Sbjct 121 GIEYYKSSVLPQIEGLDGFCSASLLVDRTS-GRAVSSATFDSFDAMERNRDQSNALKATS 179
Query 210 VRELGAEVLDVAEFELAIAHLRVPELV 236
+RE G E LD EFELA+AHLRVPELV
Sbjct 180 LREAGGEELDECEFELALAHLRVPELV 206
>gi|294994332|ref|ZP_06800023.1| hypothetical protein Mtub2_07408 [Mycobacterium tuberculosis
210]
Length=225
Score = 275 bits (704), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 147/225 (66%), Positives = 173/225 (77%), Gaps = 3/225 (1%)
Query 14 TGGATGALPRHGR-GSIVYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLV 72
TGGATGALPR + G IVYARSTTI+AQ +D GIAHVRDVVMPALQ +DGC+GVSLLV
Sbjct 2 TGGATGALPRTMKEGWIVYARSTTIQAQSECIDTGIAHVRDVVMPALQGMDGCIGVSLLV 61
Query 73 DRQSGRCIATSAWETLEAMRASVERVAPIRDRAALMFAGS-ARVEEWDIALLHRDHPSHE 131
DRQSGRCIATSAWET EAM AS E+V PIRDR A MF G+ R D S E
Sbjct 62 DRQSGRCIATSAWETAEAMHASREQVTPIRDRCAEMFGGTPGRRGVGDRGECIATTGSAE 121
Query 132 GACVRATWLKVVPDQLGRSLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDS 191
GACVRATW+KV DQ+ + +E+Y++SVLP++E LDGFCSASL+VD + RAVS +TFDS
Sbjct 122 GACVRATWVKVPADQVDQGIEYYKSSVLPQIEGLDGFCSASLLVDRTS-GRAVSSATFDS 180
Query 192 MDAMARNRDRASELRSRRVRELGAEVLDVAEFELAIAHLRVPELV 236
DAM RNRD+++ L++ +RE G E LD EFELA+AHLRVPELV
Sbjct 181 FDAMERNRDQSNALKATSLREAGGEELDECEFELALAHLRVPELV 225
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/128 (29%), Positives = 67/128 (53%), Gaps = 9/128 (7%)
Query 9 KVFGGTGGATGALPR------HGRGSIVYARSTTIEAQPLSVDIGIAHVRDVVMPALQEI 62
++FGGT G G R G R+T ++ VD GI + + V+P ++ +
Sbjct 96 EMFGGTPGRRGVGDRGECIATTGSAEGACVRATWVKVPADQVDQGIEYYKSSVLPQIEGL 155
Query 63 DGCVGVSLLVDRQSGRCIATSAWETLEAMRASVERVAPIRDRAALMFAGSARVE--EWDI 120
DG SLLVDR SGR ++++ +++ +AM + ++ ++ +L AG ++ E+++
Sbjct 156 DGFCSASLLVDRTSGRAVSSATFDSFDAMERNRDQSNALK-ATSLREAGGEELDECEFEL 214
Query 121 ALLHRDHP 128
AL H P
Sbjct 215 ALAHLRVP 222
>gi|108799311|ref|YP_639508.1| hypothetical protein Mmcs_2344 [Mycobacterium sp. MCS]
gi|119868427|ref|YP_938379.1| hypothetical protein Mkms_2391 [Mycobacterium sp. KMS]
gi|126434969|ref|YP_001070660.1| hypothetical protein Mjls_2385 [Mycobacterium sp. JLS]
gi|108769730|gb|ABG08452.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119694516|gb|ABL91589.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126234769|gb|ABN98169.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=206
Score = 256 bits (653), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 124/206 (61%), Positives = 167/206 (82%), Gaps = 1/206 (0%)
Query 30 VYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLE 89
++AR+TTIEA+P +VD G+AH+R+ VMP L+++DGCVG+SLLVDR+S RCIAT+AWE++E
Sbjct 1 MFARTTTIEARPDAVDAGVAHIRNEVMPVLRDVDGCVGLSLLVDRESSRCIATTAWESVE 60
Query 90 AMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLGR 149
AM A+ ERV P+R+RAA +F G+ V+EW+IA+LHR+H + GA VRATWL+ P+Q +
Sbjct 61 AMHAAEERVRPVRERAAEVFGGTPVVDEWEIAVLHREHRAGAGAGVRATWLRARPEQFDQ 120
Query 150 SLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAMARNRDRASELRSRR 209
++ FYR+ VLP +E LDGFCSASLM+D + RAVS +FDSM AM R RD+A LR+ R
Sbjct 121 AVAFYRSEVLPSIEELDGFCSASLMIDRTSG-RAVSSVSFDSMGAMDRTRDQARSLRTAR 179
Query 210 VRELGAEVLDVAEFELAIAHLRVPEL 235
+R+LGA+ LDV EFEL IA+LRVPE+
Sbjct 180 LRDLGADQLDVGEFELVIANLRVPEM 205
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/108 (34%), Positives = 59/108 (55%), Gaps = 10/108 (9%)
Query 9 KVFGGT----GGATGALPR-HGRGSIVYARSTTIEAQPLSVDIGIAHVRDVVMPALQEID 63
+VFGGT L R H G+ R+T + A+P D +A R V+P+++E+D
Sbjct 78 EVFGGTPVVDEWEIAVLHREHRAGAGAGVRATWLRARPEQFDQAVAFYRSEVLPSIEELD 137
Query 64 GCVGVSLLVDRQSGRCIATSAWETLEAM-----RASVERVAPIRDRAA 106
G SL++DR SGR +++ +++++ AM +A R A +RD A
Sbjct 138 GFCSASLMIDRTSGRAVSSVSFDSMGAMDRTRDQARSLRTARLRDLGA 185
>gi|339295435|gb|AEJ47546.1| hypothetical protein CCDC5079_2356 [Mycobacterium tuberculosis
CCDC5079]
Length=143
Score = 243 bits (619), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/138 (89%), Positives = 123/138 (90%), Gaps = 0/138 (0%)
Query 30 VYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLE 89
+YARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLE
Sbjct 1 MYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLE 60
Query 90 AMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLGR 149
AMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLGR
Sbjct 61 AMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLGR 120
Query 150 SLEFYRTSVLPELESLDG 167
S P G
Sbjct 121 SWSSTARPYFPSWRVWTG 138
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/94 (26%), Positives = 49/94 (53%), Gaps = 2/94 (2%)
Query 136 RATWLKVVPDQLGRSLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAM 195
R+T ++ P + + R V+P L+ +DG SL+VD + R ++ S +++++AM
Sbjct 4 RSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSG-RCIATSAWETLEAM 62
Query 196 ARNRDRASELRSRRVRELGAEVLDVAEFELAIAH 229
+ +R + +R R V E+++A+ H
Sbjct 63 RASVERVAPIRDRAALMFAGSA-RVEEWDIALLH 95
>gi|111024013|ref|YP_706985.1| hypothetical protein RHA1_ro07061 [Rhodococcus jostii RHA1]
gi|110823543|gb|ABG98827.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=209
Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/207 (58%), Positives = 151/207 (73%), Gaps = 1/207 (0%)
Query 29 IVYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETL 88
IV+ARSTTI+A P +D GI HVRD VMPAL +++GC+G+SLL+DR SGRCIATS+W
Sbjct 3 IVFARSTTIQAHPSYIDAGIKHVRDTVMPALADVEGCLGMSLLIDRSSGRCIATSSWRDE 62
Query 89 EAMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLG 148
E++RAS V +RD AA +F G+ V WDIA++HRDH S GAC R TW+K P +
Sbjct 63 ESLRASEGPVLKLRDVAAEVFHGTTEVSRWDIAVMHRDHHSDRGACCRVTWVKTEPAHMD 122
Query 149 RSLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAMARNRDRASELRSR 208
R+++ ++ + LP++E LDGFCSASLM+DH A R VS TFDS +AM RNR+R +R
Sbjct 123 RAVDVWKMAALPKMEELDGFCSASLMLDH-AAGRGVSSLTFDSSEAMERNRERIDRIRDE 181
Query 209 RVRELGAEVLDVAEFELAIAHLRVPEL 235
VRE AEVLD EFELAIAHL VPE+
Sbjct 182 GVREANAEVLDTCEFELAIAHLHVPEM 208
>gi|254821814|ref|ZP_05226815.1| hypothetical protein MintA_17912 [Mycobacterium intracellulare
ATCC 13950]
Length=180
Score = 231 bits (588), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 116/181 (65%), Positives = 146/181 (81%), Gaps = 1/181 (0%)
Query 56 MPALQEIDGCVGVSLLVDRQSGRCIATSAWETLEAMRASVERVAPIRDRAALMFAGSARV 115
MPALQ + GC+GVSLLVDR+SGRCIATSAWE+ EAMRAS E V IRDRAA MF G+ V
Sbjct 1 MPALQGMPGCIGVSLLVDRRSGRCIATSAWESDEAMRASGEAVTGIRDRAAEMFGGTTDV 60
Query 116 EEWDIALLHRDHPSHEGACVRATWLKVVPDQLGRSLEFYRTSVLPELESLDGFCSASLMV 175
E+W+IA+LHRDH + +GA VRATW+ V P+ + + +E+Y++SVLP+LE LDGFCSASL++
Sbjct 61 EQWEIAVLHRDHHAPDGAGVRATWVMVPPETMDQGIEYYKSSVLPQLEGLDGFCSASLLI 120
Query 176 DHPACRRAVSCSTFDSMDAMARNRDRASELRSRRVRELGAEVLDVAEFELAIAHLRVPEL 235
D A R VS +TFDS+DAM RNR++A+ L+S ++E AE LD EFELA+AHLRVPEL
Sbjct 121 DR-ASGRGVSSATFDSIDAMERNREQATALKSSSMQEARAEELDECEFELALAHLRVPEL 179
Query 236 V 236
V
Sbjct 180 V 180
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/97 (31%), Positives = 55/97 (57%), Gaps = 9/97 (9%)
Query 33 RSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLEAMR 92
R+T + P ++D GI + + V+P L+ +DG SLL+DR SGR ++++ +++++AM
Sbjct 81 RATWVMVPPETMDQGIEYYKSSVLPQLEGLDGFCSASLLIDRASGRGVSSATFDSIDAME 140
Query 93 ASVERVAPIRDRAALMFAGSARVEEWD-----IALLH 124
+ E+ ++ + AR EE D +AL H
Sbjct 141 RNREQATALKSSSMQ----EARAEELDECEFELALAH 173
>gi|323718830|gb|EGB27986.1| hypothetical protein TMMG_02568 [Mycobacterium tuberculosis CDC1551A]
Length=165
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 110/166 (67%), Positives = 134/166 (81%), Gaps = 1/166 (0%)
Query 71 LVDRQSGRCIATSAWETLEAMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSH 130
+VDRQSGRCIATSAWET EAM AS E+V PIRDR A MF G+ VEEW+IA +HRDH S
Sbjct 1 MVDRQSGRCIATSAWETAEAMHASREQVTPIRDRCAEMFGGTPAVEEWEIAAMHRDHRSA 60
Query 131 EGACVRATWLKVVPDQLGRSLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFD 190
EGACVRATW+KV DQ+ + +E+Y++SVLP++E LDGFCSASL+VD + RAVS +TFD
Sbjct 61 EGACVRATWVKVPADQVDQGIEYYKSSVLPQIEGLDGFCSASLLVDRTS-GRAVSSATFD 119
Query 191 SMDAMARNRDRASELRSRRVRELGAEVLDVAEFELAIAHLRVPELV 236
S DAM RNRD+++ L++ +RE G E LD EFELA+AHLRVPELV
Sbjct 120 SFDAMERNRDQSNALKATSLREAGGEELDECEFELALAHLRVPELV 165
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/123 (29%), Positives = 66/123 (54%), Gaps = 8/123 (6%)
Query 9 KVFGGTGGAT----GALPR-HGRGSIVYARSTTIEAQPLSVDIGIAHVRDVVMPALQEID 63
++FGGT A+ R H R+T ++ VD GI + + V+P ++ +D
Sbjct 37 EMFGGTPAVEEWEIAAMHRDHRSAEGACVRATWVKVPADQVDQGIEYYKSSVLPQIEGLD 96
Query 64 GCVGVSLLVDRQSGRCIATSAWETLEAMRASVERVAPIRDRAALMFAGSARVE--EWDIA 121
G SLLVDR SGR ++++ +++ +AM + ++ ++ +L AG ++ E+++A
Sbjct 97 GFCSASLLVDRTSGRAVSSATFDSFDAMERNRDQSNALK-ATSLREAGGEELDECEFELA 155
Query 122 LLH 124
L H
Sbjct 156 LAH 158
>gi|226359891|ref|YP_002777669.1| hypothetical protein ROP_04770 [Rhodococcus opacus B4]
gi|226238376|dbj|BAH48724.1| hypothetical protein [Rhodococcus opacus B4]
Length=222
Score = 219 bits (557), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/207 (58%), Positives = 139/207 (68%), Gaps = 1/207 (0%)
Query 29 IVYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETL 88
IVYARS+T +A P +D GI HVRD VMPAL +I G G+SLLVDR SGRCIATS+W
Sbjct 16 IVYARSSTFDAHPSFIDEGIKHVRDTVMPALADIAGSAGMSLLVDRGSGRCIATSSWTDD 75
Query 89 EAMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLG 148
EA+RAS V +RDR A +F +A V WDIA LHRDH SH GA VR WL V P L
Sbjct 76 EALRASEAPVRQLRDRMAEVFHATATVARWDIAALHRDHRSHHGAWVRVAWLDVEPGHLD 135
Query 149 RSLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAMARNRDRASELRSR 208
R ++ Y+ S LP + L GFCSASL+VD PA R VS TFDS A A RD + +
Sbjct 136 RVIDVYKMSSLPAMHELAGFCSASLLVD-PAAGRVVSSMTFDSAPAEAGARDAVESIGTS 194
Query 209 RVRELGAEVLDVAEFELAIAHLRVPEL 235
+RE GA +L+V EFELAIAHL VPE+
Sbjct 195 EIRESGARLLEVGEFELAIAHLHVPEM 221
>gi|145225230|ref|YP_001135908.1| hypothetical protein Mflv_4652 [Mycobacterium gilvum PYR-GCK]
gi|145217716|gb|ABP47120.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=224
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/222 (51%), Positives = 150/222 (68%), Gaps = 2/222 (0%)
Query 14 TGGATGALPRHGRGSIVYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVD 73
+GGA G LPR + YARS+T+ A+ +VD GI ++ D V P L E+DG VG+SLLVD
Sbjct 4 SGGAAGTLPRPTEADM-YARSSTVHARSSAVDAGITYIHDTVWPGLTELDGYVGLSLLVD 62
Query 74 RQSGRCIATSAWETLEAMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEGA 133
RQ+GRCI T+AW++ EAM AS RD AA + GS V+EW+IA LHRDH S GA
Sbjct 63 RQTGRCIVTTAWDSEEAMHASRRTADTYRDHAAEILGGSPTVDEWEIAALHRDHRSSPGA 122
Query 134 CVRATWLKVVPDQLGRSLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMD 193
CVR TW +V + + R+++ +R + +P LE LDGFCSASLMVD + V+ FDS +
Sbjct 123 CVRVTWARVAHENVERAVDGFRLATIPALEELDGFCSASLMVDRDSG-FGVASVAFDSAE 181
Query 194 AMARNRDRASELRSRRVRELGAEVLDVAEFELAIAHLRVPEL 235
A+ RNR ELRS +R+ GAE+LD + +L +AHLRVPE+
Sbjct 182 ALRRNRQAMEELRSATIRDAGAEILDECDCDLVLAHLRVPEM 223
>gi|315445526|ref|YP_004078405.1| hypothetical protein Mspyr1_39820 [Mycobacterium sp. Spyr1]
gi|315263829|gb|ADU00571.1| hypothetical protein Mspyr1_39820 [Mycobacterium sp. Spyr1]
Length=206
Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/206 (52%), Positives = 143/206 (70%), Gaps = 1/206 (0%)
Query 30 VYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLE 89
+YARS+T+ A+ +VD GI ++ D V P L E+DG VG+SLLVDRQ+GRCI T+AW++ E
Sbjct 1 MYARSSTVHARSSAVDAGITYIHDTVWPGLTELDGYVGLSLLVDRQTGRCIVTTAWDSEE 60
Query 90 AMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLGR 149
AM AS RD AA + GS V+EW+IA LHRDH S GACVR TW +V + + R
Sbjct 61 AMHASRRTADTYRDHAAEILGGSPTVDEWEIAALHRDHRSSPGACVRVTWARVAHENVER 120
Query 150 SLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAMARNRDRASELRSRR 209
+++ +R + +P LE LDGFCSASLMVD + V+ TFDS +A+ RNR ELRS
Sbjct 121 AVDGFRLATIPALEELDGFCSASLMVDRDSG-FGVASVTFDSAEALRRNRQAMEELRSAT 179
Query 210 VRELGAEVLDVAEFELAIAHLRVPEL 235
+R+ GAE+LD + +L +AHLRVPE+
Sbjct 180 IRDAGAEILDECDCDLVLAHLRVPEM 205
>gi|284992199|ref|YP_003410753.1| hypothetical protein Gobs_3807 [Geodermatophilus obscurus DSM
43160]
gi|284065444|gb|ADB76382.1| conserved hypothetical protein [Geodermatophilus obscurus DSM
43160]
Length=206
Score = 208 bits (529), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 105/205 (52%), Positives = 137/205 (67%), Gaps = 1/205 (0%)
Query 30 VYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLE 89
+YARSTTI P SVD G +VRD VMPA++ +DGC+G+S+L D +SG CI T++W E
Sbjct 1 MYARSTTIRGNPRSVDRGTDYVRDEVMPAVRGMDGCIGLSMLADHESGMCIVTTSWRDRE 60
Query 90 AMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLGR 149
AM+AS E V P+RDRA +F G V EW+++ +HR H +H GAC R TWL+ PD + R
Sbjct 61 AMQASAEGVRPLRDRAREVFGGEVEVHEWEVSAMHRRHEAHHGACTRVTWLRGAPDDMER 120
Query 150 SLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAMARNRDRASELRSRR 209
S++ +R S++P L+ L GFCS SLM H A AVS T+DS + M R+ A LR
Sbjct 121 SIDAFRMSLMPRLDDLAGFCSVSLMT-HAAEGMAVSAVTYDSREDMIETREHARALRDEF 179
Query 210 VRELGAEVLDVAEFELAIAHLRVPE 234
V LG V DV EF+L +AHLRVPE
Sbjct 180 VPALGLAVTDVREFDLVLAHLRVPE 204
>gi|258651154|ref|YP_003200310.1| hypothetical protein Namu_0911 [Nakamurella multipartita DSM
44233]
gi|258554379|gb|ACV77321.1| hypothetical protein Namu_0911 [Nakamurella multipartita DSM
44233]
Length=206
Score = 207 bits (528), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 107/206 (52%), Positives = 141/206 (69%), Gaps = 1/206 (0%)
Query 30 VYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLE 89
+YARSTT +A+ S+D GI +R V PA Q + GC+G+S++ DR SGRCI TS+W+++
Sbjct 1 MYARSTTFQARARSMDAGIDLLRAEVAPAFQAMPGCLGISMMADRLSGRCIVTSSWDSMT 60
Query 90 AMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLGR 149
MRAS VA +R RA ++ G VEEW+IA +HR H +GACVRATW+ P L R
Sbjct 61 DMRASDAAVASMRTRAGVLLGGLPFVEEWEIAAMHRHHHCQQGACVRATWMHGAPADLER 120
Query 150 SLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAMARNRDRASELRSRR 209
S++ YR +P +ESLDGFCSASL VD + RAV +T+DS + M RD A ELR R
Sbjct 121 SIDVYRMVAMPAMESLDGFCSASLFVDR-STGRAVLSATYDSPELMMATRDSARELRMRT 179
Query 210 VRELGAEVLDVAEFELAIAHLRVPEL 235
R+ ++LDVAEF+L IAHLRVPE+
Sbjct 180 ARDARVDILDVAEFDLLIAHLRVPEM 205
>gi|120405717|ref|YP_955546.1| hypothetical protein Mvan_4767 [Mycobacterium vanbaalenii PYR-1]
gi|119958535|gb|ABM15540.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=206
Score = 204 bits (520), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 105/207 (51%), Positives = 144/207 (70%), Gaps = 1/207 (0%)
Query 30 VYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLE 89
+YAR+TT+ +P S+D GIA++R VMP LQ + G VG SLL DR+SGRCIA SAW+T +
Sbjct 1 MYARTTTVWGRPSSIDDGIANMRGSVMPELQRMHGFVGFSLLADRESGRCIAASAWQTED 60
Query 90 AMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLGR 149
AMRAS V +RDRAA + G+ V +W+IA++HR H S EGACVR +W+KV P +
Sbjct 61 AMRASAPLVVEVRDRAAQILGGTVDVADWEIAVMHRHHESAEGACVRVSWVKVDPSHVES 120
Query 150 SLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAMARNRDRASELRSRR 209
++ ++ SVLP LE L+G CS SL+V+ A AV + +DS +A+ +R + LR
Sbjct 121 GIDLFKHSVLPALEELEGHCSTSLLVNR-ATGAAVISTAYDSAEALQHHRPQLDRLRDAT 179
Query 210 VRELGAEVLDVAEFELAIAHLRVPELV 236
V + GA++L+ +FELAIAHLRVPELV
Sbjct 180 VEQAGAQMLEECDFELAIAHLRVPELV 206
>gi|41407172|ref|NP_960008.1| hypothetical protein MAP1074c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395523|gb|AAS03391.1| hypothetical protein MAP_1074c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=102
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/102 (94%), Positives = 100/102 (99%), Gaps = 0/102 (0%)
Query 135 VRATWLKVVPDQLGRSLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDA 194
+RATWLKVVPDQL RSLEFYR+SVLPELE LDGFCSASLMVDHPACRRAV+CSTFDSMDA
Sbjct 1 MRATWLKVVPDQLSRSLEFYRSSVLPELEQLDGFCSASLMVDHPACRRAVACSTFDSMDA 60
Query 195 MARNRDRASELRSRRVRELGAEVLDVAEFELAIAHLRVPELV 236
MARNRDRA+ELRSRRVRELGAEV+DVAEFELAIAHLRVPELV
Sbjct 61 MARNRDRATELRSRRVRELGAEVIDVAEFELAIAHLRVPELV 102
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/94 (27%), Positives = 49/94 (53%), Gaps = 2/94 (2%)
Query 33 RSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSG-RCIATSAWETLEAM 91
R+T ++ P + + R V+P L+++DG SL+VD + R +A S +++++AM
Sbjct 2 RATWLKVVPDQLSRSLEFYRSSVLPELEQLDGFCSASLMVDHPACRRAVACSTFDSMDAM 61
Query 92 RASVERVAPIRDRAALMFAGSA-RVEEWDIALLH 124
+ +R +R R V E+++A+ H
Sbjct 62 ARNRDRATELRSRRVRELGAEVIDVAEFELAIAH 95
>gi|284990818|ref|YP_003409372.1| hypothetical protein Gobs_2322 [Geodermatophilus obscurus DSM
43160]
gi|284064063|gb|ADB75001.1| conserved hypothetical protein [Geodermatophilus obscurus DSM
43160]
Length=207
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/207 (46%), Positives = 141/207 (69%), Gaps = 2/207 (0%)
Query 30 VYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLE 89
+YAR+TT+ P +VD GIA +RD V P +Q +DGC+G+S+L DR++GRCI T+AW + +
Sbjct 1 MYARTTTVRGDPRAVDDGIAFIRDDVWPRVQRMDGCIGMSMLADREAGRCIVTAAWASED 60
Query 90 AMRASVERVAPIRDRAA-LMFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLG 148
AMRAS V R +AA ++ A + + EW+IA+LHR P+ + ACVRATW+ + Q+
Sbjct 61 AMRASATEVQESRRQAAEVLRAETVDIAEWEIAVLHRSRPAGDAACVRATWVDIPAGQVD 120
Query 149 RSLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAMARNRDRASELRSR 208
++ +R S+LP LE L GFCS SL+VD RAV+ T++ A+ R R++ + LR
Sbjct 121 GMIDAFRMSLLPRLEDLPGFCSVSLLVDRLGS-RAVAAVTYEDRAALERTREQGAALREE 179
Query 209 RVRELGAEVLDVAEFELAIAHLRVPEL 235
R +G+ + +VAEF+LA+AHL VPE+
Sbjct 180 FSRAMGSTITEVAEFDLAMAHLHVPEM 206
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/103 (31%), Positives = 51/103 (50%), Gaps = 1/103 (0%)
Query 27 GSIVYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWE 86
G R+T ++ VD I R ++P L+++ G VSLLVDR R +A +E
Sbjct 102 GDAACVRATWVDIPAGQVDGMIDAFRMSLLPRLEDLPGFCSVSLLVDRLGSRAVAAVTYE 161
Query 87 TLEAMRASVERVAPIRDRAA-LMFAGSARVEEWDIALLHRDHP 128
A+ + E+ A +R+ + M + V E+D+A+ H P
Sbjct 162 DRAALERTREQGAALREEFSRAMGSTITEVAEFDLAMAHLHVP 204
>gi|284992200|ref|YP_003410754.1| hypothetical protein Gobs_3808 [Geodermatophilus obscurus DSM
43160]
gi|284065445|gb|ADB76383.1| conserved hypothetical protein [Geodermatophilus obscurus DSM
43160]
Length=206
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/205 (46%), Positives = 138/205 (68%), Gaps = 1/205 (0%)
Query 30 VYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLE 89
+YAR+ T+ P +VD G+A +RD VMPA++ + G VG+S+L DR SGRCIAT++W
Sbjct 1 MYARTVTVHGNPKAVDDGVAFLRDRVMPAVEGLPGYVGLSMLADRDSGRCIATTSWADEA 60
Query 90 AMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLGR 149
AM A+ E++ P+R R A + G ++ W+IA+LHR H + +GAC R TW++ PD++ +
Sbjct 61 AMSATGEQLRPLRARFAQILGGPPELQTWEIAVLHRVHEAPDGACTRVTWMRTDPDRVEQ 120
Query 150 SLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAMARNRDRASELRSRR 209
L+ YR S+LP LE +DGFCSASL+VD R A S T+ ++ R+R A+ +R
Sbjct 121 VLDAYRLSLLPRLEEVDGFCSASLLVDRWEGRGAGSV-TYADRASLERSRTDATAVREEF 179
Query 210 VRELGAEVLDVAEFELAIAHLRVPE 234
+G +L+VAEF+L +AHLRVPE
Sbjct 180 AAAMGGRILEVAEFDLVLAHLRVPE 204
>gi|284992139|ref|YP_003410693.1| hypothetical protein Gobs_3744 [Geodermatophilus obscurus DSM
43160]
gi|284065384|gb|ADB76322.1| conserved hypothetical protein [Geodermatophilus obscurus DSM
43160]
Length=207
Score = 181 bits (459), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 93/208 (45%), Positives = 138/208 (67%), Gaps = 2/208 (0%)
Query 30 VYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLE 89
+YARST+I ++D GIA+VRD VMPA+ +++GCVG+SLL DR+SGRCI ++W +
Sbjct 1 MYARSTSIRGNLSNLDAGIAYVRDEVMPAVPKMEGCVGLSLLADRESGRCIVATSWVDEQ 60
Query 90 AMRASVERVAPIRDRAALMFAGS-ARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLG 148
AMRA+ ++ R G A V+EW+IA+LHRD P+ +GA + TW ++ P+ L
Sbjct 61 AMRATAHEDRTVQHRLMHTLGGEHADVQEWEIAVLHRDRPAGDGAGAQVTWARIAPNHLD 120
Query 149 RSLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAMARNRDRASELRSR 208
L+ YR ++LP+L+ L GFCS S++VD R VS ++F++ DA R A LR +
Sbjct 121 DLLDAYRHNLLPKLQELPGFCSVSMLVDR-RLGRTVSVTSFENRDAAGLVRKHARVLRQQ 179
Query 209 RVRELGAEVLDVAEFELAIAHLRVPELV 236
+ +GA+++DVAE +L +AHL VPE V
Sbjct 180 FAQAMGAKIVDVAEMDLVLAHLHVPEAV 207
>gi|333991051|ref|YP_004523665.1| hypothetical protein JDM601_2411 [Mycobacterium sp. JDM601]
gi|333487019|gb|AEF36411.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=206
Score = 181 bits (458), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 94/207 (46%), Positives = 135/207 (66%), Gaps = 1/207 (0%)
Query 30 VYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLE 89
++AR+TTI A P +D GI HVR VVMP L ++DGC G+S+LVDR +GRCI TS+W +
Sbjct 1 MFARATTIHAHPSFLDEGITHVRGVVMPTLADMDGCAGMSMLVDRDAGRCIVTSSWLDED 60
Query 90 AMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLGR 149
+RAS + DRA +F +A + W+IA + RDH S A VR TWL+ P R
Sbjct 61 TLRASEAGAQQLCDRATEIFHATAEITRWEIAAVRRDHRSRRHAGVRVTWLRTDPASCER 120
Query 150 SLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAMARNRDRASELRSRR 209
++ Y+ +++P+L L GFCS +L+VD + RAVS +F+ AM +R + +R
Sbjct 121 LIDTYKLALIPQLADLHGFCSTTLLVDRSSG-RAVSSISFEDRAAMVASRAGEQTIWARA 179
Query 210 VRELGAEVLDVAEFELAIAHLRVPELV 236
+ ++GA+VL+VAEF+LAIAHL PE+V
Sbjct 180 INDVGADVLEVAEFDLAIAHLNAPEMV 206
>gi|119716601|ref|YP_923566.1| hypothetical protein Noca_2374 [Nocardioides sp. JS614]
gi|119537262|gb|ABL81879.1| conserved hypothetical protein [Nocardioides sp. JS614]
Length=206
Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 94/207 (46%), Positives = 134/207 (65%), Gaps = 1/207 (0%)
Query 30 VYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLE 89
++ARS T P + GI +VRD VMP L I+GC+G+S+L D ++G+ I TS+W + E
Sbjct 1 MHARSITFMGDPSRLAAGIDYVRDDVMPMLDAIEGCLGMSMLADPETGQVIVTSSWRSAE 60
Query 90 AMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLGR 149
+ AS + R RAA + W++A++HRDH + G+C R TWL++ +GR
Sbjct 61 DLDASDRLLTGSRARAAEIMGAPPEAAVWEVAVMHRDHRAAAGSCCRVTWLRLNHTDVGR 120
Query 150 SLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAMARNRDRASELRSRR 209
+E YRT++LP + L GFCSASL+VD A RA S +T+DS AM +RDR+ +R
Sbjct 121 GVELYRTALLPAMAELPGFCSASLLVDRRAG-RACSTTTYDSRAAMESSRDRSWAIRDAG 179
Query 210 VRELGAEVLDVAEFELAIAHLRVPELV 236
VRE G +V+DVAEF+L +AHL +PELV
Sbjct 180 VRESGVDVMDVAEFDLVLAHLHLPELV 206
>gi|326332594|ref|ZP_08198862.1| hypothetical protein NBCG_04038 [Nocardioidaceae bacterium Broad-1]
gi|325949595|gb|EGD41667.1| hypothetical protein NBCG_04038 [Nocardioidaceae bacterium Broad-1]
Length=200
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/208 (44%), Positives = 132/208 (64%), Gaps = 11/208 (5%)
Query 30 VYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLE 89
+YARSTT P ++D GI V++ P L I+GC G+S+LVDR+SGRCIATS+WE
Sbjct 1 MYARSTTFHGSPGNIDAGITFVKNEAGPMLDSIEGCRGLSMLVDRESGRCIATSSWEDEA 60
Query 90 AMRASVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLGR 149
MRAS ++ +RDR + G +++EW+I ++HR SH G C R +WL+ D +
Sbjct 61 TMRASDGQLRALRDRGKDILGGDMQIDEWEILVMHR---SHHGECARVSWLQGDVDAMA- 116
Query 150 SLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCST--FDSMDAMARNRDRASELRS 207
E +R +LPELE +GFCSASL+V+ + + C+T ++S AM +R A ++R+
Sbjct 117 --EIFRVGILPELEQTNGFCSASLLVNRSS---GLGCATTAWESRAAMEASRPAADDMRN 171
Query 208 RRVRELGAEVLDVAEFELAIAHLRVPEL 235
R + E++DV EF+LA AHL VPE+
Sbjct 172 RAASDARGEIVDVHEFDLAYAHLHVPEM 199
>gi|339295434|gb|AEJ47545.1| hypothetical protein CCDC5079_2355 [Mycobacterium tuberculosis
CCDC5079]
gi|339299054|gb|AEJ51164.1| hypothetical protein CCDC5180_2327 [Mycobacterium tuberculosis
CCDC5180]
Length=128
Score = 168 bits (426), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 81/129 (63%), Positives = 103/129 (80%), Gaps = 1/129 (0%)
Query 108 MFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLGRSLEFYRTSVLPELESLDG 167
MF G+ VEEW+IA +HRDH S EGACVRATW+KV DQ+ + +E+Y++SVLP++E LDG
Sbjct 1 MFGGTPAVEEWEIAAMHRDHRSAEGACVRATWVKVPADQVDQGIEYYKSSVLPQIEGLDG 60
Query 168 FCSASLMVDHPACRRAVSCSTFDSMDAMARNRDRASELRSRRVRELGAEVLDVAEFELAI 227
FCSASL+VD + RAVS +TFDS DAM RNRD+++ L++ +RE G E LD EFELA+
Sbjct 61 FCSASLLVDRTS-GRAVSSATFDSFDAMERNRDQSNALKATSLREAGGEELDECEFELAL 119
Query 228 AHLRVPELV 236
AHLRVPELV
Sbjct 120 AHLRVPELV 128
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/104 (30%), Positives = 60/104 (58%), Gaps = 5/104 (4%)
Query 23 RHGRGSIVYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIAT 82
R G+ V R+T ++ VD GI + + V+P ++ +DG SLLVDR SGR +++
Sbjct 21 RSAEGACV--RATWVKVPADQVDQGIEYYKSSVLPQIEGLDGFCSASLLVDRTSGRAVSS 78
Query 83 SAWETLEAMRASVERVAPIRDRAALMFAGSARVE--EWDIALLH 124
+ +++ +AM + ++ ++ +L AG ++ E+++AL H
Sbjct 79 ATFDSFDAMERNRDQSNALK-ATSLREAGGEELDECEFELALAH 121
>gi|41407173|ref|NP_960009.1| hypothetical protein MAP1075c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395524|gb|AAS03392.1| hypothetical protein MAP_1075c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=88
Score = 151 bits (381), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 73/88 (83%), Positives = 81/88 (93%), Gaps = 0/88 (0%)
Query 30 VYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLE 89
+YARSTTI+AQPLS+DIGIAH RDVVMPAL EIDGCVG+SLLVDRQSG CIATS+WE+++
Sbjct 1 MYARSTTIQAQPLSIDIGIAHARDVVMPALTEIDGCVGLSLLVDRQSGTCIATSSWESID 60
Query 90 AMRASVERVAPIRDRAALMFAGSARVEE 117
AMR S RVAPIRDRAALMF GSARVEE
Sbjct 61 AMRGSAARVAPIRDRAALMFDGSARVEE 88
>gi|258654035|ref|YP_003203191.1| hypothetical protein Namu_3909 [Nakamurella multipartita DSM
44233]
gi|258557260|gb|ACV80202.1| hypothetical protein Namu_3909 [Nakamurella multipartita DSM
44233]
Length=210
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/210 (38%), Positives = 121/210 (58%), Gaps = 7/210 (3%)
Query 27 GSIVYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWE 86
G V+AR+ + +P VD IA++RD +PA+ + CVG+S+L R G I ++AWE
Sbjct 4 GLTVFARTAVHQGRPDRVDACIAYLRDTAVPAILGMPTCVGMSVLASRTDGLAIISTAWE 63
Query 87 TLEAMRASVERVAPIRDRAA-LMFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPD 145
T M ASV ++ PIR++ A + G+A +EEW IA +HR + C R WL++
Sbjct 64 TKADMHASVVKIRPIREKTAEAIGGGTAELEEWQIAAMHRRQHAGHPVCARVIWLRLETA 123
Query 146 QLGRSLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAMARNRDRASEL 205
+ + + T+ LP L++ GFCS SLM++ P RRA ++S +AM R R +
Sbjct 124 GIDDLVSEFNTATLPALDATRGFCSTSLMIN-PDWRRAAVSIAYESTEAMDR---RINGA 179
Query 206 RSRRVRELGAEVLDVAEFELAIAHLRVPEL 235
RR+ E + V+ V EF+ + HLRVP+L
Sbjct 180 EGRRLLE--SNVIQVREFDEVMPHLRVPDL 207
>gi|256391447|ref|YP_003113011.1| hypothetical protein Caci_2252 [Catenulispora acidiphila DSM
44928]
gi|256357673|gb|ACU71170.1| hypothetical protein Caci_2252 [Catenulispora acidiphila DSM
44928]
Length=212
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/201 (25%), Positives = 89/201 (45%), Gaps = 10/201 (4%)
Query 30 VYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLE 89
++ RS I P V + + V + E G G+ + DR G+ + S WET +
Sbjct 1 MFVRSLYITCDPADVGPALDVIAKAVPGMMAEQSGFDGIGVFADRALGKILTGSWWETEQ 60
Query 90 AMRASVERVAPIRDRAALM---FAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQ 146
A++ S E+ +RDR M F + + A + G+ R + P
Sbjct 61 ALKNSDEQ---LRDRRVDMLARFVSTITTVNLEAAAFTPPASATSGS-FRLQRMMFEPAM 116
Query 147 LGRSLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAMARNRDRASELR 206
G + + LP L+++DGF ASL++D A A + F +A+A +R + +R
Sbjct 117 AGGIVRAFEEVGLPGLQAVDGFQGASLLLDR-AHNIAGVGTFFRDTEALAASRGPHAAIR 175
Query 207 SRRVREL--GAEVLDVAEFEL 225
++ G ++L + EF++
Sbjct 176 KAAFEQMKGGVQMLALEEFDV 196
>gi|254383707|ref|ZP_04999056.1| hypothetical protein SSAG_03358 [Streptomyces sp. Mg1]
gi|194342601|gb|EDX23567.1| hypothetical protein SSAG_03358 [Streptomyces sp. Mg1]
Length=118
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/82 (33%), Positives = 47/82 (58%), Gaps = 0/82 (0%)
Query 25 GRGSIVYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSA 84
GR S ++AR +T + P+ + ++ + ++ ++E+ G +GV LVDR +G+ + +
Sbjct 15 GRVSAMFARLSTYQGSPVPPEGDLSVHSEEIVKQVEEVAGYLGVYYLVDRATGKAVTLTL 74
Query 85 WETLEAMRASVERVAPIRDRAA 106
WE MRAS E A IR+ A
Sbjct 75 WEDEATMRASEEAAARIREETA 96
>gi|269836227|ref|YP_003318455.1| hypothetical protein Sthe_0194 [Sphaerobacter thermophilus DSM
20745]
gi|269785490|gb|ACZ37633.1| hypothetical protein Sthe_0194 [Sphaerobacter thermophilus DSM
20745]
Length=203
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/164 (28%), Positives = 71/164 (44%), Gaps = 5/164 (3%)
Query 30 VYARSTTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLE 89
+YAR +P +D A RD V+PA + G G+ +L D + + + + W T
Sbjct 1 MYARMMQALIKPDMLDTAAAISRDGVLPAAHQQPGFKGLIVLTDPATAKMVTITLWTTEA 60
Query 90 AMRA--SVERVAPIRDRAALMFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQL 147
MRA + + + R A A E + L HP+ A R +V P L
Sbjct 61 MMRAGEASDYLEQQLARMASALAAPPTQEALAVRALEAAHPNAMQA--RLLSYQVNPLLL 118
Query 148 GRSLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDS 191
+ +R VLP GF + L+++ P RA+S + +DS
Sbjct 119 DDFVGTFRDEVLPAARRERGFGTGLLLIN-PTAARAISLTLWDS 161
>gi|108805730|ref|YP_645667.1| antibiotic biosynthesis monooxygenase [Rubrobacter xylanophilus
DSM 9941]
gi|108766973|gb|ABG05855.1| Antibiotic biosynthesis monooxygenase [Rubrobacter xylanophilus
DSM 9941]
Length=93
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/60 (42%), Positives = 35/60 (59%), Gaps = 0/60 (0%)
Query 35 TTIEAQPLSVDIGIAHVRDVVMPALQEIDGCVGVSLLVDRQSGRCIATSAWETLEAMRAS 94
TT QP V+ I RD + PA +E G G LL DR++G+ +A + WET + +RAS
Sbjct 2 TTTRIQPGKVEEAIGIARDSIAPAAREQRGFGGFLLLADREAGKGLAITLWETEDDLRAS 61
>gi|325278849|ref|YP_004251391.1| TonB-dependent receptor plug [Odoribacter splanchnicus DSM 20712]
gi|324310658|gb|ADY31211.1| TonB-dependent receptor plug [Odoribacter splanchnicus DSM 20712]
Length=1130
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 23/68 (34%), Positives = 32/68 (48%), Gaps = 3/68 (4%)
Query 67 GVSLLVDRQSGRCIATSAWETLEAMRASVE--RVAPI-RDRAALMFAGSARVEEWDIALL 123
GV L Q GR S WET + + V R P+ D L F G++ V E+D +L
Sbjct 442 GVKLGTTLQVGRRDRNSYWETADPFKYVVRTTRTIPLYDDNGNLFFYGNSEVREFDFNIL 501
Query 124 HRDHPSHE 131
H +H+
Sbjct 502 HEQQNTHK 509
>gi|330921872|ref|XP_003299597.1| hypothetical protein PTT_10630 [Pyrenophora teres f. teres 0-1]
gi|311326645|gb|EFQ92302.1| hypothetical protein PTT_10630 [Pyrenophora teres f. teres 0-1]
Length=903
Score = 36.2 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 33/111 (30%), Positives = 50/111 (46%), Gaps = 10/111 (9%)
Query 51 VRDVVMP--ALQEID--GCVGVSLLVDRQSGRCIATSAWETLEAMRASVERVAPIRDRAA 106
V D+V P +QEI G V D Q G + +A +T + + +RD+A
Sbjct 343 VNDLVNPDNTVQEIQKLGGEAVGNKGDVQDGESVIKTAIDTYGRIDILINNAGILRDKA- 401
Query 107 LMFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLGRSLEFYRTS 157
FA E+WDI +H+ H +C +A W ++ + GR L TS
Sbjct 402 --FANMTD-EQWDI--IHKVHLFGTYSCTKAAWPYMLKQKYGRILNTTSTS 447
>gi|29827484|ref|NP_822118.1| type I polyketide synthase AVES 4 [Streptomyces avermitilis MA-4680]
gi|5902896|dbj|BAA84479.1| type I polyketide synthase AVES 4 [Streptomyces avermitilis]
gi|29604583|dbj|BAC68653.1| type I polyketide synthase AVES 4 [Streptomyces avermitilis MA-4680]
Length=4881
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 42/131 (33%), Positives = 61/131 (47%), Gaps = 19/131 (14%)
Query 64 GCVGVS----LLVDRQSGRCIATSAWETLEAMRASVERVAPIRDRAALMFAGSARVEEWD 119
G G+S L +D Q R + +WE LE RA ++ A + +FAG V + D
Sbjct 2710 GFFGISPREALAMDPQQ-RLMLEVSWEALE--RAGIDP-ATLHGSTTGVFAG---VSQQD 2762
Query 120 IA-LLHRDHPSHEGACVRATWLKVVPDQLGRSLEFYRTSVLPELESLDGFCSASLMVDHP 178
A LL R HEG + VV +L + F +V ++D CS+SL+ H
Sbjct 2763 YAELLRRGTQDHEGYALTGVSNSVVSGRLSYTFGFEGPAV-----TVDTACSSSLVALHL 2817
Query 179 ACR--RAVSCS 187
AC+ R+ CS
Sbjct 2818 ACQALRSGECS 2828
>gi|336276181|ref|XP_003352844.1| hypothetical protein SMAC_04958 [Sordaria macrospora k-hell]
gi|289622422|emb|CBI51044.1| unnamed protein product [Sordaria macrospora]
Length=804
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 22/86 (26%), Positives = 38/86 (45%), Gaps = 8/86 (9%)
Query 138 TWLKVVPDQLGRSLEFYRTSVLPELESLDGFCSASLMVDHPACRRAVSCSTFDSMDAMAR 197
TW + D+ GR++ +R + L F SL + ++ + D A+ R
Sbjct 77 TWKQFSGDKYGRNVGLFRNAYLTSPHGFLDFAQVSLGKARALVDKVINAQSLDEYRAVVR 136
Query 198 NRDRASELRSRRVRELGAEVLDVAEF 223
+ DR S++ R VLD+A+F
Sbjct 137 HLDRLSDILCR--------VLDMADF 154
>gi|238766992|dbj|BAH67487.1| polyketide synthase [Streptomyces stramineus]
Length=367
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 39/131 (30%), Positives = 60/131 (46%), Gaps = 19/131 (14%)
Query 64 GCVGVS----LLVDRQSGRCIATSAWETLEAMRASVERVAPIRDRAALMFAGSARVEEWD 119
G G+S L +D Q R + SAWETLE S + +R +F G + D
Sbjct 32 GFFGISPREALAMDPQQ-RLLLESAWETLEGANISPDT---LRAGQVGVFTG---LNSQD 84
Query 120 IA-LLHRDHPSHEGACVRATWLKVVPDQLGRSLEFYRTSVLPELESLDGFCSASLMVDHP 178
A L+ R+ +H G + + + ++ +L +V S+D CS+SL+ H
Sbjct 85 YASLVQREPDTHGGFVLTGSSSSIASGRIAYALGLEGPAV-----SVDTACSSSLVTLHL 139
Query 179 ACR--RAVSCS 187
AC+ RA CS
Sbjct 140 ACQALRAGECS 150
>gi|189210597|ref|XP_001941630.1| peroxisomal multifunctional enzyme type 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187977723|gb|EDU44349.1| peroxisomal multifunctional enzyme type 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length=903
Score = 35.0 bits (79), Expect = 9.8, Method: Composition-based stats.
Identities = 32/111 (29%), Positives = 50/111 (46%), Gaps = 10/111 (9%)
Query 51 VRDVVMP--ALQEID--GCVGVSLLVDRQSGRCIATSAWETLEAMRASVERVAPIRDRAA 106
V D+V P +QEI G V D Q G + +A +T + + +RD+A
Sbjct 343 VNDLVNPDNTVQEIQKLGGEAVGNKGDVQDGESVIKTAIDTYGRIDILINNAGILRDKA- 401
Query 107 LMFAGSARVEEWDIALLHRDHPSHEGACVRATWLKVVPDQLGRSLEFYRTS 157
FA ++WDI +H+ H +C +A W ++ + GR L TS
Sbjct 402 --FANMTD-DQWDI--IHKVHLFGTYSCTKAAWPYMLKQKYGRILNTTSTS 447
Lambda K H
0.322 0.135 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 319551017258
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40